Lcy05g014310 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy05g014310
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	auxin-responsive protein SAUR24-like
Location	Chr05: 17569215 .. 17569918 (+)
RNA-Seq Expression	Lcy05g014310
Synteny	Lcy05g014310

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTTCTACTGGCCCCATCCAACAGTTTTGGGAAGGTCTCTTTATCATCTATATAAATACACATTTGATGTGGTTTGGAAGCAACTACAAGCCTTCACATCTTCATTATAAGGAAACTTTCTTCTCTCGAAAACGCTTACTATCATCTTCTTGTGGCTTGAGATACAAGGATTTTGACCGTGCAAAAATGGGCCTTCGCCAGCTTCTTAAAAGAAATCAAGGAGTTTCAGCAATTCCCAAGGGTTATTGTGCGGTCTATGTTGGAGAGAGCCAAAAGAAGCGATTCTTGATCCCAGTTACTTACTTGAATCAACCATGTTTTCAAGAGTTGCTTTGTCAGACCGAAGAAGAATTCGGTTACCATCATCCCATGGGTGGTCTTACTATTAATTGCAGAGACGATGTCTTCACCGATCTCATCTCCCATCTGAATGATCTATGAGAGATGCACCAACATTTGTAGTATACAATCAAATCTTGTAGCATAGATCTGTAGCAAATAACCAAAACCATGTACATTTTTTTTTCATTTTCCTCATTTTTTTTGTTTCCTTTAGTGGGGAGTAAAAAGAATGTTTCCCTGCACAAGGAAATTACCAATGATGAAAATGAAATCCACAACTTTACTGAAAATTTAAGAGGTTCATTCCTTGAAACAATATTCTTTTTGTTTTATGGTAATTCTTCTATTCTCCATTTATG

mRNA sequence

ATGTCTTCTACTGGCCCCATCCAACAGTTTTGGGAAGGTCTCTTTATCATCTATATAAATACACATTTGATGTGGTTTGGAAGCAACTACAAGCCTTCACATCTTCATTATAAGGAAACTTTCTTCTCTCGAAAACGCTTACTATCATCTTCTTGTGGCTTGAGATACAAGGATTTTGACCGTGCAAAAATGGGCCTTCGCCAGCTTCTTAAAAGAAATCAAGGAGTTTCAGCAATTCCCAAGGGTTATTGTGCGGTCTATGTTGGAGAGAGCCAAAAGAAGCGATTCTTGATCCCAGTTACTTACTTGAATCAACCATGTTTTCAAGAGTTGCTTTGTCAGACCGAAGAAGAATTCGGTTACCATCATCCCATGGGTGGTCTTACTATTAATTGCAGAGACGATGTCTTCACCGATCTCATCTCCCATCTGAATGATCTATGAGAGATGCACCAACATTTGTAGTATACAATCAAATCTTGTAGCATAGATCTGTAGCAAATAACCAAAACCATGTACATTTTTTTTTCATTTTCCTCATTTTTTTTGTTTCCTTTAGTGGGGAGTAAAAAGAATGTTTCCCTGCACAAGGAAATTACCAATGATGAAAATGAAATCCACAACTTTACTGAAAATTTAAGAGGTTCATTCCTTGAAACAATATTCTTTTTGTTTTATGGTAATTCTTCTATTCTCCATTTATG

Coding sequence (CDS)

ATGTCTTCTACTGGCCCCATCCAACAGTTTTGGGAAGGTCTCTTTATCATCTATATAAATACACATTTGATGTGGTTTGGAAGCAACTACAAGCCTTCACATCTTCATTATAAGGAAACTTTCTTCTCTCGAAAACGCTTACTATCATCTTCTTGTGGCTTGAGATACAAGGATTTTGACCGTGCAAAAATGGGCCTTCGCCAGCTTCTTAAAAGAAATCAAGGAGTTTCAGCAATTCCCAAGGGTTATTGTGCGGTCTATGTTGGAGAGAGCCAAAAGAAGCGATTCTTGATCCCAGTTACTTACTTGAATCAACCATGTTTTCAAGAGTTGCTTTGTCAGACCGAAGAAGAATTCGGTTACCATCATCCCATGGGTGGTCTTACTATTAATTGCAGAGACGATGTCTTCACCGATCTCATCTCCCATCTGAATGATCTATGA

Protein sequence

MSSTGPIQQFWEGLFIIYINTHLMWFGSNYKPSHLHYKETFFSRKRLLSSSCGLRYKDFDRAKMGLRQLLKRNQGVSAIPKGYCAVYVGESQKKRFLIPVTYLNQPCFQELLCQTEEEFGYHHPMGGLTINCRDDVFTDLISHLNDL

Homology

[Close]

BLAST of Lcy05g014310 vs. ExPASy Swiss-Prot
Match: Q9FK62 (Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana OX=3702 GN=SAUR24 PE=2 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 2.5e-24
Identity = 52/87 (59.77%), Postives = 68/87 (78.16%), Query Frame = 0


Query: 59  FDRAKMGLRQLLKRNQGV-SAIPKGYCAVYVGESQKKRFLIPVTYLNQPCFQELLCQTEE 118
           F R+ +G +++L R+ G  SA PKG+ AVYVGESQKKR+L+PV+YLNQP FQ LL ++EE
Sbjct: 3   FVRSLLGAKKILSRSTGAGSAAPKGFLAVYVGESQKKRYLVPVSYLNQPSFQALLSKSEE 62

Query: 119 EFGYHHPMGGLTINCRDDVFTDLISHL 145
           EFG+ HPMGGLTI C +D F ++ S L
Sbjct: 63  EFGFDHPMGGLTIPCPEDTFINVTSRL 89

[Close]

BLAST of Lcy05g014310 vs. ExPASy Swiss-Prot
Match: Q9FJF7 (Auxin-responsive protein SAUR22 OS=Arabidopsis thaliana OX=3702 GN=SAUR22 PE=2 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 3.5e-23
Identity = 49/85 (57.65%), Postives = 67/85 (78.82%), Query Frame = 0


Query: 61  RAKMGLRQLLKRN-QGVSAIPKGYCAVYVGESQKKRFLIPVTYLNQPCFQELLCQTEEEF 120
           R+ +G +++L R+   VSA PKG+ AVYVGESQKKR+L+P++YLNQP FQ LL ++E+EF
Sbjct: 5   RSLLGAKKILSRSTAAVSAAPKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKSEDEF 64

Query: 121 GYHHPMGGLTINCRDDVFTDLISHL 145
           G+ HPMGGLTI C +D F ++ S L
Sbjct: 65  GFDHPMGGLTIPCHEDTFINVTSRL 89

[Close]

BLAST of Lcy05g014310 vs. ExPASy Swiss-Prot
Match: Q9FJG0 (Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana OX=3702 GN=SAUR20 PE=1 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 6.0e-23
Identity = 49/85 (57.65%), Postives = 66/85 (77.65%), Query Frame = 0


Query: 59  FDRAKMGLRQLLKRN-QGVSAIPKGYCAVYVGESQKKRFLIPVTYLNQPCFQELLCQTEE 118
           F R+ +G +++L R+    SA PKG+ AVYVGESQKKR+L+P++YLNQP FQ LL ++EE
Sbjct: 3   FVRSLLGAKKILSRSTTAASAAPKGFLAVYVGESQKKRYLVPISYLNQPSFQALLSKSEE 62

Query: 119 EFGYHHPMGGLTINCRDDVFTDLIS 143
           EFG+ HPMGGLTI C +D F ++ S
Sbjct: 63  EFGFDHPMGGLTIPCPEDTFINVTS 87

[Close]

BLAST of Lcy05g014310 vs. ExPASy Swiss-Prot
Match: Q9FJG1 (Auxin-responsive protein SAUR19 OS=Arabidopsis thaliana OX=3702 GN=SAUR19 PE=2 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 1.3e-22
Identity = 49/87 (56.32%), Postives = 67/87 (77.01%), Query Frame = 0


Query: 59  FDRAKMGLRQLLKRNQGV-SAIPKGYCAVYVGESQKKRFLIPVTYLNQPCFQELLCQTEE 118
           F R+ +G +++L R+    SA PKG+ AVYVGESQKKR+L+P++YL+QP FQ LL ++EE
Sbjct: 3   FVRSLLGAKKILSRSTAAGSAAPKGFLAVYVGESQKKRYLVPLSYLSQPSFQALLSKSEE 62

Query: 119 EFGYHHPMGGLTINCRDDVFTDLISHL 145
           EFG+ HPMGGLTI C +D F ++ S L
Sbjct: 63  EFGFAHPMGGLTIPCPEDTFINVTSRL 89

[Close]

BLAST of Lcy05g014310 vs. ExPASy Swiss-Prot
Match: Q9FJF9 (Auxin-responsive protein SAUR21 OS=Arabidopsis thaliana OX=3702 GN=SAUR21 PE=2 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 3.0e-22
Identity = 48/84 (57.14%), Postives = 66/84 (78.57%), Query Frame = 0


Query: 61  RAKMGLRQLLKRNQGVSAIPKGYCAVYVGESQKKRFLIPVTYLNQPCFQELLCQTEEEFG 120
           R+ +G +++L R+   SA PKG+ AVYVGESQKKR+L+P++YL+QP FQ LL ++EEEFG
Sbjct: 5   RSLLGAKKILSRST-ASAAPKGFLAVYVGESQKKRYLVPLSYLSQPSFQALLSKSEEEFG 64

Query: 121 YHHPMGGLTINCRDDVFTDLISHL 145
           + HPMGGLTI C +D F ++ S L
Sbjct: 65  FDHPMGGLTIPCPEDTFINVTSRL 87

[Close]

BLAST of Lcy05g014310 vs. ExPASy TrEMBL
Match: A0A6J1C4W2 (auxin-responsive protein SAUR24-like OS=Momordica charantia OX=3673 GN=LOC111007947 PE=3 SV=1)

HSP 1 Score: 169.9 bits (429), Expect = 8.2e-39
Identity = 75/84 (89.29%), Postives = 82/84 (97.62%), Query Frame = 0


Query: 64  MGLRQLLKRNQGVSAIPKGYCAVYVGESQKKRFLIPVTYLNQPCFQELLCQTEEEFGYHH 123
           MGLRQLLKRNQGVSA+PKGYCAVYVGESQKKRF+IP++YLNQPCFQELLCQ EEEFGY+H
Sbjct: 1   MGLRQLLKRNQGVSAVPKGYCAVYVGESQKKRFVIPISYLNQPCFQELLCQAEEEFGYYH 60

Query: 124 PMGGLTINCRDDVFTDLISHLNDL 148
           PMGGLTI+CRDD+FTDLIS LNDL
Sbjct: 61  PMGGLTIHCRDDIFTDLISRLNDL 84

[Close]

BLAST of Lcy05g014310 vs. ExPASy TrEMBL
Match: A0A0A0K4K1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G009080 PE=3 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 5.8e-37
Identity = 71/84 (84.52%), Postives = 82/84 (97.62%), Query Frame = 0


Query: 64  MGLRQLLKRNQGVSAIPKGYCAVYVGESQKKRFLIPVTYLNQPCFQELLCQTEEEFGYHH 123
           M L+ LLKRNQGVSA+PKGYCAVYVGESQKKRF+IP+TYLN+PCFQ+LLCQTEEEFGY+H
Sbjct: 1   MRLQHLLKRNQGVSAVPKGYCAVYVGESQKKRFVIPITYLNRPCFQQLLCQTEEEFGYYH 60

Query: 124 PMGGLTINCRDDVFTDLISHLNDL 148
           PMGGLTI+CRDD+FTDLIS++NDL
Sbjct: 61  PMGGLTIHCRDDIFTDLISNMNDL 84

[Close]

BLAST of Lcy05g014310 vs. ExPASy TrEMBL
Match: A0A5A7U363 (Auxin-induced protein 15A-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold76G00540 PE=3 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 6.5e-36
Identity = 68/84 (80.95%), Postives = 79/84 (94.05%), Query Frame = 0


Query: 64  MGLRQLLKRNQGVSAIPKGYCAVYVGESQKKRFLIPVTYLNQPCFQELLCQTEEEFGYHH 123
           M LR LLKRN+GVSA+PKGYCAVYVG+SQKKRF+IP+ YLN+PCFQELLCQTEEEFGY+H
Sbjct: 1   MRLRHLLKRNEGVSAVPKGYCAVYVGQSQKKRFMIPIAYLNRPCFQELLCQTEEEFGYYH 60

Query: 124 PMGGLTINCRDDVFTDLISHLNDL 148
           PMGGLTI+CRDD+F + ISH+NDL
Sbjct: 61  PMGGLTIHCRDDIFAEFISHMNDL 84

[Close]

BLAST of Lcy05g014310 vs. ExPASy TrEMBL
Match: A0A0A0K5U4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G009070 PE=3 SV=1)

HSP 1 Score: 153.7 bits (387), Expect = 6.0e-34
Identity = 69/84 (82.14%), Postives = 78/84 (92.86%), Query Frame = 0


Query: 64  MGLRQLLKRNQGVSAIPKGYCAVYVGESQKKRFLIPVTYLNQPCFQELLCQTEEEFGYHH 123
           M L  LLKR+QGVS+IPKGYCAVYVGESQKKRF+IP++YLNQPCFQELL QTEEEFGYHH
Sbjct: 1   MRLIHLLKRSQGVSSIPKGYCAVYVGESQKKRFIIPISYLNQPCFQELLSQTEEEFGYHH 60

Query: 124 PMGGLTINCRDDVFTDLISHLNDL 148
           PMGGLTI+C+D +FT+LIS LNDL
Sbjct: 61  PMGGLTIHCKDAIFTNLISRLNDL 84

[Close]

BLAST of Lcy05g014310 vs. ExPASy TrEMBL
Match: A0A0A0K5V1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G009120 PE=3 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 2.4e-30
Identity = 64/88 (72.73%), Postives = 75/88 (85.23%), Query Frame = 0


Query: 64  MGLRQLLKR-----NQGVSAIPKGYCAVYVGESQKKRFLIPVTYLNQPCFQELLCQTEEE 123
           MGLR+LL+R     NQ VS +PKGYCAVYVGE+QKKRF+IP+TYLNQPCFQ+LL QT EE
Sbjct: 1   MGLRRLLRRSSMNGNQRVSMVPKGYCAVYVGENQKKRFVIPITYLNQPCFQDLLNQTTEE 60

Query: 124 FGYHHPMGGLTINCRDDVFTDLISHLND 147
           F Y+HPMGGLT +C DD+F DLISHLN+
Sbjct: 61  FEYYHPMGGLTFHCSDDIFADLISHLNE 88

[Close]

BLAST of Lcy05g014310 vs. NCBI nr
Match: XP_022136192.1 (auxin-responsive protein SAUR24-like [Momordica charantia])

HSP 1 Score: 169.9 bits (429), Expect = 1.7e-38
Identity = 75/84 (89.29%), Postives = 82/84 (97.62%), Query Frame = 0


Query: 64  MGLRQLLKRNQGVSAIPKGYCAVYVGESQKKRFLIPVTYLNQPCFQELLCQTEEEFGYHH 123
           MGLRQLLKRNQGVSA+PKGYCAVYVGESQKKRF+IP++YLNQPCFQELLCQ EEEFGY+H
Sbjct: 1   MGLRQLLKRNQGVSAVPKGYCAVYVGESQKKRFVIPISYLNQPCFQELLCQAEEEFGYYH 60

Query: 124 PMGGLTINCRDDVFTDLISHLNDL 148
           PMGGLTI+CRDD+FTDLIS LNDL
Sbjct: 61  PMGGLTIHCRDDIFTDLISRLNDL 84

[Close]

BLAST of Lcy05g014310 vs. NCBI nr
Match: KAA0049710.1 (auxin-induced protein 15A-like [Cucumis melo var. makuwa])

HSP 1 Score: 160.2 bits (404), Expect = 1.3e-35
Identity = 68/84 (80.95%), Postives = 79/84 (94.05%), Query Frame = 0


Query: 64  MGLRQLLKRNQGVSAIPKGYCAVYVGESQKKRFLIPVTYLNQPCFQELLCQTEEEFGYHH 123
           M LR LLKRN+GVSA+PKGYCAVYVG+SQKKRF+IP+ YLN+PCFQELLCQTEEEFGY+H
Sbjct: 1   MRLRHLLKRNEGVSAVPKGYCAVYVGQSQKKRFMIPIAYLNRPCFQELLCQTEEEFGYYH 60

Query: 124 PMGGLTINCRDDVFTDLISHLNDL 148
           PMGGLTI+CRDD+F + ISH+NDL
Sbjct: 61  PMGGLTIHCRDDIFAEFISHMNDL 84

[Close]

BLAST of Lcy05g014310 vs. NCBI nr
Match: KAE8645660.1 (hypothetical protein Csa_020551 [Cucumis sativus])

HSP 1 Score: 154.8 bits (390), Expect = 5.6e-34
Identity = 68/79 (86.08%), Postives = 76/79 (96.20%), Query Frame = 0


Query: 64  MGLRQLLKRNQGVSAIPKGYCAVYVGESQKKRFLIPVTYLNQPCFQELLCQTEEEFGYHH 123
           MG+RQLLKRNQGVS IPKGYCAVYVGE+QKKRF+IP+T+LNQ CFQELL QTEE+FGYHH
Sbjct: 1   MGIRQLLKRNQGVSTIPKGYCAVYVGENQKKRFVIPITHLNQSCFQELLSQTEEKFGYHH 60

Query: 124 PMGGLTINCRDDVFTDLIS 143
           PMGGLTI+CRDD+FTDLIS
Sbjct: 61  PMGGLTIHCRDDIFTDLIS 79

[Close]

BLAST of Lcy05g014310 vs. NCBI nr
Match: XP_011658582.1 (auxin-responsive protein SAUR24 [Cucumis sativus])

HSP 1 Score: 153.7 bits (387), Expect = 1.2e-33
Identity = 69/84 (82.14%), Postives = 78/84 (92.86%), Query Frame = 0


Query: 64  MGLRQLLKRNQGVSAIPKGYCAVYVGESQKKRFLIPVTYLNQPCFQELLCQTEEEFGYHH 123
           M L  LLKR+QGVS+IPKGYCAVYVGESQKKRF+IP++YLNQPCFQELL QTEEEFGYHH
Sbjct: 1   MRLIHLLKRSQGVSSIPKGYCAVYVGESQKKRFIIPISYLNQPCFQELLSQTEEEFGYHH 60

Query: 124 PMGGLTINCRDDVFTDLISHLNDL 148
           PMGGLTI+C+D +FT+LIS LNDL
Sbjct: 61  PMGGLTIHCKDAIFTNLISRLNDL 84

[Close]

BLAST of Lcy05g014310 vs. NCBI nr
Match: KAG6572089.1 (Auxin-responsive protein SAUR23, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 136.7 bits (343), Expect = 1.6e-28
Identity = 62/87 (71.26%), Postives = 73/87 (83.91%), Query Frame = 0


Query: 64  MGLRQLLKR-----NQGVSAIPKGYCAVYVGESQKKRFLIPVTYLNQPCFQELLCQTEEE 123
           M L QLL+R      +GV+ +PKGYCAVYVGE QKKRF+IPVTYLNQPCFQ+LL Q E+E
Sbjct: 1   MRLLQLLRRPSTSTKEGVTVVPKGYCAVYVGEIQKKRFVIPVTYLNQPCFQDLLSQAEQE 60

Query: 124 FGYHHPMGGLTINCRDDVFTDLISHLN 146
           FGY+HPMGGLTI CR+D+FT+LIS LN
Sbjct: 61  FGYYHPMGGLTIQCREDIFTNLISQLN 87

[Close]

BLAST of Lcy05g014310 vs. TAIR 10
Match: AT5G18080.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 113.2 bits (282), Expect = 1.7e-25
Identity = 52/87 (59.77%), Postives = 68/87 (78.16%), Query Frame = 0


Query: 59  FDRAKMGLRQLLKRNQGV-SAIPKGYCAVYVGESQKKRFLIPVTYLNQPCFQELLCQTEE 118
           F R+ +G +++L R+ G  SA PKG+ AVYVGESQKKR+L+PV+YLNQP FQ LL ++EE
Sbjct: 3   FVRSLLGAKKILSRSTGAGSAAPKGFLAVYVGESQKKRYLVPVSYLNQPSFQALLSKSEE 62

Query: 119 EFGYHHPMGGLTINCRDDVFTDLISHL 145
           EFG+ HPMGGLTI C +D F ++ S L
Sbjct: 63  EFGFDHPMGGLTIPCPEDTFINVTSRL 89

[Close]

BLAST of Lcy05g014310 vs. TAIR 10
Match: AT5G18050.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 109.4 bits (272), Expect = 2.5e-24
Identity = 49/85 (57.65%), Postives = 67/85 (78.82%), Query Frame = 0


Query: 61  RAKMGLRQLLKRN-QGVSAIPKGYCAVYVGESQKKRFLIPVTYLNQPCFQELLCQTEEEF 120
           R+ +G +++L R+   VSA PKG+ AVYVGESQKKR+L+P++YLNQP FQ LL ++E+EF
Sbjct: 5   RSLLGAKKILSRSTAAVSAAPKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKSEDEF 64

Query: 121 GYHHPMGGLTINCRDDVFTDLISHL 145
           G+ HPMGGLTI C +D F ++ S L
Sbjct: 65  GFDHPMGGLTIPCHEDTFINVTSRL 89

[Close]

BLAST of Lcy05g014310 vs. TAIR 10
Match: AT5G18020.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 108.6 bits (270), Expect = 4.3e-24
Identity = 49/85 (57.65%), Postives = 66/85 (77.65%), Query Frame = 0


Query: 59  FDRAKMGLRQLLKRN-QGVSAIPKGYCAVYVGESQKKRFLIPVTYLNQPCFQELLCQTEE 118
           F R+ +G +++L R+    SA PKG+ AVYVGESQKKR+L+P++YLNQP FQ LL ++EE
Sbjct: 3   FVRSLLGAKKILSRSTTAASAAPKGFLAVYVGESQKKRYLVPISYLNQPSFQALLSKSEE 62

Query: 119 EFGYHHPMGGLTINCRDDVFTDLIS 143
           EFG+ HPMGGLTI C +D F ++ S
Sbjct: 63  EFGFDHPMGGLTIPCPEDTFINVTS 87

[Close]

BLAST of Lcy05g014310 vs. TAIR 10
Match: AT5G18010.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 107.5 bits (267), Expect = 9.6e-24
Identity = 49/87 (56.32%), Postives = 67/87 (77.01%), Query Frame = 0


Query: 59  FDRAKMGLRQLLKRNQGV-SAIPKGYCAVYVGESQKKRFLIPVTYLNQPCFQELLCQTEE 118
           F R+ +G +++L R+    SA PKG+ AVYVGESQKKR+L+P++YL+QP FQ LL ++EE
Sbjct: 3   FVRSLLGAKKILSRSTAAGSAAPKGFLAVYVGESQKKRYLVPLSYLSQPSFQALLSKSEE 62

Query: 119 EFGYHHPMGGLTINCRDDVFTDLISHL 145
           EFG+ HPMGGLTI C +D F ++ S L
Sbjct: 63  EFGFAHPMGGLTIPCPEDTFINVTSRL 89

[Close]

BLAST of Lcy05g014310 vs. TAIR 10
Match: AT5G18030.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 106.3 bits (264), Expect = 2.1e-23
Identity = 48/84 (57.14%), Postives = 66/84 (78.57%), Query Frame = 0


Query: 61  RAKMGLRQLLKRNQGVSAIPKGYCAVYVGESQKKRFLIPVTYLNQPCFQELLCQTEEEFG 120
           R+ +G +++L R+   SA PKG+ AVYVGESQKKR+L+P++YL+QP FQ LL ++EEEFG
Sbjct: 5   RSLLGAKKILSRST-ASAAPKGFLAVYVGESQKKRYLVPLSYLSQPSFQALLSKSEEEFG 64

Query: 121 YHHPMGGLTINCRDDVFTDLISHL 145
           + HPMGGLTI C +D F ++ S L
Sbjct: 65  FDHPMGGLTIPCPEDTFINVTSRL 87

The following BLAST results are available for this feature:

BLAST of Lcy05g014310 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FK62	2.5e-24	59.77	Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana OX=3702 GN=SAUR24 PE=2 S...	[more]
Q9FJF7	3.5e-23	57.65	Auxin-responsive protein SAUR22 OS=Arabidopsis thaliana OX=3702 GN=SAUR22 PE=2 S...	[more]
Q9FJG0	6.0e-23	57.65	Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana OX=3702 GN=SAUR20 PE=1 S...	[more]
Q9FJG1	1.3e-22	56.32	Auxin-responsive protein SAUR19 OS=Arabidopsis thaliana OX=3702 GN=SAUR19 PE=2 S...	[more]
Q9FJF9	3.0e-22	57.14	Auxin-responsive protein SAUR21 OS=Arabidopsis thaliana OX=3702 GN=SAUR21 PE=2 S...	[more]

BLAST of Lcy05g014310 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C4W2	8.2e-39	89.29	auxin-responsive protein SAUR24-like OS=Momordica charantia OX=3673 GN=LOC111007...	[more]
A0A0A0K4K1	5.8e-37	84.52	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G009080 PE=3 SV=1	[more]
A0A5A7U363	6.5e-36	80.95	Auxin-induced protein 15A-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_s...	[more]
A0A0A0K5U4	6.0e-34	82.14	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G009070 PE=3 SV=1	[more]
A0A0A0K5V1	2.4e-30	72.73	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G009120 PE=3 SV=1	[more]

BLAST of Lcy05g014310 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022136192.1	1.7e-38	89.29	auxin-responsive protein SAUR24-like [Momordica charantia]	[more]
KAA0049710.1	1.3e-35	80.95	auxin-induced protein 15A-like [Cucumis melo var. makuwa]	[more]
KAE8645660.1	5.6e-34	86.08	hypothetical protein Csa_020551 [Cucumis sativus]	[more]
XP_011658582.1	1.2e-33	82.14	auxin-responsive protein SAUR24 [Cucumis sativus]	[more]
KAG6572089.1	1.6e-28	71.26	Auxin-responsive protein SAUR23, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of Lcy05g014310 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G18080.1	1.7e-25	59.77	SAUR-like auxin-responsive protein family	[more]
AT5G18050.1	2.5e-24	57.65	SAUR-like auxin-responsive protein family	[more]
AT5G18020.1	4.3e-24	57.65	SAUR-like auxin-responsive protein family	[more]
AT5G18010.1	9.6e-24	56.32	SAUR-like auxin-responsive protein family	[more]
AT5G18030.1	2.1e-23	57.14	SAUR-like auxin-responsive protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003676	Small auxin-up RNA	PFAM	PF02519	Auxin_inducible	coord: 73..143 e-value: 1.5E-22 score: 79.6
None	No IPR available	PANTHER	PTHR31929	SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED	coord: 68..144
None	No IPR available	PANTHER	PTHR31929:SF40	SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY	coord: 68..144

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy05g014310.1	Lcy05g014310.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009733	response to auxin