Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GACGACCCTCATCCGCTCGCCACTTCAACTGGTTCGAGCGCCCACTCCCGCTGCTCACACTGACAACCAACAAACTCCTTCTCCACTTCCATCCATGTCTGCGCTTCCTTCTACGGCCGCTCTTCACGTTCTCCCTCAGCTTCCATTGCTAAAACCTGAAGCTCCTCTTCTCTACGGCTGTTCTTGTGCTTCTGCTTCTGCTGCAACCACTTCTTCCGCCTGTTCCACTTCCGCCGCCGCAATACAGCCAATCGCCCCGGTTATCCATCCCGTTTTGCTCTTCAATAGCTTCGACGCGCCATTGGACACCCAAACTTTTCTCGCTACTTTCAGTGTTTTGGTTGCCATTTCTCTGTCCCTCTTTCTTGGCCTTAAGGTATCGCTTCTTTGGCCATTTCTCCTCTGACGGTTATCTTGTGAAGTAATTGTTTGAAATGTGGTGAGGATTGTGATTTAAGGATTAAATTTGTTGGTTCCGGTTTTGCAGGGTGGTCCTGTGCCTTGTGAGCGCTGTGCTGGAAATGGTAACTATAATTTGTTTCAGAGTTGCATTTTAGATTCTGAAAATTTCAATTTAATGCATTAAGGTTCTGTCTATGATTGCAGCTTCACAGTTGTATTTCATTACCAACATTAACTTAGCCATGAATTGTGATGTAGCAATTGTAAGGGCTTCAATATGAACCTATTAGTTATTACTACATTATTGTTTTGGTCATCTATTAGTCCTAGCATTGGCTTTACTTACTGATTGAATGGTTTTACAACAAATGAAGTCCTTGCTTTGAAGTGCTTGATGAACATTCTAGTTTTGGATGCATCAAATAGTTAAGGCCCGTTTGATAACCATTTGGTTTTTGAAAATTAAGCTTATAAACACTACTCCCACCTATAAGTTTGTTTTTTTAATACCTTTTTCCCATGTTTTCAAAAACCAAGCCAATTTTTGAAAACTAAAAAAAGTAGTTCTCAAAGACTTGTTTTTGTTTTTGGAATTTGGCTCAAATGTGTCCTTGACAAGGATAAAAACCATGGTAAGGAAATTTGGAGTTATATATTTTGGCCTTAATTTAGAGGGAGCAATTTTATTATTATATTCATAGTCTTGAACATGTGAAGCGGTTGATAACTGCCCTTTGAACCAATCTATACTCGGTATTTGGCTTCCCAAGTTTTTTGTTTAGTTGTTTATAAGTTAACCCTAGACCAGCAAATGGAGTATGGGAGAGAGGAAATTCCTTGTCCTTTACATATATAAGATTTTGTGAATATTTCATCTTGCAACTTCATTAAGGATTTGTTGCGTTCTGATTATGGCACCTATACATAAATCCCACATTTAGGGGTTAAGAAGCCTTACTCAAAAGAGCAAAAGGGGTGTACTTTTGCTTCATTTTGGGAAGGAGATTACAGCAAAAACTTTTAGCCTTTGCAGGAATGTAGTGTCACTAACAAACTTGCAGAATGTTCCAATGGATTGGTAGATAGGAAGTGCCAATATTTTTCCCTTTTACTTGTTTTGGTTGTTCCCGAGTATCACAAACGAAATGGTTGGAACTTCCTGGGGGATGAATGTTAGATAGAACTTGCAACAATCTCAACAAAATATGAACAGTTCCTCAATGTTGATGGAAACTGACAAATTTTACTGAGATCCTAAACTACAATGCATTTTCACATCTCAACATTTATATCATATTTTCAATGGTGACCTATGAATTAGCAACATTTGAAGGAGCTAGAATTTACGGATCATATCGAACATAAAATTAAATTAACTATTAACTACTACTTGATATAGTTGGTAAGCTGTGGAGGCTAATTTTCCATGAATGCTTGTCTCGAAGATTTCTTAAACATCTCAATAATTTGGGTAACCATGTCAATGTGCAGGTGGCACAAAATGTGTCTTCTGTGACAATGGTAAGATGCAGCAACCGTCAGGATTAATTGACTGCAAAGTGTGTAAGGGTGCAGGTACTTTTCCTATACTTTCAAAATTACATGAAGCTTTCTTTGTCATAGTTCGTAGATCAAAATCTCTTCGACAACTGATGACCAGCCTGTGTCCTTAACATGTTGCATGTTGGGAAAAAAAATTATGCATTTGTGTGTATATATATATTTGCATATAATTTATTGCCAATGACCACTTTTTGAGAGATATATCAAAATTAGCCTATTTTTAGTTTTTATTGCCAAAATGGCTAGATCAAGCTGTCCATCTTTTCTATAGAAGAAACTTCCCCTTATCAATTTGAAATTGAAGTTTAAAGAAATGCCATTAGTTGGCTGCCAATTTTGTTATAAGTTCCATCATTCTTGGCTAGGTGCAAGTATTTTTAATATTTATTAAATTTGAATCTCAAATTGACTATATTGTCTTTTAATCTCTTGCTTTGAAGGCAACTTCCTTTCTTATTAATTTCTTCGCTAGTTATTTTTCCCTTGTAGCAATTTAAATCCAATATCAGTAAGTTCTCTGTTTTTTTTTTCTTTTTCGTTCTCCAAATACTCTACTTATATTGATTTCGTAAAAAATAAGATTTTTTTTTTCTATCTTGTATGTTTAAGATTTTAGCTATTTACTTGTTATCTTGAGTGATCATTGTTTTTTAATGATATTTTATCTAATTTAAGTTTTAAATTTCTTTGCAGGATTGATATTCTGCAAAAAATGTGGTGGTTCTGGATATTCCAGACGACTTTGAACCTTTGAGCGATAAGTTTTCCCCTCTAGCAATGTAATTTCTGACATTGTGTTTCAACTCACTCAGGGTAATGATTCGATTATTTAAAATCATTGAGTCCTTAGTAGTTTCTTCTTCATTAGAGGGGTGCAATTGTTTCACTTTCTTACGAGGGTTGGCTTTCTTGTATGTGTATATTTTTTAAAAGAAGTCTTTTTTTTCAACAAACATAAATTCATTGAAAACAAATTTAAAAATGGAATCAATCATGAATCAATAAGGCACAATCATCTTCACCTGCACATATACAGAAAATTGTGGCAACAGTTAAATGAAAACTTAACTGTGAAATAGATTTCCCTCCCCTAACAATAGTTTTGCCTCCATAACCAAAGACCGAATGCTTCTTAACTCTTCTTCCATTTTTTCTGATAAAAAGCACGAGTTACGCCTGCTATCCTCTAATAATTGGGTTGTCTTTTGGACAACTACAGATTTTGCAGTTAACAATTCCTCCATCCTTCTGTGCTCCATCTGCAATTTTTCTTCCAAAATTCTTATCTCTGCTTCCTTCAGACCTGCTTCAAATAGGCACTCTTGGTACTCCAAAATAATGTTCTCAAATTCTGTTATTCCGGCATCCCTCATTTCCAACAGTGTCTCCTTATCATTGACTACCGCCTGAACTGCGGCTTCTATCTCGTCAACAGACCTTGAAGCTTTCTGTACCTCCAAATGAACAGCTTCGATATCACTTTCAACCTTTCTAGACTTCCTTGTCAAATCTTCAAGTTCCTTTCCTCTGACCCCAAGTTTTTCTTTAGCTAGCTTCATCTCATTCTGCAATTTAGTTTTCTCTTCTGCAGACTTGAGTAAATCTGTGGCTCGACCAGCAAACTGCCAGTTCTTTGGTTGGGAATCCGTTTTCTCGACATTATCTATTGCAAATAGGACCTTGTCATTTTCTTGTTTTTGACTTTCTTCATCTAATTTAGATTTTAAGGTTGCAAGGTTGCTCCTCAGTTCCACTTCAGATTGTTGAATCTTTACACATCGAATCTCGATTTCTTCTTTGCGTGCCTGGAGGAAGGCCAATTCGTTTTTCCTCTGGTCCAAATAAGAATTTGAAGCATCCGCCCTTGCTCTTGCCCTTGTTTCTCGTTGTTCAAAATACAATATTGAAGAAGAAAAGTTAGTTAGAGAGTATTTCAGAGCGGAAAACTTACTCTGTGCAAGATCTCTACTTTCTTGCTTTTTTGATAATACGAGTCTAAGGGATTCCACCTCCTTCTGCTTTAACTGAACTTCATCTTCCACAACTTCAACCTGTTTGGAGAGTTTATCAGCCTCAAATACCATCTTCTCAAGTGAACTTAAAACAGTGACAGTTCTGGTTGAATCTGAAAGCTGTTCATCTGCTCTTTCGAGCTTCTTTCTGATCATACTTAAATCTTCTGGTAACATTTCTACAACATGAGCTGGTGTTTCAATTTCCATTTGAGTTCCAACATGAATCTGTCTTGCATTGTCCAAATCAGACCTACCTTTCTCTTCAACGAATTCGTCTGCTTCATCCATCTCGCTCCCTCCCTTTACATCAAAGTTTGCTTGGGAACATAATTCACCTGCAACAAGAACATCATTTTCTTCTTCAATAGAATTTCCAAGGCTTGGGATGGACTCGTTGAACTCTCCCCCTCTGTCGAGCATTTCCATCTCAGGTGGTACAGATTGACAGACCAAATTCTGTGCTTCATTGGGGTTGAGAGGTTCAACATATGCCTTGTTCATCCCTTCATCAACTTCAACAAACTTCTCAATGCAATCAGATTCTCCTCTGGCGTCAACTTTTGTGCGTTCTAAAGAAGAAAGCATCTTTTTGAGCTCATCTTTCTCTTGCATGGCTCCTTCATACAAACTCATTAACTTGTCATTTTCCTCGTGCATTTCCACTAGCTGTTGTTGCAGCCTCTCAACCGCTTTCTCATGAGCCTCTTTTTCATTGGAAGTTTCGACCACTTTAGTTTCATTCTGTGCAGTTTCTACTTTATTTTCATTTCCGAACTTGCATTCCATAGTTGCTGTTTCATACAGTTCGATGAGTTTATTGTTATCCTCTATTAAAACTCTCAGCTTCATTCGCAGTTCATCATTCTCTTTAGACAAGGCTATTGCCGTTTCATGAGCACTTGCTTCTCTTTGGCTAGCGGCACCAATGACATCAACCATTGTCTTTAACTCCATTTGGTGGCTAAAATTGATGGTGGGCATGTCATTTGATGCCAAAGGAAGCTCAACTTGATTAGTTCCATCCACAGGTCCAGTATACCCCTTAGACTCGAGTTTTGCTACCAATTCATCAACACGCCTGCATAATCAGATGTTTTAATTGCTAGCATAAAAGTTCAATTTATGAACCAACATAAAGAAAAAAGAAACAACGCAAAAGCCACAAAATAACACCATCTCACTAACTCAATTTCATTTTATCAGTTAAACCGACCACCATAGCTGCTCTATTACCTTTCCAACTTTTCCTTTTCTT
mRNA sequence
GACGACCCTCATCCGCTCGCCACTTCAACTGGTTCGAGCGCCCACTCCCGCTGCTCACACTGACAACCAACAAACTCCTTCTCCACTTCCATCCATGTCTGCGCTTCCTTCTACGGCCGCTCTTCACGTTCTCCCTCAGCTTCCATTGCTAAAACCTGAAGCTCCTCTTCTCTACGGCTGTTCTTGTGCTTCTGCTTCTGCTGCAACCACTTCTTCCGCCTGTTCCACTTCCGCCGCCGCAATACAGCCAATCGCCCCGGTTATCCATCCCGTTTTGCTCTTCAATAGCTTCGACGCGCCATTGGACACCCAAACTTTTCTCGCTACTTTCAGTGTTTTGGTTGCCATTTCTCTGTCCCTCTTTCTTGGCCTTAAGGGTGGTCCTGTGCCTTGTGAGCGCTGTGCTGGAAATGGTGGCACAAAATGTGTCTTCTGTGACAATGGTAAGATGCAGCAACCGTCAGGATTAATTGACTGCAAAGTGTGTAAGGGTGCAGGATTGATATTCTGCAAAAAATGTGGTGGTTCTGGATATTCCAGACGACTTTGAACCTTTGAGCGATAAGTTTTCCCCTCTAGCAATGTAATTTCTGACATTGTGTTTCAACTCACTCAGGGTAATGATTCGATTATTTAAAATCATTGAGTCCTTAGTAGTTTCTTCTTCATTAGAGGGGTGCAATTGTTTCACTTTCTTACGAGGGTTGGCTTTCTTGTATGTGTATATTTTTTAAAAGAAGTCTTTTTTTTCAACAAACATAAATTCATTGAAAACAAATTTAAAAATGGAATCAATCATGAATCAATAAGGCACAATCATCTTCACCTGCACATATACAGAAAATTGTGGCAACAGTTAAATGAAAACTTAACTGTGAAATAGATTTCCCTCCCCTAACAATAGTTTTGCCTCCATAACCAAAGACCGAATGCTTCTTAACTCTTCTTCCATTTTTTCTGATAAAAAGCACGAGTTACGCCTGCTATCCTCTAATAATTGGGTTGTCTTTTGGACAACTACAGATTTTGCAGTTAACAATTCCTCCATCCTTCTGTGCTCCATCTGCAATTTTTCTTCCAAAATTCTTATCTCTGCTTCCTTCAGACCTGCTTCAAATAGGCACTCTTGGTACTCCAAAATAATGTTCTCAAATTCTGTTATTCCGGCATCCCTCATTTCCAACAGTGTCTCCTTATCATTGACTACCGCCTGAACTGCGGCTTCTATCTCGTCAACAGACCTTGAAGCTTTCTGTACCTCCAAATGAACAGCTTCGATATCACTTTCAACCTTTCTAGACTTCCTTGTCAAATCTTCAAGTTCCTTTCCTCTGACCCCAAGTTTTTCTTTAGCTAGCTTCATCTCATTCTGCAATTTAGTTTTCTCTTCTGCAGACTTGAGTAAATCTGTGGCTCGACCAGCAAACTGCCAGTTCTTTGGTTGGGAATCCGTTTTCTCGACATTATCTATTGCAAATAGGACCTTGTCATTTTCTTGTTTTTGACTTTCTTCATCTAATTTAGATTTTAAGGTTGCAAGGTTGCTCCTCAGTTCCACTTCAGATTGTTGAATCTTTACACATCGAATCTCGATTTCTTCTTTGCGTGCCTGGAGGAAGGCCAATTCGTTTTTCCTCTGGTCCAAATAAGAATTTGAAGCATCCGCCCTTGCTCTTGCCCTTGTTTCTCGTTGTTCAAAATACAATATTGAAGAAGAAAAGTTAGTTAGAGAGTATTTCAGAGCGGAAAACTTACTCTGTGCAAGATCTCTACTTTCTTGCTTTTTTGATAATACGAGTCTAAGGGATTCCACCTCCTTCTGCTTTAACTGAACTTCATCTTCCACAACTTCAACCTGTTTGGAGAGTTTATCAGCCTCAAATACCATCTTCTCAAGTGAACTTAAAACAGTGACAGTTCTGGTTGAATCTGAAAGCTGTTCATCTGCTCTTTCGAGCTTCTTTCTGATCATACTTAAATCTTCTGGTAACATTTCTACAACATGAGCTGGTGTTTCAATTTCCATTTGAGTTCCAACATGAATCTGTCTTGCATTGTCCAAATCAGACCTACCTTTCTCTTCAACGAATTCGTCTGCTTCATCCATCTCGCTCCCTCCCTTTACATCAAAGTTTGCTTGGGAACATAATTCACCTGCAACAAGAACATCATTTTCTTCTTCAATAGAATTTCCAAGGCTTGGGATGGACTCGTTGAACTCTCCCCCTCTGTCGAGCATTTCCATCTCAGGTGGTACAGATTGACAGACCAAATTCTGTGCTTCATTGGGGTTGAGAGGTTCAACATATGCCTTGTTCATCCCTTCATCAACTTCAACAAACTTCTCAATGCAATCAGATTCTCCTCTGGCGTCAACTTTTGTGCGTTCTAAAGAAGAAAGCATCTTTTTGAGCTCATCTTTCTCTTGCATGGCTCCTTCATACAAACTCATTAACTTGTCATTTTCCTCGTGCATTTCCACTAGCTGTTGTTGCAGCCTCTCAACCGCTTTCTCATGAGCCTCTTTTTCATTGGAAGTTTCGACCACTTTAGTTTCATTCTGTGCAGTTTCTACTTTATTTTCATTTCCGAACTTGCATTCCATAGTTGCTGTTTCATACAGTTCGATGAGTTTATTGTTATCCTCTATTAAAACTCTCAGCTTCATTCGCAGTTCATCATTCTCTTTAGACAAGGCTATTGCCGTTTCATGAGCACTTGCTTCTCTTTGGCTAGCGGCACCAATGACATCAACCATTGTCTTTAACTCCATTTGGTGGCTAAAATTGATGGTGGGCATGTCATTTGATGCCAAAGGAAGCTCAACTTGATTAGTTCCATCCACAGGTCCAGTATACCCCTTAGACTCGAGTTTTGCTACCAATTCATCAACACGCCTGCATAATCAGATGTTTTAATTGCTAGCATAAAAGTTCAATTTATGAACCAACATAAAGAAAAAAGAAACAACGCAAAAGCCACAAAATAACACCATCTCACTAACTCAATTTCATTTTATCAGTTAAACCGACCACCATAGCTGCTCTATTACCTTTCCAACTTTTCCTTTTCTT
Coding sequence (CDS)
ATGTCTGCGCTTCCTTCTACGGCCGCTCTTCACGTTCTCCCTCAGCTTCCATTGCTAAAACCTGAAGCTCCTCTTCTCTACGGCTGTTCTTGTGCTTCTGCTTCTGCTGCAACCACTTCTTCCGCCTGTTCCACTTCCGCCGCCGCAATACAGCCAATCGCCCCGGTTATCCATCCCGTTTTGCTCTTCAATAGCTTCGACGCGCCATTGGACACCCAAACTTTTCTCGCTACTTTCAGTGTTTTGGTTGCCATTTCTCTGTCCCTCTTTCTTGGCCTTAAGGGTGGTCCTGTGCCTTGTGAGCGCTGTGCTGGAAATGGTGGCACAAAATGTGTCTTCTGTGACAATGGTAAGATGCAGCAACCGTCAGGATTAATTGACTGCAAAGTGTGTAAGGGTGCAGGATTGATATTCTGCAAAAAATGTGGTGGTTCTGGATATTCCAGACGACTTTGA
Protein sequence
MSALPSTAALHVLPQLPLLKPEAPLLYGCSCASASAATTSSACSTSAAAIQPIAPVIHPVLLFNSFDAPLDTQTFLATFSVLVAISLSLFLGLKGGPVPCERCAGNGGTKCVFCDNGKMQQPSGLIDCKVCKGAGLIFCKKCGGSGYSRRL
Homology
BLAST of Lcy03g017360 vs. ExPASy Swiss-Prot
Match:
A0A2K3DZC4 (Protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic OS=Chlamydomonas reinhardtii OX=3055 GN=BSD2 PE=1 SV=1)
HSP 1 Score: 63.5 bits (153), Expect = 2.3e-09
Identity = 35/107 (32.71%), Postives = 49/107 (45.79%), Query Frame = 0
Query: 68 APLDTQTFLATFSVLVAISLSLFLGLKGGPVPCERCAGNGGTKCVFCDNG---------- 127
AP Q + +V+ A+S++L+ GLK PVPC C G GG +C C
Sbjct: 46 APETLQDIIVGGAVVGAVSVALYAGLKKDPVPCSLCQGTGGIRCFACGGDGRNATVSRDD 105
Query: 128 -------------KMQQPSGLI----DCKVCKGAGLIFCKKCGGSGY 148
+ P G DCKVC+GAGL+ C +C G+G+
Sbjct: 106 LYDSKALGGGVAPPKRDPLGRTINPRDCKVCRGAGLVLCSQCKGTGF 152
BLAST of Lcy03g017360 vs. ExPASy TrEMBL
Match:
A0A6J1BZ42 (uncharacterized protein LOC111007052 OS=Momordica charantia OX=3673 GN=LOC111007052 PE=4 SV=1)
HSP 1 Score: 271.6 bits (693), Expect = 2.0e-69
Identity = 140/152 (92.11%), Postives = 144/152 (94.74%), Query Frame = 0
Query: 1 MSALPSTAALHVLPQLPLLKPEAPLLYGCSCASASAATT-SSACSTSAAAIQPIAPVIHP 60
MSALPSTAALH+LPQLPLLK E PLLY S ASASAATT SSACSTSAAAI PIAPVIHP
Sbjct: 1 MSALPSTAALHLLPQLPLLKLELPLLYSSSSASASAATTASSACSTSAAAIHPIAPVIHP 60
Query: 61 VLLFNSFDAPLDTQTFLATFSVLVAISLSLFLGLKGGPVPCERCAGNGGTKCVFCDNGKM 120
+LLFN+FDAPLDTQTFLATFSVLVAISLSLFLGLKGGP+PCERCAGNGGTKCVFCDNGKM
Sbjct: 61 ILLFNTFDAPLDTQTFLATFSVLVAISLSLFLGLKGGPMPCERCAGNGGTKCVFCDNGKM 120
Query: 121 QQPSGLIDCKVCKGAGLIFCKKCGGSGYSRRL 152
QQ SGLIDCKVCKGAGLIFCKKCGGSGYSRRL
Sbjct: 121 QQQSGLIDCKVCKGAGLIFCKKCGGSGYSRRL 152
BLAST of Lcy03g017360 vs. ExPASy TrEMBL
Match:
A0A5A7UVF5 (Protein disulfide-isomerase LQY1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G004730 PE=4 SV=1)
HSP 1 Score: 266.2 bits (679), Expect = 8.6e-68
Identity = 135/151 (89.40%), Postives = 141/151 (93.38%), Query Frame = 0
Query: 1 MSALPSTAALHVLPQLPLLKPEAPLLYGCSCASASAATTSSACSTSAAAIQPIAPVIHPV 60
M+ALPSTAALHVLP LPLLKPE PLLY CSC +SAATTSS STSAAAI PI P+IHP+
Sbjct: 1 MAALPSTAALHVLPHLPLLKPEVPLLYCCSC--SSAATTSSTVSTSAAAIHPINPLIHPL 60
Query: 61 LLFNSFDAPLDTQTFLATFSVLVAISLSLFLGLKGGPVPCERCAGNGGTKCVFCDNGKMQ 120
LLF+SFDAP+DTQTFLATFSVLVAISLSLFLGLKGGPVPCERCAGNGGTKCVFCDNGKMQ
Sbjct: 61 LLFDSFDAPIDTQTFLATFSVLVAISLSLFLGLKGGPVPCERCAGNGGTKCVFCDNGKMQ 120
Query: 121 QPSGLIDCKVCKGAGLIFCKKCGGSGYSRRL 152
Q SGLIDCKVCKGAGLIFCKKCGGSGYSRRL
Sbjct: 121 QQSGLIDCKVCKGAGLIFCKKCGGSGYSRRL 149
BLAST of Lcy03g017360 vs. ExPASy TrEMBL
Match:
A0A1S3BXK6 (uncharacterized protein LOC103494197 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103494197 PE=4 SV=1)
HSP 1 Score: 266.2 bits (679), Expect = 8.6e-68
Identity = 135/151 (89.40%), Postives = 141/151 (93.38%), Query Frame = 0
Query: 1 MSALPSTAALHVLPQLPLLKPEAPLLYGCSCASASAATTSSACSTSAAAIQPIAPVIHPV 60
M+ALPSTAALHVLP LPLLKPE PLLY CSC +SAATTSS STSAAAI PI P+IHP+
Sbjct: 1 MAALPSTAALHVLPHLPLLKPEVPLLYCCSC--SSAATTSSTVSTSAAAIHPINPLIHPL 60
Query: 61 LLFNSFDAPLDTQTFLATFSVLVAISLSLFLGLKGGPVPCERCAGNGGTKCVFCDNGKMQ 120
LLF+SFDAP+DTQTFLATFSVLVAISLSLFLGLKGGPVPCERCAGNGGTKCVFCDNGKMQ
Sbjct: 61 LLFDSFDAPIDTQTFLATFSVLVAISLSLFLGLKGGPVPCERCAGNGGTKCVFCDNGKMQ 120
Query: 121 QPSGLIDCKVCKGAGLIFCKKCGGSGYSRRL 152
Q SGLIDCKVCKGAGLIFCKKCGGSGYSRRL
Sbjct: 121 QQSGLIDCKVCKGAGLIFCKKCGGSGYSRRL 149
BLAST of Lcy03g017360 vs. ExPASy TrEMBL
Match:
A0A5D3DYE8 (Protein disulfide-isomerase LQY1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold629G001540 PE=4 SV=1)
HSP 1 Score: 261.5 bits (667), Expect = 2.1e-66
Identity = 134/151 (88.74%), Postives = 140/151 (92.72%), Query Frame = 0
Query: 1 MSALPSTAALHVLPQLPLLKPEAPLLYGCSCASASAATTSSACSTSAAAIQPIAPVIHPV 60
M+ALPSTAALHVLP LPLLKPE PLLY SC +SAATTSS STSAAAI PI P+IHP+
Sbjct: 1 MAALPSTAALHVLPHLPLLKPEVPLLYCRSC--SSAATTSSTVSTSAAAIHPINPLIHPL 60
Query: 61 LLFNSFDAPLDTQTFLATFSVLVAISLSLFLGLKGGPVPCERCAGNGGTKCVFCDNGKMQ 120
LLF+SFDAP+DTQTFLATFSVLVAISLSLFLGLKGGPVPCERCAGNGGTKCVFCDNGKMQ
Sbjct: 61 LLFDSFDAPIDTQTFLATFSVLVAISLSLFLGLKGGPVPCERCAGNGGTKCVFCDNGKMQ 120
Query: 121 QPSGLIDCKVCKGAGLIFCKKCGGSGYSRRL 152
Q SGLIDCKVCKGAGLIFCKKCGGSGYSRRL
Sbjct: 121 QQSGLIDCKVCKGAGLIFCKKCGGSGYSRRL 149
BLAST of Lcy03g017360 vs. ExPASy TrEMBL
Match:
A0A0A0LQ07 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G025260 PE=4 SV=1)
HSP 1 Score: 260.4 bits (664), Expect = 4.7e-66
Identity = 132/151 (87.42%), Postives = 140/151 (92.72%), Query Frame = 0
Query: 1 MSALPSTAALHVLPQLPLLKPEAPLLYGCSCASASAATTSSACSTSAAAIQPIAPVIHPV 60
M+ALPSTAALHVLP LPLLKPE PLL+ CSC +SAATTSS STSAAAI PI P+IHP+
Sbjct: 1 MAALPSTAALHVLPHLPLLKPEVPLLFCCSC--SSAATTSSTVSTSAAAIHPIDPLIHPL 60
Query: 61 LLFNSFDAPLDTQTFLATFSVLVAISLSLFLGLKGGPVPCERCAGNGGTKCVFCDNGKMQ 120
LLF+SFDAP+DTQTFLAT SVLVAISLSLFLGLKGGPVPCERCAGNGGTKCVFCD+GKMQ
Sbjct: 61 LLFDSFDAPIDTQTFLATLSVLVAISLSLFLGLKGGPVPCERCAGNGGTKCVFCDSGKMQ 120
Query: 121 QPSGLIDCKVCKGAGLIFCKKCGGSGYSRRL 152
Q SGLIDCKVCKGAGLIFCKKCGGSGYSRRL
Sbjct: 121 QQSGLIDCKVCKGAGLIFCKKCGGSGYSRRL 149
BLAST of Lcy03g017360 vs. NCBI nr
Match:
XP_022134916.1 (uncharacterized protein LOC111007052 [Momordica charantia])
HSP 1 Score: 271.6 bits (693), Expect = 4.2e-69
Identity = 140/152 (92.11%), Postives = 144/152 (94.74%), Query Frame = 0
Query: 1 MSALPSTAALHVLPQLPLLKPEAPLLYGCSCASASAATT-SSACSTSAAAIQPIAPVIHP 60
MSALPSTAALH+LPQLPLLK E PLLY S ASASAATT SSACSTSAAAI PIAPVIHP
Sbjct: 1 MSALPSTAALHLLPQLPLLKLELPLLYSSSSASASAATTASSACSTSAAAIHPIAPVIHP 60
Query: 61 VLLFNSFDAPLDTQTFLATFSVLVAISLSLFLGLKGGPVPCERCAGNGGTKCVFCDNGKM 120
+LLFN+FDAPLDTQTFLATFSVLVAISLSLFLGLKGGP+PCERCAGNGGTKCVFCDNGKM
Sbjct: 61 ILLFNTFDAPLDTQTFLATFSVLVAISLSLFLGLKGGPMPCERCAGNGGTKCVFCDNGKM 120
Query: 121 QQPSGLIDCKVCKGAGLIFCKKCGGSGYSRRL 152
QQ SGLIDCKVCKGAGLIFCKKCGGSGYSRRL
Sbjct: 121 QQQSGLIDCKVCKGAGLIFCKKCGGSGYSRRL 152
BLAST of Lcy03g017360 vs. NCBI nr
Match:
XP_008453507.1 (PREDICTED: uncharacterized protein LOC103494197 isoform X1 [Cucumis melo] >KAA0058156.1 protein disulfide-isomerase LQY1 [Cucumis melo var. makuwa])
HSP 1 Score: 266.2 bits (679), Expect = 1.8e-67
Identity = 135/151 (89.40%), Postives = 141/151 (93.38%), Query Frame = 0
Query: 1 MSALPSTAALHVLPQLPLLKPEAPLLYGCSCASASAATTSSACSTSAAAIQPIAPVIHPV 60
M+ALPSTAALHVLP LPLLKPE PLLY CSC +SAATTSS STSAAAI PI P+IHP+
Sbjct: 1 MAALPSTAALHVLPHLPLLKPEVPLLYCCSC--SSAATTSSTVSTSAAAIHPINPLIHPL 60
Query: 61 LLFNSFDAPLDTQTFLATFSVLVAISLSLFLGLKGGPVPCERCAGNGGTKCVFCDNGKMQ 120
LLF+SFDAP+DTQTFLATFSVLVAISLSLFLGLKGGPVPCERCAGNGGTKCVFCDNGKMQ
Sbjct: 61 LLFDSFDAPIDTQTFLATFSVLVAISLSLFLGLKGGPVPCERCAGNGGTKCVFCDNGKMQ 120
Query: 121 QPSGLIDCKVCKGAGLIFCKKCGGSGYSRRL 152
Q SGLIDCKVCKGAGLIFCKKCGGSGYSRRL
Sbjct: 121 QQSGLIDCKVCKGAGLIFCKKCGGSGYSRRL 149
BLAST of Lcy03g017360 vs. NCBI nr
Match:
TYK28514.1 (protein disulfide-isomerase LQY1 [Cucumis melo var. makuwa])
HSP 1 Score: 261.5 bits (667), Expect = 4.4e-66
Identity = 134/151 (88.74%), Postives = 140/151 (92.72%), Query Frame = 0
Query: 1 MSALPSTAALHVLPQLPLLKPEAPLLYGCSCASASAATTSSACSTSAAAIQPIAPVIHPV 60
M+ALPSTAALHVLP LPLLKPE PLLY SC +SAATTSS STSAAAI PI P+IHP+
Sbjct: 1 MAALPSTAALHVLPHLPLLKPEVPLLYCRSC--SSAATTSSTVSTSAAAIHPINPLIHPL 60
Query: 61 LLFNSFDAPLDTQTFLATFSVLVAISLSLFLGLKGGPVPCERCAGNGGTKCVFCDNGKMQ 120
LLF+SFDAP+DTQTFLATFSVLVAISLSLFLGLKGGPVPCERCAGNGGTKCVFCDNGKMQ
Sbjct: 61 LLFDSFDAPIDTQTFLATFSVLVAISLSLFLGLKGGPVPCERCAGNGGTKCVFCDNGKMQ 120
Query: 121 QPSGLIDCKVCKGAGLIFCKKCGGSGYSRRL 152
Q SGLIDCKVCKGAGLIFCKKCGGSGYSRRL
Sbjct: 121 QQSGLIDCKVCKGAGLIFCKKCGGSGYSRRL 149
BLAST of Lcy03g017360 vs. NCBI nr
Match:
XP_004137357.1 (protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic [Cucumis sativus] >KGN63893.1 hypothetical protein Csa_013817 [Cucumis sativus])
HSP 1 Score: 260.4 bits (664), Expect = 9.7e-66
Identity = 132/151 (87.42%), Postives = 140/151 (92.72%), Query Frame = 0
Query: 1 MSALPSTAALHVLPQLPLLKPEAPLLYGCSCASASAATTSSACSTSAAAIQPIAPVIHPV 60
M+ALPSTAALHVLP LPLLKPE PLL+ CSC +SAATTSS STSAAAI PI P+IHP+
Sbjct: 1 MAALPSTAALHVLPHLPLLKPEVPLLFCCSC--SSAATTSSTVSTSAAAIHPIDPLIHPL 60
Query: 61 LLFNSFDAPLDTQTFLATFSVLVAISLSLFLGLKGGPVPCERCAGNGGTKCVFCDNGKMQ 120
LLF+SFDAP+DTQTFLAT SVLVAISLSLFLGLKGGPVPCERCAGNGGTKCVFCD+GKMQ
Sbjct: 61 LLFDSFDAPIDTQTFLATLSVLVAISLSLFLGLKGGPVPCERCAGNGGTKCVFCDSGKMQ 120
Query: 121 QPSGLIDCKVCKGAGLIFCKKCGGSGYSRRL 152
Q SGLIDCKVCKGAGLIFCKKCGGSGYSRRL
Sbjct: 121 QQSGLIDCKVCKGAGLIFCKKCGGSGYSRRL 149
BLAST of Lcy03g017360 vs. NCBI nr
Match:
XP_038879992.1 (protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic isoform X1 [Benincasa hispida])
HSP 1 Score: 258.8 bits (660), Expect = 2.8e-65
Identity = 134/154 (87.01%), Postives = 141/154 (91.56%), Query Frame = 0
Query: 1 MSALPSTAALHVLPQLPLLKPEAPLLYGCSCASASAATTSSACSTSAAAIQPIAPVIHPV 60
MSALPSTAAL LP LPLLKPE PLLY CSC ASAATTSSA STSAA+++PI P+IHPV
Sbjct: 1 MSALPSTAALQFLPHLPLLKPEVPLLYCCSC--ASAATTSSAVSTSAASMRPIGPLIHPV 60
Query: 61 LLFNSFDA---PLDTQTFLATFSVLVAISLSLFLGLKGGPVPCERCAGNGGTKCVFCDNG 120
LLF+SFD+ PLDTQTFLATFSVLVAISLSLFLGLKGGPVPCERCAGNGGTKCVFCDNG
Sbjct: 61 LLFDSFDSFDTPLDTQTFLATFSVLVAISLSLFLGLKGGPVPCERCAGNGGTKCVFCDNG 120
Query: 121 KMQQPSGLIDCKVCKGAGLIFCKKCGGSGYSRRL 152
KMQQ SGL+DCKVCKGAGLIFCKKCGGSGYSRRL
Sbjct: 121 KMQQQSGLVDCKVCKGAGLIFCKKCGGSGYSRRL 152
BLAST of Lcy03g017360 vs. TAIR 10
Match:
AT3G44020.1 (thylakoid lumenal P17.1 protein )
HSP 1 Score: 151.4 bits (381), Expect = 5.9e-37
Identity = 71/101 (70.30%), Postives = 84/101 (83.17%), Query Frame = 0
Query: 56 VIHPVLLF--NSFDAP---LDTQTFLATFSVLVAISLSLFLGLKGGPVPCERCAGNGGTK 115
+IHP +LF ++FD +DTQTF+ T S++VAI+LSLFLG KG PVPCERC GNGGTK
Sbjct: 59 IIHPSVLFLSSAFDGGGGFIDTQTFIVTISLVVAIALSLFLGFKGDPVPCERCGGNGGTK 118
Query: 116 CVFCDNGKMQQPSGLIDCKVCKGAGLIFCKKCGGSGYSRRL 152
CVFC GKM+ SG++DCKVCKG+GLIFCKKCGGSGYSRRL
Sbjct: 119 CVFCLEGKMKVESGMVDCKVCKGSGLIFCKKCGGSGYSRRL 159
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
A0A2K3DZC4 | 2.3e-09 | 32.71 | Protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic OS=Chlamydomonas reinhardtii OX... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1BZ42 | 2.0e-69 | 92.11 | uncharacterized protein LOC111007052 OS=Momordica charantia OX=3673 GN=LOC111007... | [more] |
A0A5A7UVF5 | 8.6e-68 | 89.40 | Protein disulfide-isomerase LQY1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27... | [more] |
A0A1S3BXK6 | 8.6e-68 | 89.40 | uncharacterized protein LOC103494197 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10... | [more] |
A0A5D3DYE8 | 2.1e-66 | 88.74 | Protein disulfide-isomerase LQY1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676... | [more] |
A0A0A0LQ07 | 4.7e-66 | 87.42 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G025260 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
XP_022134916.1 | 4.2e-69 | 92.11 | uncharacterized protein LOC111007052 [Momordica charantia] | [more] |
XP_008453507.1 | 1.8e-67 | 89.40 | PREDICTED: uncharacterized protein LOC103494197 isoform X1 [Cucumis melo] >KAA00... | [more] |
TYK28514.1 | 4.4e-66 | 88.74 | protein disulfide-isomerase LQY1 [Cucumis melo var. makuwa] | [more] |
XP_004137357.1 | 9.7e-66 | 87.42 | protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic [Cucumis sativus] >KGN63893.1 h... | [more] |
XP_038879992.1 | 2.8e-65 | 87.01 | protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic isoform X1 [Benincasa hispida] | [more] |
Match Name | E-value | Identity | Description | |
AT3G44020.1 | 5.9e-37 | 70.30 | thylakoid lumenal P17.1 protein | [more] |