Lcy01g014160 (gene) Sponge gourd (P93075) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGCCAATTTAGGGCAAGACCCATAGGTCCAAGGCCACGAAAAAGCCAGCCCTTTGGAGTCTTGGGTGTCGAGGTCTAGTCGAGGGGTGTGTCCGAATTAACATAAGTATCAGAGTGTGTTGAAGTACCACAAATCTTTTTAAATGCTAGCTCGGACAATCTCTAGGTGCTCGGACCGAACCGGGACAACCCGACCAGATGTTTCCACCAACACATAAAATTTAAAGCAAATTACAAATTTGAAAATTGAGTTTAAAAAGAAACTAAATTGAATAAAATTAGAAACAATTAATTAATTATTAATTAATTAATTAAGTGATTTTTATTTTGGCAATTCCTTAATTACGGGAACACAAAGACGACAATTATCGTCTCCTTCGTCTCTTGGTAAGCAGTTGCGAGGAAAATCTCCTTCTGACGTGGTCTGGTTCTGTCAGTTTTATCCTTTTCTTTTCGCCATTCCTATTTTTGGGTTTCTATAAATCCCCTTCAATCTCAATCCCACCCTAAACCAACCACACCTTCTTCAATTCTTTCAAATCTCTCAACAACTCCCTCTGCTACTTCTTCTCTTGCAGGTAATCTTCTTTTTCTGATCTTCAATCTGCTCTTTTCATTGTGTTTTTTCCCCTTTCGATTGGGGTTTGTGTTTGCTGCAGATCTGCCGCCCTTCTCTTTCTTGTTCTCTTTAAGTTCAGTTCAGTTGTTTCTTTGCATCCTTGGAGTTTAGATTTCCGTGGTTCTTGTTTGGAATTTTTGGTAGGTGGGGTTGTGTGAATTGGCTTCTTTGTACTTGTGCAGCTTGTTAAATCCTCTGCAATGTTGTGTCGTTGTGTTTCTGTGACTGTTTGTGCTATATGCCATTGTTTTGCTTGCTTTGGATTGTGCTGTTTATGGGTGTCGATTTTTGAGCTTCTTTAATTGTCGGCTCATTTTTGGTCTGGTAATTGAGCTCCTATGTCTGTCGTTTCTGCTGATTGTGATTCTGACGAAATGGAACTTTTGTTAGTCTTGGAGAACTGTATGAAGCTGCTTTCGTTCTGAGAATTCTGTGGCTTAACTTCTTTGGTTCATCTTGCTTTCCGCGATGCTACAATGTTGAGGGATTCTTTTTACTTTTTGCTCAAGTTCGAGTTCGGTGTCTGTGTGAAAGATTAATTGATTCCAGATCCGGTTGAAGAGCTTTTTCCTTGTACCCTCTTGAAGGGGACTGTTGGATCCAATTTGTTGGCTGCTTTGCTTGCATTTCCCTCCATATTTTTGCCATCCTGGGCTTCTACTTCATTATGAAGAAGCTGCTGAGTTATTTCCTGTAAATTTTGATCCTCCCCGTACATACATGCATACCCTCGCCCATTAATTACTGAATAAGAGAACGTGTAGAACTCAGTACTGGGCGATGGACGAGTCTTTTTTGTCCATGCCCGTGTCACCTGCTTGTTTATGCGTGTGATTTTTCTGTCTATTATCTTTTATTTTCTTTGTTTCTCTTTCTACTCTATTGAAAGATAAGCATAAATGATATGAACTGGTTTTGGTTTTACATTCTTTTTGTATCCTTTTAAGTCTTATCTTTTCTTAGACTCCATAATTCTTGTGATATGTGCACCTAAAGTAACAGTCAGCCAATCTGTATTTCCCTTTGATGTTAAGTGTGTAATCTTGGGATTTAGTTTTCCCAACTCATTTATGATCTTTTTTTCAGACTTTCAGTTTCCCATTTTTGATATGGAAGTTGTCGGGGGCTAACTTGGCAAGTTCTATGGCATTGACTGGTATGTTTGTCTTTCCTCTTCAATTCCGACGCTGTGCATATGCTCATCAGCTTCCACTTTCACAAAAACTAGATTTAAGCTTTATGCTGCATGATGTGTAGGTAATTTGGCAATGCACAGAGGAAGAGGGAGCTCTATAAAGTTGCAGAACATCACTCATACTGCCATATCTAGTAAACATAAGCGTGAATTTTCTGGCATGGACTTTGAATCGGACTGGACAAGGCACAGAAAGTCCTCTGTATTTGCTGCTCAAGTGATCCGTTCTGCAACTTCCTTTATGCCTTGGTCTTGCAGAATCCCAATTGGTGAAGGATATCACGAATTTCTTTAA ATGAGCCAATTTAGGGCAAGACCCATAGGTCCAAGGCCACGAAAAAGCCAGCCCTTTGGAGTCTTGGGTGTCGAGACTTTCAGTTTCCCATTTTTGATATGGAAGTTGTCGGGGGCTAACTTGGCAAGTTCTATGGCATTGACTGGTAATTTGGCAATGCACAGAGGAAGAGGGAGCTCTATAAAGTTGCAGAACATCACTCATACTGCCATATCTAGTAAACATAAGCGTGAATTTTCTGGCATGGACTTTGAATCGGACTGGACAAGGCACAGAAAGTCCTCTGTATTTGCTGCTCAAGTGATCCGTTCTGCAACTTCCTTTATGCCTTGGTCTTGCAGAATCCCAATTGGTGAAGGATATCACGAATTTCTTTAA ATGAGCCAATTTAGGGCAAGACCCATAGGTCCAAGGCCACGAAAAAGCCAGCCCTTTGGAGTCTTGGGTGTCGAGACTTTCAGTTTCCCATTTTTGATATGGAAGTTGTCGGGGGCTAACTTGGCAAGTTCTATGGCATTGACTGGTAATTTGGCAATGCACAGAGGAAGAGGGAGCTCTATAAAGTTGCAGAACATCACTCATACTGCCATATCTAGTAAACATAAGCGTGAATTTTCTGGCATGGACTTTGAATCGGACTGGACAAGGCACAGAAAGTCCTCTGTATTTGCTGCTCAAGTGATCCGTTCTGCAACTTCCTTTATGCCTTGGTCTTGCAGAATCCCAATTGGTGAAGGATATCACGAATTTCTTTAA MSQFRARPIGPRPRKSQPFGVLGVETFSFPFLIWKLSGANLASSMALTGNLAMHRGRGSSIKLQNITHTAISSKHKREFSGMDFESDWTRHRKSSVFAAQVIRSATSFMPWSCRIPIGEGYHEFL Homology
BLAST of Lcy01g014160 vs. ExPASy TrEMBL
Match: A0A0A0KD56 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G365200 PE=4 SV=1) HSP 1 Score: 173.3 bits (438), Expect = 6.3e-40 Identity = 88/104 (84.62%), Postives = 89/104 (85.58%), Query Frame = 0
BLAST of Lcy01g014160 vs. ExPASy TrEMBL
Match: A0A5A7VCL2 (F-box/kelch-repeat protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G00410 PE=4 SV=1) HSP 1 Score: 124.0 bits (310), Expect = 4.4e-25 Identity = 63/77 (81.82%), Postives = 64/77 (83.12%), Query Frame = 0
BLAST of Lcy01g014160 vs. ExPASy TrEMBL
Match: A0A5J5ASN4 (Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_033169 PE=4 SV=1) HSP 1 Score: 100.9 bits (250), Expect = 4.0e-18 Identity = 53/88 (60.23%), Postives = 65/88 (73.86%), Query Frame = 0
BLAST of Lcy01g014160 vs. ExPASy TrEMBL
Match: A0A5J5AWB6 (Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_033166 PE=4 SV=1) HSP 1 Score: 99.8 bits (247), Expect = 8.8e-18 Identity = 53/88 (60.23%), Postives = 65/88 (73.86%), Query Frame = 0
BLAST of Lcy01g014160 vs. ExPASy TrEMBL
Match: A0A444WZZ5 (Uncharacterized protein OS=Arachis hypogaea OX=3818 GN=Ahy_B03g066056 PE=4 SV=1) HSP 1 Score: 93.2 bits (230), Expect = 8.2e-16 Identity = 48/87 (55.17%), Postives = 60/87 (68.97%), Query Frame = 0
BLAST of Lcy01g014160 vs. NCBI nr
Match: KAE8647234.1 (hypothetical protein Csa_019002, partial [Cucumis sativus]) HSP 1 Score: 171.8 bits (434), Expect = 3.8e-39 Identity = 87/100 (87.00%), Postives = 87/100 (87.00%), Query Frame = 0
BLAST of Lcy01g014160 vs. NCBI nr
Match: KAG7020136.1 (hypothetical protein SDJN02_16818 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 166.0 bits (419), Expect = 2.1e-37 Identity = 81/92 (88.04%), Postives = 85/92 (92.39%), Query Frame = 0
BLAST of Lcy01g014160 vs. NCBI nr
Match: KAG6585216.1 (hypothetical protein SDJN03_17949, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 166.0 bits (419), Expect = 2.1e-37 Identity = 81/92 (88.04%), Postives = 85/92 (92.39%), Query Frame = 0
BLAST of Lcy01g014160 vs. NCBI nr
Match: KAA0064737.1 (F-box/kelch-repeat protein [Cucumis melo var. makuwa]) HSP 1 Score: 124.0 bits (310), Expect = 9.0e-25 Identity = 63/77 (81.82%), Postives = 64/77 (83.12%), Query Frame = 0
BLAST of Lcy01g014160 vs. NCBI nr
Match: KAG2706649.1 (hypothetical protein I3760_05G113500 [Carya illinoinensis] >KAG6653944.1 hypothetical protein CIPAW_05G111800 [Carya illinoinensis] >KAG6712544.1 hypothetical protein I3842_05G109000 [Carya illinoinensis] >KAG7978834.1 hypothetical protein I3843_05G101700 [Carya illinoinensis]) HSP 1 Score: 106.3 bits (264), Expect = 1.9e-19 Identity = 56/82 (68.29%), Postives = 62/82 (75.61%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
|