Lcy01g003250 (gene) Sponge gourd (P93075) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTGTGGAAATTTTCCAGGTACTACTCTCATTAATTGTTTATCACGTCAGCATCATCTAAATAATAATGTGGACTCCAATAGCATTAAAGAATTACCGGTATAAAGGAAATTTTCCTAGAATAAACGCAAGGAGTAAGTACTTGGAGATCATAAGAAATTTGGAAAAAAAAATATCTTTTTGGTTTCTGAGTTTTAAAGAATATGTGTGATTAGTCCCTGAGTTTTTTAAATGAACATTTTTAGTCTATAAATTTTGAGAAATAGGTTTAAAAGGTGCCTAAATTTTCAAAATGAACCTTTCTAGTCATTGAGTTTTGAGTAATAGGTTAAAAGGTTCGTTCCTCATATTATTTTTTCAACTTTTTAAAATTAATATATTTTTAAATTTTTTTAATTTAAAAAAACCGTGGATATTAAAATATAATAAAATTATTTAATTTTAAAAATTTTGAAAAAAATGATATGAGAAGACCTTCTAAACCTATTTCTCAAAACTCAGGGACCAAGAAGGTCTATTTTGAAAACTTAATTAAGGACCTTTTAAAATGATTTCTCAAAACTTAAGGACTAAAAATGTCTATTTTAAAAACTTAGAGACCAAAGGTACTTATTCCTTCAAACTCGAAGAACTAAAAAGGTATTATTCCATATAAATTTTTTCAAGGTTGCATAACGAGTGAAGGAGATTTGGTGAAAGTTTCCAAGTAGAGCTAGATATATCGTAGCAAAGTTCCAGTTTCTTCTTATATATGCTGCAATTGCCATTGATAAGTTGAACTGCTTGACGAGAATTGGATTCAAAAGAAATAGAAGTAAAACCCAATCGCAACCCCAAGAATATCCTAGCACAAAATCTAATAGTTTAGACCTAGTTTGATAACAAAATTAAGCTTATAAACACTACTTTCACCTTCAAACTTCTTTGTTTTGTTATCTATATTCTTTCCTTGTTTTCAAAAACCAAGTTAAGTTTTAAAAACTAAAAAATTAGGCCCCGTTTGATGATCATTCCATTTTATGTTTTTGGTTTTTGAAAATTAAGCTTATAAACACTCCTTACACCTATACATTTCTTTGGTTTTCTATCTTTCCATGTTTTCAAAAACCAAGTCAAATTTTGAAAAAAAAAAAATTCAAAAACTTGTTTTGTTTTTGAATTTTAGTTAGGAATTCAAATGTGTCCTTAACAAAGATGAAAACCATTATAATGAAATTAGGGGAAAACAAACATAATTTTCAAAAACCGAAAACAAAAAATCAAATAGGGGGCCTAAGTTCTTGTTGGTAACAATTTGGTTTTTTTGTTTTTGGTTTTTAAAAATTATGATTGTTTTTTCATATCTTTATTAAAGAAACATTTGAATCCGTATTCAAATTTCAAAAATAAAAATAAGTTTTCGAAAACTATTTTTTTTAGTTTTCCAAACTTGATTTGGTTTTTGAAACACATGGAAGAAGGTAAATAACAAAACAAAACAAAGAAACTTATAGGCTGGAGTAATGTTTATAAGCTTAATTTTCAAAAATAAAAAACCAACTTAAAACCCCATTTGATGACCATTATTTGGTTTTTGACTTTTTAGTTTTTCAAAATTATGTTTGTTTTTTTCCCAATTTCCTTACAATGATTTCCATCTTCGTTAAGAACCCATTTGAATTCCTAGCCAAATTTCAAGAACAAAAACAAGTTTTTGAAAACTAAATTCCCATTTTATAACCATTTGATTTAGTAAAATTATGTTTGTTTTCTTCCTAATTTTCTTAAAGACACATTTGAATTCTTAGCAAAATTCAAAAACAAAAATAAGTTTGTTTTCAAAACTTGAACTGGTTTTTAATTTGAAAATATGAAAATTAGAAGGTAGGTAAAAAAACAAAGAAACTTATGAATAGAAGTAGTGTTTATAGGCTTAATTTTTAAGAACCAAAAACCAAAAACAAAATGGTTATCAAATATGGCTACTTTTTTTAGTTTTCAAATTTTGATTTTTTAAAACAATGGAAAGAAGATAGATAAAAAAAAAAAAAATAAGCTTATAGGTGTAACTAGTGTTTATAAATTTCAATTTTCAAAAACCAAAGTTAAAAAACAAAATGATTATCAAACGGAAACTCAAACATAAATCAGTAAACAAGACACTATTACATATCTTTATTTTTTAAATTTTAGTTTGATTTGCATCCAACCGTTGTTAAACTCAAGGAAAAAAAATAATAACAATATTTTTATTTGAGAAGCAAACTTTTTCTCACACAAATAACCTTATAGTTAGTAAATTACAAAAATAACCCCAAGTTTTGCTATAAAAGGCCACCTAAGTTTGAACTTCCCAACAGGCAACTCAAACCCAAAAAGCCATAATGTCTCTTAAATACTTTCTTGTGCTTCTTCTCGCAGTGGTGCTTCTTACCACTACTCAAGCTTTGAAACATCCGTCGGACTCCAACCAGGAAGTGATTCCGGTCACTGACCAAAAGCTTCCGACCACCACCGCCACCGACACGGATCCTTTATCGGAGGACGAGGAATCCAAGTACTACAAAAGGAAACCACGCTACAGGAAGTACCCACCCTACAAGAAGCACCCACCATACAAAAAACGTCCCCCATACAAGAAGTATCCACCATCTTCCAACTGA ATGTGTGGAAATTTTCCAGTGGTGCTTCTTACCACTACTCAAGCTTTGAAACATCCGTCGGACTCCAACCAGGAAGTGATTCCGGTCACTGACCAAAAGCTTCCGACCACCACCGCCACCGACACGGATCCTTTATCGGAGGACGAGGAATCCAAGTACTACAAAAGGAAACCACGCTACAGGAAGTACCCACCCTACAAGAAGCACCCACCATACAAAAAACGTCCCCCATACAAGAAGTATCCACCATCTTCCAACTGA ATGTGTGGAAATTTTCCAGTGGTGCTTCTTACCACTACTCAAGCTTTGAAACATCCGTCGGACTCCAACCAGGAAGTGATTCCGGTCACTGACCAAAAGCTTCCGACCACCACCGCCACCGACACGGATCCTTTATCGGAGGACGAGGAATCCAAGTACTACAAAAGGAAACCACGCTACAGGAAGTACCCACCCTACAAGAAGCACCCACCATACAAAAAACGTCCCCCATACAAGAAGTATCCACCATCTTCCAACTGA MCGNFPVVLLTTTQALKHPSDSNQEVIPVTDQKLPTTTATDTDPLSEDEESKYYKRKPRYRKYPPYKKHPPYKKRPPYKKYPPSSN Homology
BLAST of Lcy01g003250 vs. ExPASy TrEMBL
Match: A0A6J1EWV3 (uncharacterized protein LOC111436870 OS=Cucurbita moschata OX=3662 GN=LOC111436870 PE=4 SV=1) HSP 1 Score: 120.9 bits (302), Expect = 2.5e-24 Identity = 65/80 (81.25%), Postives = 73/80 (91.25%), Query Frame = 0
BLAST of Lcy01g003250 vs. ExPASy TrEMBL
Match: A0A0A0LI79 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G176190 PE=4 SV=1) HSP 1 Score: 92.0 bits (227), Expect = 1.3e-15 Identity = 59/86 (68.60%), Postives = 67/86 (77.91%), Query Frame = 0
BLAST of Lcy01g003250 vs. ExPASy TrEMBL
Match: A0A0A0LNP2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G176690 PE=4 SV=1) HSP 1 Score: 85.9 bits (211), Expect = 9.1e-14 Identity = 57/86 (66.28%), Postives = 65/86 (75.58%), Query Frame = 0
BLAST of Lcy01g003250 vs. ExPASy TrEMBL
Match: Q8H0R6 (Proline-rich protein OS=Cucumis sativus OX=3659 GN=prp1 PE=2 SV=1) HSP 1 Score: 85.9 bits (211), Expect = 9.1e-14 Identity = 57/86 (66.28%), Postives = 65/86 (75.58%), Query Frame = 0
BLAST of Lcy01g003250 vs. ExPASy TrEMBL
Match: A0A5A7VEY7 (Repetitive proline-rich cell wall protein 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G00050 PE=4 SV=1) HSP 1 Score: 85.1 bits (209), Expect = 1.5e-13 Identity = 53/82 (64.63%), Postives = 61/82 (74.39%), Query Frame = 0
BLAST of Lcy01g003250 vs. NCBI nr
Match: XP_023513909.1 (repetitive proline-rich cell wall protein 3-like [Cucurbita pepo subsp. pepo] >KAG6593838.1 hypothetical protein SDJN03_13314, partial [Cucurbita argyrosperma subsp. sororia] >KAG7026170.1 hypothetical protein SDJN02_12669, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 123.2 bits (308), Expect = 1.1e-24 Identity = 64/80 (80.00%), Postives = 75/80 (93.75%), Query Frame = 0
BLAST of Lcy01g003250 vs. NCBI nr
Match: XP_022930415.1 (uncharacterized protein LOC111436870 [Cucurbita moschata]) HSP 1 Score: 120.9 bits (302), Expect = 5.2e-24 Identity = 65/80 (81.25%), Postives = 73/80 (91.25%), Query Frame = 0
BLAST of Lcy01g003250 vs. NCBI nr
Match: WP_219729224.1 (hypothetical protein, partial [Pectobacterium odoriferum]) HSP 1 Score: 111.3 bits (277), Expect = 4.2e-21 Identity = 63/83 (75.90%), Postives = 71/83 (85.54%), Query Frame = 0
BLAST of Lcy01g003250 vs. NCBI nr
Match: POE15980.1 (hypothetical protein BV923_23575 [Pectobacterium odoriferum]) HSP 1 Score: 111.3 bits (277), Expect = 4.2e-21 Identity = 63/83 (75.90%), Postives = 71/83 (85.54%), Query Frame = 0
BLAST of Lcy01g003250 vs. NCBI nr
Match: XP_004147144.2 (repetitive proline-rich cell wall protein 3 [Cucumis sativus]) HSP 1 Score: 92.0 bits (227), Expect = 2.6e-15 Identity = 59/86 (68.60%), Postives = 67/86 (77.91%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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