Lcy04g006420 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy04g006420
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Thioredoxin-like protein
Location	Chr04: 36168014 .. 36172172 (-)
RNA-Seq Expression	Lcy04g006420
Synteny	Lcy04g006420

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCTGAACCTCCGAGTGCCAACACTTGGCTTCAATGAAGCGAAGTCAAAAGTCAAATGGAAAGATTTTTGTGAGTTCTTATCCCATCTGCATATTGCCAAAATTCAGGTTTGTTTTGATATGAATTTCCAAATGGCATTCACGCAGAGTTGTAAATCTCCAATGGCTCGCTTCGCTTCCGATTCCATCACTCTCCACAGAATCCCACTCTGCTTTCGGATCCCTCAGCCTCTCCTTAAACCCTCCACCGCCCGATTTCGAAGTTGTCGCCGGAGATTTTCAGCCGTAGCCTGCCAGACAGTTCCTAATCCCGCCGACACCTCCTCCGCCGCGGTATGCTACAATTTCTTCCTCGATTGCGTTCTATTCGTGTTAGTAGGTCTTTTTGACAAGATATCAGTAGCCTTAAATAATTGAATTAACAAAATTAGGTTTAATTACCTGAAATCGAAGCCGATTGTTATTCCATGATTTATAGAGAATCATCCATTTTTCTTGATTCGTTATTTCGATATGTTTGTGAGAATTGAAAAGAATGGAGTACTATTTCGGTATAATGTCGTTTCTTCAAGATTAAATATCAGTGAACTTTCTCGAATTTCGTCGAATATTATGAAAAATAGTTCATCACTATCAACTAGATGATAAAATTTTTCAGGACGGATATCGTTGTTTTCTGGTTGTTGTTCATATTCTGACGGCTTCTTCTCCAGGAAAAATCGTCTGATGGTCCCGAATCAGTCAATGACAGCACTGGCCAAGCCGCTAGTTCTTCCAGTAATCAGGGTTTTCCAGAATTTCCCAATAAAGATATCAATAGACGAGTTGCAATCATCTCCACCATTTCAGCGGTGGCACTTTTCTTGTCAAGTCGATTAGATTTTGGAGTTTCTTTGAAGGACTTAGCTGCAGCAGCTTTGCCTTATGAAGAGGTTTCGGAATCCATAAGTGTTCCATAGTTTTAGCAATCTCTTTGCTTTACCTGATTGTGATCTCAAATTAAAGTAATTATAGGTCAGGAAAAGAAGATTTATAGTGTGTTGTTATCTGATATTTGTTCACTGCTCATTCTTTGGTAACTTATGATTCAGGCTCTGTCAAATGGAAAGCCCACTGTCGTGGAGTTCTACGCAGATTGGTGTGAAGTCTGTAGGGAATTGGCTCCAGATGTGTACAAAGTTGAGCAACAGTTCAAGTAATGATCTTGTTCTTCACTAGTTTGTGTTTGATAATGTGGAAATGTTATTCCACGTTTACACGAGTTGTTTTTGATAGATTATTAGACTTTTTTGGAAATCTATAGTCCATGTCCATCAGAATTGGTTTTCCTCAATTGTTGATGATTTCAAATTTGAGGAAGCTAAATACAACTTTGATCTTCTAGGGACCGTGTAAATTTCGTTATGCTCAATGTTGATAATACAAAGTGGGAGCAGGAGCTTGATGAGTTTGGAGTTGAGGGTATTCCACACTTTGCCTTTTTGGACAAACAAGGGAATGAAGAGGGCAATGTAGTTGGCCGACTTCCAAGACAATATCTACTTGAGAATGTGGATGCTCTTGCTCGGGGGGAAGTGTCGATACCCCATGCTCGTGTCGTAGGACAGTTTTCGAGTGCTGAAGCAAGGAAAGTGCACCAAGTTGCTGATCCAAGAAGTCATGGGTAGATTCTCTTTTCTCAAAAGCATTAGGTCAAGTTGTCTATTCACATACTCTCTTGTAGATATTCCAGATATAGCTAGTTCATCTTATACCATATTTCCAATTGTCTTATTATGAACATTTTTATTTCTCCTCTTGATAGTAAATAAGTCTTTATTTCTACTCTTGATAGTAAATTAGTCTTTCTTTCTTCCCCATATACTTTTATGCCAACTACGGGTGGATTTGATGATCAAATAAGTACCAGGGGGTTTGAATCCTTCTTATTTGTGGCTTGCGATTTGCGATCTATCTGTACTCCATTATGATAAACTCATTACTTTTTACTTTTGTACACGTTTGAAAAATGAAGTAAGTTATACAAGAATTGTAAGAACAGATCAGCCTCAGCCAATCCCACTGCTTGGTGAAGGAAATGTTCTATGCTTGGCATGTGGCATTTCCTGAAGGTGAGCAAAGAATGCTTCACATTTCTGGAAAATGACATCTACAATTCTATCCATAAGTAGGGAGGTTAAGAAAAATCACACAATTTAAAGGTTTTCCATTGGATACACAAATAATGGTGAAGTATAAAAGGTTAAATGTCCTACAAAAGAGTTCCTCTTCTTCTTGTTCTTTTACTTTTCTTTTCTTTTCACCGTGCTACGTTACCTAATAAACTATTTGTTGAAGGTGAGCTTTGTTCACTTAACCAAGGATCCTGTATGGATACTGGGGAACTATCCATAACTTCCTCTACAGGAGGCAGATAGACCTTATGATGATTGTTCTCTGGTGGAATTACCAATCTCTGGCTCCCCAATCCTGCAAGCAGCGCGGCTTTCTTAATTGTGATGCCACTTATGGATCTTTCACTCACGCTACGAGGGGATGAGCAAGTCGATCCTGCTGATGATGCTGCACAAAAATGCTCCTCCATTACACCCACTGCGTCTGATGCACAACTTCTGTCATTGAAGGCCTCATGTCGCTATGAAAAGCAAGGCATCTGAATGCAAGCTCAGCCACCTTGTGAATAGAGTAGAGGGTCCAAGCATCTCTTTGTGGCTCGAGGAAAGGATCAATTAGTTCGTCCACAGAACCTCTCCCAATCCTATCGATGGCAAGTGCAGCTAAGTTTACTTCACTCTGGGGACGAGTGAAACCAACCACTTTCAATGCTGTTATTATCTCTACCAGGACTACTCCAAAACTATAAACGCCACTTTTATCTGAAAGATAGAAATTTTGATGGTATTGTGGATCAACATAGCCCGGGGTGCCTTGTGGAGCTGTTGAGATGTGTGATATTTCTGTCATACCAAGTCTAGAAAGACCAAATTCTGCAACTTTTGATTTGAAGCCATGATCCAGAAGTATATTGCTTGACTTGATGTCTCTGTGATATATTGGTGGATGCACAGAAGAATGAAGGTATGCTATTGCACGAGAAGTTTCAGCTGCAATGGTAAGCCTTGTCGTCCATGGAAGGCCATTTCCACGCTCTCTCTGAAGATGTTGAGAGAGAGTTCCATTGGGCATAAACTCATAGACAAGGATCTGTTGGCCTTCTTCAATGCAGCAGCCAAGCAAGCGGACTAGATTCGGGTGGCTCACCGAGGAGAGTAGTTTTATCTCATTCATGACCTGGTCAATGCCATTGTGGTCTCTATATTTGATCCTTTTTACAGTAACCCACTCATCCTCATGAATCCTTCCTGCATAGACTGTACCAAAGGCTCCAGTTCCCAGCCTTTGTTTCTCGGAGAAGCCATTAGTTGCTCTTTTCTATTTCTTTGTAGGGATATAAAGTAACACTGGAATTTCCAGCAGCCTCACTTAGAAGCCGCTTTGCACTCATCTGACCTTTCAGACACATTGAGCCGCGTCGGATGCAGTAACAGAGAAGGGTCAGGACAGCCATTAGAAAAGCTCCAACAAGTACACCTGAGATTTTAACTGTGTTAGAACCATAGAACTGGATCAAACATGCTGTGGTGGTGAAAGTAATGGGTAGAACGGGATCAAGAGGGCAGGTGACTTAAGTGAGAGTCAAGTTTCTTGATGATCAGAATCGTTACATCATGAGGAATGTCGAGGGACCAGTCAGGGAAGGCGATATTCTTACCCTACTCGAGTCTGAGAGGGAAGCTAGAAGGTTGCGTTGATGGAGAATTGCTGTTGCTGCCATCATTTTTCCCATTTTAAGTGTGGATTTTAGTGACTTGTTTGCTCAGGACCTTAGGTTCTTGGGTTGAATGTGTGCACTGGATGAGGTAATTTAATTGAGTTTTGATGATACCAAGTTTTCATGCACAATTTTGTGGATTTTTACATACAAATGCATAGGTTTTTGTTTTTAATATTTTATTTTTGAATTCAACAATATGAGGTTGTGAGATTTGAACTTAGGCCTCTTGGTCATAAGCACATACTTATATGCCACTTGAGCTACTCTTGTTATTTAGGTTTATAAATGTATAGGTTCATTGACTTAAACATTTTCTAATCTAATAA

mRNA sequence

TCTGAACCTCCGAGTGCCAACACTTGGCTTCAATGAAGCGAAGTCAAAAGTCAAATGGAAAGATTTTTGTGAGTTCTTATCCCATCTGCATATTGCCAAAATTCAGGTTTGTTTTGATATGAATTTCCAAATGGCATTCACGCAGAGTTGTAAATCTCCAATGGCTCGCTTCGCTTCCGATTCCATCACTCTCCACAGAATCCCACTCTGCTTTCGGATCCCTCAGCCTCTCCTTAAACCCTCCACCGCCCGATTTCGAAGTTGTCGCCGGAGATTTTCAGCCGTAGCCTGCCAGACAGTTCCTAATCCCGCCGACACCTCCTCCGCCGCGGAAAAATCGTCTGATGGTCCCGAATCAGTCAATGACAGCACTGGCCAAGCCGCTAGTTCTTCCAGTAATCAGGGTTTTCCAGAATTTCCCAATAAAGATATCAATAGACGAGTTGCAATCATCTCCACCATTTCAGCGGTGGCACTTTTCTTGTCAAGTCGATTAGATTTTGGAGTTTCTTTGAAGGACTTAGCTGCAGCAGCTTTGCCTTATGAAGAGGCTCTGTCAAATGGAAAGCCCACTGTCGTGGAGTTCTACGCAGATTGGTGTGAAGTCTGTAGGGAATTGGCTCCAGATGTGTACAAAGTTGAGCAACAGTTCAAGGACCGTGTAAATTTCGTTATGCTCAATGTTGATAATACAAAGTGGGAGCAGGAGCTTGATGAGTTTGGAGTTGAGGGTATTCCACACTTTGCCTTTTTGGACAAACAAGGGAATGAAGAGGGCAATGTAGTTGGCCGACTTCCAAGACAATATCTACTTGAGAATGTGGATGCTCTTGCTCGGGGGGAAGTGTCGATACCCCATGCTCGTGTCGTAGGACAGTTTTCGAGTGCTGAAGCAAGGAAAGTGCACCAAGTTGCTGATCCAAGAAGTCATGGGAGGCAGATAGACCTTATGATGATTGTTCTCTGGTGGAATTACCAATCTCTGGCTCCCCAATCCTGCAAGCAGCGCGGCTTTCTTAATTGTGATGCCACTTATGGATCTTTCACTCACGCTACGAGGGGATGAGCAAGTCGATCCTGCTGATGATGCTGCACAAAAATGCTCCTCCATTACACCCACTGCGTCTGATGCACAACTTCTGTCATTGAAGGCCTCATGTCGCTATGAAAAGCAAGGCATCTGAATGCAAGCTCAGCCACCTTGTGAATAGAGTAGAGGGTCCAAGCATCTCTTTGTGGCTCGAGGAAAGGATCAATTAGTTCGTCCACAGAACCTCTCCCAATCCTATCGATGGCAAGTGCAGCTAAGTTTACTTCACTCTGGGGACGAGTGAAACCAACCACTTTCAATGCTGTTATTATCTCTACCAGGACTACTCCAAAACTATAAACGCCACTTTTATCTGAAAGATAGAAATTTTGATGGTATTGTGGATCAACATAGCCCGGGGTGCCTTGTGGAGCTGTTGAGATGTGTGATATTTCTGTCATACCAAGTCTAGAAAGACCAAATTCTGCAACTTTTGATTTGAAGCCATGATCCAGAAGTATATTGCTTGACTTGATGTCTCTGTGATATATTGGTGGATGCACAGAAGAATGAAGGTATGCTATTGCACGAGAAGTTTCAGCTGCAATGGTAAGCCTTGTCGTCCATGGAAGGCCATTTCCACGCTCTCTCTGAAGATGTTGAGAGAGAGTTCCATTGGGCATAAACTCATAGACAAGGATCTGTTGGCCTTCTTCAATGCAGCAGCCAAGCAAGCGGACTAGATTCGGGTGGCTCACCGAGGAGAGTAGTTTTATCTCATTCATGACCTGGTCAATGCCATTGTGGTCTCTATATTTGATCCTTTTTACAGTAACCCACTCATCCTCATGAATCCTTCCTGCATAGACTGTACCAAAGGCTCCAGTTCCCAGCCTTTGTTTCTCGGAGAAGCCATTAGTTGCTCTTTTCTATTTCTTTGTAGGGATATAAAGTAACACTGGAATTTCCAGCAGCCTCACTTAGAAGCCGCTTTGCACTCATCTGACCTTTCAGACACATTGAGCCGCGTCGGATGCAGTAACAGAGAAGGGTCAGGACAGCCATTAGAAAAGCTCCAACAAGTACACCTGAGATTTTAACTGTGTTAGAACCATAGAACTGGATCAAACATGCTGTGGTGGTGAAAGTAATGGGTAGAACGGGATCAAGAGGGCAGGTGACTTAAGTGAGAGTCAAGTTTCTTGATGATCAGAATCGTTACATCATGAGGAATGTCGAGGGACCAGTCAGGGAAGGCGATATTCTTACCCTACTCGAGTCTGAGAGGGAAGCTAGAAGGTTGCGTTGATGGAGAATTGCTGTTGCTGCCATCATTTTTCCCATTTTAAGTGTGGATTTTAGTGACTTGTTTGCTCAGGACCTTAGGTTCTTGGGTTGAATGTGTGCACTGGATGAGGTAATTTAATTGAGTTTTGATGATACCAAGTTTTCATGCACAATTTTGTGGATTTTTACATACAAATGCATAGGTTTTTGTTTTTAATATTTTATTTTTGAATTCAACAATATGAGGTTGTGAGATTTGAACTTAGGCCTCTTGGTCATAAGCACATACTTATATGCCACTTGAGCTACTCTTGTTATTTAGGTTTATAAATGTATAGGTTCATTGACTTAAACATTTTCTAATCTAATAA

Coding sequence (CDS)

ATGAATTTCCAAATGGCATTCACGCAGAGTTGTAAATCTCCAATGGCTCGCTTCGCTTCCGATTCCATCACTCTCCACAGAATCCCACTCTGCTTTCGGATCCCTCAGCCTCTCCTTAAACCCTCCACCGCCCGATTTCGAAGTTGTCGCCGGAGATTTTCAGCCGTAGCCTGCCAGACAGTTCCTAATCCCGCCGACACCTCCTCCGCCGCGGAAAAATCGTCTGATGGTCCCGAATCAGTCAATGACAGCACTGGCCAAGCCGCTAGTTCTTCCAGTAATCAGGGTTTTCCAGAATTTCCCAATAAAGATATCAATAGACGAGTTGCAATCATCTCCACCATTTCAGCGGTGGCACTTTTCTTGTCAAGTCGATTAGATTTTGGAGTTTCTTTGAAGGACTTAGCTGCAGCAGCTTTGCCTTATGAAGAGGCTCTGTCAAATGGAAAGCCCACTGTCGTGGAGTTCTACGCAGATTGGTGTGAAGTCTGTAGGGAATTGGCTCCAGATGTGTACAAAGTTGAGCAACAGTTCAAGGACCGTGTAAATTTCGTTATGCTCAATGTTGATAATACAAAGTGGGAGCAGGAGCTTGATGAGTTTGGAGTTGAGGGTATTCCACACTTTGCCTTTTTGGACAAACAAGGGAATGAAGAGGGCAATGTAGTTGGCCGACTTCCAAGACAATATCTACTTGAGAATGTGGATGCTCTTGCTCGGGGGGAAGTGTCGATACCCCATGCTCGTGTCGTAGGACAGTTTTCGAGTGCTGAAGCAAGGAAAGTGCACCAAGTTGCTGATCCAAGAAGTCATGGGAGGCAGATAGACCTTATGATGATTGTTCTCTGGTGGAATTACCAATCTCTGGCTCCCCAATCCTGCAAGCAGCGCGGCTTTCTTAATTGTGATGCCACTTATGGATCTTTCACTCACGCTACGAGGGGATGA

Protein sequence

MNFQMAFTQSCKSPMARFASDSITLHRIPLCFRIPQPLLKPSTARFRSCRRRFSAVACQTVPNPADTSSAAEKSSDGPESVNDSTGQAASSSSNQGFPEFPNKDINRRVAIISTISAVALFLSSRLDFGVSLKDLAAAALPYEEALSNGKPTVVEFYADWCEVCRELAPDVYKVEQQFKDRVNFVMLNVDNTKWEQELDEFGVEGIPHFAFLDKQGNEEGNVVGRLPRQYLLENVDALARGEVSIPHARVVGQFSSAEARKVHQVADPRSHGRQIDLMMIVLWWNYQSLAPQSCKQRGFLNCDATYGSFTHATRG

Homology

[Close]

BLAST of Lcy04g006420 vs. ExPASy Swiss-Prot
Match: Q7Y0D4 (Thioredoxin-like protein HCF164, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0767500 PE=2 SV=1)

HSP 1 Score: 327.4 bits (838), Expect = 1.8e-88
Identity = 169/232 (72.84%), Postives = 192/232 (82.76%), Query Frame = 0


Query: 45  RFRSCRRRFSAVACQTVPNPADTSSAAEKSSDGPESVNDST---GQAASSSSNQGFPEFP 104
           R R  RRR  +++C   P+      +AE  +D P + +DST    +A+S+S + G P FP
Sbjct: 37  RPRRARRRLGSLSCIAPPD------SAEPQTDEPAAKDDSTEDKAEASSASQDAGNPTFP 96

Query: 105 NKDINRRVAIISTISAVALFLSSRLDF-GVSLKDLAAAALPYEEALSNGKPTVVEFYADW 164
           NKD++RR+A+ STI AV LF   RLDF GVSLKDLAA A PYEEALSNGKPTVVEFYADW
Sbjct: 97  NKDLSRRIALASTIGAVGLFAYQRLDFGGVSLKDLAANATPYEEALSNGKPTVVEFYADW 156

Query: 165 CEVCRELAPDVYKVEQQFKDRVNFVMLNVDNTKWEQELDEFGVEGIPHFAFLDKQGNEEG 224
           CEVCRELAPDVYKVEQQ+KDRVNFVMLNVDNTKWEQELDEFGVEGIPHFAFLDK+GNEEG
Sbjct: 157 CEVCRELAPDVYKVEQQYKDRVNFVMLNVDNTKWEQELDEFGVEGIPHFAFLDKEGNEEG 216

Query: 225 NVVGRLPRQYLLENVDALARGEVSIPHARVVGQFSSAEARKVHQVADPRSHG 273
           NVVGRLP+QY L+NV ALA GE ++PHARVVGQFSSAE+RKVHQVADPRSHG
Sbjct: 217 NVVGRLPKQYFLDNVVALASGEPTVPHARVVGQFSSAESRKVHQVADPRSHG 262

[Close]

BLAST of Lcy04g006420 vs. ExPASy Swiss-Prot
Match: O23166 (Thioredoxin-like protein HCF164, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=HCF164 PE=1 SV=2)

HSP 1 Score: 326.6 bits (836), Expect = 3.0e-88
Identity = 165/229 (72.05%), Postives = 193/229 (84.28%), Query Frame = 0


Query: 52  RFSAVACQTVPNPADTSSAAEK--------SSDGPESVNDSTGQAASSSSNQGFPEFPNK 111
           RF AV C+  PNP  + +  EK        SS   E  + S+   +SSSS+ GFPE PNK
Sbjct: 35  RFRAVRCK--PNPESSETKQEKLVIDNGETSSASKEVESSSSVADSSSSSSSGFPESPNK 94

Query: 112 DINRRVAIISTISAVALFLSSRLDFGVSLKDLAAAALPYEEALSNGKPTVVEFYADWCEV 171
           DINRRVA ++ I+A++LF+S+RLDFG+SLKDL A+ALPYEEALSNGKPTVVEFYADWCEV
Sbjct: 95  DINRRVAAVTVIAALSLFVSTRLDFGISLKDLTASALPYEEALSNGKPTVVEFYADWCEV 154

Query: 172 CRELAPDVYKVEQQFKDRVNFVMLNVDNTKWEQELDEFGVEGIPHFAFLDKQGNEEGNVV 231
           CRELAPDVYK+EQQ+KD+VNFVMLNVDNTKWEQELDEFGVEGIPHFAFLD++GNEEGNVV
Sbjct: 155 CRELAPDVYKIEQQYKDKVNFVMLNVDNTKWEQELDEFGVEGIPHFAFLDREGNEEGNVV 214

Query: 232 GRLPRQYLLENVDALARGEVSIPHARVVGQFSSAEARKVHQVADPRSHG 273
           GRLPRQYL+ENV+ALA G+ SIP+AR VGQ+SS+E+RKVHQV DP SHG
Sbjct: 215 GRLPRQYLVENVNALAAGKQSIPYARAVGQYSSSESRKVHQVTDPLSHG 261

[Close]

BLAST of Lcy04g006420 vs. ExPASy Swiss-Prot
Match: P73920 (Thiol:disulfide interchange protein TxlA homolog OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=txlA PE=3 SV=1)

HSP 1 Score: 136.7 bits (343), Expect = 4.4e-31
Identity = 72/174 (41.38%), Postives = 103/174 (59.20%), Query Frame = 0


Query: 101 PNKDINRRVAIISTISAVALFLSSRLDF-GVSLKDLAAAALPYEEALSNGKPTVVEFYAD 160
           P K  N  +A+++   + A++L  +    G+SL+  A  A+P   AL NG+PT+VEFYAD
Sbjct: 3   PAKIRNALLAVVAIALSAAVYLGFQTQTQGISLEAQAQRAIPLATALDNGRPTLVEFYAD 62

Query: 161 WCEVCRELAPDVYKVEQQFKDRVNFVMLNVDNTKWEQELDEFGVEGIPHFAFLDKQGNEE 220
           WC  C+ +APD+ ++++ +   VNF MLNVDN KW  E+  + V+GIPHF +LD  G   
Sbjct: 63  WCTSCQAMAPDLAELKKNYGGSVNFAMLNVDNNKWLPEVLRYRVDGIPHFVYLDDTGTAI 122

Query: 221 GNVVGRLPRQYLLENVDALARGEVSIPHARVVGQFSSAEARKVH-QVADPRSHG 273
              +G  P + L +N+ AL   E  IP+A V GQ S  E R +      PRSHG
Sbjct: 123 AESIGEQPLRVLEQNITALVAHE-PIPYANVTGQTSVVENRTIEADPTSPRSHG 175

[Close]

BLAST of Lcy04g006420 vs. ExPASy Swiss-Prot
Match: P35088 (Thiol:disulfide interchange protein TxlA OS=Synechococcus elongatus (strain PCC 7942 / FACHB-805) OX=1140 GN=txlA PE=3 SV=1)

HSP 1 Score: 127.5 bits (319), Expect = 2.7e-28
Identity = 67/179 (37.43%), Postives = 102/179 (56.98%), Query Frame = 0


Query: 101 PNKDINRRVAIISTISAVALFLSSRL-DFGVSLKDLAAAALPYEEALSNGKPTVVEFYAD 160
           P++  N  V   + +  + + L SR      SL  LA  A PYE A++N +P ++EFYAD
Sbjct: 8   PSRLRNILVIAAALVLTILVVLGSRQPSAAASLASLAEQATPYEVAIANDRPMLLEFYAD 67

Query: 161 WCEVCRELAPDVYKVEQQFKDRVNFVMLNVDNTKWEQELDEFGVEGIPHFAFLDKQGNEE 220
           WC  C+ +A  +  ++Q + DR++FVMLN+DN KW  E+ ++ V+GIP F +L+ QG  +
Sbjct: 68  WCTSCQAMAGRIAALKQDYSDRLDFVMLNIDNDKWLPEVLDYNVDGIPQFVYLNGQGQPQ 127

Query: 221 GNVVGRLPRQYLLENVDALARGEVSIPHARVVG---QFSSAEARKVHQVADPRSHGRQI 276
           G  +G LPR  L  N+DAL   +  +P+    G   +FS+          DPRSH  Q+
Sbjct: 128 GISIGELPRSVLAANLDALVEAQ-PLPYTNARGNLSEFSADLQPSRSSQTDPRSHSGQV 185

[Close]

BLAST of Lcy04g006420 vs. ExPASy Swiss-Prot
Match: P12243 (Thioredoxin 1 OS=Synechococcus elongatus (strain PCC 7942 / FACHB-805) OX=1140 GN=trxA PE=3 SV=2)

HSP 1 Score: 62.4 bits (150), Expect = 1.1e-08
Identity = 31/94 (32.98%), Postives = 49/94 (52.13%), Query Frame = 0


Query: 143 EEALSNGKPTVVEFYADWCEVCRELAPDVYKVEQQFKDRVNFVMLNVDNTKWEQELDEFG 202
           +E L +  P +V+F+A WC  CR +AP V ++ QQ+ D+V  V +N D         ++G
Sbjct: 14  QEVLESSIPVLVDFWAPWCGPCRMVAPVVDEIAQQYSDQVKVVKVNTDEN--PSVASQYG 73

Query: 203 VEGIPHFAFLDKQGNEEGNVVGRLPRQYLLENVD 237
           +  IP    + K G     VVG +P+  L   +D
Sbjct: 74  IRSIPTL-MIFKDGQRVDTVVGAVPKTTLANTLD 104

[Close]

BLAST of Lcy04g006420 vs. ExPASy TrEMBL
Match: A0A6J1IUF7 (thioredoxin-like protein HCF164, chloroplastic isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111478679 PE=4 SV=1)

HSP 1 Score: 496.9 bits (1278), Expect = 6.2e-137
Identity = 248/272 (91.18%), Postives = 259/272 (95.22%), Query Frame = 0


Query: 1   MNFQMAFTQSCKSPMARFASDSITLHRIPLCFRIPQPLLKPSTARFRSCRRRFSAVACQT 60
           MN QMAFTQSCKSPMARFASDS TLHRIPL FRIPQPLLKP  A FR+ RR+FS + CQT
Sbjct: 1   MNSQMAFTQSCKSPMARFASDSFTLHRIPLSFRIPQPLLKPIAAGFRTSRRKFSGIVCQT 60

Query: 61  VPNPADTSSAAEKSSDGPESVNDSTGQAASSSSNQGFPEFPNKDINRRVAIISTISAVAL 120
           +PNPADTSS AEKSSDGPESV DSTGQ ASSSSNQGFPEFP+K+INRRVAIIST+SA+AL
Sbjct: 61  LPNPADTSSDAEKSSDGPESVGDSTGQTASSSSNQGFPEFPDKNINRRVAIISTVSALAL 120

Query: 121 FLSSRLDFGVSLKDLAAAALPYEEALSNGKPTVVEFYADWCEVCRELAPDVYKVEQQFKD 180
           FLS+RLDFGVSLKDLAAAALPYEEALSNGKPTVVEFYADWCEVCRELAPDVYKVEQQFKD
Sbjct: 121 FLSARLDFGVSLKDLAAAALPYEEALSNGKPTVVEFYADWCEVCRELAPDVYKVEQQFKD 180

Query: 181 RVNFVMLNVDNTKWEQELDEFGVEGIPHFAFLDKQGNEEGNVVGRLPRQYLLENVDALAR 240
           RVNFVMLNVDNTKWEQELDEFGVEGIPHFAFLDKQGNEEGNVVGRLPRQYLLENVDALAR
Sbjct: 181 RVNFVMLNVDNTKWEQELDEFGVEGIPHFAFLDKQGNEEGNVVGRLPRQYLLENVDALAR 240

Query: 241 GEVSIPHARVVGQFSSAEARKVHQVADPRSHG 273
           GE SIPHARVVGQFSSAEARKVHQ++DPRSHG
Sbjct: 241 GEASIPHARVVGQFSSAEARKVHQISDPRSHG 272

[Close]

BLAST of Lcy04g006420 vs. ExPASy TrEMBL
Match: A0A6J1IRD5 (thioredoxin-like protein HCF164, chloroplastic isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111478679 PE=4 SV=1)

HSP 1 Score: 496.9 bits (1278), Expect = 6.2e-137
Identity = 248/272 (91.18%), Postives = 259/272 (95.22%), Query Frame = 0


Query: 1   MNFQMAFTQSCKSPMARFASDSITLHRIPLCFRIPQPLLKPSTARFRSCRRRFSAVACQT 60
           MN QMAFTQSCKSPMARFASDS TLHRIPL FRIPQPLLKP  A FR+ RR+FS + CQT
Sbjct: 19  MNSQMAFTQSCKSPMARFASDSFTLHRIPLSFRIPQPLLKPIAAGFRTSRRKFSGIVCQT 78

Query: 61  VPNPADTSSAAEKSSDGPESVNDSTGQAASSSSNQGFPEFPNKDINRRVAIISTISAVAL 120
           +PNPADTSS AEKSSDGPESV DSTGQ ASSSSNQGFPEFP+K+INRRVAIIST+SA+AL
Sbjct: 79  LPNPADTSSDAEKSSDGPESVGDSTGQTASSSSNQGFPEFPDKNINRRVAIISTVSALAL 138

Query: 121 FLSSRLDFGVSLKDLAAAALPYEEALSNGKPTVVEFYADWCEVCRELAPDVYKVEQQFKD 180
           FLS+RLDFGVSLKDLAAAALPYEEALSNGKPTVVEFYADWCEVCRELAPDVYKVEQQFKD
Sbjct: 139 FLSARLDFGVSLKDLAAAALPYEEALSNGKPTVVEFYADWCEVCRELAPDVYKVEQQFKD 198

Query: 181 RVNFVMLNVDNTKWEQELDEFGVEGIPHFAFLDKQGNEEGNVVGRLPRQYLLENVDALAR 240
           RVNFVMLNVDNTKWEQELDEFGVEGIPHFAFLDKQGNEEGNVVGRLPRQYLLENVDALAR
Sbjct: 199 RVNFVMLNVDNTKWEQELDEFGVEGIPHFAFLDKQGNEEGNVVGRLPRQYLLENVDALAR 258

Query: 241 GEVSIPHARVVGQFSSAEARKVHQVADPRSHG 273
           GE SIPHARVVGQFSSAEARKVHQ++DPRSHG
Sbjct: 259 GEASIPHARVVGQFSSAEARKVHQISDPRSHG 290

[Close]

BLAST of Lcy04g006420 vs. ExPASy TrEMBL
Match: A0A6J1GD67 (thioredoxin-like protein HCF164, chloroplastic isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111453104 PE=4 SV=1)

HSP 1 Score: 496.9 bits (1278), Expect = 6.2e-137
Identity = 248/272 (91.18%), Postives = 259/272 (95.22%), Query Frame = 0


Query: 1   MNFQMAFTQSCKSPMARFASDSITLHRIPLCFRIPQPLLKPSTARFRSCRRRFSAVACQT 60
           MN QMAFTQSCKSPMARFASDS TLHRIPL FRIPQPLLKP  A FR+ RR+FS + CQT
Sbjct: 1   MNSQMAFTQSCKSPMARFASDSFTLHRIPLSFRIPQPLLKPIAAGFRTSRRKFSGIVCQT 60

Query: 61  VPNPADTSSAAEKSSDGPESVNDSTGQAASSSSNQGFPEFPNKDINRRVAIISTISAVAL 120
           +PNPADTSS AEKSSDGPESV DSTGQ ASSSSNQGFPEFP+K+INRRVAIIST+SA+AL
Sbjct: 61  LPNPADTSSDAEKSSDGPESVGDSTGQTASSSSNQGFPEFPDKNINRRVAIISTVSALAL 120

Query: 121 FLSSRLDFGVSLKDLAAAALPYEEALSNGKPTVVEFYADWCEVCRELAPDVYKVEQQFKD 180
           FLS+RLDFGVSLKDLAAAALPYEEALSNGKPTVVEFYADWCEVCRELAPDVYKVEQQFKD
Sbjct: 121 FLSARLDFGVSLKDLAAAALPYEEALSNGKPTVVEFYADWCEVCRELAPDVYKVEQQFKD 180

Query: 181 RVNFVMLNVDNTKWEQELDEFGVEGIPHFAFLDKQGNEEGNVVGRLPRQYLLENVDALAR 240
           RVNFVMLNVDNTKWEQELDEFGVEGIPHFAFLDKQGNEEGNVVGRLPRQYLLENVDALAR
Sbjct: 181 RVNFVMLNVDNTKWEQELDEFGVEGIPHFAFLDKQGNEEGNVVGRLPRQYLLENVDALAR 240

Query: 241 GEVSIPHARVVGQFSSAEARKVHQVADPRSHG 273
           GE SIPHARVVGQFSSAEARKVHQ++DPRSHG
Sbjct: 241 GEASIPHARVVGQFSSAEARKVHQISDPRSHG 272

[Close]

BLAST of Lcy04g006420 vs. ExPASy TrEMBL
Match: A0A6J1GD45 (thioredoxin-like protein HCF164, chloroplastic isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111453104 PE=4 SV=1)

HSP 1 Score: 496.9 bits (1278), Expect = 6.2e-137
Identity = 248/272 (91.18%), Postives = 259/272 (95.22%), Query Frame = 0


Query: 1   MNFQMAFTQSCKSPMARFASDSITLHRIPLCFRIPQPLLKPSTARFRSCRRRFSAVACQT 60
           MN QMAFTQSCKSPMARFASDS TLHRIPL FRIPQPLLKP  A FR+ RR+FS + CQT
Sbjct: 50  MNSQMAFTQSCKSPMARFASDSFTLHRIPLSFRIPQPLLKPIAAGFRTSRRKFSGIVCQT 109

Query: 61  VPNPADTSSAAEKSSDGPESVNDSTGQAASSSSNQGFPEFPNKDINRRVAIISTISAVAL 120
           +PNPADTSS AEKSSDGPESV DSTGQ ASSSSNQGFPEFP+K+INRRVAIIST+SA+AL
Sbjct: 110 LPNPADTSSDAEKSSDGPESVGDSTGQTASSSSNQGFPEFPDKNINRRVAIISTVSALAL 169

Query: 121 FLSSRLDFGVSLKDLAAAALPYEEALSNGKPTVVEFYADWCEVCRELAPDVYKVEQQFKD 180
           FLS+RLDFGVSLKDLAAAALPYEEALSNGKPTVVEFYADWCEVCRELAPDVYKVEQQFKD
Sbjct: 170 FLSARLDFGVSLKDLAAAALPYEEALSNGKPTVVEFYADWCEVCRELAPDVYKVEQQFKD 229

Query: 181 RVNFVMLNVDNTKWEQELDEFGVEGIPHFAFLDKQGNEEGNVVGRLPRQYLLENVDALAR 240
           RVNFVMLNVDNTKWEQELDEFGVEGIPHFAFLDKQGNEEGNVVGRLPRQYLLENVDALAR
Sbjct: 230 RVNFVMLNVDNTKWEQELDEFGVEGIPHFAFLDKQGNEEGNVVGRLPRQYLLENVDALAR 289

Query: 241 GEVSIPHARVVGQFSSAEARKVHQVADPRSHG 273
           GE SIPHARVVGQFSSAEARKVHQ++DPRSHG
Sbjct: 290 GEASIPHARVVGQFSSAEARKVHQISDPRSHG 321

[Close]

BLAST of Lcy04g006420 vs. ExPASy TrEMBL
Match: A0A6J1BZ16 (thioredoxin-like protein HCF164, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111005981 PE=4 SV=1)

HSP 1 Score: 479.9 bits (1234), Expect = 7.9e-132
Identity = 241/272 (88.60%), Postives = 260/272 (95.59%), Query Frame = 0


Query: 5   MAFTQSCKSPMARFASDSITLHRIPLCFRIPQPLL----KPSTARFRSCRRRFSAVACQT 64
           MAFTQSCKSPM   AS+SITLHRIPLCFRIPQP L    KPS ARFR+ RRRFSA+ACQT
Sbjct: 1   MAFTQSCKSPM---ASNSITLHRIPLCFRIPQPQLQPFPKPSAARFRTYRRRFSAIACQT 60

Query: 65  VPNPADTSSAAEKSSDGPESVNDSTGQAASSSSNQGFPEFPNKDINRRVAIISTISAVAL 124
           VPNPADTSSAAE S+DGPESV+DSTGQAASSS+N GFPEFPNK+INR++A++ST+SA+AL
Sbjct: 61  VPNPADTSSAAENSADGPESVDDSTGQAASSSTNNGFPEFPNKNINRQIAVVSTLSALAL 120

Query: 125 FLSSRLDFGVSLKDLAAAALPYEEALSNGKPTVVEFYADWCEVCRELAPDVYKVEQQFKD 184
           FLS+RLDFGVSLKDLAAAALPYEEALSNGKPTVVEFYADWCEVCRELAPDV+KVEQQ+KD
Sbjct: 121 FLSARLDFGVSLKDLAAAALPYEEALSNGKPTVVEFYADWCEVCRELAPDVFKVEQQYKD 180

Query: 185 RVNFVMLNVDNTKWEQELDEFGVEGIPHFAFLDKQGNEEGNVVGRLPRQYLLENVDALAR 244
           RVNFVMLNVDNTKWEQELDEFGVEGIPHFAFLDKQGNEEGNVVGRLPR+YLLENVDALAR
Sbjct: 181 RVNFVMLNVDNTKWEQELDEFGVEGIPHFAFLDKQGNEEGNVVGRLPRKYLLENVDALAR 240

Query: 245 GEVSIPHARVVGQFSSAEARKVHQVADPRSHG 273
           G+VSIPHARVVGQFSSAEARKVHQ+ADPRSHG
Sbjct: 241 GQVSIPHARVVGQFSSAEARKVHQIADPRSHG 269

[Close]

BLAST of Lcy04g006420 vs. NCBI nr
Match: XP_022978845.1 (thioredoxin-like protein HCF164, chloroplastic isoform X1 [Cucurbita maxima] >XP_022978846.1 thioredoxin-like protein HCF164, chloroplastic isoform X2 [Cucurbita maxima])

HSP 1 Score: 496.9 bits (1278), Expect = 1.3e-136
Identity = 248/272 (91.18%), Postives = 259/272 (95.22%), Query Frame = 0


Query: 1   MNFQMAFTQSCKSPMARFASDSITLHRIPLCFRIPQPLLKPSTARFRSCRRRFSAVACQT 60
           MN QMAFTQSCKSPMARFASDS TLHRIPL FRIPQPLLKP  A FR+ RR+FS + CQT
Sbjct: 19  MNSQMAFTQSCKSPMARFASDSFTLHRIPLSFRIPQPLLKPIAAGFRTSRRKFSGIVCQT 78

Query: 61  VPNPADTSSAAEKSSDGPESVNDSTGQAASSSSNQGFPEFPNKDINRRVAIISTISAVAL 120
           +PNPADTSS AEKSSDGPESV DSTGQ ASSSSNQGFPEFP+K+INRRVAIIST+SA+AL
Sbjct: 79  LPNPADTSSDAEKSSDGPESVGDSTGQTASSSSNQGFPEFPDKNINRRVAIISTVSALAL 138

Query: 121 FLSSRLDFGVSLKDLAAAALPYEEALSNGKPTVVEFYADWCEVCRELAPDVYKVEQQFKD 180
           FLS+RLDFGVSLKDLAAAALPYEEALSNGKPTVVEFYADWCEVCRELAPDVYKVEQQFKD
Sbjct: 139 FLSARLDFGVSLKDLAAAALPYEEALSNGKPTVVEFYADWCEVCRELAPDVYKVEQQFKD 198

Query: 181 RVNFVMLNVDNTKWEQELDEFGVEGIPHFAFLDKQGNEEGNVVGRLPRQYLLENVDALAR 240
           RVNFVMLNVDNTKWEQELDEFGVEGIPHFAFLDKQGNEEGNVVGRLPRQYLLENVDALAR
Sbjct: 199 RVNFVMLNVDNTKWEQELDEFGVEGIPHFAFLDKQGNEEGNVVGRLPRQYLLENVDALAR 258

Query: 241 GEVSIPHARVVGQFSSAEARKVHQVADPRSHG 273
           GE SIPHARVVGQFSSAEARKVHQ++DPRSHG
Sbjct: 259 GEASIPHARVVGQFSSAEARKVHQISDPRSHG 290

[Close]

BLAST of Lcy04g006420 vs. NCBI nr
Match: XP_022949822.1 (thioredoxin-like protein HCF164, chloroplastic isoform X2 [Cucurbita moschata] >XP_022949823.1 thioredoxin-like protein HCF164, chloroplastic isoform X2 [Cucurbita moschata] >XP_022978848.1 thioredoxin-like protein HCF164, chloroplastic isoform X3 [Cucurbita maxima] >XP_022978849.1 thioredoxin-like protein HCF164, chloroplastic isoform X3 [Cucurbita maxima])

HSP 1 Score: 496.9 bits (1278), Expect = 1.3e-136
Identity = 248/272 (91.18%), Postives = 259/272 (95.22%), Query Frame = 0


Query: 1   MNFQMAFTQSCKSPMARFASDSITLHRIPLCFRIPQPLLKPSTARFRSCRRRFSAVACQT 60
           MN QMAFTQSCKSPMARFASDS TLHRIPL FRIPQPLLKP  A FR+ RR+FS + CQT
Sbjct: 1   MNSQMAFTQSCKSPMARFASDSFTLHRIPLSFRIPQPLLKPIAAGFRTSRRKFSGIVCQT 60

Query: 61  VPNPADTSSAAEKSSDGPESVNDSTGQAASSSSNQGFPEFPNKDINRRVAIISTISAVAL 120
           +PNPADTSS AEKSSDGPESV DSTGQ ASSSSNQGFPEFP+K+INRRVAIIST+SA+AL
Sbjct: 61  LPNPADTSSDAEKSSDGPESVGDSTGQTASSSSNQGFPEFPDKNINRRVAIISTVSALAL 120

Query: 121 FLSSRLDFGVSLKDLAAAALPYEEALSNGKPTVVEFYADWCEVCRELAPDVYKVEQQFKD 180
           FLS+RLDFGVSLKDLAAAALPYEEALSNGKPTVVEFYADWCEVCRELAPDVYKVEQQFKD
Sbjct: 121 FLSARLDFGVSLKDLAAAALPYEEALSNGKPTVVEFYADWCEVCRELAPDVYKVEQQFKD 180

Query: 181 RVNFVMLNVDNTKWEQELDEFGVEGIPHFAFLDKQGNEEGNVVGRLPRQYLLENVDALAR 240
           RVNFVMLNVDNTKWEQELDEFGVEGIPHFAFLDKQGNEEGNVVGRLPRQYLLENVDALAR
Sbjct: 181 RVNFVMLNVDNTKWEQELDEFGVEGIPHFAFLDKQGNEEGNVVGRLPRQYLLENVDALAR 240

Query: 241 GEVSIPHARVVGQFSSAEARKVHQVADPRSHG 273
           GE SIPHARVVGQFSSAEARKVHQ++DPRSHG
Sbjct: 241 GEASIPHARVVGQFSSAEARKVHQISDPRSHG 272

[Close]

BLAST of Lcy04g006420 vs. NCBI nr
Match: XP_022949821.1 (thioredoxin-like protein HCF164, chloroplastic isoform X1 [Cucurbita moschata])

HSP 1 Score: 496.9 bits (1278), Expect = 1.3e-136
Identity = 248/272 (91.18%), Postives = 259/272 (95.22%), Query Frame = 0


Query: 1   MNFQMAFTQSCKSPMARFASDSITLHRIPLCFRIPQPLLKPSTARFRSCRRRFSAVACQT 60
           MN QMAFTQSCKSPMARFASDS TLHRIPL FRIPQPLLKP  A FR+ RR+FS + CQT
Sbjct: 50  MNSQMAFTQSCKSPMARFASDSFTLHRIPLSFRIPQPLLKPIAAGFRTSRRKFSGIVCQT 109

Query: 61  VPNPADTSSAAEKSSDGPESVNDSTGQAASSSSNQGFPEFPNKDINRRVAIISTISAVAL 120
           +PNPADTSS AEKSSDGPESV DSTGQ ASSSSNQGFPEFP+K+INRRVAIIST+SA+AL
Sbjct: 110 LPNPADTSSDAEKSSDGPESVGDSTGQTASSSSNQGFPEFPDKNINRRVAIISTVSALAL 169

Query: 121 FLSSRLDFGVSLKDLAAAALPYEEALSNGKPTVVEFYADWCEVCRELAPDVYKVEQQFKD 180
           FLS+RLDFGVSLKDLAAAALPYEEALSNGKPTVVEFYADWCEVCRELAPDVYKVEQQFKD
Sbjct: 170 FLSARLDFGVSLKDLAAAALPYEEALSNGKPTVVEFYADWCEVCRELAPDVYKVEQQFKD 229

Query: 181 RVNFVMLNVDNTKWEQELDEFGVEGIPHFAFLDKQGNEEGNVVGRLPRQYLLENVDALAR 240
           RVNFVMLNVDNTKWEQELDEFGVEGIPHFAFLDKQGNEEGNVVGRLPRQYLLENVDALAR
Sbjct: 230 RVNFVMLNVDNTKWEQELDEFGVEGIPHFAFLDKQGNEEGNVVGRLPRQYLLENVDALAR 289

Query: 241 GEVSIPHARVVGQFSSAEARKVHQVADPRSHG 273
           GE SIPHARVVGQFSSAEARKVHQ++DPRSHG
Sbjct: 290 GEASIPHARVVGQFSSAEARKVHQISDPRSHG 321

[Close]

BLAST of Lcy04g006420 vs. NCBI nr
Match: XP_023543853.1 (thioredoxin-like protein HCF164, chloroplastic isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 495.4 bits (1274), Expect = 3.7e-136
Identity = 247/272 (90.81%), Postives = 258/272 (94.85%), Query Frame = 0


Query: 1   MNFQMAFTQSCKSPMARFASDSITLHRIPLCFRIPQPLLKPSTARFRSCRRRFSAVACQT 60
           MN QMAFTQSCKSPMARFASDS TLHRIPL FRIPQPLLKP  A FR+ RR+FS + CQT
Sbjct: 1   MNSQMAFTQSCKSPMARFASDSFTLHRIPLSFRIPQPLLKPIAAGFRTSRRKFSGIVCQT 60

Query: 61  VPNPADTSSAAEKSSDGPESVNDSTGQAASSSSNQGFPEFPNKDINRRVAIISTISAVAL 120
           +PNPADTSS AEKSSDGPESV DSTGQ ASSSSNQGFPEFP+K+INRRVAIIST+SA+AL
Sbjct: 61  LPNPADTSSDAEKSSDGPESVGDSTGQTASSSSNQGFPEFPDKNINRRVAIISTVSALAL 120

Query: 121 FLSSRLDFGVSLKDLAAAALPYEEALSNGKPTVVEFYADWCEVCRELAPDVYKVEQQFKD 180
           FLS+RLDFGVSLKDLAAAALPYEEALSNGKPTVVEFYADWCEVCRELAPDVYK EQQFKD
Sbjct: 121 FLSARLDFGVSLKDLAAAALPYEEALSNGKPTVVEFYADWCEVCRELAPDVYKAEQQFKD 180

Query: 181 RVNFVMLNVDNTKWEQELDEFGVEGIPHFAFLDKQGNEEGNVVGRLPRQYLLENVDALAR 240
           RVNFVMLNVDNTKWEQELDEFGVEGIPHFAFLDKQGNEEGNVVGRLPRQYLLENVDALAR
Sbjct: 181 RVNFVMLNVDNTKWEQELDEFGVEGIPHFAFLDKQGNEEGNVVGRLPRQYLLENVDALAR 240

Query: 241 GEVSIPHARVVGQFSSAEARKVHQVADPRSHG 273
           GE SIPHARVVGQFSSAEARKVHQ++DPRSHG
Sbjct: 241 GEASIPHARVVGQFSSAEARKVHQISDPRSHG 272

[Close]

BLAST of Lcy04g006420 vs. NCBI nr
Match: XP_023543852.1 (thioredoxin-like protein HCF164, chloroplastic isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 495.4 bits (1274), Expect = 3.7e-136
Identity = 247/272 (90.81%), Postives = 258/272 (94.85%), Query Frame = 0


Query: 1   MNFQMAFTQSCKSPMARFASDSITLHRIPLCFRIPQPLLKPSTARFRSCRRRFSAVACQT 60
           MN QMAFTQSCKSPMARFASDS TLHRIPL FRIPQPLLKP  A FR+ RR+FS + CQT
Sbjct: 19  MNSQMAFTQSCKSPMARFASDSFTLHRIPLSFRIPQPLLKPIAAGFRTSRRKFSGIVCQT 78

Query: 61  VPNPADTSSAAEKSSDGPESVNDSTGQAASSSSNQGFPEFPNKDINRRVAIISTISAVAL 120
           +PNPADTSS AEKSSDGPESV DSTGQ ASSSSNQGFPEFP+K+INRRVAIIST+SA+AL
Sbjct: 79  LPNPADTSSDAEKSSDGPESVGDSTGQTASSSSNQGFPEFPDKNINRRVAIISTVSALAL 138

Query: 121 FLSSRLDFGVSLKDLAAAALPYEEALSNGKPTVVEFYADWCEVCRELAPDVYKVEQQFKD 180
           FLS+RLDFGVSLKDLAAAALPYEEALSNGKPTVVEFYADWCEVCRELAPDVYK EQQFKD
Sbjct: 139 FLSARLDFGVSLKDLAAAALPYEEALSNGKPTVVEFYADWCEVCRELAPDVYKAEQQFKD 198

Query: 181 RVNFVMLNVDNTKWEQELDEFGVEGIPHFAFLDKQGNEEGNVVGRLPRQYLLENVDALAR 240
           RVNFVMLNVDNTKWEQELDEFGVEGIPHFAFLDKQGNEEGNVVGRLPRQYLLENVDALAR
Sbjct: 199 RVNFVMLNVDNTKWEQELDEFGVEGIPHFAFLDKQGNEEGNVVGRLPRQYLLENVDALAR 258

Query: 241 GEVSIPHARVVGQFSSAEARKVHQVADPRSHG 273
           GE SIPHARVVGQFSSAEARKVHQ++DPRSHG
Sbjct: 259 GEASIPHARVVGQFSSAEARKVHQISDPRSHG 290

[Close]

BLAST of Lcy04g006420 vs. TAIR 10
Match: AT4G37200.1 (Thioredoxin superfamily protein )

HSP 1 Score: 326.6 bits (836), Expect = 2.1e-89
Identity = 165/229 (72.05%), Postives = 193/229 (84.28%), Query Frame = 0


Query: 52  RFSAVACQTVPNPADTSSAAEK--------SSDGPESVNDSTGQAASSSSNQGFPEFPNK 111
           RF AV C+  PNP  + +  EK        SS   E  + S+   +SSSS+ GFPE PNK
Sbjct: 35  RFRAVRCK--PNPESSETKQEKLVIDNGETSSASKEVESSSSVADSSSSSSSGFPESPNK 94

Query: 112 DINRRVAIISTISAVALFLSSRLDFGVSLKDLAAAALPYEEALSNGKPTVVEFYADWCEV 171
           DINRRVA ++ I+A++LF+S+RLDFG+SLKDL A+ALPYEEALSNGKPTVVEFYADWCEV
Sbjct: 95  DINRRVAAVTVIAALSLFVSTRLDFGISLKDLTASALPYEEALSNGKPTVVEFYADWCEV 154

Query: 172 CRELAPDVYKVEQQFKDRVNFVMLNVDNTKWEQELDEFGVEGIPHFAFLDKQGNEEGNVV 231
           CRELAPDVYK+EQQ+KD+VNFVMLNVDNTKWEQELDEFGVEGIPHFAFLD++GNEEGNVV
Sbjct: 155 CRELAPDVYKIEQQYKDKVNFVMLNVDNTKWEQELDEFGVEGIPHFAFLDREGNEEGNVV 214

Query: 232 GRLPRQYLLENVDALARGEVSIPHARVVGQFSSAEARKVHQVADPRSHG 273
           GRLPRQYL+ENV+ALA G+ SIP+AR VGQ+SS+E+RKVHQV DP SHG
Sbjct: 215 GRLPRQYLVENVNALAAGKQSIPYARAVGQYSSSESRKVHQVTDPLSHG 261

[Close]

BLAST of Lcy04g006420 vs. TAIR 10
Match: AT2G47470.2 (thioredoxin family protein )

HSP 1 Score: 55.1 bits (131), Expect = 1.2e-07
Identity = 29/79 (36.71%), Postives = 39/79 (49.37%), Query Frame = 0


Query: 143 EEALSNGKPTVVEFYADWCEVCRELAPDVYKVEQQFKDRVNFVMLNVDNTKWEQELDEFG 202
           E  L   K  +VEFYA WC  C+ LAP   KV   FK     V+ N+D    +   +++G
Sbjct: 153 EIVLDQNKDVLVEFYAPWCGHCKSLAPTYEKVATVFKQEEGVVIANLDADAHKALGEKYG 212

Query: 203 VEGIPHFAFLDKQGNEEGN 222
           V G P   F  K  N+ G+
Sbjct: 213 VSGFPTLKFFPKD-NKAGH 230

[Close]

BLAST of Lcy04g006420 vs. TAIR 10
Match: AT2G47470.1 (thioredoxin family protein )

HSP 1 Score: 55.1 bits (131), Expect = 1.2e-07
Identity = 29/79 (36.71%), Postives = 39/79 (49.37%), Query Frame = 0


Query: 143 EEALSNGKPTVVEFYADWCEVCRELAPDVYKVEQQFKDRVNFVMLNVDNTKWEQELDEFG 202
           E  L   K  +VEFYA WC  C+ LAP   KV   FK     V+ N+D    +   +++G
Sbjct: 153 EIVLDQNKDVLVEFYAPWCGHCKSLAPTYEKVATVFKQEEGVVIANLDADAHKALGEKYG 212

Query: 203 VEGIPHFAFLDKQGNEEGN 222
           V G P   F  K  N+ G+
Sbjct: 213 VSGFPTLKFFPKD-NKAGH 230

[Close]

BLAST of Lcy04g006420 vs. TAIR 10
Match: AT2G47470.3 (thioredoxin family protein )

HSP 1 Score: 55.1 bits (131), Expect = 1.2e-07
Identity = 29/79 (36.71%), Postives = 39/79 (49.37%), Query Frame = 0


Query: 143 EEALSNGKPTVVEFYADWCEVCRELAPDVYKVEQQFKDRVNFVMLNVDNTKWEQELDEFG 202
           E  L   K  +VEFYA WC  C+ LAP   KV   FK     V+ N+D    +   +++G
Sbjct: 153 EIVLDQNKDVLVEFYAPWCGHCKSLAPTYEKVATVFKQEEGVVIANLDADAHKALGEKYG 212

Query: 203 VEGIPHFAFLDKQGNEEGN 222
           V G P   F  K  N+ G+
Sbjct: 213 VSGFPTLKFFPKD-NKAGH 230

[Close]

BLAST of Lcy04g006420 vs. TAIR 10
Match: AT2G47470.4 (thioredoxin family protein )

HSP 1 Score: 55.1 bits (131), Expect = 1.2e-07
Identity = 29/79 (36.71%), Postives = 39/79 (49.37%), Query Frame = 0


Query: 143 EEALSNGKPTVVEFYADWCEVCRELAPDVYKVEQQFKDRVNFVMLNVDNTKWEQELDEFG 202
           E  L   K  +VEFYA WC  C+ LAP   KV   FK     V+ N+D    +   +++G
Sbjct: 153 EIVLDQNKDVLVEFYAPWCGHCKSLAPTYEKVATVFKQEEGVVIANLDADAHKALGEKYG 212

Query: 203 VEGIPHFAFLDKQGNEEGN 222
           V G P   F  K  N+ G+
Sbjct: 213 VSGFPTLKFFPKD-NKAGH 230

The following BLAST results are available for this feature:

BLAST of Lcy04g006420 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q7Y0D4	1.8e-88	72.84	Thioredoxin-like protein HCF164, chloroplastic OS=Oryza sativa subsp. japonica O...	[more]
O23166	3.0e-88	72.05	Thioredoxin-like protein HCF164, chloroplastic OS=Arabidopsis thaliana OX=3702 G...	[more]
P73920	4.4e-31	41.38	Thiol:disulfide interchange protein TxlA homolog OS=Synechocystis sp. (strain PC...	[more]
P35088	2.7e-28	37.43	Thiol:disulfide interchange protein TxlA OS=Synechococcus elongatus (strain PCC ...	[more]
P12243	1.1e-08	32.98	Thioredoxin 1 OS=Synechococcus elongatus (strain PCC 7942 / FACHB-805) OX=1140 G...	[more]

BLAST of Lcy04g006420 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IUF7	6.2e-137	91.18	thioredoxin-like protein HCF164, chloroplastic isoform X3 OS=Cucurbita maxima OX...	[more]
A0A6J1IRD5	6.2e-137	91.18	thioredoxin-like protein HCF164, chloroplastic isoform X1 OS=Cucurbita maxima OX...	[more]
A0A6J1GD67	6.2e-137	91.18	thioredoxin-like protein HCF164, chloroplastic isoform X2 OS=Cucurbita moschata ...	[more]
A0A6J1GD45	6.2e-137	91.18	thioredoxin-like protein HCF164, chloroplastic isoform X1 OS=Cucurbita moschata ...	[more]
A0A6J1BZ16	7.9e-132	88.60	thioredoxin-like protein HCF164, chloroplastic OS=Momordica charantia OX=3673 GN...	[more]

BLAST of Lcy04g006420 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022978845.1	1.3e-136	91.18	thioredoxin-like protein HCF164, chloroplastic isoform X1 [Cucurbita maxima] >XP...	[more]
XP_022949822.1	1.3e-136	91.18	thioredoxin-like protein HCF164, chloroplastic isoform X2 [Cucurbita moschata] >...	[more]
XP_022949821.1	1.3e-136	91.18	thioredoxin-like protein HCF164, chloroplastic isoform X1 [Cucurbita moschata]	[more]
XP_023543853.1	3.7e-136	90.81	thioredoxin-like protein HCF164, chloroplastic isoform X2 [Cucurbita pepo subsp....	[more]
XP_023543852.1	3.7e-136	90.81	thioredoxin-like protein HCF164, chloroplastic isoform X1 [Cucurbita pepo subsp....	[more]

BLAST of Lcy04g006420 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G37200.1	2.1e-89	72.05	Thioredoxin superfamily protein	[more]
AT2G47470.2	1.2e-07	36.71	thioredoxin family protein	[more]
AT2G47470.1	1.2e-07	36.71	thioredoxin family protein	[more]
AT2G47470.3	1.2e-07	36.71	thioredoxin family protein	[more]
AT2G47470.4	1.2e-07	36.71	thioredoxin family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013766	Thioredoxin domain	PFAM	PF00085	Thioredoxin	coord: 142..236 e-value: 6.0E-20 score: 71.2
IPR013766	Thioredoxin domain	PROSITE	PS51352	THIOREDOXIN_2	coord: 91..240 score: 15.599284
None	No IPR available	GENE3D	3.40.30.10	Glutaredoxin	coord: 135..244 e-value: 2.9E-26 score: 93.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 62..100
None	No IPR available	CDD	cd02950	TxlA	coord: 130..271 e-value: 2.79402E-85 score: 251.102
IPR044241	Thiol:disulfide interchange protein TxlA/HCF164	PANTHER	PTHR47353	THIOREDOXIN-LIKE PROTEIN HCF164, CHLOROPLASTIC	coord: 15..272
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 142..239

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy04g006420.1	Lcy04g006420.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010190	cytochrome b6f complex assembly
cellular_component	GO:0009535	chloroplast thylakoid membrane
molecular_function	GO:0016671	oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor