Lag0037016 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0037016
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	40S ribosomal protein S29
Location	chr2: 2793868 .. 2800345 (+)
RNA-Seq Expression	Lag0037016
Synteny	Lag0037016

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAATGGTGGAGCAAGATGACTTCTCCCTTGCGAAGATTCACCACCAACGTCGCCTCACGTTTCGGATTTCGCAAACGCGGTGCGTGATTTCTTTAGTGAATTGCAAATTCTTTCGGTGTAGGACTGATTCTGTGGAATTGAAATTGGTGATGAGTCGAATTAGAAATTTAGAACGACGGATCGGAGTTTGTTGTGAGTTTGTTGATGTTTAACTTTTTCAAAACTTGAGAAATTGAATAGAGAATGAATGGTTGGGGATGTTGAAATGGAGCAGGGCTATTGAAACTAGGGCGAGATGTGAAGGCTTGTGAGTACGAGGACGTGCACGTGATGTGGGAGATGCTGAAGAAAAACGAAACAGAGCAAGTTGGATCCTCGGAAGGGCGTCGAAAGAGGAGATCCTTGTGGAATATATTTTTTTGGGCTCGATCTGGCTGCAAATTCTGAGAAATCCACCTGGTAAATCCAACACCATGAATTTGGGTCATATTTTAACCAGGTAATTAAGAAGAGATTATTATTGAAATGAAAAAGAAAAAAAAAAAAAAAAAAAGAGGCATCGATATATCAGCTAAGATGTCACTTCTTTGTTAGAATCTAGCACTATATAGATATGAACTGATTACCTAGTTTAATCCGATCTTTATGACCCCCTCTCTTCTCTCCTTGCTTCGTTATCTATGAAATAATAAACTAAACTAGATTTGGATGTATGTCTCCTATATAATTTCATCTTATGATTTATTTATTTAGTCCATTTCTTCTTCTCTCTACTCCTGACTAGAGCTGACATTGACAATTGATCATGTGTTCTTCTGGGTTGGAATGGGTCTACGTCTTCTTCATATACATGCAAGCATTACTTGAAAGTGAAAAGAAAATTTGGCTAAACATCAATATGTCCCAACCCTGTTTAAATTGAATACGGAGCAACGTTTTGTTTTCAAACTCAAAATTGTGTTGGATGAGTAAGTGATGTTAGTTACAGTATTTTTGGATATTGTGTTCTGTAGCTGAACCTAAGCATAGACAACCAAGTAAGGTACAGCCTTTGATCTTTGATCCCAAATCATCTACTTTCCCACCTATTCTCTCACTCAAAAAAGAAAAAAAAACTGTTTTGTAGCTTAATTCAAAACTTGTTCTAATTGAAATATAAGGTATGATTTTTTTTTTAAGGGGGAGTGTTGAACTTTGGACCGATCTATTGAGAGATTGCAAAACTGTCAGTCCACCGTTCATCTTCATCGAATAATTTCTCTTGATTAAGACGTGATAATGGCGAATTTGTATTTATTTATTTTTTATTTTCCTCTCTTTTCTGAAACAAATAATAGCCAGAATTTCAATCACACGGTTATAATAATATTTGTCGTCTCGCGTGGCAGACATTCGTTGACGTCTTCTATGCTGTGGAATGGGATTCAATAGCCAAAATCTTTCTAAAAAAAGGCCGAAATCAAATTCGCGGGAAAACAACACTTTTGCTAAACGCCGAAAGAATAATAGTTAATTTTGTCCATATAATTTAGAACATAATAATCATTTATGTACATTAATTTTACTAATATTTCTAGACCACTATAAAATTATTAATAAAAGTAAGTTATAAGAAAATCATATCATTTTTAATTTGAAAAAAAATCCTTAAATTTTATAAAAGATTTTTTTTACTAATTCATTCTCAATCATCAACCAATTTATAACGAGTAATTGAAAACATTTCCTTAGTTTATTTTTTTTTTCTTTTTACATGTGAGGGTGGGGGACCCGAATCACAAACTTCCGAGTTATGCCAGTTGAGCTGTGTTTATGTTGACATTCACTTAGTTTAACTTGATTCTCAAACTTTCAACTTTGTAATATAATAATAATACAATTTTATTAAACTATAAAAAAAGCTTTAATGTGTAACAATATCAATTTGTACTCATCTAAATTGTTTATACTTTTTATTAGATTGTTACATACTATATTTTAGAGGCTAAATTATTATAGATTTCAAATTGCGTGAATTAACTTGATACAAATTAAAGTTTTAAAGACAAATTTGTTACTTTTCACTAAAAATGTTTAATTAACCAAGAAAAAAAAAACTAAAGCGAGCAACCCTCGATCAAGAAGTCTCTCCACTCAAAATGTCATTTTGAAAAGATGAAAAAATAAAAAGGGGAAAAAAAAAAAACTCGAAAAGAGCTCGAGAAAAGGGAAGGTTGACTGTGTTTTATATCAAATACAAAACGGTGCGTTTGAAGAGGCGGTTTTATCTTGCGGTGGTGTTGGTATCCGGAAGCTGCTGTATATAAACGTCACAGCCGTCTAGGGTTTAAAGATTCTTCCAATTTAGAGAAGCGGCTGTCAGAGTTGAAAAGGGTTCCTACGAAGAAGACGATGGGACATTCAAACGTGTGGAATTCACATCCAAAGAACTATGGACCTGGTTCTCGTACTTGGTATGCCTCCTCCTCCTATCTCAATTTTCCGCTTCTTCACTCAAATTTGCCATTCTTAATTTCTTGAGATTGGATTTTGATCACGAACTCTGCCCTTCAAACTGTTTGTATAATTCAAACTTGTTGGCTCGGATTTTGCATTCGACTGTTATAGACTTTGACCAATTAGATTGCACTGTTCTCGCGAGCATAAACTAAATCGGAAAAATAAGCTGATTCTTGAATTTGACCACAACCCTCGTTTGCACAAAACATCTACTATCTTCATCTTAATATTTGGGTGCTTGTTATTTTCCAGCCGAGTCTGCGGTAACCCCCATGGATTGATCCGCAAGTATGGCCTGATGTGCTGCAGGCAGTGTTTTCGTAGTAATGCCAAAGAAATTGGCTTCATTAAGGTAAAAATAATTTCTTCTCCACCATCCACTTACAATTTCTGTTTCTTCTTGAAATCTTTGCATTTGCCCTTCTGTAACATATTGGTTATAATTCTCCGATGATGCTGATTGTTGCCTATGGTTACAGAAAACAAAATGTTATATACCTTACAACAATCAGTGCAATTAGGATTAGGATACATACATATCAATTCTTTGGCTGCTTATATTTATGATGATGTCTTTGTATTCTGTCTTGCAGTACCGCTGAAAATGGAGCTCTGGTCTACAGAGGCTGCGGACATAAGCATGCTAGTTAGTTTAGTACTTTAGTAGTTACCTGCTTTTTCTTGGTGTAGGCTATTTATATTTAAATTAATGTCCAATCAACCATTATCAAAAGAATTATCTGTTGTTCTTTGCGGCCAAAGAGCATCTGCAATAGAATTGTGGGAGTCAAAGAGGGCGGTGCTAATTATTTATTTCTTTCTTTCTTATTGAGTGTTATGTTTTTTTTTTTAATGCACTTGATGACTGTAGGTATGCTTATTAAATGAAGTTGTTTATTGAAATTGGCTTTCATAATCGGTTTATTTGGTATCACTTGATATTGGGTATATGAAGGTGCTTATTGAATTGGAAGTTTGTTTTATTATTTTAATTCTTTTTATAAATGAATATTTTGGAAGTTTGTTGACAAATATATTAATTTTTTTTTTGGAATACTATTTGTTGCCATGAAAGTAAGTTCATGAGTTTGGGCACACACCAAAATTAAAGATATTATTGTACAGGGTAAATAATAAGTGGGGCAAATAACCACTTAAACTTTTATCCAATATTCAATGTAATCTTAATAGTTTTACATAATTTTCTCAACGCATAACCAACTGGGCAATGTTCCTCCCTTCTCCATGTATTCTTTTTTTGCTCTGCCTTTTATGCACTATGAATATAGTCATGAATCCACATAGTTGTGCTTGCGAAAAGAAATTTCCAATTACTCTTCCAAGCAATGATTAAATTTTTGAAACTGTTATTTGTTTAATGCTTATCACAAATAACATTTTACAAATAAAGTGTTGTAAAATAAAAAAACTTTTTACAAATAATTTTAAATGAAATGAATTGACGAGGTCATATTAATAATTCGTGAACAGCTAATTAGTTAAATTATATTTTTTTTTAATCGAGAGGGAGAGACAGGGAAATACGGCTGTGTTGAACTCGAAAACAGCAGAAAAAAGTTATGACAAGTGAAATTGAAATTCGCAAAACGAAGAGTCGCACGAAGGAAACAAATACTGCTTTAATGGCAAATTAATCGGACTTATGACGGAAAATTAAAAAAAAAAAATAGCAAAACTCAATTTGGAGGTGCGGGGAATCGAACCCCGTGCCTCTCGCATGCGAAGCGAGCGCTCTACCATATGAGCTACACCCCCGTTGATGTTTCACTGTCTCCCAGTTTAAATATTTGTAATATGAAAATAAAACGTGGCGACGGCTCAAATTCCAACTTGATTTAAATTGGTTTGTTCCACACCGCACTGACATTAACTCCACATTCTGGATCCGACCGACCACCCATGCCACATGACATTACTATAAAACATCACATTAAAACTCTCCTGCTTTAGTTTCATTTACTCACTTCCCGACGATAATATTAAATGTCTAAACATCTCCATTCTTCTTCCGACAACCTCATCCACAAGCACAAGCACTTTTGATTTTGCAGGGCTTCTCCCACAAAGACTCTTTGGATTCTTCTTTTCATTTTTGGCCATTTACTCAATTTGGAGTCATCTTCTTGGTACCTTCATTTCTGGGCGTTTGGAGGACATTATGAAGCTTTGTAGGTTTTCGGTTATGCCTTTTGTGCTCCACACTTCTCTATTGGTGCTTTTCTTTTCCAGCAATATCAATGCCTCCTTAAGTTCTGGTAATTTTTGCCTCTTTCTGTTGTTTCAACTTTGAATCACATCCTGTTCCTTGTTTGCTTGTCGTTATAAGTGTTCTTGGCTGGGTTTGTGTTTGCCTGCCCTTATCTGTTCTATCCGATGATGTTTATGTTGACTTCACTATGTCTGCATTTGATAGAAGTTGATTCAAAATATTATTATTATTTTTCTCTCCTGAATGACCATCTCACTGATTAACAAAGGGGGATTTTTTCACTGCAACTACTTGAACAAAATTGAATTTCGGTGGGAAAAATTAGTATTTTTGATGTTCATGGATATGGGTTTACTTTTTTCTTATACTGAGAACCTTCATGTATTGTAAAGAACAGGGGAAATGGTCTAATAAAACAGATGGGACAATCTACAAACACCTAGCAGAGTATATTTTAGACCAAGTAGAGGATAGCTTAAAGAGAATAGACAGAAGAACACAGAAAGTTGAAGTAGCTTCAGCCATGAAATTAGCTAAGCCTATATGCATTGTGCTAATTATGTGGATCATTGCTGCTTTGAGCATATTGAACATATTAAAGGGACAGTATATGAGATTACTAAACTACGTCCAAACACAAATTGGACTTATCTTAGTCTGATTTTGATGTTTTTATGCTTGGTCCTTTCATGTAACTGAGAATTTTGGCTCAGACAAGTAGCTGGCTGATCATCACAGCAAGTTTTTACTTTGCCTTGATCAAGGCCTCACTCCTTTGCCAGTCCTTTTAGTTAAGAGTGTTTCTTTGACTGCCTCCATAGCTGCTATGAATTCTGCATTTTGTTGTGGACTACGCAACAATCTGTTACAATGAGGCCTTCCAGTTTAATTGACTGTCATCAAACATGAAAATCTCTTCCAATGGCCTTCCTCTGTATGTATCACCTCCATAAGATGAATCCATATAATTTTGGTGTTTATCCTCTTCTCTTGTTGCCATTTCACTAGCTGTGCAAGCCATGTTTCAATAACAAATTTGCTTACTACTTATTTTTTAACCTTCTATCAAACTTTCCACAGGTTTCAATTATTTGTTTAAGTTGAATTCAGCCTTGTCTTTCATTTGTTTTGCCACTGACCACTACCATTTTTAAGCTCTTCCTAAGAGTTCAGAAGTTTTTAGCTCTTTCTTTCCCATGCAAGTATTGAACTTTGAAGTCACAGCATAAATTATATAACTAGAAATCGGATCAATTACCGAGCGCGAGTTGTATACATTTTCAAAATATGTTGTTGATATGCCTTCCATGACTGCAGTTGCAGATATGGCTCCAAACATCCGCCATGTAGAGTCAAATGAATATTTGTCAGCCACACCATCAAACAGAAAGCTTAACGTATGCACTTGCTTTGTGAAGGCTTCAAATCCTAGCAACATACATTTTACTTAGAGAAGAACATGGTTTCTTCTTAACTAACAGCTTTATTAGTAATGAGATTAGATCCAATTGTTCATGATTGAAATCTGTTTTTGGTTCTCAGTTGCTGGATAGCGAGCACAGTAACCTGAGAAGGAAGAACGTTCATGTCGGCAACGTAAATCTTTACGACTACAGTCCCATCGATCCAGTTCCAAGCTCAAAGAGATCCTTAAAACATGGACCAATAGAGCATGGCTCTCCTCTTATACCTCATATGCCAAATCCTTCTCCTCCTGATCAACCTCAGCGGGGTGGTTTTGTGTAG

mRNA sequence

ATGGAATGGTGGAGCAAGATGACTTCTCCCTTGCGAAGATTCACCACCAACGTCGCCTCACGTTTCGGATTTCGCAAACGCGGGCTATTGAAACTAGGGCGAGATGTGAAGGCTTGTGAGTACGAGGACGTGCACGTGATGTGGGAGATGCTGAAGAAAAACGAAACAGAGCAACTGAACCTAAGCATAGACAACCAAGTAAGAGGCGGTTTTATCTTGCGGTGGTGTTGGTATCCGGAAGCTGCTGTATATAAACGTCACAGCCGTCTAGGGTTTAAAGATTCTTCCAATTTAGAGAAGCGGCTGTCAGAGTTGAAAAGGGTTCCTACGAAGAAGACGATGGGACATTCAAACGTGTGGAATTCACATCCAAAGAACTATGGACCTGGTTCTCGTACTTGCCGAGTCTGCGGTAACCCCCATGGATTGATCCGCAATACCGCTGAAAATGGAGCTCTGGTCTACAGAGGCTGCGGACATAAGCATGCTAGGCTTCTCCCACAAAGACTCTTTGGATTCTTCTTTTCATTTTTGGCCATTTACTCAATTTGGAGTCATCTTCTTGGTACCTTCATTTCTGGGCGTTTGGAGGACATTATGAAGCTTTGTAGGTTTTCGGTTATGCCTTTTGTGCTCCACACTTCTCTATTGGTGCTTTTCTTTTCCAGCAATATCAATGCCTCCTTAAGTTCTGTTGCAGATATGGCTCCAAACATCCGCCATGTAGAGTCAAATGAATATTTGTCAGCCACACCATCAAACAGAAAGCTTAACTTGCTGGATAGCGAGCACAGTAACCTGAGAAGGAAGAACGTTCATGTCGGCAACGTAAATCTTTACGACTACAGTCCCATCGATCCAGTTCCAAGCTCAAAGAGATCCTTAAAACATGGACCAATAGAGCATGGCTCTCCTCTTATACCTCATATGCCAAATCCTTCTCCTCCTGATCAACCTCAGCGGGGTGGTTTTGTGTAG

Coding sequence (CDS)

ATGGAATGGTGGAGCAAGATGACTTCTCCCTTGCGAAGATTCACCACCAACGTCGCCTCACGTTTCGGATTTCGCAAACGCGGGCTATTGAAACTAGGGCGAGATGTGAAGGCTTGTGAGTACGAGGACGTGCACGTGATGTGGGAGATGCTGAAGAAAAACGAAACAGAGCAACTGAACCTAAGCATAGACAACCAAGTAAGAGGCGGTTTTATCTTGCGGTGGTGTTGGTATCCGGAAGCTGCTGTATATAAACGTCACAGCCGTCTAGGGTTTAAAGATTCTTCCAATTTAGAGAAGCGGCTGTCAGAGTTGAAAAGGGTTCCTACGAAGAAGACGATGGGACATTCAAACGTGTGGAATTCACATCCAAAGAACTATGGACCTGGTTCTCGTACTTGCCGAGTCTGCGGTAACCCCCATGGATTGATCCGCAATACCGCTGAAAATGGAGCTCTGGTCTACAGAGGCTGCGGACATAAGCATGCTAGGCTTCTCCCACAAAGACTCTTTGGATTCTTCTTTTCATTTTTGGCCATTTACTCAATTTGGAGTCATCTTCTTGGTACCTTCATTTCTGGGCGTTTGGAGGACATTATGAAGCTTTGTAGGTTTTCGGTTATGCCTTTTGTGCTCCACACTTCTCTATTGGTGCTTTTCTTTTCCAGCAATATCAATGCCTCCTTAAGTTCTGTTGCAGATATGGCTCCAAACATCCGCCATGTAGAGTCAAATGAATATTTGTCAGCCACACCATCAAACAGAAAGCTTAACTTGCTGGATAGCGAGCACAGTAACCTGAGAAGGAAGAACGTTCATGTCGGCAACGTAAATCTTTACGACTACAGTCCCATCGATCCAGTTCCAAGCTCAAAGAGATCCTTAAAACATGGACCAATAGAGCATGGCTCTCCTCTTATACCTCATATGCCAAATCCTTCTCCTCCTGATCAACCTCAGCGGGGTGGTTTTGTGTAG

Protein sequence

MEWWSKMTSPLRRFTTNVASRFGFRKRGLLKLGRDVKACEYEDVHVMWEMLKKNETEQLNLSIDNQVRGGFILRWCWYPEAAVYKRHSRLGFKDSSNLEKRLSELKRVPTKKTMGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRNTAENGALVYRGCGHKHARLLPQRLFGFFFSFLAIYSIWSHLLGTFISGRLEDIMKLCRFSVMPFVLHTSLLVLFFSSNINASLSSVADMAPNIRHVESNEYLSATPSNRKLNLLDSEHSNLRRKNVHVGNVNLYDYSPIDPVPSSKRSLKHGPIEHGSPLIPHMPNPSPPDQPQRGGFV

Homology

[Close]

BLAST of Lag0037016 vs. NCBI nr
Match: XP_023525817.1 (uncharacterized protein LOC111789323 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 181.0 bits (458), Expect = 1.6e-41
Identity = 97/126 (76.98%), Postives = 105/126 (83.33%), Query Frame = 0


Query: 200 MKLCRFSVMPFVLHTSLLVLFFSSNINASLSSVADMAPNIRHVESNEYLSATPSNRKLNL 259
           MKLCR  VM FVLHTSLL+LFFSS+I +S SS  DM PN  HV SNE LSATPSNRKL L
Sbjct: 1   MKLCRLLVMLFVLHTSLLLLFFSSSICSSSSS--DMTPNQPHVVSNECLSATPSNRKLKL 60

Query: 260 LDSEHSNLRRKNVHVGNVNLYDYSPIDPVPSSKRSLKHGPIEHGSPLIPHMPNPSPPDQP 319
            D++ S+  RKNV V NVNLYDYSPIDPVPSSKRS+KHGPIEH SPLIP+MPNPSPPDQP
Sbjct: 61  QDNDDSSPGRKNVRVDNVNLYDYSPIDPVPSSKRSIKHGPIEHRSPLIPYMPNPSPPDQP 120

Query: 320 QRGGFV 326
           Q GGFV
Sbjct: 121 QPGGFV 124

[Close]

BLAST of Lag0037016 vs. NCBI nr
Match: XP_022941446.1 (uncharacterized protein LOC111446740 isoform X2 [Cucurbita moschata] >KAG7037771.1 hypothetical protein SDJN02_01402 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 180.6 bits (457), Expect = 2.1e-41
Identity = 97/126 (76.98%), Postives = 105/126 (83.33%), Query Frame = 0


Query: 200 MKLCRFSVMPFVLHTSLLVLFFSSNINASLSSVADMAPNIRHVESNEYLSATPSNRKLNL 259
           MKLCR  VM FVLHTSLL+LFFSS+I +S SS  DM PN  HV SNE LSATPSNRKL L
Sbjct: 1   MKLCRLLVMLFVLHTSLLLLFFSSSICSSSSS--DMTPNQPHVVSNECLSATPSNRKLKL 60

Query: 260 LDSEHSNLRRKNVHVGNVNLYDYSPIDPVPSSKRSLKHGPIEHGSPLIPHMPNPSPPDQP 319
            D++ S+  RKNV V NVNLYDYSPIDPVPSSKRS+KHGPIEH SPLIP+MPNPSPPDQP
Sbjct: 61  EDNDDSSPGRKNVRVDNVNLYDYSPIDPVPSSKRSIKHGPIEHRSPLIPYMPNPSPPDQP 120

Query: 320 QRGGFV 326
           Q GGFV
Sbjct: 121 QPGGFV 124

[Close]

BLAST of Lag0037016 vs. NCBI nr
Match: XP_022981997.1 (uncharacterized protein LOC111480980 isoform X2 [Cucurbita maxima])

HSP 1 Score: 177.2 bits (448), Expect = 2.3e-40
Identity = 95/126 (75.40%), Postives = 104/126 (82.54%), Query Frame = 0


Query: 200 MKLCRFSVMPFVLHTSLLVLFFSSNINASLSSVADMAPNIRHVESNEYLSATPSNRKLNL 259
           MKLCR  VM FVLHTSLL+ FFSS+I +S SS  DM PN  HV SNE LSATPSN+KL L
Sbjct: 1   MKLCRLLVMLFVLHTSLLLPFFSSSICSSSSS--DMTPNQPHVVSNECLSATPSNKKLKL 60

Query: 260 LDSEHSNLRRKNVHVGNVNLYDYSPIDPVPSSKRSLKHGPIEHGSPLIPHMPNPSPPDQP 319
            D++ S+  RKNV V NVNLYDYSPIDPVPSSKRS+KHGPIEH SPLIP+MPNPSPPDQP
Sbjct: 61  QDNDDSSPGRKNVRVDNVNLYDYSPIDPVPSSKRSIKHGPIEHRSPLIPYMPNPSPPDQP 120

Query: 320 QRGGFV 326
           Q GGFV
Sbjct: 121 QPGGFV 124

[Close]

BLAST of Lag0037016 vs. NCBI nr
Match: XP_008452634.1 (PREDICTED: uncharacterized protein LOC103493594 isoform X1 [Cucumis melo])

HSP 1 Score: 176.0 bits (445), Expect = 5.2e-40
Identity = 91/117 (77.78%), Postives = 98/117 (83.76%), Query Frame = 0


Query: 209 PFVLHTSLLVLFFSSNINASLSSVADMAPNIRHVESNEYLSATPSNRKLNLLDSEHSNLR 268
           PF+LHTSLL+LFF S  NA  SS ++MA N  HVESNEYL ATPSNRK+ L DSE  N  
Sbjct: 4   PFLLHTSLLLLFFFSINNA--SSTSEMAANNLHVESNEYLFATPSNRKMKLQDSEQRNPT 63

Query: 269 RKNVHVGNVNLYDYSPIDPVPSSKRSLKHGPIEHGSPLIPHMPNPSPPDQPQRGGFV 326
           RKNV VG+VNLYDY PIDPVPSSKRS+KHGPIEHGSPLIPHMPNPSPPDQPQ GGFV
Sbjct: 64  RKNVRVGDVNLYDYHPIDPVPSSKRSIKHGPIEHGSPLIPHMPNPSPPDQPQPGGFV 118

[Close]

BLAST of Lag0037016 vs. NCBI nr
Match: XP_023525816.1 (uncharacterized protein LOC111789323 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 175.3 bits (443), Expect = 8.9e-40
Identity = 97/131 (74.05%), Postives = 106/131 (80.92%), Query Frame = 0


Query: 200 MKLCRFSVMPFVLHTSLLVLFFSSNINASLSSVADMAPNIRHVESNEYLSATPSNRKL-- 259
           MKLCR  VM FVLHTSLL+LFFSS+I +S SS  DM PN  HV SNE LSATPSNRKL  
Sbjct: 1   MKLCRLLVMLFVLHTSLLLLFFSSSICSSSSS--DMTPNQPHVVSNECLSATPSNRKLKV 60

Query: 260 ---NLLDSEHSNLRRKNVHVGNVNLYDYSPIDPVPSSKRSLKHGPIEHGSPLIPHMPNPS 319
              +L D++ S+  RKNV V NVNLYDYSPIDPVPSSKRS+KHGPIEH SPLIP+MPNPS
Sbjct: 61  CTCSLQDNDDSSPGRKNVRVDNVNLYDYSPIDPVPSSKRSIKHGPIEHRSPLIPYMPNPS 120

Query: 320 PPDQPQRGGFV 326
           PPDQPQ GGFV
Sbjct: 121 PPDQPQPGGFV 129

[Close]

BLAST of Lag0037016 vs. ExPASy Swiss-Prot
Match: Q5I7K3 (40S ribosomal protein S29 OS=Triticum aestivum OX=4565 GN=RPS29 PE=1 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 1.4e-11
Identity = 33/51 (64.71%), Postives = 36/51 (70.59%), Query Frame = 0


Query: 114 MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRNTAENGALVYRGCGHKHAR 165
           MGHSNVWNSHPKNYG GSR CRVCGN HGLIR   + G +  R C    A+
Sbjct: 1   MGHSNVWNSHPKNYGAGSRVCRVCGNSHGLIR---KYGLMCCRQCFRSDAK 48

[Close]

BLAST of Lag0037016 vs. ExPASy Swiss-Prot
Match: Q680P8 (40S ribosomal protein S29 OS=Arabidopsis thaliana OX=3702 GN=RPS29A PE=3 SV=2)

HSP 1 Score: 71.6 bits (174), Expect = 1.8e-11
Identity = 30/37 (81.08%), Postives = 30/37 (81.08%), Query Frame = 0


Query: 114 MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRNTAEN 151
           MGHSNVWNSHPK YGPGSR CRVCGN HGLIR    N
Sbjct: 1   MGHSNVWNSHPKKYGPGSRLCRVCGNSHGLIRKYGLN 37

[Close]

BLAST of Lag0037016 vs. ExPASy Swiss-Prot
Match: Q7XYB0 (40S ribosomal protein S29 OS=Griffithsia japonica OX=83288 GN=RPS29 PE=3 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 2.9e-09
Identity = 26/51 (50.98%), Postives = 36/51 (70.59%), Query Frame = 0


Query: 114 MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRNTAENGALVYRGCGHKHAR 165
           MGH N+W SHP+ YG GSR+C++CGN HGLIR  + N   + R C  ++A+
Sbjct: 1   MGHQNIWYSHPRKYGKGSRSCKICGNKHGLIRKYSMN---ICRQCFREYAK 48

[Close]

BLAST of Lag0037016 vs. ExPASy Swiss-Prot
Match: Q4PM47 (40S ribosomal protein S29 OS=Ixodes scapularis OX=6945 GN=RpS29 PE=3 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 4.9e-09
Identity = 28/50 (56.00%), Postives = 34/50 (68.00%), Query Frame = 0


Query: 114 MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRNTAENGALVYRGCGHKHA 164
           MGH N+W SHP+ YGPGSR CRVC N HGLIR   + G  + R C  ++A
Sbjct: 1   MGHENIWYSHPRKYGPGSRYCRVCANHHGLIR---KYGLNICRRCFRQYA 47

[Close]

BLAST of Lag0037016 vs. ExPASy Swiss-Prot
Match: Q6F473 (40S ribosomal protein S29 OS=Plutella xylostella OX=51655 GN=RpS29 PE=3 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 4.2e-08
Identity = 26/50 (52.00%), Postives = 34/50 (68.00%), Query Frame = 0


Query: 114 MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRNTAENGALVYRGCGHKHA 164
           MGH+N+W SHP+ YG GSR+CR C N HGLIR   + G  + R C  ++A
Sbjct: 1   MGHANIWYSHPRKYGQGSRSCRACSNRHGLIR---KYGLNICRQCFREYA 47

[Close]

BLAST of Lag0037016 vs. ExPASy TrEMBL
Match: A0A6J1FL48 (uncharacterized protein LOC111446740 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111446740 PE=4 SV=1)

HSP 1 Score: 180.6 bits (457), Expect = 1.0e-41
Identity = 97/126 (76.98%), Postives = 105/126 (83.33%), Query Frame = 0


Query: 200 MKLCRFSVMPFVLHTSLLVLFFSSNINASLSSVADMAPNIRHVESNEYLSATPSNRKLNL 259
           MKLCR  VM FVLHTSLL+LFFSS+I +S SS  DM PN  HV SNE LSATPSNRKL L
Sbjct: 1   MKLCRLLVMLFVLHTSLLLLFFSSSICSSSSS--DMTPNQPHVVSNECLSATPSNRKLKL 60

Query: 260 LDSEHSNLRRKNVHVGNVNLYDYSPIDPVPSSKRSLKHGPIEHGSPLIPHMPNPSPPDQP 319
            D++ S+  RKNV V NVNLYDYSPIDPVPSSKRS+KHGPIEH SPLIP+MPNPSPPDQP
Sbjct: 61  EDNDDSSPGRKNVRVDNVNLYDYSPIDPVPSSKRSIKHGPIEHRSPLIPYMPNPSPPDQP 120

Query: 320 QRGGFV 326
           Q GGFV
Sbjct: 121 QPGGFV 124

[Close]

BLAST of Lag0037016 vs. ExPASy TrEMBL
Match: A0A6J1IVH6 (uncharacterized protein LOC111480980 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111480980 PE=4 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 1.1e-40
Identity = 95/126 (75.40%), Postives = 104/126 (82.54%), Query Frame = 0


Query: 200 MKLCRFSVMPFVLHTSLLVLFFSSNINASLSSVADMAPNIRHVESNEYLSATPSNRKLNL 259
           MKLCR  VM FVLHTSLL+ FFSS+I +S SS  DM PN  HV SNE LSATPSN+KL L
Sbjct: 1   MKLCRLLVMLFVLHTSLLLPFFSSSICSSSSS--DMTPNQPHVVSNECLSATPSNKKLKL 60

Query: 260 LDSEHSNLRRKNVHVGNVNLYDYSPIDPVPSSKRSLKHGPIEHGSPLIPHMPNPSPPDQP 319
            D++ S+  RKNV V NVNLYDYSPIDPVPSSKRS+KHGPIEH SPLIP+MPNPSPPDQP
Sbjct: 61  QDNDDSSPGRKNVRVDNVNLYDYSPIDPVPSSKRSIKHGPIEHRSPLIPYMPNPSPPDQP 120

Query: 320 QRGGFV 326
           Q GGFV
Sbjct: 121 QPGGFV 124

[Close]

BLAST of Lag0037016 vs. ExPASy TrEMBL
Match: A0A1S3BUB3 (uncharacterized protein LOC103493594 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103493594 PE=4 SV=1)

HSP 1 Score: 176.0 bits (445), Expect = 2.5e-40
Identity = 91/117 (77.78%), Postives = 98/117 (83.76%), Query Frame = 0


Query: 209 PFVLHTSLLVLFFSSNINASLSSVADMAPNIRHVESNEYLSATPSNRKLNLLDSEHSNLR 268
           PF+LHTSLL+LFF S  NA  SS ++MA N  HVESNEYL ATPSNRK+ L DSE  N  
Sbjct: 4   PFLLHTSLLLLFFFSINNA--SSTSEMAANNLHVESNEYLFATPSNRKMKLQDSEQRNPT 63

Query: 269 RKNVHVGNVNLYDYSPIDPVPSSKRSLKHGPIEHGSPLIPHMPNPSPPDQPQRGGFV 326
           RKNV VG+VNLYDY PIDPVPSSKRS+KHGPIEHGSPLIPHMPNPSPPDQPQ GGFV
Sbjct: 64  RKNVRVGDVNLYDYHPIDPVPSSKRSIKHGPIEHGSPLIPHMPNPSPPDQPQPGGFV 118

[Close]

BLAST of Lag0037016 vs. ExPASy TrEMBL
Match: A0A0A0L0G3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G642390 PE=4 SV=1)

HSP 1 Score: 174.9 bits (442), Expect = 5.6e-40
Identity = 90/117 (76.92%), Postives = 98/117 (83.76%), Query Frame = 0


Query: 209 PFVLHTSLLVLFFSSNINASLSSVADMAPNIRHVESNEYLSATPSNRKLNLLDSEHSNLR 268
           PF+LH SLL+LFF S  NA  SS ++MAPN  HVESNEYL ATPSNRK+ L D E SN  
Sbjct: 4   PFLLHISLLLLFFFSINNA--SSTSEMAPNHLHVESNEYLFATPSNRKMKLQDREQSNPT 63

Query: 269 RKNVHVGNVNLYDYSPIDPVPSSKRSLKHGPIEHGSPLIPHMPNPSPPDQPQRGGFV 326
           RKNV VG+VNLYDY PIDPVPSSKRS+KHGPIEHGSPLIPHMP+PSPPDQPQ GGFV
Sbjct: 64  RKNVRVGDVNLYDYHPIDPVPSSKRSIKHGPIEHGSPLIPHMPSPSPPDQPQPGGFV 118

[Close]

BLAST of Lag0037016 vs. ExPASy TrEMBL
Match: A0A6J1FTP5 (uncharacterized protein LOC111446740 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111446740 PE=4 SV=1)

HSP 1 Score: 174.9 bits (442), Expect = 5.6e-40
Identity = 97/131 (74.05%), Postives = 106/131 (80.92%), Query Frame = 0


Query: 200 MKLCRFSVMPFVLHTSLLVLFFSSNINASLSSVADMAPNIRHVESNEYLSATPSNRKL-- 259
           MKLCR  VM FVLHTSLL+LFFSS+I +S SS  DM PN  HV SNE LSATPSNRKL  
Sbjct: 1   MKLCRLLVMLFVLHTSLLLLFFSSSICSSSSS--DMTPNQPHVVSNECLSATPSNRKLKV 60

Query: 260 ---NLLDSEHSNLRRKNVHVGNVNLYDYSPIDPVPSSKRSLKHGPIEHGSPLIPHMPNPS 319
              +L D++ S+  RKNV V NVNLYDYSPIDPVPSSKRS+KHGPIEH SPLIP+MPNPS
Sbjct: 61  CTCSLEDNDDSSPGRKNVRVDNVNLYDYSPIDPVPSSKRSIKHGPIEHRSPLIPYMPNPS 120

Query: 320 PPDQPQRGGFV 326
           PPDQPQ GGFV
Sbjct: 121 PPDQPQPGGFV 129

[Close]

BLAST of Lag0037016 vs. TAIR 10
Match: AT3G43980.1 (Ribosomal protein S14p/S29e family protein )

HSP 1 Score: 71.6 bits (174), Expect = 1.3e-12
Identity = 30/37 (81.08%), Postives = 30/37 (81.08%), Query Frame = 0


Query: 114 MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRNTAEN 151
           MGHSNVWNSHPK YGPGSR CRVCGN HGLIR    N
Sbjct: 1   MGHSNVWNSHPKKYGPGSRLCRVCGNSHGLIRKYGLN 37

[Close]

BLAST of Lag0037016 vs. TAIR 10
Match: AT3G44010.1 (Ribosomal protein S14p/S29e family protein )

HSP 1 Score: 71.6 bits (174), Expect = 1.3e-12
Identity = 30/37 (81.08%), Postives = 30/37 (81.08%), Query Frame = 0


Query: 114 MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRNTAEN 151
           MGHSNVWNSHPK YGPGSR CRVCGN HGLIR    N
Sbjct: 1   MGHSNVWNSHPKKYGPGSRLCRVCGNSHGLIRKYGLN 37

[Close]

BLAST of Lag0037016 vs. TAIR 10
Match: AT4G33865.1 (Ribosomal protein S14p/S29e family protein )

HSP 1 Score: 71.6 bits (174), Expect = 1.3e-12
Identity = 30/37 (81.08%), Postives = 30/37 (81.08%), Query Frame = 0


Query: 114 MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRNTAEN 151
           MGHSNVWNSHPK YGPGSR CRVCGN HGLIR    N
Sbjct: 1   MGHSNVWNSHPKKYGPGSRLCRVCGNSHGLIRKYGLN 37

[Close]

BLAST of Lag0037016 vs. TAIR 10
Match: AT5G43150.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 70.9 bits (172), Expect = 2.2e-12
Identity = 29/54 (53.70%), Postives = 35/54 (64.81%), Query Frame = 0


Query: 2  EWWSKMTSPLRRFTTNVASRFGFRKRGLLKLGRDVKACEYEDVHVMWEMLKKNE 56
          EWW+ M  P RR       R GFR  GLL+L  DV +CEYED+H+MW +L KNE
Sbjct: 8  EWWNTMAFPTRRIWNRFTVRVGFRHSGLLRLEHDVSSCEYEDIHIMWNLLHKNE 61

[Close]

BLAST of Lag0037016 vs. TAIR 10
Match: AT5G01075.1 (Glycosyl hydrolase family 35 protein )

HSP 1 Score: 54.7 bits (130), Expect = 1.6e-07
Identity = 28/54 (51.85%), Postives = 36/54 (66.67%), Query Frame = 0


Query: 277 VNLYDYS-PIDPVPSSKRSLKHGPIEHGSPLIPHMPNP------SPPDQPQRGG 324
           V L DY+ P+DP P++K S+K GPIEHG+PL P++P P       PP Q Q GG
Sbjct: 28  VGLEDYNFPVDPTPTTKASIKPGPIEHGTPLNPYIPKPPSPSSSPPPQQSQDGG 81

The following BLAST results are available for this feature:

BLAST of Lag0037016 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023525817.1	1.6e-41	76.98	uncharacterized protein LOC111789323 isoform X2 [Cucurbita pepo subsp. pepo]	[more]
XP_022941446.1	2.1e-41	76.98	uncharacterized protein LOC111446740 isoform X2 [Cucurbita moschata] >KAG7037771...	[more]
XP_022981997.1	2.3e-40	75.40	uncharacterized protein LOC111480980 isoform X2 [Cucurbita maxima]	[more]
XP_008452634.1	5.2e-40	77.78	PREDICTED: uncharacterized protein LOC103493594 isoform X1 [Cucumis melo]	[more]
XP_023525816.1	8.9e-40	74.05	uncharacterized protein LOC111789323 isoform X1 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Lag0037016 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q5I7K3	1.4e-11	64.71	40S ribosomal protein S29 OS=Triticum aestivum OX=4565 GN=RPS29 PE=1 SV=1	[more]
Q680P8	1.8e-11	81.08	40S ribosomal protein S29 OS=Arabidopsis thaliana OX=3702 GN=RPS29A PE=3 SV=2	[more]
Q7XYB0	2.9e-09	50.98	40S ribosomal protein S29 OS=Griffithsia japonica OX=83288 GN=RPS29 PE=3 SV=1	[more]
Q4PM47	4.9e-09	56.00	40S ribosomal protein S29 OS=Ixodes scapularis OX=6945 GN=RpS29 PE=3 SV=1	[more]
Q6F473	4.2e-08	52.00	40S ribosomal protein S29 OS=Plutella xylostella OX=51655 GN=RpS29 PE=3 SV=1	[more]

BLAST of Lag0037016 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FL48	1.0e-41	76.98	uncharacterized protein LOC111446740 isoform X2 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1IVH6	1.1e-40	75.40	uncharacterized protein LOC111480980 isoform X2 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A1S3BUB3	2.5e-40	77.78	uncharacterized protein LOC103493594 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A0A0L0G3	5.6e-40	76.92	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G642390 PE=4 SV=1	[more]
A0A6J1FTP5	5.6e-40	74.05	uncharacterized protein LOC111446740 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]

BLAST of Lag0037016 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G43980.1	1.3e-12	81.08	Ribosomal protein S14p/S29e family protein	[more]
AT3G44010.1	1.3e-12	81.08	Ribosomal protein S14p/S29e family protein	[more]
AT4G33865.1	1.3e-12	81.08	Ribosomal protein S14p/S29e family protein	[more]
AT5G43150.1	2.2e-12	53.70	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT5G01075.1	1.6e-07	51.85	Glycosyl hydrolase family 35 protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR043140	Ribosomal protein S14/S29	GENE3D	4.10.830.10	30s Ribosomal Protein S14; Chain N	coord: 114..149 e-value: 8.7E-15 score: 56.3
IPR001209	Ribosomal protein S14	PFAM	PF00253	Ribosomal_S14	coord: 120..145 e-value: 4.7E-6 score: 26.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 290..325
None	No IPR available	PANTHER	PTHR37249:SF3	BNAANNG14020D PROTEIN	coord: 200..324
None	No IPR available	PANTHER	PTHR37249	OS03G0206201 PROTEIN	coord: 200..324

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0037016.1	Lag0037016.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003735	structural constituent of ribosome