Lcy04g009890 (gene) Sponge gourd (P93075) v1

Overview
NameLcy04g009890
Typegene
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionC2H2-type domain-containing protein
LocationChr04: 41255823 .. 41256831 (+)
RNA-Seq ExpressionLcy04g009890
SyntenyLcy04g009890
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GTCAATTCAATACCTTTTCCTCTGATTTAATTTCAGTTCCTAACACCATCCCTCCCTGGAAAGATTCTACTATTCTTCTCAATGGAGTCCAAACGATGCTGGATGATGTGGGAAAAGAAGAAGAAGAAGAATTCGACAACGGGTTCCGATCATCATTTTCTTCAAACAACCACAAACATCGTCGTCAACAACAACAACAACAAAGCTTCTTCTTTTGATGATTCATGGGAAGAACAAGCTTTCGCCGAGGATGCCGCCGGTCATCTCGGTGGCTGCGTTTGGCCGCCGAGATCCTACTCTTGCAGCTTCTGCAAAAGGGAATTCAGGTCAGCTCAAGCCCTCGGCGGTCACATGAATGTTCACCGACGCGACCGTGCAAGGTTAAAGCATGAATCTTTGAAACCCCAAATCGAAACCCATCATCAAATTCCCCCAAAAAACAACCCCTTTACGTCATTGACCGATCTTCAACAACACCCATCTTCCCAATTGGTATGTGATGAAAATTTGGTCTTTAACCCTAACCCTAAATCTTCATCATCTTTTTGCCTCTCAGCCTTGCCCTCACAAAGCTTGGTGGAATCTGATCTTGCTCCAATAACCCTTCATAAATGGCATCAAAGTTCAGACCTTTCCATAAAAACAAGCGATCTCTTCAAGGAAGATGCAGTTTGTTGCAAGAGAAAGAGGACAGATCATGCTCCGTCCACGGTGGCTTTCTTTTTCCGATCAGAGGTAATTGGACTTAGCCATAGCTCCGTCGAGGATTTGGATCTCGAGCTCCGCCTTGGCGGTGGCGGCGGCCGGCCAAAGCCAAAGCTAAAATAAAATTGCACTGCCGTGACTTTATCTCTATAGTTTGTTTCTCTCTGTTGTTTCATTTTCCTTTTGGAATCTCTTCTGTTTTTCTTTTTTTTTCTCCTTCTGATCGTGTCAGTTCTTCTACTACTTCTCTCTTTCAGCAAGATTGTAGCAAAATTCAACAATATTGCTCACACAAGGTCATTAG

mRNA sequence

GTCAATTCAATACCTTTTCCTCTGATTTAATTTCAGTTCCTAACACCATCCCTCCCTGGAAAGATTCTACTATTCTTCTCAATGGAGTCCAAACGATGCTGGATGATGTGGGAAAAGAAGAAGAAGAAGAATTCGACAACGGGTTCCGATCATCATTTTCTTCAAACAACCACAAACATCGTCGTCAACAACAACAACAACAAAGCTTCTTCTTTTGATGATTCATGGGAAGAACAAGCTTTCGCCGAGGATGCCGCCGGTCATCTCGGTGGCTGCGTTTGGCCGCCGAGATCCTACTCTTGCAGCTTCTGCAAAAGGGAATTCAGGTCAGCTCAAGCCCTCGGCGGTCACATGAATGTTCACCGACGCGACCGTGCAAGGTTAAAGCATGAATCTTTGAAACCCCAAATCGAAACCCATCATCAAATTCCCCCAAAAAACAACCCCTTTACGTCATTGACCGATCTTCAACAACACCCATCTTCCCAATTGGTATGTGATGAAAATTTGGTCTTTAACCCTAACCCTAAATCTTCATCATCTTTTTGCCTCTCAGCCTTGCCCTCACAAAGCTTGGTGGAATCTGATCTTGCTCCAATAACCCTTCATAAATGGCATCAAAGTTCAGACCTTTCCATAAAAACAAGCGATCTCTTCAAGGAAGATGCAGTTTGTTGCAAGAGAAAGAGGACAGATCATGCTCCGTCCACGGTGGCTTTCTTTTTCCGATCAGAGGTAATTGGACTTAGCCATAGCTCCGTCGAGGATTTGGATCTCGAGCTCCGCCTTGGCGGTGGCGGCGGCCGGCCAAAGCCAAAGCTAAAATAAAATTGCACTGCCGTGACTTTATCTCTATAGTTTGTTTCTCTCTGTTGTTTCATTTTCCTTTTGGAATCTCTTCTGTTTTTCTTTTTTTTTCTCCTTCTGATCGTGTCAGTTCTTCTACTACTTCTCTCTTTCAGCAAGATTGTAGCAAAATTCAACAATATTGCTCACACAAGGTCATTAG

Coding sequence (CDS)

ATGGAGTCCAAACGATGCTGGATGATGTGGGAAAAGAAGAAGAAGAAGAATTCGACAACGGGTTCCGATCATCATTTTCTTCAAACAACCACAAACATCGTCGTCAACAACAACAACAACAAAGCTTCTTCTTTTGATGATTCATGGGAAGAACAAGCTTTCGCCGAGGATGCCGCCGGTCATCTCGGTGGCTGCGTTTGGCCGCCGAGATCCTACTCTTGCAGCTTCTGCAAAAGGGAATTCAGGTCAGCTCAAGCCCTCGGCGGTCACATGAATGTTCACCGACGCGACCGTGCAAGGTTAAAGCATGAATCTTTGAAACCCCAAATCGAAACCCATCATCAAATTCCCCCAAAAAACAACCCCTTTACGTCATTGACCGATCTTCAACAACACCCATCTTCCCAATTGGTATGTGATGAAAATTTGGTCTTTAACCCTAACCCTAAATCTTCATCATCTTTTTGCCTCTCAGCCTTGCCCTCACAAAGCTTGGTGGAATCTGATCTTGCTCCAATAACCCTTCATAAATGGCATCAAAGTTCAGACCTTTCCATAAAAACAAGCGATCTCTTCAAGGAAGATGCAGTTTGTTGCAAGAGAAAGAGGACAGATCATGCTCCGTCCACGGTGGCTTTCTTTTTCCGATCAGAGGTAATTGGACTTAGCCATAGCTCCGTCGAGGATTTGGATCTCGAGCTCCGCCTTGGCGGTGGCGGCGGCCGGCCAAAGCCAAAGCTAAAATAA

Protein sequence

MESKRCWMMWEKKKKKNSTTGSDHHFLQTTTNIVVNNNNNKASSFDDSWEEQAFAEDAAGHLGGCVWPPRSYSCSFCKREFRSAQALGGHMNVHRRDRARLKHESLKPQIETHHQIPPKNNPFTSLTDLQQHPSSQLVCDENLVFNPNPKSSSSFCLSALPSQSLVESDLAPITLHKWHQSSDLSIKTSDLFKEDAVCCKRKRTDHAPSTVAFFFRSEVIGLSHSSVEDLDLELRLGGGGGRPKPKLK
Homology
BLAST of Lcy04g009890 vs. ExPASy Swiss-Prot
Match: Q9LHS9 (Probable transcriptional regulator RABBIT EARS OS=Arabidopsis thaliana OX=3702 GN=RBE PE=2 SV=2)

HSP 1 Score: 111.7 bits (278), Expect = 1.2e-23
Identity = 80/200 (40.00%), Postives = 106/200 (53.00%), Query Frame = 0

Query: 50  EEQAFAE-DAAGHLGGCVWPPRSYSCSFCKREFRSAQALGGHMNVHRRDRARLKHESLKP 109
           EE+AFA  +  G  GGC+WPPRSYSCSFC REF+SAQALGGHMNVHRRDRARLK +SL P
Sbjct: 32  EERAFASAEEYGGGGGCMWPPRSYSCSFCGREFKSAQALGGHMNVHRRDRARLKQQSLSP 91

Query: 110 QIETHHQIPPKNNPFTSLTDLQQHPSSQLVCDENLVFNPNPKSSSSFCLSALPSQSLVES 169
              T    PP+ +    + D+    S  LV +E    N   +  S  C     + +++ES
Sbjct: 92  S-STDQATPPECDRQQQVLDV---GSKVLVQEETRKPNGTKREISDVC-----NNNVLES 151

Query: 170 DLAPITLHKWHQSSDLSI---------KTSDLFKEDAVCCKRKRTDHAPSTVAFFFRSEV 229
            +           +DLS+         +   L    +   KR +TD +   +       V
Sbjct: 152 SMKRYEHDNGEVKTDLSVGLLSTEFDPRKKQLINGSSSSWKRAKTDVSRFPMML---GLV 211

Query: 230 IGLS--HSSVEDLDLELRLG 238
           IG+S  +   E+LDLELRLG
Sbjct: 212 IGISEINGHHEELDLELRLG 219

BLAST of Lcy04g009890 vs. ExPASy Swiss-Prot
Match: O80942 (Zinc finger protein 10 OS=Arabidopsis thaliana OX=3702 GN=ZFP10 PE=2 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 4.0e-19
Identity = 61/129 (47.29%), Postives = 76/129 (58.91%), Query Frame = 0

Query: 41  KASSFDDSWEEQAFAEDAAGHLGGCVWPPRSYSCSFCKREFRSAQALGGHMNVHRRDRAR 100
           K S+ + SWEE AFAED A    G +WPPRSY+CSFC+REF+SAQALGGHMNVHRRDRAR
Sbjct: 11  KKSNKESSWEELAFAEDDA---AGSLWPPRSYTCSFCRREFKSAQALGGHMNVHRRDRAR 70

Query: 101 LKHESLKPQIETHHQIPPKNNPFTSLTDLQQHPSSQLVCDEN---LVFN--PNPKSSSSF 160
           LK      Q +  +  P      +S  +   H  S  + + +   LVFN  PN   +   
Sbjct: 71  LK------QADDQYLFPKS----SSSPEYPSHKDSDNIHETSCYTLVFNTKPNYFKTQHS 126

Query: 161 CLSALPSQS 165
           C+  L S S
Sbjct: 131 CVIDLSSSS 126

BLAST of Lcy04g009890 vs. ExPASy Swiss-Prot
Match: Q38895 (Transcriptional regulator SUPERMAN OS=Arabidopsis thaliana OX=3702 GN=SUP PE=1 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 1.2e-18
Identity = 76/181 (41.99%), Postives = 93/181 (51.38%), Query Frame = 0

Query: 61  HLGGCVWPPRSYSCSFCKREFRSAQALGGHMNVHRRDRARLKHESLKPQIETHHQIPPKN 120
           +L G  WPPRSY+CSFCKREFRSAQALGGHMNVHRRDRARL+ +       T    PP  
Sbjct: 36  YLLGFSWPPRSYTCSFCKREFRSAQALGGHMNVHRRDRARLRLQQSPSSSST--PSPPYP 95

Query: 121 NPFTSLTDLQQHPSSQLVCDENLVFNP--NPKSSSSFCLSALPSQSLVESDLAPITLHKW 180
           NP  S + +   P         L   P  +P SS  +    + S S  +S   P    K 
Sbjct: 96  NPNYSYSTMANSPPPH---HSPLTLFPTLSPPSSPRYRAGLIRSLS-PKSKHTPENACKT 155

Query: 181 HQSSDL--SIKTSDLFKEDAVCCKRKRTDHAPSTVAFFFRSEVIGLSHSSVEDLDLELRL 238
            +SS L  + + +    +DA  CK  R D   S          IGL + S +DLDLELRL
Sbjct: 156 KKSSLLVEAGEATRFTSKDA--CKILRNDEIISL------ELEIGLINESEQDLDLELRL 202

BLAST of Lcy04g009890 vs. ExPASy Swiss-Prot
Match: Q9SLB8 (Zinc finger protein 11 OS=Arabidopsis thaliana OX=3702 GN=ZFP11 PE=2 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 8.6e-14
Identity = 61/179 (34.08%), Postives = 91/179 (50.84%), Query Frame = 0

Query: 67  WPPRSYSCSFCKREFRSAQALGGHMNVHRRDRARLKHESLKPQIETHHQIPPKN-NPFTS 126
           WPP++Y+CSFC+REFRSAQALGGHMNVHRRDRA+L+ +      E HH  P  N NP  S
Sbjct: 44  WPPKNYTCSFCRREFRSAQALGGHMNVHRRDRAKLR-QIPSWLFEPHHHTPIANPNPNFS 103

Query: 127 LTDLQQHPSSQLVCDENLVFNPNPKSSSSFCLSALPSQ--SLVESDLAPITLHKWHQSSD 186
            +      ++ L   E  + N   K+      +  PS    L++S  +   L    + + 
Sbjct: 104 SSSSSSTTTAHL---EPSLTNQRSKT------TPFPSARFDLLDSTTSYGGLMMDREKNK 163

Query: 187 LSIKTSDLFKEDAVCCKRKRTDHAPSTVAFFFRSEVIGLS-----HSSVEDLDLELRLG 238
            ++ + ++ K     C   R + +   +      +V+GL       +  + LDLELRLG
Sbjct: 164 SNVCSREIKKSAIDACHSVRCEISRGDLMNKKDDQVMGLELGMSLRNPNQVLDLELRLG 212

BLAST of Lcy04g009890 vs. ExPASy Swiss-Prot
Match: Q9SR34 (Transcriptional regulator TAC1 OS=Arabidopsis thaliana OX=3702 GN=TAC1 PE=2 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 5.8e-10
Identity = 54/170 (31.76%), Postives = 72/170 (42.35%), Query Frame = 0

Query: 70  RSYSCSFCKREFRSAQALGGHMNVHRRDRARLKHESLKP-QIETHHQIPPKNNPFTSLTD 129
           RSY CSFC R F +AQALGGHMN+HRRDRA+L+ + ++  + +   +          L +
Sbjct: 33  RSYVCSFCIRGFSNAQALGGHMNIHRRDRAKLRQKLMEDNKDDVVAESDASEVVSLDLNE 92

Query: 130 LQQHPSSQLVCDENLVFNPNPKSSSSFCLSALPSQSLVESDLAP-ITLHKWHQSSDLSIK 189
            QQ     L CD++                       V++D++P   L  W Q S L   
Sbjct: 93  QQQQQGEALTCDDH--------------------DQYVDNDISPKQKLEFWVQESKLD-- 152

Query: 190 TSDLFKEDAVCCKRKRTDHAPSTVAFFFRSEVIGLSHSSVEDLDLELRLG 238
                            DH   T A    S      H  +E LDLELRLG
Sbjct: 153 ---------------TNDHGKVTEASIDGSS--SSHHRDIEVLDLELRLG 163

BLAST of Lcy04g009890 vs. ExPASy TrEMBL
Match: A0A1S3BJY1 (probable transcriptional regulator RABBIT EARS OS=Cucumis melo OX=3656 GN=LOC103490450 PE=4 SV=1)

HSP 1 Score: 349.0 bits (894), Expect = 1.7e-92
Identity = 193/263 (73.38%), Postives = 205/263 (77.95%), Query Frame = 0

Query: 1   MESKRCWMMWEKKKKKNS--TTGSDHHFLQTTTNIVVNNNNNKASSFDDSWEEQAFAEDA 60
           ME KRCWMMWEKKKKK +  TT SDHHFLQ TT  +     + +SSFDDSWEEQAFA+DA
Sbjct: 1   MEPKRCWMMWEKKKKKKNLITTSSDHHFLQATTTTI----KSSSSSFDDSWEEQAFADDA 60

Query: 61  AGHLGGCVWPPRSYSCSFCKREFRSAQALGGHMNVHRRDRARLKHESLKPQIETHHQIPP 120
           AG LGGCVWPPRSYSCSFCKREFRSAQALGGHMNVHRRDRARLKHES KPQIETH QIPP
Sbjct: 61  AGRLGGCVWPPRSYSCSFCKREFRSAQALGGHMNVHRRDRARLKHESFKPQIETHLQIPP 120

Query: 121 KNNPFTSLTDLQQHPSSQLVCDENLVFNPNPKSSSSFCLSALPSQSLVESDLAPI----- 180
                     LQQ      VCD+NLVFNPNPKSSSSFCLS  PSQ+LVESDL P+     
Sbjct: 121 ---------TLQQQ-----VCDDNLVFNPNPKSSSSFCLSTFPSQNLVESDLTPLTTTTA 180

Query: 181 TLHKWHQSSDLSIKTS---DLFKED---AVCCKRKRT-DHAP-STVAFFFRSEVIGLSHS 240
           TLHKWHQSSDLS KTS   DL K++     C KRKRT DH+P STVAFFFRSEVIGLSHS
Sbjct: 181 TLHKWHQSSDLSQKTSDDNDLLKDEEAAVFCNKRKRTSDHSPSSTVAFFFRSEVIGLSHS 240

Query: 241 SVEDLDLELRLGGGGGRPKPKLK 249
           SVEDLDLELRLGGG    +PKLK
Sbjct: 241 SVEDLDLELRLGGG----RPKLK 241

BLAST of Lcy04g009890 vs. ExPASy TrEMBL
Match: A0A5A7STW0 (Putative transcriptional regulator RABBIT EARS OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold500G00660 PE=4 SV=1)

HSP 1 Score: 349.0 bits (894), Expect = 1.7e-92
Identity = 193/263 (73.38%), Postives = 205/263 (77.95%), Query Frame = 0

Query: 1   MESKRCWMMWEKKKKKNS--TTGSDHHFLQTTTNIVVNNNNNKASSFDDSWEEQAFAEDA 60
           ME KRCWMMWEKKKKK +  TT SDHHFLQ TT  +     + +SSFDDSWEEQAFA+DA
Sbjct: 1   MEPKRCWMMWEKKKKKKNLITTSSDHHFLQATTTTI----KSSSSSFDDSWEEQAFADDA 60

Query: 61  AGHLGGCVWPPRSYSCSFCKREFRSAQALGGHMNVHRRDRARLKHESLKPQIETHHQIPP 120
           AG LGGCVWPPRSYSCSFCKREFRSAQALGGHMNVHRRDRARLKHES KPQIETH QIPP
Sbjct: 61  AGRLGGCVWPPRSYSCSFCKREFRSAQALGGHMNVHRRDRARLKHESFKPQIETHLQIPP 120

Query: 121 KNNPFTSLTDLQQHPSSQLVCDENLVFNPNPKSSSSFCLSALPSQSLVESDLAPI----- 180
                     LQQ      VCD+NLVFNPNPKSSSSFCLS  PSQ+LVESDL P+     
Sbjct: 121 ---------TLQQQ-----VCDDNLVFNPNPKSSSSFCLSTFPSQNLVESDLTPLTTTTA 180

Query: 181 TLHKWHQSSDLSIKTS---DLFKED---AVCCKRKRT-DHAP-STVAFFFRSEVIGLSHS 240
           TLHKWHQSSDLS KTS   DL K++     C KRKRT DH+P STVAFFFRSEVIGLSHS
Sbjct: 181 TLHKWHQSSDLSQKTSDDNDLLKDEEAAVFCNKRKRTSDHSPSSTVAFFFRSEVIGLSHS 240

Query: 241 SVEDLDLELRLGGGGGRPKPKLK 249
           SVEDLDLELRLGGG    +PKLK
Sbjct: 241 SVEDLDLELRLGGG----RPKLK 241

BLAST of Lcy04g009890 vs. ExPASy TrEMBL
Match: A0A6J1EUY7 (transcriptional regulator SUPERMAN-like OS=Cucurbita moschata OX=3662 GN=LOC111438197 PE=4 SV=1)

HSP 1 Score: 343.6 bits (880), Expect = 7.0e-91
Identity = 183/256 (71.48%), Postives = 194/256 (75.78%), Query Frame = 0

Query: 1   MESKRCWMMWEKKKKKNS------TTGSDHHFLQTTTNIVVNNNNNKASSFDDSWEEQAF 60
           ME K CWMMWE K +  +      TT SDH              NNKASSFDDSWEEQAF
Sbjct: 3   MEPKPCWMMWENKNQNENKNENRLTTASDH-------------LNNKASSFDDSWEEQAF 62

Query: 61  AEDAAGHLGGCVWPPRSYSCSFCKREFRSAQALGGHMNVHRRDRARLKHESLKPQIETHH 120
           A+DAAG LGGCVWPPR YSCSFCKREFRSAQALGGHMNVHRRDRA LKHES KPQIETH 
Sbjct: 63  ADDAAGRLGGCVWPPRFYSCSFCKREFRSAQALGGHMNVHRRDRAMLKHESFKPQIETHL 122

Query: 121 QIPPKNNPFTSLTDLQQHPSSQLVCDENLVFNPNPKSSSSFCLSALPSQSLVESDLAPIT 180
           QIPPKNNPFTSL DL QHPSSQ VCDENL FNPNPKSS +         S+ ESD     
Sbjct: 123 QIPPKNNPFTSLIDLPQHPSSQFVCDENLAFNPNPKSSQN---------SVDESD----- 182

Query: 181 LHKWHQSSDLSIKTSDLFKEDAVCCKRKRTD-HAPSTVAFFFRSEVIGLSHSSVEDLDLE 240
            HKW QS DLSIKT+DLFK+DAVCCKRKR+D H+ STVAF  RSEVIGLSH+S+EDLDLE
Sbjct: 183 -HKWRQSLDLSIKTTDLFKDDAVCCKRKRSDHHSTSTVAFVLRSEVIGLSHNSIEDLDLE 230

Query: 241 LRLG-GGGGRPKPKLK 249
           LRLG GGG R KPKLK
Sbjct: 243 LRLGDGGGSRTKPKLK 230

BLAST of Lcy04g009890 vs. ExPASy TrEMBL
Match: A0A6J1HNB1 (probable transcriptional regulator RABBIT EARS OS=Cucurbita maxima OX=3661 GN=LOC111466204 PE=4 SV=1)

HSP 1 Score: 340.1 bits (871), Expect = 7.7e-90
Identity = 181/250 (72.40%), Postives = 193/250 (77.20%), Query Frame = 0

Query: 1   MESKRCWMMWEKKKKKNSTTGSDHHFLQTTTNIVVNNNNNKASSFDDSWEEQAFAEDAAG 60
           ME K CWMMWE    KN     + + L T +    +N+NNKASSFDDSWEEQAFA+DAAG
Sbjct: 3   MEPKPCWMMWE---NKNQNKNQNQNRLTTAS----DNHNNKASSFDDSWEEQAFADDAAG 62

Query: 61  HLGGCVWPPRSYSCSFCKREFRSAQALGGHMNVHRRDRARLKHESLKPQIETHHQIPPKN 120
            LGGCVWPPR YSCSFCKREFRSAQALGGHMNVHRRDRA LKHES KPQIETH QIPPKN
Sbjct: 63  RLGGCVWPPRFYSCSFCKREFRSAQALGGHMNVHRRDRAMLKHESFKPQIETHLQIPPKN 122

Query: 121 NPFTSLTDLQQHPSSQLVCDENLVFNPNPKSSSSFCLSALPSQSLVESDLAPITLHKWHQ 180
           NPFTSL DL QHPSSQ  CDENL FNPNPKSS +         S+ ESD      HKW Q
Sbjct: 123 NPFTSLIDLPQHPSSQFDCDENLAFNPNPKSSQN---------SVEESD------HKWRQ 182

Query: 181 SSDLSIKTSDLFKEDAVCCKRKRTD-HAPSTVAFFFRSEVIGLSHSSVEDLDLELRLG-G 240
           S DLS KT+DLFK+DAVCCKRKR+D H+ STVAF  RSEVIGLSHSS EDLDLELRLG G
Sbjct: 183 SLDLSTKTTDLFKDDAVCCKRKRSDHHSTSTVAFVLRSEVIGLSHSSGEDLDLELRLGDG 230

Query: 241 GGGRPKPKLK 249
           GG R KPKLK
Sbjct: 243 GGSRTKPKLK 230

BLAST of Lcy04g009890 vs. ExPASy TrEMBL
Match: A0A0A0KZM8 (C2H2-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G296275 PE=4 SV=1)

HSP 1 Score: 339.0 bits (868), Expect = 1.7e-89
Identity = 191/264 (72.35%), Postives = 202/264 (76.52%), Query Frame = 0

Query: 1   MESKRCWMMWEKKKKKNS--TTGSDHHFLQTTTNIVVNNNNNKASSFDDSWEEQAFAEDA 60
           ME KRCWMMWEKKKKK +  TT SDHHFLQ TT I        +SSFDDSWEEQAFA+DA
Sbjct: 1   MEPKRCWMMWEKKKKKKNLITTSSDHHFLQATTTI------KSSSSFDDSWEEQAFADDA 60

Query: 61  AGHLGGCVWPPRSYSCSFCKREFRSAQALGGHMNVHRRDRARLKHESLKPQIETHHQIPP 120
           AG LGGCVWPPRSYSCSFCKREFRSAQALGGHMNVHRRDRARLKHES KPQIETH QIPP
Sbjct: 61  AGRLGGCVWPPRSYSCSFCKREFRSAQALGGHMNVHRRDRARLKHESFKPQIETHLQIPP 120

Query: 121 KNNPFTSLTDLQQHPSSQLVCDENLVFNPNPK-SSSSFCLSALPSQSLVESDLAPI---- 180
             +              Q VCD+NLVF+PNPK SSSSFCLS  PSQ+LVESDL P+    
Sbjct: 121 TLH--------------QQVCDDNLVFSPNPKSSSSSFCLSTFPSQNLVESDLTPLTTTA 180

Query: 181 -TLHKWHQSSDLSIKTSD----LFKEDAV--CCKRKRT-DHAP-STVAFFFRSEVIGLSH 240
            TLHKWHQSSDLS KTSD    L  E+A   C KRKRT DH+P STVAF FRSEVIGLSH
Sbjct: 181 ATLHKWHQSSDLSQKTSDDNDLLRDEEAAVFCNKRKRTSDHSPSSTVAFIFRSEVIGLSH 240

Query: 241 SSVEDLDLELRLGGGGGRPKPKLK 249
           SSVEDLDLELRLGGG    +PKLK
Sbjct: 241 SSVEDLDLELRLGGG----RPKLK 240

BLAST of Lcy04g009890 vs. NCBI nr
Match: XP_008448173.1 (PREDICTED: probable transcriptional regulator RABBIT EARS [Cucumis melo] >XP_008448184.1 PREDICTED: probable transcriptional regulator RABBIT EARS [Cucumis melo] >KAA0032675.1 putative transcriptional regulator RABBIT EARS [Cucumis melo var. makuwa] >TYK23558.1 putative transcriptional regulator RABBIT EARS [Cucumis melo var. makuwa])

HSP 1 Score: 349.0 bits (894), Expect = 3.4e-92
Identity = 193/263 (73.38%), Postives = 205/263 (77.95%), Query Frame = 0

Query: 1   MESKRCWMMWEKKKKKNS--TTGSDHHFLQTTTNIVVNNNNNKASSFDDSWEEQAFAEDA 60
           ME KRCWMMWEKKKKK +  TT SDHHFLQ TT  +     + +SSFDDSWEEQAFA+DA
Sbjct: 1   MEPKRCWMMWEKKKKKKNLITTSSDHHFLQATTTTI----KSSSSSFDDSWEEQAFADDA 60

Query: 61  AGHLGGCVWPPRSYSCSFCKREFRSAQALGGHMNVHRRDRARLKHESLKPQIETHHQIPP 120
           AG LGGCVWPPRSYSCSFCKREFRSAQALGGHMNVHRRDRARLKHES KPQIETH QIPP
Sbjct: 61  AGRLGGCVWPPRSYSCSFCKREFRSAQALGGHMNVHRRDRARLKHESFKPQIETHLQIPP 120

Query: 121 KNNPFTSLTDLQQHPSSQLVCDENLVFNPNPKSSSSFCLSALPSQSLVESDLAPI----- 180
                     LQQ      VCD+NLVFNPNPKSSSSFCLS  PSQ+LVESDL P+     
Sbjct: 121 ---------TLQQQ-----VCDDNLVFNPNPKSSSSFCLSTFPSQNLVESDLTPLTTTTA 180

Query: 181 TLHKWHQSSDLSIKTS---DLFKED---AVCCKRKRT-DHAP-STVAFFFRSEVIGLSHS 240
           TLHKWHQSSDLS KTS   DL K++     C KRKRT DH+P STVAFFFRSEVIGLSHS
Sbjct: 181 TLHKWHQSSDLSQKTSDDNDLLKDEEAAVFCNKRKRTSDHSPSSTVAFFFRSEVIGLSHS 240

Query: 241 SVEDLDLELRLGGGGGRPKPKLK 249
           SVEDLDLELRLGGG    +PKLK
Sbjct: 241 SVEDLDLELRLGGG----RPKLK 241

BLAST of Lcy04g009890 vs. NCBI nr
Match: XP_023518423.1 (transcriptional regulator SUPERMAN-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 345.5 bits (885), Expect = 3.8e-91
Identity = 179/250 (71.60%), Postives = 195/250 (78.00%), Query Frame = 0

Query: 1   MESKRCWMMWEKKKKKNSTTGSDHHFLQTTTNIVVNNNNNKASSFDDSWEEQAFAEDAAG 60
           ME K CWMMWE  KK  +   +++     + ++     NNKASSFDDSWEEQAFA+DA+G
Sbjct: 3   MEPKPCWMMWEDNKKNKNKNKNENRLTTASDHL-----NNKASSFDDSWEEQAFADDASG 62

Query: 61  HLGGCVWPPRSYSCSFCKREFRSAQALGGHMNVHRRDRARLKHESLKPQIETHHQIPPKN 120
            LGGCVWPPR YSCSFCKREFRSAQALGGHMNVHRRDRA LKHES KPQIETH QIPPKN
Sbjct: 63  RLGGCVWPPRFYSCSFCKREFRSAQALGGHMNVHRRDRAMLKHESFKPQIETHLQIPPKN 122

Query: 121 NPFTSLTDLQQHPSSQLVCDENLVFNPNPKSSSSFCLSALPSQSLVESDLAPITLHKWHQ 180
           NPFTSL DL QHPSSQ VCDENL FNPNPKSS +         S+ ESD      HKW Q
Sbjct: 123 NPFTSLIDLPQHPSSQFVCDENLAFNPNPKSSQN---------SVDESD------HKWRQ 182

Query: 181 SSDLSIKTSDLFKEDAVCCKRKRTD-HAPSTVAFFFRSEVIGLSHSSVEDLDLELRLG-G 240
           S DLSIKT+DLFK+DAVCCKRKR+D H+ STVAF  RSEVIGLSHSS+EDLDLELRLG G
Sbjct: 183 SLDLSIKTTDLFKDDAVCCKRKRSDHHSTSTVAFVLRSEVIGLSHSSIEDLDLELRLGDG 232

Query: 241 GGGRPKPKLK 249
           GG R KPKLK
Sbjct: 243 GGSRTKPKLK 232

BLAST of Lcy04g009890 vs. NCBI nr
Match: KAG6595337.1 (putative transcriptional regulator RABBIT EARS, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 345.5 bits (885), Expect = 3.8e-91
Identity = 179/250 (71.60%), Postives = 195/250 (78.00%), Query Frame = 0

Query: 1   MESKRCWMMWEKKKKKNSTTGSDHHFLQTTTNIVVNNNNNKASSFDDSWEEQAFAEDAAG 60
           ME K CWMMWE K +  +   +++     + ++     NNKASSFDDSWEEQAFA+DAAG
Sbjct: 3   MEPKPCWMMWESKNQNENKNKNENRLTTASDHL-----NNKASSFDDSWEEQAFADDAAG 62

Query: 61  HLGGCVWPPRSYSCSFCKREFRSAQALGGHMNVHRRDRARLKHESLKPQIETHHQIPPKN 120
            LGGCVWPPR YSCSFCKREFRSAQALGGHMNVHRRDRA LKHES KPQIETH QIPPKN
Sbjct: 63  RLGGCVWPPRFYSCSFCKREFRSAQALGGHMNVHRRDRAMLKHESFKPQIETHLQIPPKN 122

Query: 121 NPFTSLTDLQQHPSSQLVCDENLVFNPNPKSSSSFCLSALPSQSLVESDLAPITLHKWHQ 180
           NPFTSL DL QHPSSQ VCDENL FNPNPKSS +         S+ ESD      HKW Q
Sbjct: 123 NPFTSLIDLPQHPSSQFVCDENLAFNPNPKSSQN---------SVDESD------HKWRQ 182

Query: 181 SSDLSIKTSDLFKEDAVCCKRKRTD-HAPSTVAFFFRSEVIGLSHSSVEDLDLELRLG-G 240
           S DLSIKT+DLFK+DAVCCKRKR+D H+ STVAF  RSEVIGLSHSS+EDLDLELRLG G
Sbjct: 183 SLDLSIKTTDLFKDDAVCCKRKRSDHHSTSTVAFVLRSEVIGLSHSSIEDLDLELRLGDG 232

Query: 241 GGGRPKPKLK 249
           GG R KPKLK
Sbjct: 243 GGSRTKPKLK 232

BLAST of Lcy04g009890 vs. NCBI nr
Match: XP_038883849.1 (probable transcriptional regulator RABBIT EARS [Benincasa hispida])

HSP 1 Score: 344.4 bits (882), Expect = 8.4e-91
Identity = 196/259 (75.68%), Postives = 205/259 (79.15%), Query Frame = 0

Query: 1   MESKRCWMMWEKKKKKNS----TTGSDHHFLQTTTNIVVNNNNNKASSFDDSWEEQAFAE 60
           ME KRCWMM EKK KK      TT SD HFLQ TT   +N N + +SSFDDSWEEQAFA+
Sbjct: 1   MEPKRCWMMLEKKNKKKKNLMITTSSD-HFLQATTT-TININKSSSSSFDDSWEEQAFAD 60

Query: 61  DAAGHLGGCVWPPRSYSCSFCKREFRSAQALGGHMNVHRRDRARLKHESLKPQIETHHQI 120
           DAAG LGGCVWPPRSYSCSFCKREFRSAQALGGHMNVHRRDRARLKHES KPQIETHHQI
Sbjct: 61  DAAGRLGGCVWPPRSYSCSFCKREFRSAQALGGHMNVHRRDRARLKHESFKPQIETHHQI 120

Query: 121 PPKNNPFTSLTDLQQHPSSQLVCDENLVFNPNPK-SSSSFCLSALPSQSLVESDLAPI-- 180
            P         +LQQ      VCD+NLVFNPNPK SSSSFCLS  PSQ+LVESDL PI  
Sbjct: 121 LP---------NLQQQ-----VCDDNLVFNPNPKSSSSSFCLSTFPSQNLVESDLTPITT 180

Query: 181 -TLHKWHQSSDLSIKTSDLFKEDAVCC-KRKR-TDHAP-STVAFFFRSEVIGLSHSSVED 240
            TLHKWHQSS+LS KTSD   +DAV C KRKR TDH P STVAFF RSEVIGLSHSSVED
Sbjct: 181 TTLHKWHQSSELSPKTSDDKDDDAVFCNKRKRTTDHPPSSTVAFFIRSEVIGLSHSSVED 240

Query: 241 LDLELRLGGGGGRPKPKLK 249
           LDLELRL GGGGRPKPKLK
Sbjct: 241 LDLELRL-GGGGRPKPKLK 242

BLAST of Lcy04g009890 vs. NCBI nr
Match: XP_022931921.1 (transcriptional regulator SUPERMAN-like [Cucurbita moschata])

HSP 1 Score: 343.6 bits (880), Expect = 1.4e-90
Identity = 183/256 (71.48%), Postives = 194/256 (75.78%), Query Frame = 0

Query: 1   MESKRCWMMWEKKKKKNS------TTGSDHHFLQTTTNIVVNNNNNKASSFDDSWEEQAF 60
           ME K CWMMWE K +  +      TT SDH              NNKASSFDDSWEEQAF
Sbjct: 3   MEPKPCWMMWENKNQNENKNENRLTTASDH-------------LNNKASSFDDSWEEQAF 62

Query: 61  AEDAAGHLGGCVWPPRSYSCSFCKREFRSAQALGGHMNVHRRDRARLKHESLKPQIETHH 120
           A+DAAG LGGCVWPPR YSCSFCKREFRSAQALGGHMNVHRRDRA LKHES KPQIETH 
Sbjct: 63  ADDAAGRLGGCVWPPRFYSCSFCKREFRSAQALGGHMNVHRRDRAMLKHESFKPQIETHL 122

Query: 121 QIPPKNNPFTSLTDLQQHPSSQLVCDENLVFNPNPKSSSSFCLSALPSQSLVESDLAPIT 180
           QIPPKNNPFTSL DL QHPSSQ VCDENL FNPNPKSS +         S+ ESD     
Sbjct: 123 QIPPKNNPFTSLIDLPQHPSSQFVCDENLAFNPNPKSSQN---------SVDESD----- 182

Query: 181 LHKWHQSSDLSIKTSDLFKEDAVCCKRKRTD-HAPSTVAFFFRSEVIGLSHSSVEDLDLE 240
            HKW QS DLSIKT+DLFK+DAVCCKRKR+D H+ STVAF  RSEVIGLSH+S+EDLDLE
Sbjct: 183 -HKWRQSLDLSIKTTDLFKDDAVCCKRKRSDHHSTSTVAFVLRSEVIGLSHNSIEDLDLE 230

Query: 241 LRLG-GGGGRPKPKLK 249
           LRLG GGG R KPKLK
Sbjct: 243 LRLGDGGGSRTKPKLK 230

BLAST of Lcy04g009890 vs. TAIR 10
Match: AT5G06070.1 (C2H2 and C2HC zinc fingers superfamily protein )

HSP 1 Score: 111.7 bits (278), Expect = 8.6e-25
Identity = 80/200 (40.00%), Postives = 106/200 (53.00%), Query Frame = 0

Query: 50  EEQAFAE-DAAGHLGGCVWPPRSYSCSFCKREFRSAQALGGHMNVHRRDRARLKHESLKP 109
           EE+AFA  +  G  GGC+WPPRSYSCSFC REF+SAQALGGHMNVHRRDRARLK +SL P
Sbjct: 32  EERAFASAEEYGGGGGCMWPPRSYSCSFCGREFKSAQALGGHMNVHRRDRARLKQQSLSP 91

Query: 110 QIETHHQIPPKNNPFTSLTDLQQHPSSQLVCDENLVFNPNPKSSSSFCLSALPSQSLVES 169
              T    PP+ +    + D+    S  LV +E    N   +  S  C     + +++ES
Sbjct: 92  S-STDQATPPECDRQQQVLDV---GSKVLVQEETRKPNGTKREISDVC-----NNNVLES 151

Query: 170 DLAPITLHKWHQSSDLSI---------KTSDLFKEDAVCCKRKRTDHAPSTVAFFFRSEV 229
            +           +DLS+         +   L    +   KR +TD +   +       V
Sbjct: 152 SMKRYEHDNGEVKTDLSVGLLSTEFDPRKKQLINGSSSSWKRAKTDVSRFPMML---GLV 211

Query: 230 IGLS--HSSVEDLDLELRLG 238
           IG+S  +   E+LDLELRLG
Sbjct: 212 IGISEINGHHEELDLELRLG 219

BLAST of Lcy04g009890 vs. TAIR 10
Match: AT2G37740.1 (zinc-finger protein 10 )

HSP 1 Score: 96.7 bits (239), Expect = 2.8e-20
Identity = 61/129 (47.29%), Postives = 76/129 (58.91%), Query Frame = 0

Query: 41  KASSFDDSWEEQAFAEDAAGHLGGCVWPPRSYSCSFCKREFRSAQALGGHMNVHRRDRAR 100
           K S+ + SWEE AFAED A    G +WPPRSY+CSFC+REF+SAQALGGHMNVHRRDRAR
Sbjct: 11  KKSNKESSWEELAFAEDDA---AGSLWPPRSYTCSFCRREFKSAQALGGHMNVHRRDRAR 70

Query: 101 LKHESLKPQIETHHQIPPKNNPFTSLTDLQQHPSSQLVCDEN---LVFN--PNPKSSSSF 160
           LK      Q +  +  P      +S  +   H  S  + + +   LVFN  PN   +   
Sbjct: 71  LK------QADDQYLFPKS----SSSPEYPSHKDSDNIHETSCYTLVFNTKPNYFKTQHS 126

Query: 161 CLSALPSQS 165
           C+  L S S
Sbjct: 131 CVIDLSSSS 126

BLAST of Lcy04g009890 vs. TAIR 10
Match: AT3G23130.1 (C2H2 and C2HC zinc fingers superfamily protein )

HSP 1 Score: 95.1 bits (235), Expect = 8.3e-20
Identity = 76/181 (41.99%), Postives = 93/181 (51.38%), Query Frame = 0

Query: 61  HLGGCVWPPRSYSCSFCKREFRSAQALGGHMNVHRRDRARLKHESLKPQIETHHQIPPKN 120
           +L G  WPPRSY+CSFCKREFRSAQALGGHMNVHRRDRARL+ +       T    PP  
Sbjct: 36  YLLGFSWPPRSYTCSFCKREFRSAQALGGHMNVHRRDRARLRLQQSPSSSST--PSPPYP 95

Query: 121 NPFTSLTDLQQHPSSQLVCDENLVFNP--NPKSSSSFCLSALPSQSLVESDLAPITLHKW 180
           NP  S + +   P         L   P  +P SS  +    + S S  +S   P    K 
Sbjct: 96  NPNYSYSTMANSPPPH---HSPLTLFPTLSPPSSPRYRAGLIRSLS-PKSKHTPENACKT 155

Query: 181 HQSSDL--SIKTSDLFKEDAVCCKRKRTDHAPSTVAFFFRSEVIGLSHSSVEDLDLELRL 238
            +SS L  + + +    +DA  CK  R D   S          IGL + S +DLDLELRL
Sbjct: 156 KKSSLLVEAGEATRFTSKDA--CKILRNDEIISL------ELEIGLINESEQDLDLELRL 202

BLAST of Lcy04g009890 vs. TAIR 10
Match: AT4G17810.1 (C2H2 and C2HC zinc fingers superfamily protein )

HSP 1 Score: 95.1 bits (235), Expect = 8.3e-20
Identity = 39/54 (72.22%), Postives = 47/54 (87.04%), Query Frame = 0

Query: 46  DDSWEEQAFAEDAAGHLGGCVWPPRSYSCSFCKREFRSAQALGGHMNVHRRDRA 100
           D+SWE +AF +D  G++ G  WPPRSY+C+FC+REFRSAQALGGHMNVHRRDRA
Sbjct: 20  DESWEVKAFEQDTKGNISGTTWPPRSYTCNFCRREFRSAQALGGHMNVHRRDRA 73

BLAST of Lcy04g009890 vs. TAIR 10
Match: AT2G42410.1 (zinc finger protein 11 )

HSP 1 Score: 79.0 bits (193), Expect = 6.1e-15
Identity = 61/179 (34.08%), Postives = 91/179 (50.84%), Query Frame = 0

Query: 67  WPPRSYSCSFCKREFRSAQALGGHMNVHRRDRARLKHESLKPQIETHHQIPPKN-NPFTS 126
           WPP++Y+CSFC+REFRSAQALGGHMNVHRRDRA+L+ +      E HH  P  N NP  S
Sbjct: 44  WPPKNYTCSFCRREFRSAQALGGHMNVHRRDRAKLR-QIPSWLFEPHHHTPIANPNPNFS 103

Query: 127 LTDLQQHPSSQLVCDENLVFNPNPKSSSSFCLSALPSQ--SLVESDLAPITLHKWHQSSD 186
            +      ++ L   E  + N   K+      +  PS    L++S  +   L    + + 
Sbjct: 104 SSSSSSTTTAHL---EPSLTNQRSKT------TPFPSARFDLLDSTTSYGGLMMDREKNK 163

Query: 187 LSIKTSDLFKEDAVCCKRKRTDHAPSTVAFFFRSEVIGLS-----HSSVEDLDLELRLG 238
            ++ + ++ K     C   R + +   +      +V+GL       +  + LDLELRLG
Sbjct: 164 SNVCSREIKKSAIDACHSVRCEISRGDLMNKKDDQVMGLELGMSLRNPNQVLDLELRLG 212

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q9LHS91.2e-2340.00Probable transcriptional regulator RABBIT EARS OS=Arabidopsis thaliana OX=3702 G... [more]
O809424.0e-1947.29Zinc finger protein 10 OS=Arabidopsis thaliana OX=3702 GN=ZFP10 PE=2 SV=1[more]
Q388951.2e-1841.99Transcriptional regulator SUPERMAN OS=Arabidopsis thaliana OX=3702 GN=SUP PE=1 S... [more]
Q9SLB88.6e-1434.08Zinc finger protein 11 OS=Arabidopsis thaliana OX=3702 GN=ZFP11 PE=2 SV=1[more]
Q9SR345.8e-1031.76Transcriptional regulator TAC1 OS=Arabidopsis thaliana OX=3702 GN=TAC1 PE=2 SV=1[more]
Match NameE-valueIdentityDescription
A0A1S3BJY11.7e-9273.38probable transcriptional regulator RABBIT EARS OS=Cucumis melo OX=3656 GN=LOC103... [more]
A0A5A7STW01.7e-9273.38Putative transcriptional regulator RABBIT EARS OS=Cucumis melo var. makuwa OX=11... [more]
A0A6J1EUY77.0e-9171.48transcriptional regulator SUPERMAN-like OS=Cucurbita moschata OX=3662 GN=LOC1114... [more]
A0A6J1HNB17.7e-9072.40probable transcriptional regulator RABBIT EARS OS=Cucurbita maxima OX=3661 GN=LO... [more]
A0A0A0KZM81.7e-8972.35C2H2-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G296275 P... [more]
Match NameE-valueIdentityDescription
XP_008448173.13.4e-9273.38PREDICTED: probable transcriptional regulator RABBIT EARS [Cucumis melo] >XP_008... [more]
XP_023518423.13.8e-9171.60transcriptional regulator SUPERMAN-like [Cucurbita pepo subsp. pepo][more]
KAG6595337.13.8e-9171.60putative transcriptional regulator RABBIT EARS, partial [Cucurbita argyrosperma ... [more]
XP_038883849.18.4e-9175.68probable transcriptional regulator RABBIT EARS [Benincasa hispida][more]
XP_022931921.11.4e-9071.48transcriptional regulator SUPERMAN-like [Cucurbita moschata][more]
Match NameE-valueIdentityDescription
AT5G06070.18.6e-2540.00C2H2 and C2HC zinc fingers superfamily protein [more]
AT2G37740.12.8e-2047.29zinc-finger protein 10 [more]
AT3G23130.18.3e-2041.99C2H2 and C2HC zinc fingers superfamily protein [more]
AT4G17810.18.3e-2072.22C2H2 and C2HC zinc fingers superfamily protein [more]
AT2G42410.16.1e-1534.08zinc finger protein 11 [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 72..94
e-value: 0.006
score: 25.8
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 74..94
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 72..99
score: 11.239817
NoneNo IPR availablePFAMPF13912zf-C2H2_6coord: 72..96
e-value: 1.1E-6
score: 28.5
NoneNo IPR availableGENE3D3.30.160.60Classic Zinc Fingercoord: 68..122
e-value: 5.8E-6
score: 28.0
NoneNo IPR availablePANTHERPTHR45801OS07G0101800 PROTEINcoord: 28..237
NoneNo IPR availablePANTHERPTHR45801:SF68CHAIN A, NMR STRUCTURE OF THE SINGLE QALGGH ZINC FINGER DOMAIN FROM ARABIDOPSIS THALIANA SUPERMAN PROTEINcoord: 28..237
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 69..99

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lcy04g009890.1Lcy04g009890.1mRNA