Lcy04g010940 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy04g010940
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	CASP-like protein
Location	Chr04: 42303987 .. 42306525 (-)
RNA-Seq Expression	Lcy04g010940
Synteny	Lcy04g010940

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTTCTCGGAGCTCTACTTCGCCTTCTTACCAAAGTGGCGAGCTGTGTCTGTTTTCGGTGGAGAAGATGACGAATTCATGGACTTTGGATCTTCCCTTCGCTCTCTGATTCTAAACAATCGAAGCCTTCAGCTCATAAGCTAAACTTCTCTATCTTTCTTTATGTGCTGTACTGGCTCAGCTGCGACCGGTTAGGGTTCGGAAATATGGAGTGAGTGTAAAAGAGCTTTTGTTTCACCTCAGTGATTGAACAGTTGGATCGCTGTGGACCGCGATGAACGTGAGCCGGCCGTCGGTGCATCCAGTGGAGGCGCCACCACTAACGGAAGGAGCGGTACACAATGCGCCGAGAGTCAGGATGAAGGATGTGCAGGGCATGCCTGGTACACCGGGTGGACTTGCTCTTCGTCTCCTTCAGTTCGTATTTGCTGCAGTTTCTCTGTGTGTTATGGCTACCACCAGTGATTTCCCCTCAGTCACGGCGTTTCGGTACGTAATTCTTGAATTTTTTTTGTTTCATAGTGTCAGGTTCTGTGTAATTTTTCGATGTTGTGATTGTGATGATCTTCAAATATTCTCTTCGCGGCGTTACAGAGTCAATGAACTGAAATAAGGATGTTGATTAAATTAAGATATATTTAGCGTGATTTGGACGTCGTTCAGAATATTTTATCCGTGAAATAAGGATGTTGATTAAATTAAGATAATGCTTGTTTCTTCGTCTTTTCTTGCTGAAGATTTCGCTCAAGTACAATTGTTTCTTAATTGTGCTTTGTCCAATATATTTACCGATGAACCTTAAACTCCGTTGATGGTGATAGCAATAACTTGTATTGCACTATGGCTAAGGTCTTGTGTTTTCAATATGTTGTGAACTTGTGAGTCGCGATGGAGCCCTCAGGCATAGAGGGAAGTGCATATAGACACGTAGAAAAGTTGTCGTTATAACTGTCGAATGTGTTCTACAAGAAGGAAACCAAGAGGCTTGTGTCATTCTGTATTTTGTTTAATGGTTCGAGGGATTTTATTATTGTTAGCGACTAGTGTTGTGTTATTTTTCCAACAGAGTGGACAACACTACACTCTTGAAATCACTATTTTGTTTCAGAACACAGCACATTGTTGTTGGTTGATTATTTATCCCATAATTAAGTTCATATTTCCAATGAAAAAAAAAATGTATTTTATACGTTTCAGTTCCAATGACACTGCTTGTGGCCAAGAGTTGTACAGGTTTATAGTTTACTGAGTTTGTTCTGTATTTTTTTTTCTAATTTTCATCATTTTATTAATACCAATAGAGTTTTATTTAACCTTGCTTGGTTTTTGAAAGTTCGGAGGATATGTCATTTTCTGCTCCTGTATGTTTTTGTTTAATACCAATAAGTTAGTTTCTCTTACAAAAGAAGTTTGTTTTGTTGGATGATGTTATTCGCTGTTAAAACCTGTGATTTTAAGATATCCTATATGTTTGATCCTTCAACTTCATGTTTAATTGTTTTCTTGTTCATATGGAACTATCGCCTTTTTATTTCCTCTCAGATATCTTGTTGCTGCTGTTGGCTTGCAATGCTTGTGGAGCTTTTCATTGGCAATAGTTGATGCATATGCCTTGTTAGTAAGGCGAAGCTTGCGGAACTACACAATGGTTGGTTTGTTCACTGTTGGAGATGCGGTAAGAATATTTTGCATGCTACACTTCCAAGCATACGTAGTAGATCTGTATGCATCTTCTTTTTGTTATCTGATATGTCATGTGCAATCCAGGAGCTTGTTTAAGTTGCATAATTGTTGTAAAATAGGTCGCAAACTCTGAGATTGATGTTTAGTTTTTACTGGAAGCTAATTTTATGTTTGGTTTGCAAGAATGAGAATCCGAATGAAACTTCTTGTTTCATTGTTTGGTTTTCCTATTTGTGAATTGTAATAGAATAAGCATCCCATTGGAATGTGGAGTCTAGCATTTTGAAGGAATGAGCCTGATATGTTATTCAACACTATGTCATATTAATGTGTTTTTCATTGATATATTATTCTTTGGTGATCACAATTTTTACACATTTAATATAATTATGTTAATTTCAATTGATGTTCTTATAATGAAAACCAATTTATTTTACTAAATTTCTTAAGGTCAATTCGTATTTATAATTGTTAATACAAATACCCAACTGTTCCCCCCTGCAGGTTACGTCCACCCTTACATTTTCTGCTGCATGTTCATCAGCTGGGATTACTGTTCTGATAGGCAATGATCTTAATAAGTGTGGCGTGAACCACTGTGCACAGTTCGAGTCTGCCACTGCAATGGCCTTCATTAGCTGGTTTGCTGTTTCACCTTCCTTTCTCTTGAACTTTTGGTCGTTGGCTTCTCGGTGAGATTCCATCGCGAGAGAGTTTGCTTCTTTTAGTTTTTGTCTTACCTACTACTTTTTGCTTCTAAATTATAGAGCACAAATTTGGAAATTTTGATGTACATATGTAGATTTTTGCTGGGCTTGATTGAGAATTGAGAAAATAATCAGTGAATAAAATCACTT

mRNA sequence

CTTTCTCGGAGCTCTACTTCGCCTTCTTACCAAAGTGGCGAGCTGTGTCTGTTTTCGGTGGAGAAGATGACGAATTCATGGACTTTGGATCTTCCCTTCGCTCTCTGATTCTAAACAATCGAAGCCTTCAGCTCATAAGCTAAACTTCTCTATCTTTCTTTATGTGCTGTACTGGCTCAGCTGCGACCGGTTAGGGTTCGGAAATATGGAGTGAGTGTAAAAGAGCTTTTGTTTCACCTCAGTGATTGAACAGTTGGATCGCTGTGGACCGCGATGAACGTGAGCCGGCCGTCGGTGCATCCAGTGGAGGCGCCACCACTAACGGAAGGAGCGGTACACAATGCGCCGAGAGTCAGGATGAAGGATGTGCAGGGCATGCCTGGTACACCGGGTGGACTTGCTCTTCGTCTCCTTCAGTTCGTATTTGCTGCAGTTTCTCTGTGTGTTATGGCTACCACCAGTGATTTCCCCTCAGTCACGGCGTTTCGATATCTTGTTGCTGCTGTTGGCTTGCAATGCTTGTGGAGCTTTTCATTGGCAATAGTTGATGCATATGCCTTGTTAGTAAGGCGAAGCTTGCGGAACTACACAATGGTTGGTTTGTTCACTGTTGGAGATGCGGTTACGTCCACCCTTACATTTTCTGCTGCATGTTCATCAGCTGGGATTACTGTTCTGATAGGCAATGATCTTAATAAGTGTGGCGTGAACCACTGTGCACAGTTCGAGTCTGCCACTGCAATGGCCTTCATTAGCTGGTTTGCTGTTTCACCTTCCTTTCTCTTGAACTTTTGGTCGTTGGCTTCTCGGTGAGATTCCATCGCGAGAGAGTTTGCTTCTTTTAGTTTTTGTCTTACCTACTACTTTTTGCTTCTAAATTATAGAGCACAAATTTGGAAATTTTGATGTACATATGTAGATTTTTGCTGGGCTTGATTGAGAATTGAGAAAATAATCAGTGAATAAAATCACTT

Coding sequence (CDS)

ATGAACGTGAGCCGGCCGTCGGTGCATCCAGTGGAGGCGCCACCACTAACGGAAGGAGCGGTACACAATGCGCCGAGAGTCAGGATGAAGGATGTGCAGGGCATGCCTGGTACACCGGGTGGACTTGCTCTTCGTCTCCTTCAGTTCGTATTTGCTGCAGTTTCTCTGTGTGTTATGGCTACCACCAGTGATTTCCCCTCAGTCACGGCGTTTCGATATCTTGTTGCTGCTGTTGGCTTGCAATGCTTGTGGAGCTTTTCATTGGCAATAGTTGATGCATATGCCTTGTTAGTAAGGCGAAGCTTGCGGAACTACACAATGGTTGGTTTGTTCACTGTTGGAGATGCGGTTACGTCCACCCTTACATTTTCTGCTGCATGTTCATCAGCTGGGATTACTGTTCTGATAGGCAATGATCTTAATAAGTGTGGCGTGAACCACTGTGCACAGTTCGAGTCTGCCACTGCAATGGCCTTCATTAGCTGGTTTGCTGTTTCACCTTCCTTTCTCTTGAACTTTTGGTCGTTGGCTTCTCGGTGA

Protein sequence

MNVSRPSVHPVEAPPLTEGAVHNAPRVRMKDVQGMPGTPGGLALRLLQFVFAAVSLCVMATTSDFPSVTAFRYLVAAVGLQCLWSFSLAIVDAYALLVRRSLRNYTMVGLFTVGDAVTSTLTFSAACSSAGITVLIGNDLNKCGVNHCAQFESATAMAFISWFAVSPSFLLNFWSLASR

Homology

[Close]

BLAST of Lcy04g010940 vs. ExPASy Swiss-Prot
Match: Q9SKN3 (CASP-like protein 5A2 OS=Arabidopsis thaliana OX=3702 GN=At2g28370 PE=2 SV=1)

HSP 1 Score: 251.9 bits (642), Expect = 5.4e-66
Identity = 127/179 (70.95%), Postives = 145/179 (81.01%), Query Frame = 0


Query: 1   MNVSRPSVHPVEAPPLTEGAVHNAPRVRMKDVQGMPGTPGGLALRLLQFVFAAVSLCVMA 60
           MNVS  SVHPVE PP     V N PRVRM D++GMPGT  GLALR  QF+FAA +LCVMA
Sbjct: 1   MNVSHASVHPVEDPPAAATEVENPPRVRMDDMEGMPGTLLGLALRFFQFLFAAAALCVMA 60

Query: 61  TTSDFPSVTAFRYLVAAVGLQCLWSFSLAIVDAYALLVRRSLRNYTMVGLFTVGDAVTST 120
           +TSDFPSVTAF YLVAA GLQ LWS +LA+VD YA++V+RSL+N  +V LF +GD VTST
Sbjct: 61  STSDFPSVTAFCYLVAATGLQSLWSLALAMVDVYAIMVKRSLQNRRLVSLFAIGDGVTST 120

Query: 121 LTFSAACSSAGITVLIGNDLNKCGVNHCAQFESATAMAFISWFAVSPSFLLNFWSLASR 180
           LTF+AAC+SAGITVLI NDLN C  NHC QFE++TA+AFISWFA  PSFL NFWSLASR
Sbjct: 121 LTFAAACASAGITVLIDNDLNSCAQNHCVQFETSTALAFISWFAALPSFLFNFWSLASR 179

[Close]

BLAST of Lcy04g010940 vs. ExPASy Swiss-Prot
Match: P0DI70 (CASP-like protein 5A1 OS=Ginkgo biloba OX=3311 GN=gba_locus_10451 PE=3 SV=1)

HSP 1 Score: 245.7 bits (626), Expect = 3.9e-64
Identity = 126/179 (70.39%), Postives = 145/179 (81.01%), Query Frame = 0


Query: 1   MNVSRPSVHPVEAPPLTEGAVHNAPRVRMKDVQGMPGTPGGLALRLLQFVFAAVSLCVMA 60
           MN S P+VHPVEAPP     VH+APRVRMKD QGMPGT GGLALRL QF FA V+  +M 
Sbjct: 1   MNPSHPAVHPVEAPPTD---VHHAPRVRMKDYQGMPGTLGGLALRLGQFCFAVVAFSIML 60

Query: 61  TTSDFPSVTAFRYLVAAVGLQCLWSFSLAIVDAYALLVRRSLRNYTMVGLFTVGDAVTST 120
           +T DF +VTAF YLVAA  LQCLWS +LA++D YALLV+RSLRN  +V LF VGD VT+T
Sbjct: 61  STDDFSTVTAFCYLVAATVLQCLWSLALAVIDGYALLVKRSLRNSLVVSLFVVGDGVTAT 120

Query: 121 LTFSAACSSAGITVLIGNDLNKCGVNHCAQFESATAMAFISWFAVSPSFLLNFWSLASR 180
           LTF+AAC+SAGITVLIGNDL +C  NHC ++E+ATAMAF+SWF VSPSFLL FW LASR
Sbjct: 121 LTFAAACASAGITVLIGNDLRECDQNHCGKYETATAMAFLSWFMVSPSFLLTFWLLASR 176

[Close]

BLAST of Lcy04g010940 vs. ExPASy Swiss-Prot
Match: P0DI68 (CASP-like protein 5A1 OS=Brachypodium distachyon OX=15368 PE=2 SV=1)

HSP 1 Score: 238.8 bits (608), Expect = 4.7e-62
Identity = 124/179 (69.27%), Postives = 143/179 (79.89%), Query Frame = 0


Query: 1   MNVSRPSVHPVEAPPLTEGAVHNAPRVRMKDVQGMPGTPGGLALRLLQFVFAAVSLCVMA 60
           M  SRP+VHPVEAPP T+  V     V MKD+ GMPGT GGL LR+ QFVFA V+L VMA
Sbjct: 1   MFASRPAVHPVEAPPPTD-PVEQPTGVLMKDLPGMPGTAGGLGLRVAQFVFAGVALAVMA 60

Query: 61  TTSDFPSVTAFRYLVAAVGLQCLWSFSLAIVDAYALLVRRSLRNYTMVGLFTVGDAVTST 120
           +TSDFPSVTAF YLVAA  +QCLWSFSLAIVD YALLV+R LRN   V LF +GD +T+ 
Sbjct: 61  STSDFPSVTAFCYLVAATIMQCLWSFSLAIVDIYALLVKRCLRNRRAVCLFAIGDGITAA 120

Query: 121 LTFSAACSSAGITVLIGNDLNKCGVNHCAQFESATAMAFISWFAVSPSFLLNFWSLASR 180
           LTF AACSSAGITVLI NDLN C  NHC  F++ATA+AF+SWFA++PSFLLNFWS+A+R
Sbjct: 121 LTFGAACSSAGITVLIDNDLNICAENHCGSFKTATALAFMSWFALTPSFLLNFWSMAAR 178

[Close]

BLAST of Lcy04g010940 vs. ExPASy Swiss-Prot
Match: Q10Q78 (CASP-like protein 5A1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0206600 PE=2 SV=1)

HSP 1 Score: 238.4 bits (607), Expect = 6.2e-62
Identity = 127/179 (70.95%), Postives = 145/179 (81.01%), Query Frame = 0


Query: 1   MNVSRPSVHPVEAPPLTEGAVHNAPR-VRMKDVQGMPGTPGGLALRLLQFVFAAVSLCVM 60
           M  SRP+VHPVEAPP  + A    PR V MKD+ GMPGT GGL LRL QF FAAV+L VM
Sbjct: 1   MFASRPAVHPVEAPPPPDPA--EQPRGVLMKDLPGMPGTAGGLGLRLAQFAFAAVALAVM 60

Query: 61  ATTSDFPSVTAFRYLVAAVGLQCLWSFSLAIVDAYALLVRRSLRNYTMVGLFTVGDAVTS 120
           A+T+DFPSVT+F +LVAA  LQCLWSFSLAIVD YALLV+R LRN   V LF +GD +T+
Sbjct: 61  ASTNDFPSVTSFCFLVAAAILQCLWSFSLAIVDIYALLVKRCLRNRRAVCLFAIGDGITA 120

Query: 121 TLTFSAACSSAGITVLIGNDLNKCGVNHCAQFESATAMAFISWFAVSPSFLLNFWSLAS 179
            LTFSAAC+S+GITVLI NDL+ C  NHCA FESATAMAF+SWFA+SPSFLLNFWS+AS
Sbjct: 121 ALTFSAACASSGITVLIDNDLDLCSENHCASFESATAMAFLSWFALSPSFLLNFWSMAS 177

[Close]

BLAST of Lcy04g010940 vs. ExPASy Swiss-Prot
Match: Q6NPF8 (CASP-like protein 5A1 OS=Arabidopsis thaliana OX=3702 GN=At2g37200 PE=2 SV=1)

HSP 1 Score: 236.1 bits (601), Expect = 3.1e-61
Identity = 129/180 (71.67%), Postives = 149/180 (82.78%), Query Frame = 0


Query: 1   MNVSRPSVHPVEAPPL--TEGAVHNAPRVRMKDVQGMPGTPGGLALRLLQFVFAAVSLCV 60
           MNVSRP++HPV+A P+  T GA+ + P VRMKDVQGMPGT GGL LRL QFV A +S+ V
Sbjct: 2   MNVSRPAIHPVDALPVAPTAGAI-DRPPVRMKDVQGMPGTTGGLILRLSQFVPALISVSV 61

Query: 61  MATTSDFPSVTAFRYLVAAVGLQCLWSFSLAIVDAYALLVRRSLRNYTMVGLFTVGDAVT 120
           M TTSDF S TAF  LV AV LQ LWS SL I+DAYALLVRRSLRN+++V  FT+GD VT
Sbjct: 62  MVTTSDFRSATAFCCLVLAVSLQSLWSLSLFIIDAYALLVRRSLRNHSVVQCFTIGDGVT 121

Query: 121 STLTFSAACSSAGITVLIGNDLNKCGVNHCAQFESATAMAFISWFAVSPSFLLNFWSLAS 179
           STLTF+AA +SAGITVLI NDL +C VNHC +FE+ATAMAFISWFAVSPSF+LNFWSLA+
Sbjct: 122 STLTFAAASASAGITVLI-NDLGQCNVNHCTRFETATAMAFISWFAVSPSFILNFWSLAT 179

[Close]

BLAST of Lcy04g010940 vs. ExPASy TrEMBL
Match: A0A6J1IRK7 (CASP-like protein OS=Cucurbita maxima OX=3661 GN=LOC111478720 PE=3 SV=1)

HSP 1 Score: 334.3 bits (856), Expect = 3.0e-88
Identity = 168/179 (93.85%), Postives = 175/179 (97.77%), Query Frame = 0


Query: 1   MNVSRPSVHPVEAPPLTEGAVHNAPRVRMKDVQGMPGTPGGLALRLLQFVFAAVSLCVMA 60
           MNVSRPSVHPVEAPPLTEGAVHN PRVRMKDVQGMPGT GGLALRLLQF+FAAVSLCVMA
Sbjct: 1   MNVSRPSVHPVEAPPLTEGAVHNGPRVRMKDVQGMPGTTGGLALRLLQFIFAAVSLCVMA 60

Query: 61  TTSDFPSVTAFRYLVAAVGLQCLWSFSLAIVDAYALLVRRSLRNYTMVGLFTVGDAVTST 120
           TTSDFPSVTAFRYLVAA GLQCLWSFSLA+VDAYALLVRRSL+N ++VGLFT+GDA+TST
Sbjct: 61  TTSDFPSVTAFRYLVAAAGLQCLWSFSLAVVDAYALLVRRSLQNCSIVGLFTIGDAITST 120

Query: 121 LTFSAACSSAGITVLIGNDLNKCGVNHCAQFESATAMAFISWFAVSPSFLLNFWSLASR 180
           LTFSAACSSAGITVLIGNDLNKCGVNHCAQFESATAMAFISWFAVSPSFLLNFWSLASR
Sbjct: 121 LTFSAACSSAGITVLIGNDLNKCGVNHCAQFESATAMAFISWFAVSPSFLLNFWSLASR 179

[Close]

BLAST of Lcy04g010940 vs. ExPASy TrEMBL
Match: A0A5A7U0S9 (CASP-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold432G00210 PE=3 SV=1)

HSP 1 Score: 334.0 bits (855), Expect = 4.0e-88
Identity = 170/179 (94.97%), Postives = 175/179 (97.77%), Query Frame = 0


Query: 1   MNVSRPSVHPVEAPPLTEGAVHNAPRVRMKDVQGMPGTPGGLALRLLQFVFAAVSLCVMA 60
           MNVSRPSVHPVEAPPLTEGAVHN PRVRMKDVQGMPGT GGLALRLLQFVFA VSLCVM+
Sbjct: 1   MNVSRPSVHPVEAPPLTEGAVHNGPRVRMKDVQGMPGTLGGLALRLLQFVFATVSLCVMS 60

Query: 61  TTSDFPSVTAFRYLVAAVGLQCLWSFSLAIVDAYALLVRRSLRNYTMVGLFTVGDAVTST 120
           TTSDFPSVTAFRYLVAAVGLQCLWSFSLA+VDAYALLVRRSLRN ++VGLFT+GDAVTST
Sbjct: 61  TTSDFPSVTAFRYLVAAVGLQCLWSFSLAVVDAYALLVRRSLRNCSIVGLFTLGDAVTST 120

Query: 121 LTFSAACSSAGITVLIGNDLNKCGVNHCAQFESATAMAFISWFAVSPSFLLNFWSLASR 180
           LTFSAACSSAGITVLIGNDLNKCGVNHCAQFESATAMAFISWFAVSPSFLLNFWSLASR
Sbjct: 121 LTFSAACSSAGITVLIGNDLNKCGVNHCAQFESATAMAFISWFAVSPSFLLNFWSLASR 179

[Close]

BLAST of Lcy04g010940 vs. ExPASy TrEMBL
Match: A0A0A0KF35 (CASP-like protein OS=Cucumis sativus OX=3659 GN=Csa_6G445220 PE=3 SV=1)

HSP 1 Score: 334.0 bits (855), Expect = 4.0e-88
Identity = 170/179 (94.97%), Postives = 175/179 (97.77%), Query Frame = 0


Query: 1   MNVSRPSVHPVEAPPLTEGAVHNAPRVRMKDVQGMPGTPGGLALRLLQFVFAAVSLCVMA 60
           MNVSRPSVHPVEAPPLTEGAVHN PRVRMKDVQGMPGT GGLALRLLQFVFA VSLCVM+
Sbjct: 1   MNVSRPSVHPVEAPPLTEGAVHNGPRVRMKDVQGMPGTLGGLALRLLQFVFATVSLCVMS 60

Query: 61  TTSDFPSVTAFRYLVAAVGLQCLWSFSLAIVDAYALLVRRSLRNYTMVGLFTVGDAVTST 120
           TTSDFPSVTAFRYLVAAVGLQCLWSFSLA+VDAYALLVRRSLRN ++VGLFT+GDAVTST
Sbjct: 61  TTSDFPSVTAFRYLVAAVGLQCLWSFSLAVVDAYALLVRRSLRNCSIVGLFTLGDAVTST 120

Query: 121 LTFSAACSSAGITVLIGNDLNKCGVNHCAQFESATAMAFISWFAVSPSFLLNFWSLASR 180
           LTFSAACSSAGITVLIGNDLNKCGVNHCAQFESATAMAFISWFAVSPSFLLNFWSLASR
Sbjct: 121 LTFSAACSSAGITVLIGNDLNKCGVNHCAQFESATAMAFISWFAVSPSFLLNFWSLASR 179

[Close]

BLAST of Lcy04g010940 vs. ExPASy TrEMBL
Match: A0A1S3BLL2 (CASP-like protein OS=Cucumis melo OX=3656 GN=LOC103491180 PE=3 SV=1)

HSP 1 Score: 334.0 bits (855), Expect = 4.0e-88
Identity = 170/179 (94.97%), Postives = 175/179 (97.77%), Query Frame = 0


Query: 1   MNVSRPSVHPVEAPPLTEGAVHNAPRVRMKDVQGMPGTPGGLALRLLQFVFAAVSLCVMA 60
           MNVSRPSVHPVEAPPLTEGAVHN PRVRMKDVQGMPGT GGLALRLLQFVFA VSLCVM+
Sbjct: 1   MNVSRPSVHPVEAPPLTEGAVHNGPRVRMKDVQGMPGTLGGLALRLLQFVFATVSLCVMS 60

Query: 61  TTSDFPSVTAFRYLVAAVGLQCLWSFSLAIVDAYALLVRRSLRNYTMVGLFTVGDAVTST 120
           TTSDFPSVTAFRYLVAAVGLQCLWSFSLA+VDAYALLVRRSLRN ++VGLFT+GDAVTST
Sbjct: 61  TTSDFPSVTAFRYLVAAVGLQCLWSFSLAVVDAYALLVRRSLRNCSIVGLFTLGDAVTST 120

Query: 121 LTFSAACSSAGITVLIGNDLNKCGVNHCAQFESATAMAFISWFAVSPSFLLNFWSLASR 180
           LTFSAACSSAGITVLIGNDLNKCGVNHCAQFESATAMAFISWFAVSPSFLLNFWSLASR
Sbjct: 121 LTFSAACSSAGITVLIGNDLNKCGVNHCAQFESATAMAFISWFAVSPSFLLNFWSLASR 179

[Close]

BLAST of Lcy04g010940 vs. ExPASy TrEMBL
Match: A0A6J1EDZ3 (CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111433327 PE=3 SV=1)

HSP 1 Score: 332.8 bits (852), Expect = 8.9e-88
Identity = 167/179 (93.30%), Postives = 174/179 (97.21%), Query Frame = 0


Query: 1   MNVSRPSVHPVEAPPLTEGAVHNAPRVRMKDVQGMPGTPGGLALRLLQFVFAAVSLCVMA 60
           MNVSRPSVHPVEAPPLTEGAVHN PRVRMKDVQGMPGT GGLALRLLQF+FA VSLCVMA
Sbjct: 1   MNVSRPSVHPVEAPPLTEGAVHNGPRVRMKDVQGMPGTTGGLALRLLQFIFAVVSLCVMA 60

Query: 61  TTSDFPSVTAFRYLVAAVGLQCLWSFSLAIVDAYALLVRRSLRNYTMVGLFTVGDAVTST 120
           TTSDFPSVTAFRYLVAA GLQCLWSFSLA+VDAYALLVRRSL+N ++VGLFT+GDA+TST
Sbjct: 61  TTSDFPSVTAFRYLVAAAGLQCLWSFSLAVVDAYALLVRRSLQNCSIVGLFTIGDAITST 120

Query: 121 LTFSAACSSAGITVLIGNDLNKCGVNHCAQFESATAMAFISWFAVSPSFLLNFWSLASR 180
           LTFSAACSSAGITVLIGNDLNKCGVNHCAQFESATAMAFISWFAVSPSFLLNFWSLASR
Sbjct: 121 LTFSAACSSAGITVLIGNDLNKCGVNHCAQFESATAMAFISWFAVSPSFLLNFWSLASR 179

[Close]

BLAST of Lcy04g010940 vs. NCBI nr
Match: XP_022978910.1 (CASP-like protein 5A2 [Cucurbita maxima] >KAG6604423.1 CASP-like protein 5A1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7034570.1 CASP-like protein 5A1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 334.3 bits (856), Expect = 6.3e-88
Identity = 168/179 (93.85%), Postives = 175/179 (97.77%), Query Frame = 0


Query: 1   MNVSRPSVHPVEAPPLTEGAVHNAPRVRMKDVQGMPGTPGGLALRLLQFVFAAVSLCVMA 60
           MNVSRPSVHPVEAPPLTEGAVHN PRVRMKDVQGMPGT GGLALRLLQF+FAAVSLCVMA
Sbjct: 1   MNVSRPSVHPVEAPPLTEGAVHNGPRVRMKDVQGMPGTTGGLALRLLQFIFAAVSLCVMA 60

Query: 61  TTSDFPSVTAFRYLVAAVGLQCLWSFSLAIVDAYALLVRRSLRNYTMVGLFTVGDAVTST 120
           TTSDFPSVTAFRYLVAA GLQCLWSFSLA+VDAYALLVRRSL+N ++VGLFT+GDA+TST
Sbjct: 61  TTSDFPSVTAFRYLVAAAGLQCLWSFSLAVVDAYALLVRRSLQNCSIVGLFTIGDAITST 120

Query: 121 LTFSAACSSAGITVLIGNDLNKCGVNHCAQFESATAMAFISWFAVSPSFLLNFWSLASR 180
           LTFSAACSSAGITVLIGNDLNKCGVNHCAQFESATAMAFISWFAVSPSFLLNFWSLASR
Sbjct: 121 LTFSAACSSAGITVLIGNDLNKCGVNHCAQFESATAMAFISWFAVSPSFLLNFWSLASR 179

[Close]

BLAST of Lcy04g010940 vs. NCBI nr
Match: XP_004143253.1 (CASP-like protein 5A2 [Cucumis sativus] >XP_008449244.1 PREDICTED: CASP-like protein 5A2 [Cucumis melo] >KAA0047255.1 CASP-like protein 5A1 [Cucumis melo var. makuwa] >KGN48158.1 hypothetical protein Csa_003346 [Cucumis sativus] >TYK05890.1 CASP-like protein 5A1 [Cucumis melo var. makuwa])

HSP 1 Score: 334.0 bits (855), Expect = 8.2e-88
Identity = 170/179 (94.97%), Postives = 175/179 (97.77%), Query Frame = 0


Query: 1   MNVSRPSVHPVEAPPLTEGAVHNAPRVRMKDVQGMPGTPGGLALRLLQFVFAAVSLCVMA 60
           MNVSRPSVHPVEAPPLTEGAVHN PRVRMKDVQGMPGT GGLALRLLQFVFA VSLCVM+
Sbjct: 1   MNVSRPSVHPVEAPPLTEGAVHNGPRVRMKDVQGMPGTLGGLALRLLQFVFATVSLCVMS 60

Query: 61  TTSDFPSVTAFRYLVAAVGLQCLWSFSLAIVDAYALLVRRSLRNYTMVGLFTVGDAVTST 120
           TTSDFPSVTAFRYLVAAVGLQCLWSFSLA+VDAYALLVRRSLRN ++VGLFT+GDAVTST
Sbjct: 61  TTSDFPSVTAFRYLVAAVGLQCLWSFSLAVVDAYALLVRRSLRNCSIVGLFTLGDAVTST 120

Query: 121 LTFSAACSSAGITVLIGNDLNKCGVNHCAQFESATAMAFISWFAVSPSFLLNFWSLASR 180
           LTFSAACSSAGITVLIGNDLNKCGVNHCAQFESATAMAFISWFAVSPSFLLNFWSLASR
Sbjct: 121 LTFSAACSSAGITVLIGNDLNKCGVNHCAQFESATAMAFISWFAVSPSFLLNFWSLASR 179

[Close]

BLAST of Lcy04g010940 vs. NCBI nr
Match: XP_038881202.1 (CASP-like protein 5A2 [Benincasa hispida])

HSP 1 Score: 334.0 bits (855), Expect = 8.2e-88
Identity = 170/179 (94.97%), Postives = 174/179 (97.21%), Query Frame = 0


Query: 1   MNVSRPSVHPVEAPPLTEGAVHNAPRVRMKDVQGMPGTPGGLALRLLQFVFAAVSLCVMA 60
           MNVSRPSVHPVEAPPLTEGAVHN PRVRMKDVQGMPGT GGLALRLLQF+FAAVSLCVMA
Sbjct: 1   MNVSRPSVHPVEAPPLTEGAVHNGPRVRMKDVQGMPGTLGGLALRLLQFIFAAVSLCVMA 60

Query: 61  TTSDFPSVTAFRYLVAAVGLQCLWSFSLAIVDAYALLVRRSLRNYTMVGLFTVGDAVTST 120
           TTSDFPSVTAFRYLVAAVGLQCLWSFSL +VDAYALLVRRSLRN ++VGLFT GDAVTST
Sbjct: 61  TTSDFPSVTAFRYLVAAVGLQCLWSFSLGVVDAYALLVRRSLRNCSIVGLFTFGDAVTST 120

Query: 121 LTFSAACSSAGITVLIGNDLNKCGVNHCAQFESATAMAFISWFAVSPSFLLNFWSLASR 180
           LTFSAACSSAGITVLIGNDLNKCGVNHCAQFESATAMAFISWFAVSPSFLLNFWSLASR
Sbjct: 121 LTFSAACSSAGITVLIGNDLNKCGVNHCAQFESATAMAFISWFAVSPSFLLNFWSLASR 179

[Close]

BLAST of Lcy04g010940 vs. NCBI nr
Match: XP_023543053.1 (CASP-like protein 5A2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 333.2 bits (853), Expect = 1.4e-87
Identity = 167/179 (93.30%), Postives = 175/179 (97.77%), Query Frame = 0


Query: 1   MNVSRPSVHPVEAPPLTEGAVHNAPRVRMKDVQGMPGTPGGLALRLLQFVFAAVSLCVMA 60
           MNVSRPSVHPVEAPPLTEGAVHN PRVRMKDVQGMPGT GGLALRLLQF+FAAVSLCVMA
Sbjct: 1   MNVSRPSVHPVEAPPLTEGAVHNGPRVRMKDVQGMPGTTGGLALRLLQFIFAAVSLCVMA 60

Query: 61  TTSDFPSVTAFRYLVAAVGLQCLWSFSLAIVDAYALLVRRSLRNYTMVGLFTVGDAVTST 120
           TTSDFPSVTAFRYLVAA GLQCLWSFSLA+VDAYALLVRRSL+N ++VGLFT+GDA+TST
Sbjct: 61  TTSDFPSVTAFRYLVAAAGLQCLWSFSLAVVDAYALLVRRSLQNCSIVGLFTIGDAITST 120

Query: 121 LTFSAACSSAGITVLIGNDLNKCGVNHCAQFESATAMAFISWFAVSPSFLLNFWSLASR 180
           LTFSAACSSAGITVLIGNDLNKCGVNHCAQFESATA+AFISWFAVSPSFLLNFWSLASR
Sbjct: 121 LTFSAACSSAGITVLIGNDLNKCGVNHCAQFESATALAFISWFAVSPSFLLNFWSLASR 179

[Close]

BLAST of Lcy04g010940 vs. NCBI nr
Match: XP_022926121.1 (CASP-like protein 5A2 [Cucurbita moschata])

HSP 1 Score: 332.8 bits (852), Expect = 1.8e-87
Identity = 167/179 (93.30%), Postives = 174/179 (97.21%), Query Frame = 0


Query: 1   MNVSRPSVHPVEAPPLTEGAVHNAPRVRMKDVQGMPGTPGGLALRLLQFVFAAVSLCVMA 60
           MNVSRPSVHPVEAPPLTEGAVHN PRVRMKDVQGMPGT GGLALRLLQF+FA VSLCVMA
Sbjct: 1   MNVSRPSVHPVEAPPLTEGAVHNGPRVRMKDVQGMPGTTGGLALRLLQFIFAVVSLCVMA 60

Query: 61  TTSDFPSVTAFRYLVAAVGLQCLWSFSLAIVDAYALLVRRSLRNYTMVGLFTVGDAVTST 120
           TTSDFPSVTAFRYLVAA GLQCLWSFSLA+VDAYALLVRRSL+N ++VGLFT+GDA+TST
Sbjct: 61  TTSDFPSVTAFRYLVAAAGLQCLWSFSLAVVDAYALLVRRSLQNCSIVGLFTIGDAITST 120

Query: 121 LTFSAACSSAGITVLIGNDLNKCGVNHCAQFESATAMAFISWFAVSPSFLLNFWSLASR 180
           LTFSAACSSAGITVLIGNDLNKCGVNHCAQFESATAMAFISWFAVSPSFLLNFWSLASR
Sbjct: 121 LTFSAACSSAGITVLIGNDLNKCGVNHCAQFESATAMAFISWFAVSPSFLLNFWSLASR 179

[Close]

BLAST of Lcy04g010940 vs. TAIR 10
Match: AT2G28370.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 251.9 bits (642), Expect = 3.8e-67
Identity = 127/179 (70.95%), Postives = 145/179 (81.01%), Query Frame = 0


Query: 1   MNVSRPSVHPVEAPPLTEGAVHNAPRVRMKDVQGMPGTPGGLALRLLQFVFAAVSLCVMA 60
           MNVS  SVHPVE PP     V N PRVRM D++GMPGT  GLALR  QF+FAA +LCVMA
Sbjct: 1   MNVSHASVHPVEDPPAAATEVENPPRVRMDDMEGMPGTLLGLALRFFQFLFAAAALCVMA 60

Query: 61  TTSDFPSVTAFRYLVAAVGLQCLWSFSLAIVDAYALLVRRSLRNYTMVGLFTVGDAVTST 120
           +TSDFPSVTAF YLVAA GLQ LWS +LA+VD YA++V+RSL+N  +V LF +GD VTST
Sbjct: 61  STSDFPSVTAFCYLVAATGLQSLWSLALAMVDVYAIMVKRSLQNRRLVSLFAIGDGVTST 120

Query: 121 LTFSAACSSAGITVLIGNDLNKCGVNHCAQFESATAMAFISWFAVSPSFLLNFWSLASR 180
           LTF+AAC+SAGITVLI NDLN C  NHC QFE++TA+AFISWFA  PSFL NFWSLASR
Sbjct: 121 LTFAAACASAGITVLIDNDLNSCAQNHCVQFETSTALAFISWFAALPSFLFNFWSLASR 179

[Close]

BLAST of Lcy04g010940 vs. TAIR 10
Match: AT2G37200.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 236.1 bits (601), Expect = 2.2e-62
Identity = 129/180 (71.67%), Postives = 149/180 (82.78%), Query Frame = 0


Query: 1   MNVSRPSVHPVEAPPL--TEGAVHNAPRVRMKDVQGMPGTPGGLALRLLQFVFAAVSLCV 60
           MNVSRP++HPV+A P+  T GA+ + P VRMKDVQGMPGT GGL LRL QFV A +S+ V
Sbjct: 2   MNVSRPAIHPVDALPVAPTAGAI-DRPPVRMKDVQGMPGTTGGLILRLSQFVPALISVSV 61

Query: 61  MATTSDFPSVTAFRYLVAAVGLQCLWSFSLAIVDAYALLVRRSLRNYTMVGLFTVGDAVT 120
           M TTSDF S TAF  LV AV LQ LWS SL I+DAYALLVRRSLRN+++V  FT+GD VT
Sbjct: 62  MVTTSDFRSATAFCCLVLAVSLQSLWSLSLFIIDAYALLVRRSLRNHSVVQCFTIGDGVT 121

Query: 121 STLTFSAACSSAGITVLIGNDLNKCGVNHCAQFESATAMAFISWFAVSPSFLLNFWSLAS 179
           STLTF+AA +SAGITVLI NDL +C VNHC +FE+ATAMAFISWFAVSPSF+LNFWSLA+
Sbjct: 122 STLTFAAASASAGITVLI-NDLGQCNVNHCTRFETATAMAFISWFAVSPSFILNFWSLAT 179

[Close]

BLAST of Lcy04g010940 vs. TAIR 10
Match: AT3G23200.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 131.7 bits (330), Expect = 5.8e-31
Identity = 74/151 (49.01%), Postives = 99/151 (65.56%), Query Frame = 0


Query: 29  MKDVQGMPGTPGGLALRLLQFVFAAVSLCVMATTSDFPSVTAFRYLVAAVGLQCLWSFSL 88
           M D+ G PGT  GL LR+ Q VFAA S+  M T+  F S TAF YL+AA+GLQ +WSF L
Sbjct: 1   MIDIPGTPGTLTGLVLRISQCVFAAGSISYMVTSGGFFSFTAFCYLIAAMGLQVIWSFGL 60

Query: 89  AIVDAYALLVRRSLRNYTMVGLFTVGDAVTSTLTFSAACSSAGITVLIGNDLNKCGVN-H 148
           AI+D +AL+ +++L +  +V LF VGD VTSTL+ + A SSAGITVL   DL  C     
Sbjct: 61  AILDTFALVRKKTLLSPVLVSLFVVGDWVTSTLSLAGASSSAGITVLYFGDLGSCSFEAE 120

Query: 149 CAQFESATAMAFISWFAVSPSFLLNFWSLAS 179
           C +++ + A+AF+ W  ++ S L   W LAS
Sbjct: 121 CWKYQLSVALAFLCWITIAVSSLTTLWLLAS 151

[Close]

BLAST of Lcy04g010940 vs. TAIR 10
Match: AT3G53850.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 125.2 bits (313), Expect = 5.4e-29
Identity = 70/153 (45.75%), Postives = 97/153 (63.40%), Query Frame = 0


Query: 29  MKDVQGMPGTPGGLALRLLQFVFAAVSLCVMATTSDFPSVTAFRYLVAAVGLQCLWSFSL 88
           MK + G PGT  GL LR+ Q   AA S+ VM +  +F   TAF YL+A++GLQ LWSF L
Sbjct: 1   MKKLLGGPGTVCGLLLRIGQCASAAASIGVMVSAKEFSVHTAFCYLIASMGLQLLWSFGL 60

Query: 89  AIVDAYALLVRRSLRNYTMVGLFTVGDAVTSTLTFSAACSSAGITVLIGNDLNKCGVNH- 148
           A +D YAL  ++ L+N  +V LF VGD VT+ L+ +AACSSAG+ VL   D+  C     
Sbjct: 61  ACLDVYALRGKKDLQNPILVSLFVVGDWVTAMLSLAAACSSAGVVVLYEKDIKYCNTQSQ 120

Query: 149 --CAQFESATAMAFISWFAVSPSFLLNFWSLAS 179
             C ++E A A++F++W  ++ S  + FW LAS
Sbjct: 121 YPCLRYEVAVALSFVTWIQIAVSSHVTFWILAS 153

[Close]

BLAST of Lcy04g010940 vs. TAIR 10
Match: AT5G02060.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 117.9 bits (294), Expect = 8.6e-27
Identity = 68/151 (45.03%), Postives = 93/151 (61.59%), Query Frame = 0


Query: 29  MKDVQGMPGTPGGLALRLLQFVFAAVSLCVMATTSDFPSVTAFRYLVAAVGLQCLWSFSL 88
           MK + G PGT  GL LRL Q   AA S+ VM ++ DF + TAF +LVA++GLQ +WSF L
Sbjct: 1   MKKMIGSPGTMSGLILRLGQCATAAASIGVMVSSYDFSNYTAFCFLVASMGLQLIWSFGL 60

Query: 89  AIVDAYALLVRRSLRNYTMVGLFTVGDAVTSTLTFSAACSSAGITVLIGNDLNKCGVN-- 148
           A +D YA+  +  LR+  ++ LFTVGD VT+ L  +AACSSAG+TVL   D   C     
Sbjct: 61  ACLDVYAIRRKSDLRSPILLSLFTVGDWVTALLALAAACSSAGVTVLFTKDTEFCRQQPA 120

Query: 149 -HCAQFESATAMAFISWFAVSPSFLLNFWSL 177
             C +F+ +  ++F +WF  + S    FW L
Sbjct: 121 LSCDRFQISVGLSFFNWFLAAISSHTMFWIL 151

The following BLAST results are available for this feature:

BLAST of Lcy04g010940 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SKN3	5.4e-66	70.95	CASP-like protein 5A2 OS=Arabidopsis thaliana OX=3702 GN=At2g28370 PE=2 SV=1	[more]
P0DI70	3.9e-64	70.39	CASP-like protein 5A1 OS=Ginkgo biloba OX=3311 GN=gba_locus_10451 PE=3 SV=1	[more]
P0DI68	4.7e-62	69.27	CASP-like protein 5A1 OS=Brachypodium distachyon OX=15368 PE=2 SV=1	[more]
Q10Q78	6.2e-62	70.95	CASP-like protein 5A1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0206600 P...	[more]
Q6NPF8	3.1e-61	71.67	CASP-like protein 5A1 OS=Arabidopsis thaliana OX=3702 GN=At2g37200 PE=2 SV=1	[more]

BLAST of Lcy04g010940 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IRK7	3.0e-88	93.85	CASP-like protein OS=Cucurbita maxima OX=3661 GN=LOC111478720 PE=3 SV=1	[more]
A0A5A7U0S9	4.0e-88	94.97	CASP-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold432G00...	[more]
A0A0A0KF35	4.0e-88	94.97	CASP-like protein OS=Cucumis sativus OX=3659 GN=Csa_6G445220 PE=3 SV=1	[more]
A0A1S3BLL2	4.0e-88	94.97	CASP-like protein OS=Cucumis melo OX=3656 GN=LOC103491180 PE=3 SV=1	[more]
A0A6J1EDZ3	8.9e-88	93.30	CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111433327 PE=3 SV=1	[more]

BLAST of Lcy04g010940 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022978910.1	6.3e-88	93.85	CASP-like protein 5A2 [Cucurbita maxima] >KAG6604423.1 CASP-like protein 5A1, pa...	[more]
XP_004143253.1	8.2e-88	94.97	CASP-like protein 5A2 [Cucumis sativus] >XP_008449244.1 PREDICTED: CASP-like pro...	[more]
XP_038881202.1	8.2e-88	94.97	CASP-like protein 5A2 [Benincasa hispida]	[more]
XP_023543053.1	1.4e-87	93.30	CASP-like protein 5A2 [Cucurbita pepo subsp. pepo]	[more]
XP_022926121.1	1.8e-87	93.30	CASP-like protein 5A2 [Cucurbita moschata]	[more]

BLAST of Lcy04g010940 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G28370.1	3.8e-67	70.95	Uncharacterised protein family (UPF0497)	[more]
AT2G37200.1	2.2e-62	71.67	Uncharacterised protein family (UPF0497)	[more]
AT3G23200.1	5.8e-31	49.01	Uncharacterised protein family (UPF0497)	[more]
AT3G53850.1	5.4e-29	45.75	Uncharacterised protein family (UPF0497)	[more]
AT5G02060.1	8.6e-27	45.03	Uncharacterised protein family (UPF0497)	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006702	Casparian strip membrane protein domain	PFAM	PF04535	DUF588	coord: 38..164 e-value: 6.5E-26 score: 90.9
IPR045009	CASP-like protein 5	PANTHER	PTHR32021	CASP-LIKE PROTEIN 5B3	coord: 17..179
None	No IPR available	PANTHER	PTHR32021:SF16	CASP-LIKE PROTEIN 5A2	coord: 17..179

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy04g010940.1	Lcy04g010940.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane