Lcy03g019060 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy03g019060
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	UBP1-associated proteins 1C-like isoform X3
Location	Chr03: 52653956 .. 52657030 (+)
RNA-Seq Expression	Lcy03g019060
Synteny	Lcy03g019060

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCAAGGTGGCCAAACATTGGGTTCCAAACTCTTAGGAGTTTGAAAAGTGCAAGGTTTTCCTAAAAAAAAAAAGAAAAAAAAAAGTGCAAGGTTTAATTTTGATTTAGATTTGGTTGAATACATTGTGTTAGAACTCTTTAAGGGCAATGTTGGGGTTCCGAATTCTCGAAGGGGGAATCGAGCCACGTAATTTGATCGATATTTGGTTAATACCTCATGTAGAACTCTTTAGGTGGGTTATGAGCATTACTTTTAGTATGTTATTGAAATTTCTAGAGTTATATCTACTTAGTTCTTGTACGTTTGGGTGGATTCTAATAAGTTATTGAACATTTAATTTTGTGTCTTATGTTTAGAGTGTTAGTTCCACTAGGTTAATGTTTACATGTATCAAACATCTGACGAACCTATTTGAAAATTTTCATTCAGTTATTTTAAGCCTTAAATACTATCCTTGTCGTGTCATGTAAGGTCGAGACTTATTTGACATAAAATTGAAAAAAATTAAAAAAAAAAAAGTTTAAAGGTTGTTGTTACATGAGGAAAGTTTGTTTTATATCAACCCGGACCCAATAACAATAACTTCTCTCTATTATATATATATAGTCTTTTTTTTTAGCCTTTAACAAGGAATTAATGAGAAATTATCAAGAAAACCACTACAATGTGCACCATGGTTTGAATGTTTTTTTTTAACATGTGGGATGAAGAGATTGAATTATTTGGTCATTAGAACAAACTTAATATCAGTTGAAATATGCTTATGTTAGCGCTAGATTGAGACATCGACAATCACATAAAAAAAATTCATATTAAAACTAGTTACGAGTGATTATGACGATTATTAAATACATATTTGAGTACACATGACACATTTGATTTTCCGTCATTTAAAAATCACTATAATGCATGCTCTAAATTGAATTCGAATAACCACGGCCGGCTTTCAATGAAACGAAACAATATTACAATGATAAAATAAAATAAAATAAAACCAAATAGTTTGTTTTTCTTTATTAGGATATCTGTCATGATCTTCTTCACTTCACCACGGAAGCCACGTTTTCGTCTCTTTTTATTCTCCTTCCACACTCCCATTTCCATCCTCCTCAACTTTAGTTTCACCAATCTCTCCCTTTGCCTTATCGCCTCGTTTAATTTCTGATGGATTTCAGGTTCCGAGCCATCCACAACAAACCGCCGCCCGCCGCTTCCAGTTCCGGAAGCTCCTCCGATCACCTGCTGCGAGGTTCGTAACCTTAATCGAAATGCTACATATAGAAATAATCTCTCTGTTTAATTTCTTCAGATCTTTTTCAAATGCTTCATCGAAATGGAAACATACATTTCAGTTTTCTAAGAAGATTTAATCTAATAATCTAATCAGATGATTCTCCAAACGCGGAGCTCGTGAAACAGAGGATTAAAGAAGAGATAATGATCAGAGAGATTGCGAGCCGACGAATGCTCGAGGCGGAGATCAGGAGGGAGCTCATCATCGAGCAAGAACTAGCGATGCATAGGGCTGCGGGCCGGACGGAGAGGTTAGCATTGGACGAACATTTTGCAATGCGATTGTTGAACCAGAGGCTGAATCACGTTGTGGATCAGCCTTCCACAGGTCTATTAGCGGTTCCAGGTTTCAGTTCTTCGCTCGACTCCCAAACGATTCGTTCGTTTTCGGAGCCTCGAAAAGAAGAACCGAAGGCTTTGGAAGATGAAAAGGACAAGTTAATTTTGCTGGTTAGTCGAATACTATATCTACTCTCCATATCTCTCCTTATTTGATTCTCAAATTACGTTCATACAGTTTCTGATTTGGATTGAAAGTAGTTTATGATGGTTGACATTATTATGGTGTTAAATAACATTTTGGTTTATAAACATGTGATTTTCTTTCTTCTTCTTCTTTTTTTTTTTTTTTTGTTAGCCTTGAGCTTTGAAAATATCTTGGTTTCAAACTTTTAAGTTTTACTTTATTTAATTTTTAAACTTTTAAAATATTTATTTTTATCCCTAAAATTATAAAATGTAATATATTTTTGAGTTCAACAATATCATTATGTAAATGAATCTTAGTGCATGTTTGGAAGTGATTTTGAAATTGCTAAAATCACTTTTGTCACGTTCGAAATCTCTCTAAAACATACTTTTAATTATGCAAATCAATTTCATGTTTGATTTTACACTTTTAAATGTGATTTACACATCATTAAAATTGATTTTGAATTATAAAGACGTGTTTCGAAATAATTTTGAATACGACAAAAGTGATTTTAACAATTTCAAAATCACTCTCAAACATGCAATTAGATAACAAAATAATTGCTTATGGGAGTTCAATAAATCAAAATAAAACATGGAAAAAGAATGGTGAGATTTAAATTACTTTTCAAACTAAAATGATGTCATTGACCTTGTATTATAGTTGGATAGTAACTGTCATGTATCCTCAACTAAACGTTATCGAAGTAAAAAATAGACATCTGCATATATTATCTAATATATAGGTAATTAGACTAAGGATATATAAACTGGAAGATTGAATAATTATTTATGTTCTGGGAATCGAAATTGCAGCCAAAGCCAGACCCAGAAAAATTCAAAGCGAAGAGGAAAGCCGAGGGTCCACCGACGGAGGCTGATACCAATACAGAGCCATTAATTCCTTCGATTAGTTCGAAGAAATTAGCAAAGAAAGAGTTCATTTGTACAATGTGCAAAATCACAACAACAAGCGAAATTACACTGAATACACACTTAAAAGGCAAGAAGCACAAGGCCAAAGAGGGACGTGGCCTAGAAACTGGGGAAGTCCACAAGCAACCAAGCCCACCGGAACAGGCACCACCCCTTGAAAACAAGGGCAGCTTCAAATTCTGGTGCGAAACGTGCCTAGTTGGAACTCGAAGCTTGGTTGTTATGGAGACACATAACAAGGGGAAGAAGCATAGGGCTCGCCTTTTGAAACTTGGTCAGTGCAAATTGGACGAGCAAAAGGAACCGAATGGGCTTATGTCTTGTGCATCCCCAGAAGGAAGAGGAGATGACTCAAATTCCATCACCTTATAA

mRNA sequence

ATGTCAAGGTGGCCAAACATTGGGTTCCAAACTCTTAGGAGTTTGAAAAGTGCAAGGTTCCGAGCCATCCACAACAAACCGCCGCCCGCCGCTTCCAGTTCCGGAAGCTCCTCCGATCACCTGCTGCGAGATGATTCTCCAAACGCGGAGCTCGTGAAACAGAGGATTAAAGAAGAGATAATGATCAGAGAGATTGCGAGCCGACGAATGCTCGAGGCGGAGATCAGGAGGGAGCTCATCATCGAGCAAGAACTAGCGATGCATAGGGCTGCGGGCCGGACGGAGAGGTTAGCATTGGACGAACATTTTGCAATGCGATTGTTGAACCAGAGGCTGAATCACGTTGTGGATCAGCCTTCCACAGGTCTATTAGCGGTTCCAGGTTTCAGTTCTTCGCTCGACTCCCAAACGATTCGTTCGTTTTCGGAGCCTCGAAAAGAAGAACCGAAGGCTTTGGAAGATGAAAAGGACAAGTTAATTTTGCTGCCAAAGCCAGACCCAGAAAAATTCAAAGCGAAGAGGAAAGCCGAGGGTCCACCGACGGAGGCTGATACCAATACAGAGCCATTAATTCCTTCGATTAGTTCGAAGAAATTAGCAAAGAAAGAGTTCATTTGTACAATGTGCAAAATCACAACAACAAGCGAAATTACACTGAATACACACTTAAAAGGCAAGAAGCACAAGGCCAAAGAGGGACGTGGCCTAGAAACTGGGGAAGTCCACAAGCAACCAAGCCCACCGGAACAGGCACCACCCCTTGAAAACAAGGGCAGCTTCAAATTCTGGTGCGAAACGTGCCTAGTTGGAACTCGAAGCTTGGTTGTTATGGAGACACATAACAAGGGGAAGAAGCATAGGGCTCGCCTTTTGAAACTTGGTCAGTGCAAATTGGACGAGCAAAAGGAACCGAATGGGCTTATGTCTTGTGCATCCCCAGAAGGAAGAGGAGATGACTCAAATTCCATCACCTTATAA

Coding sequence (CDS)

ATGTCAAGGTGGCCAAACATTGGGTTCCAAACTCTTAGGAGTTTGAAAAGTGCAAGGTTCCGAGCCATCCACAACAAACCGCCGCCCGCCGCTTCCAGTTCCGGAAGCTCCTCCGATCACCTGCTGCGAGATGATTCTCCAAACGCGGAGCTCGTGAAACAGAGGATTAAAGAAGAGATAATGATCAGAGAGATTGCGAGCCGACGAATGCTCGAGGCGGAGATCAGGAGGGAGCTCATCATCGAGCAAGAACTAGCGATGCATAGGGCTGCGGGCCGGACGGAGAGGTTAGCATTGGACGAACATTTTGCAATGCGATTGTTGAACCAGAGGCTGAATCACGTTGTGGATCAGCCTTCCACAGGTCTATTAGCGGTTCCAGGTTTCAGTTCTTCGCTCGACTCCCAAACGATTCGTTCGTTTTCGGAGCCTCGAAAAGAAGAACCGAAGGCTTTGGAAGATGAAAAGGACAAGTTAATTTTGCTGCCAAAGCCAGACCCAGAAAAATTCAAAGCGAAGAGGAAAGCCGAGGGTCCACCGACGGAGGCTGATACCAATACAGAGCCATTAATTCCTTCGATTAGTTCGAAGAAATTAGCAAAGAAAGAGTTCATTTGTACAATGTGCAAAATCACAACAACAAGCGAAATTACACTGAATACACACTTAAAAGGCAAGAAGCACAAGGCCAAAGAGGGACGTGGCCTAGAAACTGGGGAAGTCCACAAGCAACCAAGCCCACCGGAACAGGCACCACCCCTTGAAAACAAGGGCAGCTTCAAATTCTGGTGCGAAACGTGCCTAGTTGGAACTCGAAGCTTGGTTGTTATGGAGACACATAACAAGGGGAAGAAGCATAGGGCTCGCCTTTTGAAACTTGGTCAGTGCAAATTGGACGAGCAAAAGGAACCGAATGGGCTTATGTCTTGTGCATCCCCAGAAGGAAGAGGAGATGACTCAAATTCCATCACCTTATAA

Protein sequence

MSRWPNIGFQTLRSLKSARFRAIHNKPPPAASSSGSSSDHLLRDDSPNAELVKQRIKEEIMIREIASRRMLEAEIRRELIIEQELAMHRAAGRTERLALDEHFAMRLLNQRLNHVVDQPSTGLLAVPGFSSSLDSQTIRSFSEPRKEEPKALEDEKDKLILLPKPDPEKFKAKRKAEGPPTEADTNTEPLIPSISSKKLAKKEFICTMCKITTTSEITLNTHLKGKKHKAKEGRGLETGEVHKQPSPPEQAPPLENKGSFKFWCETCLVGTRSLVVMETHNKGKKHRARLLKLGQCKLDEQKEPNGLMSCASPEGRGDDSNSITL

Homology

[Close]

BLAST of Lcy03g019060 vs. ExPASy Swiss-Prot
Match: Q8VD12 (Zinc finger protein 385A OS=Mus musculus OX=10090 GN=Znf385a PE=1 SV=2)

HSP 1 Score: 48.5 bits (114), Expect = 1.6e-04
Identity = 42/153 (27.45%), Postives = 60/153 (39.22%), Query Frame = 0


Query: 163 PKPDPEKFKAKRKAEGPPTEADTNTEPLIP--SISSKKLAKKEFICTMCKITTTSEITLN 222
           P   PE  +   K EG      T+    +P  S   ++ AK+   C +CK+   S   L 
Sbjct: 163 PPSVPESGQGVTKGEG-----GTSVPASLPGGSKEEEEKAKRLLYCALCKVAVNSLSQLE 222

Query: 223 THLKGKKHKA--KEGRGLETGEVHKQPSPPEQAPPLENKGSFKFWCETCLVGTRSLVVME 282
            H KG KHK   +   GL   + + +  PP    P        F CE C V   S V ++
Sbjct: 223 AHNKGTKHKTILEARSGLGPIKAYPRLGPPTPGEPEAPAQDRTFHCEICNVKVNSEVQLK 282

Query: 283 THNKGKKHRARLLKLGQCKLDEQKEPNGLMSCA 312
            H   ++HR  +       L   K+P G    A
Sbjct: 283 QHISSRRHRDGVAGKPNPLLSRHKKPRGAAELA 310

[Close]

BLAST of Lcy03g019060 vs. ExPASy TrEMBL
Match: A0A5D3B800 (UBP1-associated proteins 1C-like isoform X3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold271G00520 PE=4 SV=1)

HSP 1 Score: 236.5 bits (602), Expect = 1.6e-58
Identity = 153/313 (48.88%), Postives = 193/313 (61.66%), Query Frame = 0


Query: 19  RFRAIHNKPPPAASSSGSSSDHLLRDDSPNAELVKQRIKEEIMIREIASRRMLEAEIRRE 78
           RFRAI NK P  A+   S+SD  ++DDS N EL KQRIKEEI +REI  RRMLEAEIRRE
Sbjct: 4   RFRAIDNKSPATAA---STSDQPIQDDSLNEELWKQRIKEEITMREIVRRRMLEAEIRRE 63

Query: 79  LIIEQELAMHRAAGRTE-RLALDEHFAMRLLNQRLNHVVD-QPSTGLLAVPGFSSSLDSQ 138
           L++E+ELA+ RA G+TE  L+ D  F +R +N+ +N ++D   ST LLAVPG +SSL+  
Sbjct: 64  LLVERELAIRRARGQTEGLLSFDNQFLVRFMNEGVNRILDPSSSTALLAVPGSNSSLN-- 123

Query: 139 TIRSFSEPRKEEPKALEDEKDKLILLPKPDPEKFKAKRKAEGPPTEADT--------NTE 198
                    KEEPK  EDE +KLI L +PDP KF  KRKA G    A            +
Sbjct: 124 --------LKEEPKPEEDEMNKLITLERPDPGKFVGKRKAVGDQEAAAAMGGGGERDQRQ 183

Query: 199 PLIPS--ISSKKLAKKEFICTMCKITTTSEITLNTHLKGKKHKAKEGRGLETGEVHKQPS 258
            +IP+  I SKKLAK+EF+C+MC +  TSEI+ N H+ GKKHKAKEGR       HK+P+
Sbjct: 184 TIIPTPWIGSKKLAKEEFVCSMCNVKATSEISFNAHINGKKHKAKEGRRQVQQTTHKEPN 243

Query: 259 PPEQ---------------APPLENKGSFKFWCETCLVGTRSLVVMETHNKGKKHRARLL 304
             E+                P LE     KF CE C VG   + VM +HN G+KH+ARLL
Sbjct: 244 QGEEDLKEKLDHPVKNIDKNPALEKNKRLKFRCEICNVGVPWMAVMVSHNNGRKHKARLL 303

[Close]

BLAST of Lcy03g019060 vs. ExPASy TrEMBL
Match: A0A1S3B9S7 (uncharacterized protein LOC103487343 OS=Cucumis melo OX=3656 GN=LOC103487343 PE=4 SV=1)

HSP 1 Score: 236.5 bits (602), Expect = 1.6e-58
Identity = 153/313 (48.88%), Postives = 193/313 (61.66%), Query Frame = 0


Query: 19  RFRAIHNKPPPAASSSGSSSDHLLRDDSPNAELVKQRIKEEIMIREIASRRMLEAEIRRE 78
           RFRAI NK P  A+   S+SD  ++DDS N EL KQRIKEEI +REI  RRMLEAEIRRE
Sbjct: 4   RFRAIDNKSPATAA---STSDQPIQDDSLNEELWKQRIKEEITMREIVRRRMLEAEIRRE 63

Query: 79  LIIEQELAMHRAAGRTE-RLALDEHFAMRLLNQRLNHVVD-QPSTGLLAVPGFSSSLDSQ 138
           L++E+ELA+ RA G+TE  L+ D  F +R +N+ +N ++D   ST LLAVPG +SSL+  
Sbjct: 64  LLVERELAIRRARGQTEGLLSFDNQFLVRFMNEGVNRILDPSSSTALLAVPGSNSSLN-- 123

Query: 139 TIRSFSEPRKEEPKALEDEKDKLILLPKPDPEKFKAKRKAEGPPTEADT--------NTE 198
                    KEEPK  EDE +KLI L +PDP KF  KRKA G    A            +
Sbjct: 124 --------LKEEPKPEEDEMNKLITLERPDPGKFVGKRKAVGDQEAAAAMGGGGERDQRQ 183

Query: 199 PLIPS--ISSKKLAKKEFICTMCKITTTSEITLNTHLKGKKHKAKEGRGLETGEVHKQPS 258
            +IP+  I SKKLAK+EF+C+MC +  TSEI+ N H+ GKKHKAKEGR       HK+P+
Sbjct: 184 TIIPTPWIGSKKLAKEEFVCSMCNVKATSEISFNAHINGKKHKAKEGRRQVQQTTHKEPN 243

Query: 259 PPEQ---------------APPLENKGSFKFWCETCLVGTRSLVVMETHNKGKKHRARLL 304
             E+                P LE     KF CE C VG   + VM +HN G+KH+ARLL
Sbjct: 244 QGEEDLKEKLDHPVKNIDKNPALEKNKRLKFRCEICNVGVPWMAVMVSHNNGRKHKARLL 303

[Close]

BLAST of Lcy03g019060 vs. ExPASy TrEMBL
Match: A0A6J1EJN4 (uncharacterized protein LOC111433915 OS=Cucurbita moschata OX=3662 GN=LOC111433915 PE=4 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 6.0e-34
Identity = 91/118 (77.12%), Postives = 99/118 (83.90%), Query Frame = 0


Query: 19  RFRAIHNKPPPAASSSGSSSDHLLRDDSPNAELVKQRIKEEIMIREIASRRMLEAEIRRE 78
           R RA+ NKP  AASSS  SSDH LRDDSPNAELVKQRIKEEI  RE ASRRMLEAEIRRE
Sbjct: 58  RVRAVDNKPLLAASSSECSSDHPLRDDSPNAELVKQRIKEEITNRETASRRMLEAEIRRE 117

Query: 79  LIIEQELAMHRAAGRTERLALDEHFAMRLLNQRLNHVVDQPST-GLLAVPGFSSSLDS 136
           LIIEQEL++ RA GRTE LA DEHFAMR+L+ RLNH+VDQ S+ GLLAVPG  SSL+S
Sbjct: 118 LIIEQELSILRATGRTEGLAFDEHFAMRMLDLRLNHIVDQSSSRGLLAVPGSCSSLNS 175

[Close]

BLAST of Lcy03g019060 vs. ExPASy TrEMBL
Match: A0A059CKW4 (Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_C00251 PE=4 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 4.9e-28
Identity = 103/278 (37.05%), Postives = 148/278 (53.24%), Query Frame = 0


Query: 39  DHLLRDDSPNAELVKQRIKEEIMIREIASRRMLEAEIRRELIIEQELAMHRAA-GRTERL 98
           D  L  ++   E+ KQ+I+EEI+  E+A R+MLE E+RREL++E+++ + RA  G     
Sbjct: 55  DPYLVRETIQREIEKQKIREEIIASEVARRQMLEEEVRRELMLERQMVLRRAGDGLPFEG 114

Query: 99  ALDEHFAMRLLNQRLNHVVDQPSTGLLAVPGFSSSLDSQTIRS-FSEPRKEEPKALEDEK 158
                F     +  L+ +  +     LA  G ++   S  IRS  + P + +P   E  K
Sbjct: 115 KSTMWFGFNPGHPALHRLESRAMEDHLAFFGHNAVDMSPLIRSPEATPTEIKP---ELNK 174

Query: 159 DKLILLPKPDPEKFKAKRKAEGPPTEADTNTEPLIPSISSKKLAKKEFICTMCKITTTSE 218
           D+LI+LP+PDP    AKRKA     +AD      + + S KK  K+E+ C +C+++ TSE
Sbjct: 175 DRLIMLPRPDPNLSSAKRKASTSSVDADE-----LSTFSQKKKTKEEWTCALCQVSATSE 234

Query: 219 ITLNTHLKGKKHKAKEG--------RGLETGEVH------KQPSPPEQAPPLEN-----K 278
             L  HL+GKKHK KE          G     V+      K  S P+    LEN     K
Sbjct: 235 KGLKEHLEGKKHKTKEASLARKIGKEGTTESRVNQELKDSKMLSRPKMVQNLENTEGSRK 294

Query: 279 GSFKFWCETCLVGTRSLVVMETHNKGKKHRARLLKLGQ 296
            +F+FWC  C +G  S+ VME+H KGKKH ARL +LGQ
Sbjct: 295 KNFQFWCAMCQIGAFSVTVMESHQKGKKHIARLQELGQ 324

[Close]

BLAST of Lcy03g019060 vs. ExPASy TrEMBL
Match: A0A6J1HN47 (uncharacterized protein LOC111465139 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111465139 PE=4 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 3.2e-27
Identity = 81/116 (69.83%), Postives = 91/116 (78.45%), Query Frame = 0


Query: 21  RAIHNKPPPAASSSGSSSDHLLRDDSPNAELVKQRIKEEIMIREIASRRMLEAEIRRELI 80
           RA+ N+P  AASSS  SSDH LRDDSPNAELVKQRIK +I  REIASRRMLEAE R ELI
Sbjct: 6   RAVDNQPLLAASSSECSSDHPLRDDSPNAELVKQRIKGKITNREIASRRMLEAETRMELI 65

Query: 81  IEQELAMHRAAGRTERLALDEHFAMRLLNQRLNHVVDQPSTG-LLAVPGFSSSLDS 136
           IEQEL++ RA G TE LA DEHF MR+L+ RLN +VDQ S+  LLA PG  SSL+S
Sbjct: 66  IEQELSILRATGWTEGLAFDEHFPMRMLDLRLNQIVDQSSSRVLLAAPGSCSSLNS 121

[Close]

BLAST of Lcy03g019060 vs. NCBI nr
Match: XP_038880353.1 (zinc finger protein 385B [Benincasa hispida])

HSP 1 Score: 285.4 bits (729), Expect = 6.1e-73
Identity = 169/302 (55.96%), Postives = 206/302 (68.21%), Query Frame = 0


Query: 19  RFRAIHNKPPPAASSSGSSSDHLLRDDSPNAELVKQRIKEEIMIREIASRRMLEAEIRRE 78
           RFRA  NK P  A+S+   S   L  DS NAEL+KQR+K+EIMIREIASRRMLEAEIRRE
Sbjct: 4   RFRANDNKSPATATSTSVRSFDQLLQDSLNAELLKQRMKDEIMIREIASRRMLEAEIRRE 63

Query: 79  LIIEQELAMHRAAGRTERLALDEHFAMRLLNQ-RLNHVVDQPSTGLLAVPGFSSSLDSQT 138
           LIIEQELA  R  GRTE L  D+ F++RLL+Q R+NH +  P  GLL VPG SSS     
Sbjct: 64  LIIEQELAKRRVEGRTEGLLFDDQFSVRLLDQIRMNHNIVDPFRGLLTVPGSSSS--PLP 123

Query: 139 IRSFSEPRKEEPKALEDEKDKLILLPKPDPEKFKAKRKAEGPPTEADTNTEPLIPSISSK 198
           +     P+ EEPK  +D+K+KLI+LPKPDP KF+ KRKAEG   E DT+ +     ISSK
Sbjct: 124 VCPVPNPQNEEPKPFDDKKNKLIVLPKPDPAKFEGKRKAEGEAAEVDTDQKTPTHWISSK 183

Query: 199 KLAKKEFICTMCKITTTSEITLNTHLKGKKHKAKEGRGLETGE----------VHKQPSP 258
           KLAK+EF+C+MC +  TSEI+ N HLKGKKH AKEGR L+T E          +  Q   
Sbjct: 184 KLAKEEFVCSMCNVQVTSEISFNAHLKGKKHMAKEGRSLQTQEPSPAEDLKEKLDNQKKD 243

Query: 259 PEQAPPLENKGSFKFWCETCLVGTRSLVVMETHNKGKKHRARLLKLG-QCKLDEQK-EPN 308
            ++   L+NK  FKFWC+ C +GT  + +M +HN GKKH+ARLLKL  Q KLD+QK EPN
Sbjct: 244 ADKKSALKNKVHFKFWCKICEIGTPCMAIMVSHNNGKKHKARLLKLSQQSKLDDQKDEPN 303

[Close]

BLAST of Lcy03g019060 vs. NCBI nr
Match: XP_008443847.1 (PREDICTED: uncharacterized protein LOC103487343 [Cucumis melo] >KAA0035096.1 UBP1-associated proteins 1C-like isoform X3 [Cucumis melo var. makuwa] >TYJ95982.1 UBP1-associated proteins 1C-like isoform X3 [Cucumis melo var. makuwa])

HSP 1 Score: 236.5 bits (602), Expect = 3.2e-58
Identity = 153/313 (48.88%), Postives = 193/313 (61.66%), Query Frame = 0


Query: 19  RFRAIHNKPPPAASSSGSSSDHLLRDDSPNAELVKQRIKEEIMIREIASRRMLEAEIRRE 78
           RFRAI NK P  A+   S+SD  ++DDS N EL KQRIKEEI +REI  RRMLEAEIRRE
Sbjct: 4   RFRAIDNKSPATAA---STSDQPIQDDSLNEELWKQRIKEEITMREIVRRRMLEAEIRRE 63

Query: 79  LIIEQELAMHRAAGRTE-RLALDEHFAMRLLNQRLNHVVD-QPSTGLLAVPGFSSSLDSQ 138
           L++E+ELA+ RA G+TE  L+ D  F +R +N+ +N ++D   ST LLAVPG +SSL+  
Sbjct: 64  LLVERELAIRRARGQTEGLLSFDNQFLVRFMNEGVNRILDPSSSTALLAVPGSNSSLN-- 123

Query: 139 TIRSFSEPRKEEPKALEDEKDKLILLPKPDPEKFKAKRKAEGPPTEADT--------NTE 198
                    KEEPK  EDE +KLI L +PDP KF  KRKA G    A            +
Sbjct: 124 --------LKEEPKPEEDEMNKLITLERPDPGKFVGKRKAVGDQEAAAAMGGGGERDQRQ 183

Query: 199 PLIPS--ISSKKLAKKEFICTMCKITTTSEITLNTHLKGKKHKAKEGRGLETGEVHKQPS 258
            +IP+  I SKKLAK+EF+C+MC +  TSEI+ N H+ GKKHKAKEGR       HK+P+
Sbjct: 184 TIIPTPWIGSKKLAKEEFVCSMCNVKATSEISFNAHINGKKHKAKEGRRQVQQTTHKEPN 243

Query: 259 PPEQ---------------APPLENKGSFKFWCETCLVGTRSLVVMETHNKGKKHRARLL 304
             E+                P LE     KF CE C VG   + VM +HN G+KH+ARLL
Sbjct: 244 QGEEDLKEKLDHPVKNIDKNPALEKNKRLKFRCEICNVGVPWMAVMVSHNNGRKHKARLL 303

[Close]

BLAST of Lcy03g019060 vs. NCBI nr
Match: XP_022926958.1 (uncharacterized protein LOC111433915 [Cucurbita moschata])

HSP 1 Score: 154.8 bits (390), Expect = 1.2e-33
Identity = 91/118 (77.12%), Postives = 99/118 (83.90%), Query Frame = 0


Query: 19  RFRAIHNKPPPAASSSGSSSDHLLRDDSPNAELVKQRIKEEIMIREIASRRMLEAEIRRE 78
           R RA+ NKP  AASSS  SSDH LRDDSPNAELVKQRIKEEI  RE ASRRMLEAEIRRE
Sbjct: 58  RVRAVDNKPLLAASSSECSSDHPLRDDSPNAELVKQRIKEEITNRETASRRMLEAEIRRE 117

Query: 79  LIIEQELAMHRAAGRTERLALDEHFAMRLLNQRLNHVVDQPST-GLLAVPGFSSSLDS 136
           LIIEQEL++ RA GRTE LA DEHFAMR+L+ RLNH+VDQ S+ GLLAVPG  SSL+S
Sbjct: 118 LIIEQELSILRATGRTEGLAFDEHFAMRMLDLRLNHIVDQSSSRGLLAVPGSCSSLNS 175

[Close]

BLAST of Lcy03g019060 vs. NCBI nr
Match: XP_010047067.2 (uncharacterized protein LOC104436029 [Eucalyptus grandis])

HSP 1 Score: 137.9 bits (346), Expect = 1.6e-28
Identity = 104/278 (37.41%), Postives = 149/278 (53.60%), Query Frame = 0


Query: 39  DHLLRDDSPNAELVKQRIKEEIMIREIASRRMLEAEIRRELIIEQELAMHRAA-GRTERL 98
           D  L  ++   E+ KQ+I+EEI+  E+A R+MLE E+RREL++E+++ +  A  G     
Sbjct: 55  DPYLVRETIQREIEKQKIREEIIASEVARRQMLEEEVRRELMLERQMVLRSAGDGLPFEG 114

Query: 99  ALDEHFAMRLLNQRLNHVVDQPSTGLLAVPGFSSSLDSQTIRS-FSEPRKEEPKALEDEK 158
                F     +  L+ +  +     LA  G ++   S  IRS  + P + +P   E  K
Sbjct: 115 KSTMWFGFNRGHPALHRLESRAMEDHLAFFGHNAVDMSPLIRSPEATPTEIKP---ELNK 174

Query: 159 DKLILLPKPDPEKFKAKRKAEGPPTEADTNTEPLIPSISSKKLAKKEFICTMCKITTTSE 218
           D+LI+LP+PDP    AKRKA   P +AD      + + S KK  K+E+ C +C+++ TSE
Sbjct: 175 DRLIMLPRPDPNLSNAKRKASTSPVDADE-----LSTFSQKKKTKEEWTCALCQVSATSE 234

Query: 219 ITLNTHLKGKKHKAKEG--------RGLETGEVH------KQPSPPEQAPPLEN-----K 278
             L  HL+GKKHK KE          G     V+      K  S P+ A  LEN     K
Sbjct: 235 KGLKEHLEGKKHKTKEASLARKIGKEGTTESRVNQELKDSKMLSRPKMAQNLENTEGSRK 294

Query: 279 GSFKFWCETCLVGTRSLVVMETHNKGKKHRARLLKLGQ 296
            +F+FWC  C +G  S+ VME+H KGKKH ARL +LGQ
Sbjct: 295 KNFQFWCAMCQIGAFSVTVMESHQKGKKHIARLQELGQ 324

[Close]

BLAST of Lcy03g019060 vs. NCBI nr
Match: KCW78821.1 (hypothetical protein EUGRSUZ_C00251 [Eucalyptus grandis])

HSP 1 Score: 135.2 bits (339), Expect = 1.0e-27
Identity = 103/278 (37.05%), Postives = 148/278 (53.24%), Query Frame = 0


Query: 39  DHLLRDDSPNAELVKQRIKEEIMIREIASRRMLEAEIRRELIIEQELAMHRAA-GRTERL 98
           D  L  ++   E+ KQ+I+EEI+  E+A R+MLE E+RREL++E+++ + RA  G     
Sbjct: 55  DPYLVRETIQREIEKQKIREEIIASEVARRQMLEEEVRRELMLERQMVLRRAGDGLPFEG 114

Query: 99  ALDEHFAMRLLNQRLNHVVDQPSTGLLAVPGFSSSLDSQTIRS-FSEPRKEEPKALEDEK 158
                F     +  L+ +  +     LA  G ++   S  IRS  + P + +P   E  K
Sbjct: 115 KSTMWFGFNPGHPALHRLESRAMEDHLAFFGHNAVDMSPLIRSPEATPTEIKP---ELNK 174

Query: 159 DKLILLPKPDPEKFKAKRKAEGPPTEADTNTEPLIPSISSKKLAKKEFICTMCKITTTSE 218
           D+LI+LP+PDP    AKRKA     +AD      + + S KK  K+E+ C +C+++ TSE
Sbjct: 175 DRLIMLPRPDPNLSSAKRKASTSSVDADE-----LSTFSQKKKTKEEWTCALCQVSATSE 234

Query: 219 ITLNTHLKGKKHKAKEG--------RGLETGEVH------KQPSPPEQAPPLEN-----K 278
             L  HL+GKKHK KE          G     V+      K  S P+    LEN     K
Sbjct: 235 KGLKEHLEGKKHKTKEASLARKIGKEGTTESRVNQELKDSKMLSRPKMVQNLENTEGSRK 294

Query: 279 GSFKFWCETCLVGTRSLVVMETHNKGKKHRARLLKLGQ 296
            +F+FWC  C +G  S+ VME+H KGKKH ARL +LGQ
Sbjct: 295 KNFQFWCAMCQIGAFSVTVMESHQKGKKHIARLQELGQ 324

[Close]

BLAST of Lcy03g019060 vs. TAIR 10
Match: AT2G24030.1 (zinc ion binding;nucleic acid binding )

HSP 1 Score: 71.6 bits (174), Expect = 1.3e-12
Identity = 93/321 (28.97%), Postives = 144/321 (44.86%), Query Frame = 0


Query: 19  RFRAI-HNKPPPAA------------------SSSGSSSDHLLRDDSPNAELVKQRIKEE 78
           R+RAI +N+PPPA                   S  G  S+  +R ++   E+ K++I++E
Sbjct: 4   RYRAIDNNRPPPATDTTPSPSLKPNFPFLSERSMPGQQSEDQVR-EAIKREIEKEQIRQE 63

Query: 79  IMIREIASRRMLEAEIRRELIIEQELAMHRAAGRTERLALDEHFAM-----RLLNQ---R 138
           I+I E A +R L AE+ +E+ IE+E+A+ R +     ++L+E   M     +L NQ   +
Sbjct: 64  IIIAEAARKRELIAEVLQEMAIEREMAIRRVS--DTEMSLEEKLTMWINQRKLPNQNQNQ 123

Query: 139 LNHVVDQPST---GLLAVPGFSSSLDSQTIRSFSEPRKEE---PKALEDEKDKLILLPKP 198
            N+   Q  +    L+    ++S L S  ++     +  E      LE  K+ LI+L + 
Sbjct: 124 FNNFFRQKYSYIDSLINTGSYNSLLTSPMMQLPQLQQMSEATGTSMLESNKENLIVLNRA 183

Query: 199 DPEKFKAKRKAEGPPTEADTNTEPLIPSISSKKLAKKEFICTMCKITTTSE--------I 258
           D    K K  + G          P     S  +  K++FI  + +     E         
Sbjct: 184 DIIGAKPKADSVGTMQLPKLQQMPEATGTSVLESNKEQFI-VLARADPVGEKRKAEDIQT 243

Query: 259 TLNTHLKGKKHKAKEGR----GLETGEV--HKQPSPPEQAPPLENKGSF----KFWCETC 289
            LN  L+ K+ KAKE       LETGE+   K P   +     + +G      KFWCE C
Sbjct: 244 GLNEDLQVKRPKAKESEAKAMSLETGEIVSSKVPCSGKLGSGKKAEGKLRTNQKFWCEIC 303

[Close]

BLAST of Lcy03g019060 vs. TAIR 10
Match: AT5G61190.1 (putative endonuclease or glycosyl hydrolase with C2H2-type zinc finger domain )

HSP 1 Score: 54.3 bits (129), Expect = 2.1e-07
Identity = 43/143 (30.07%), Postives = 58/143 (40.56%), Query Frame = 0


Query: 194 ISSKKLAKKEFICTMCKITTTSEITLNTHLKGKKH------------------------- 253
           I S+  A  EF+C MC +   S+I  N+HL+GKKH                         
Sbjct: 358 IESRAQANAEFVCLMCNVVCQSQIVFNSHLRGKKHANMLSQSEALIVSTKLQEKGVGEKE 417

Query: 254 --------------KAKEGRGL-------ETGEVHKQPSPPEQAPPLENKGSFKFWCETC 291
                         KA+E + L       E G+  K    P++   L N  S K+ C  C
Sbjct: 418 QPSETVAELQLQSQKAQEKQVLVDSKKLPEKGDEVK--GQPKEMTALRN-ASAKYICRMC 477

[Close]

BLAST of Lcy03g019060 vs. TAIR 10
Match: AT2G24030.2 (zinc ion binding;nucleic acid binding )

HSP 1 Score: 47.4 bits (111), Expect = 2.6e-05
Identity = 67/242 (27.69%), Postives = 102/242 (42.15%), Query Frame = 0


Query: 79  LIIEQELAMHRAAGRTERLALDEHFAM-----RLLNQ---RLNHVVDQPST---GLLAVP 138
           + IE+E+A+ R +     ++L+E   M     +L NQ   + N+   Q  +    L+   
Sbjct: 1   MAIEREMAIRRVS--DTEMSLEEKLTMWINQRKLPNQNQNQFNNFFRQKYSYIDSLINTG 60

Query: 139 GFSSSLDSQTIRSFSEPRKEE---PKALEDEKDKLILLPKPDPEKFKAKRKAEGPPTEAD 198
            ++S L S  ++     +  E      LE  K+ LI+L + D    K K  + G      
Sbjct: 61  SYNSLLTSPMMQLPQLQQMSEATGTSMLESNKENLIVLNRADIIGAKPKADSVGTMQLPK 120

Query: 199 TNTEPLIPSISSKKLAKKEFICTMCKITTTSE--------ITLNTHLKGKKHKAKEGR-- 258
               P     S  +  K++FI  + +     E          LN  L+ K+ KAKE    
Sbjct: 121 LQQMPEATGTSVLESNKEQFI-VLARADPVGEKRKAEDIQTGLNEDLQVKRPKAKESEAK 180

Query: 259 --GLETGEV--HKQPSPPEQAPPLENKGSF----KFWCETCLVGTRSLVVMETHNKGKKH 289
              LETGE+   K P   +     + +G      KFWCE C VGT   +VM  H  GKKH
Sbjct: 181 AMSLETGEIVSSKVPCSGKLGSGKKAEGKLRTNQKFWCEICKVGTYCQIVMRDHELGKKH 239

The following BLAST results are available for this feature:

BLAST of Lcy03g019060 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8VD12	1.6e-04	27.45	Zinc finger protein 385A OS=Mus musculus OX=10090 GN=Znf385a PE=1 SV=2	[more]

BLAST of Lcy03g019060 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3B800	1.6e-58	48.88	UBP1-associated proteins 1C-like isoform X3 OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A1S3B9S7	1.6e-58	48.88	uncharacterized protein LOC103487343 OS=Cucumis melo OX=3656 GN=LOC103487343 PE=...	[more]
A0A6J1EJN4	6.0e-34	77.12	uncharacterized protein LOC111433915 OS=Cucurbita moschata OX=3662 GN=LOC1114339...	[more]
A0A059CKW4	4.9e-28	37.05	Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_C00251 PE=4 SV...	[more]
A0A6J1HN47	3.2e-27	69.83	uncharacterized protein LOC111465139 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]

BLAST of Lcy03g019060 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038880353.1	6.1e-73	55.96	zinc finger protein 385B [Benincasa hispida]	[more]
XP_008443847.1	3.2e-58	48.88	PREDICTED: uncharacterized protein LOC103487343 [Cucumis melo] >KAA0035096.1 UBP...	[more]
XP_022926958.1	1.2e-33	77.12	uncharacterized protein LOC111433915 [Cucurbita moschata]	[more]
XP_010047067.2	1.6e-28	37.41	uncharacterized protein LOC104436029 [Eucalyptus grandis]	[more]
KCW78821.1	1.0e-27	37.05	hypothetical protein EUGRSUZ_C00251 [Eucalyptus grandis]	[more]

BLAST of Lcy03g019060 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G24030.1	1.3e-12	28.97	zinc ion binding;nucleic acid binding	[more]
AT5G61190.1	2.1e-07	30.07	putative endonuclease or glycosyl hydrolase with C2H2-type zinc finger domain	[more]
AT2G24030.2	2.6e-05	27.69	zinc ion binding;nucleic acid binding	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003604	Matrin/U1-C-like, C2H2-type zinc finger	SMART	SM00451	ZnF_U1_5	coord: 201..235 e-value: 5.5E-4 score: 29.2 coord: 259..293 e-value: 0.056 score: 22.2
IPR013087	Zinc finger C2H2-type	SMART	SM00355	c2h2final6	coord: 262..286 e-value: 120.0 score: 3.7 coord: 204..228 e-value: 0.071 score: 22.2
None	No IPR available	GENE3D	3.30.160.60	Classic Zinc Finger	coord: 241..292 e-value: 2.7E-7 score: 32.0 coord: 182..233 e-value: 1.1E-10 score: 42.9
None	No IPR available	PFAM	PF12874	zf-met	coord: 262..286 e-value: 4.4E-5 score: 23.7 coord: 204..228 e-value: 2.6E-8 score: 34.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 140..181
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 135..190
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 24..46
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 224..255
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 303..325
None	No IPR available	PANTHER	PTHR47487	OS06G0651300 PROTEIN-RELATED	coord: 19..306
None	No IPR available	PANTHER	PTHR47487:SF8	OS06G0651300 PROTEIN	coord: 19..306
IPR036236	Zinc finger C2H2 superfamily	SUPERFAMILY	57667	beta-beta-alpha zinc fingers	coord: 252..290
IPR036236	Zinc finger C2H2 superfamily	SUPERFAMILY	57667	beta-beta-alpha zinc fingers	coord: 193..232

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy03g019060.1	Lcy03g019060.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding