Lag0040596 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0040596
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
Descriptionprotein MIZU-KUSSEI 1
Locationchr13: 6399646 .. 6400368 (-)
RNA-Seq ExpressionLag0040596
SyntenyLag0040596
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCGAGCCGAGAAAATCCTCGTCGCCGGCGCCGCCGCTACAGTCGTCTCCGCCGTCGTCACCGCAGCCCGCAATTTCACTCCAACCATCTCCAAAACGATCAGGTTTCTCAAAGCCTACAAAACTCCTCCGGCAAGTCCGTTCCGTGTTCCGCACACTTCCGATTCTGTCGCCGGCGTGCCGAATTCCACTCAACGGCAGTCGGCTCCACGACGGCCACGTCCACGGCGGCGTTCGGATCACCGGAACGATCTTCGGATACCGGAAGTCGCGAGTGAATCTGGCGTTTCAAGAAAGCCCTAGGTGCCTTCCGATGCTAATTCTGGAATTGGCGATTCCGACGGGGAAACTCCTCCAGGACATGGGGCTAGGGCTCGTGAGACTCGCCTTGGAGTGCGAGAAGCGGCCGTCGGAGAAGAGGAAGATTCTGGAGGAGCCGATTTGGACATTGTACTCTAATGGAAGAAAGTCGGGATATGGCGTTCGGAGAGATCCGTCCGACGACGATCTGAAAATTATGCAGACTTTGAGCGCGGTGTCGATGGGCGCCGGCGTGATTCCGGCGGAGGACGCGGCGGAGACGGTGGACGGCGATCAATTGACGTACATGAGAGCGCATTTCGAGCGAGTGACTGGATCGAAGGATTCCGAAACTTTTTATATGATGAATCCTGATAGCAGTAATGGTGCTGAACTCAGCATCTTCTTGGTTAGAATTTGA

mRNA sequence

ATGGCCGAGCCGAGAAAATCCTCGTCGCCGGCGCCGCCGCTACAGTCGTCTCCGCCGTCGTCACCGCAGCCCGCAATTTCACTCCAACCATCTCCAAAACGATCAGGTTTCTCAAAGCCTACAAAACTCCTCCGGCAAGTCCGTTCCGTGTTCCGCACACTTCCGATTCTGTCGCCGGCGTGCCGAATTCCACTCAACGGCAGTCGGCTCCACGACGGCCACGTCCACGGCGGCGTTCGGATCACCGGAACGATCTTCGGATACCGGAAGTCGCGAGTGAATCTGGCGTTTCAAGAAAGCCCTAGGTGCCTTCCGATGCTAATTCTGGAATTGGCGATTCCGACGGGGAAACTCCTCCAGGACATGGGGCTAGGGCTCGTGAGACTCGCCTTGGAGTGCGAGAAGCGGCCGTCGGAGAAGAGGAAGATTCTGGAGGAGCCGATTTGGACATTGTACTCTAATGGAAGAAAGTCGGGATATGGCGTTCGGAGAGATCCGTCCGACGACGATCTGAAAATTATGCAGACTTTGAGCGCGGTGTCGATGGGCGCCGGCGTGATTCCGGCGGAGGACGCGGCGGAGACGGTGGACGGCGATCAATTGACGTACATGAGAGCGCATTTCGAGCGAGTGACTGGATCGAAGGATTCCGAAACTTTTTATATGATGAATCCTGATAGCAGTAATGGTGCTGAACTCAGCATCTTCTTGGTTAGAATTTGA

Coding sequence (CDS)

ATGGCCGAGCCGAGAAAATCCTCGTCGCCGGCGCCGCCGCTACAGTCGTCTCCGCCGTCGTCACCGCAGCCCGCAATTTCACTCCAACCATCTCCAAAACGATCAGGTTTCTCAAAGCCTACAAAACTCCTCCGGCAAGTCCGTTCCGTGTTCCGCACACTTCCGATTCTGTCGCCGGCGTGCCGAATTCCACTCAACGGCAGTCGGCTCCACGACGGCCACGTCCACGGCGGCGTTCGGATCACCGGAACGATCTTCGGATACCGGAAGTCGCGAGTGAATCTGGCGTTTCAAGAAAGCCCTAGGTGCCTTCCGATGCTAATTCTGGAATTGGCGATTCCGACGGGGAAACTCCTCCAGGACATGGGGCTAGGGCTCGTGAGACTCGCCTTGGAGTGCGAGAAGCGGCCGTCGGAGAAGAGGAAGATTCTGGAGGAGCCGATTTGGACATTGTACTCTAATGGAAGAAAGTCGGGATATGGCGTTCGGAGAGATCCGTCCGACGACGATCTGAAAATTATGCAGACTTTGAGCGCGGTGTCGATGGGCGCCGGCGTGATTCCGGCGGAGGACGCGGCGGAGACGGTGGACGGCGATCAATTGACGTACATGAGAGCGCATTTCGAGCGAGTGACTGGATCGAAGGATTCCGAAACTTTTTATATGATGAATCCTGATAGCAGTAATGGTGCTGAACTCAGCATCTTCTTGGTTAGAATTTGA

Protein sequence

MAEPRKSSSPAPPLQSSPPSSPQPAISLQPSPKRSGFSKPTKLLRQVRSVFRTLPILSPACRIPLNGSRLHDGHVHGGVRITGTIFGYRKSRVNLAFQESPRCLPMLILELAIPTGKLLQDMGLGLVRLALECEKRPSEKRKILEEPIWTLYSNGRKSGYGVRRDPSDDDLKIMQTLSAVSMGAGVIPAEDAAETVDGDQLTYMRAHFERVTGSKDSETFYMMNPDSSNGAELSIFLVRI
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022957187.11.9e-11992.50protein MIZU-KUSSEI 1 [Cucurbita moschata][more]
XP_022986387.15.4e-11992.08protein MIZU-KUSSEI 1 [Cucurbita maxima][more]
KAG6601106.19.2e-11991.67Protein MIZU-KUSSEI 1, partial [Cucurbita argyrosperma subsp. sororia] >KAG70319... [more]
XP_023511741.14.6e-11891.25protein MIZU-KUSSEI 1 [Cucurbita pepo subsp. pepo][more]
XP_022966953.12.4e-11488.75protein MIZU-KUSSEI 1-like [Cucurbita maxima][more]
Match NameE-valueIdentityDescription
O222271.4e-4048.84Protein MIZU-KUSSEI 1 OS=Arabidopsis thaliana OX=3702 GN=MIZ1 PE=1 SV=1[more]
Match NameE-valueIdentityDescription
A0A6J1GYG49.0e-12092.50protein MIZU-KUSSEI 1 OS=Cucurbita moschata OX=3662 GN=LOC111458655 PE=4 SV=1[more]
A0A6J1J7E52.6e-11992.08protein MIZU-KUSSEI 1 OS=Cucurbita maxima OX=3661 GN=LOC111484137 PE=4 SV=1[more]
A0A6J1HTQ91.1e-11488.75protein MIZU-KUSSEI 1-like OS=Cucurbita maxima OX=3661 GN=LOC111466511 PE=4 SV=1[more]
A0A6J1G2I49.6e-11487.50protein MIZU-KUSSEI 1-like OS=Cucurbita moschata OX=3662 GN=LOC111450060 PE=4 SV... [more]
A0A0A0KPQ79.0e-11287.19Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G584880 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT5G06990.15.8e-7960.87Protein of unknown function, DUF617 [more]
AT2G21990.17.2e-6152.52Protein of unknown function, DUF617 [more]
AT4G39610.11.2e-5547.81Protein of unknown function, DUF617 [more]
AT5G42680.12.0e-4246.15Protein of unknown function, DUF617 [more]
AT5G42680.22.0e-4246.15Protein of unknown function, DUF617 [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006460Protein MIZU-KUSSEI 1-like, plantTIGRFAMTIGR01570TIGR01570coord: 81..240
e-value: 3.9E-68
score: 226.4
IPR006460Protein MIZU-KUSSEI 1-like, plantPFAMPF04759DUF617coord: 81..239
e-value: 1.5E-65
score: 220.2
IPR006460Protein MIZU-KUSSEI 1-like, plantPANTHERPTHR31696PROTEIN MIZU-KUSSEI 1coord: 6..240
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 11..26
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..39
NoneNo IPR availablePANTHERPTHR31696:SF73EXPRESSED PROTEINcoord: 6..240

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0040596.1Lag0040596.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0010274 hydrotropism