Lag0035737 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0035737
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionPectinesterase inhibitor-like
Locationchr3: 29186469 .. 29186828 (-)
RNA-Seq ExpressionLag0035737
SyntenyLag0035737
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGGAGACGGGGAGGGAGGAGTCCTCGATTTCTTTCTCACTGGTCTTTCTCGCCGTTGCAATCTTCGCCGAACAAGCTCAGGGAGCCAACCTCTACGCCAAGGCCGACTACGTGCCACTCTGCCGATCCATCGTGAAAGGCGCCACCGATCCGAAAGTCGCCATGAAGACAACCATCGAAAACCTCATCTTTGAAACAAAACGCACGAGAGAAACAAACGTGAAGCTCGACAAAATGAGCGAGCAGTGGGTCCTCGTGGAAGGGAAACGGTGGTCAGTGAGCAGTAGGTCCTCCAGATCTAGGCTAGCGACAATGGATCTGGGCGAACGACGGTCAGGTCTGGGCGAACGGTGGTAA

mRNA sequence

ATGAAGGAGACGGGGAGGGAGGAGTCCTCGATTTCTTTCTCACTGGTCTTTCTCGCCGTTGCAATCTTCGCCGAACAAGCTCAGGGAGCCAACCTCTACGCCAAGGCCGACTACGTGCCACTCTGCCGATCCATCGTGAAAGGCGCCACCGATCCGAAAGTCGCCATGAAGACAACCATCGAAAACCTCATCTTTGAAACAAAACGCACGAGAGAAACAAACGTGAAGCTCGACAAAATGAGCGAGCAGTGGGTCCTCGTGGAAGGGAAACGGTGGTCAGTGAGCAGTAGGTCCTCCAGATCTAGGCTAGCGACAATGGATCTGGGCGAACGACGGTCAGGTCTGGGCGAACGGTGGTAA

Coding sequence (CDS)

ATGAAGGAGACGGGGAGGGAGGAGTCCTCGATTTCTTTCTCACTGGTCTTTCTCGCCGTTGCAATCTTCGCCGAACAAGCTCAGGGAGCCAACCTCTACGCCAAGGCCGACTACGTGCCACTCTGCCGATCCATCGTGAAAGGCGCCACCGATCCGAAAGTCGCCATGAAGACAACCATCGAAAACCTCATCTTTGAAACAAAACGCACGAGAGAAACAAACGTGAAGCTCGACAAAATGAGCGAGCAGTGGGTCCTCGTGGAAGGGAAACGGTGGTCAGTGAGCAGTAGGTCCTCCAGATCTAGGCTAGCGACAATGGATCTGGGCGAACGACGGTCAGGTCTGGGCGAACGGTGGTAA

Protein sequence

MKETGREESSISFSLVFLAVAIFAEQAQGANLYAKADYVPLCRSIVKGATDPKVAMKTTIENLIFETKRTRETNVKLDKMSEQWVLVEGKRWSVSSRSSRSRLATMDLGERRSGLGERW
Homology
BLAST of Lag0035737 vs. NCBI nr
Match: XP_008446181.1 (PREDICTED: uncharacterized protein LOC103488985 [Cucumis melo] >KAA0034294.1 pectinesterase inhibitor-like [Cucumis melo var. makuwa] >TYK15625.1 pectinesterase inhibitor-like [Cucumis melo var. makuwa])

HSP 1 Score: 79.3 bits (194), Expect = 2.4e-11
Identity = 41/70 (58.57%), Postives = 55/70 (78.57%), Query Frame = 0

Query: 7  EESSISFSLVFLAVA-----IFAEQAQGANLYAKADYVPLCRSIVKGATDPKVAMKTTIE 66
          ++ S+SFS VFL VA     +FA QAQG ++ A+A+YVPLCRS+VKGA+DP VA+KT I+
Sbjct: 3  KKQSVSFSPVFLVVATAVVVLFAGQAQGVDICAQAEYVPLCRSVVKGASDPTVAIKTAIQ 62

Query: 67 NLIFETKRTR 72
          +L FETKR +
Sbjct: 63 HLSFETKRAK 72

BLAST of Lag0035737 vs. NCBI nr
Match: XP_038891721.1 (uncharacterized protein LOC120081119 [Benincasa hispida])

HSP 1 Score: 78.6 bits (192), Expect = 4.1e-11
Identity = 41/74 (55.41%), Postives = 54/74 (72.97%), Query Frame = 0

Query: 7  EESSISFSLVFLA---VAIFAEQAQGANLYAKADYVPLCRSIVKGATDPKVAMKTTIENL 66
          E   +SFSLVFLA   V +FA QAQG ++  +A YVPLCRS+VKG +DP VA+   IE+L
Sbjct: 3  ENRLVSFSLVFLAAATVVLFAGQAQGIDICGEAGYVPLCRSVVKGVSDPAVAIVKAIEHL 62

Query: 67 IFETKRTRETNVKL 78
          +FETKR +  +VK+
Sbjct: 63 LFETKRAKAASVKM 76

BLAST of Lag0035737 vs. NCBI nr
Match: XP_004135484.1 (pectinesterase inhibitor 12 [Cucumis sativus] >KGN51780.1 hypothetical protein Csa_009399 [Cucumis sativus])

HSP 1 Score: 78.6 bits (192), Expect = 4.1e-11
Identity = 39/74 (52.70%), Postives = 56/74 (75.68%), Query Frame = 0

Query: 7  EESSISFSLVFLAVAIFAEQAQGANLYAKADYVPLCRSIVKGATDPKVAMKTTIENLIFE 66
          E+  +SFS+VFL VA+F  QAQG+ L  +A +  LCRS VKGA+DP  A+K TIE+LIFE
Sbjct: 3  EKHLVSFSMVFLLVAVFISQAQGSALCDEAAFPALCRSTVKGASDPTSALKITIEHLIFE 62

Query: 67 TKRTRETNVKLDKM 81
          TKR +++++K+  +
Sbjct: 63 TKRAKDSSLKIGSL 76

BLAST of Lag0035737 vs. NCBI nr
Match: XP_038893230.1 (pectinesterase inhibitor-like [Benincasa hispida])

HSP 1 Score: 74.3 bits (181), Expect = 7.8e-10
Identity = 37/68 (54.41%), Postives = 50/68 (73.53%), Query Frame = 0

Query: 7  EESSISFSLVFLAVAIFAEQAQGANLYAKADYVPLCRSIVKGATDPKVAMKTTIENLIFE 66
          E+  +SFS VFLAVA+FA QA G+ +  K+DY  LCRS VKGA+DP+ A+K  IE+LI E
Sbjct: 3  EKHLVSFSFVFLAVAVFAGQAHGSTICDKSDYPALCRSAVKGASDPESALKAAIEHLISE 62

Query: 67 TKRTRETN 75
          T   +E++
Sbjct: 63 TNHAKESS 70

BLAST of Lag0035737 vs. NCBI nr
Match: XP_004135485.1 (uncharacterized protein LOC101212847 [Cucumis sativus])

HSP 1 Score: 73.6 bits (179), Expect = 1.3e-09
Identity = 38/74 (51.35%), Postives = 53/74 (71.62%), Query Frame = 0

Query: 11 ISFSLVFLAVA-------IFAEQAQGANLYAKADYVPLCRSIVKGATDPKVAMKTTIENL 70
          +SFS VFL VA       +FA QAQG ++   ++Y+PLCRS+VKGA+DP  A+KT I +L
Sbjct: 7  VSFSPVFLVVAAAAAVVVLFAGQAQGVDICVHSEYIPLCRSVVKGASDPTAAIKTAIGHL 66

Query: 71 IFETKRTRETNVKL 78
          +FETKR + ++V L
Sbjct: 67 LFETKRAKTSSVVL 80

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_008446181.12.4e-1158.57PREDICTED: uncharacterized protein LOC103488985 [Cucumis melo] >KAA0034294.1 pec... [more]
XP_038891721.14.1e-1155.41uncharacterized protein LOC120081119 [Benincasa hispida][more]
XP_004135484.14.1e-1152.70pectinesterase inhibitor 12 [Cucumis sativus] >KGN51780.1 hypothetical protein C... [more]
XP_038893230.17.8e-1054.41pectinesterase inhibitor-like [Benincasa hispida][more]
XP_004135485.11.3e-0951.35uncharacterized protein LOC101212847 [Cucumis sativus][more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0035737.1Lag0035737.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0030599 pectinesterase activity
molecular_function GO:0046910 pectinesterase inhibitor activity