Lag0035709 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGTGTGGCTTTTCTCAATGATACAACACTGACAAATTTCATCAACGATACAAAGATGTTTGACGATTGCATCAAGGAGAGCTTTAAGAAGCTTGACGTGGACGGGGATGGCTTCCTGAATGCCGATGAACTCGGTGTCGAGTTTTGCAATCAACCATTAGATCCGATGAAAGATATCTATGAAGTTGTTTGTCATAAGTTTGAAGTGGACAAAAATGGTGGAATTGATGTAAAGGGGTTTATGTCAATAATAAGGGACATTCTACTTGCCATGGCTCAAGGGATTGGAAACTTGCCAATCCAAGTTGCACTTCAAGAAGATAGTTTTCTCACCAAGGCTGTTGAGCATGAAAAGAAGAAGAAAGCAGAAAAATAG ATGAGTGTGGCTTTTCTCAATGATACAACACTGACAAATTTCATCAACGATACAAAGATGTTTGACGATTGCATCAAGGAGAGCTTTAAGAAGCTTGACGTGGACGGGGATGGCTTCCTGAATGCCGATGAACTCGGTGTCGAGTTTTGCAATCAACCATTAGATCCGATGAAAGATATCTATGAAGTTGTTTGTCATAAGTTTGAAGTGGACAAAAATGGTGGAATTGATGTAAAGGGGTTTATGTCAATAATAAGGGACATTCTACTTGCCATGGCTCAAGGGATTGGAAACTTGCCAATCCAAGTTGCACTTCAAGAAGATAGTTTTCTCACCAAGGCTGTTGAGCATGAAAAGAAGAAGAAAGCAGAAAAATAG ATGAGTGTGGCTTTTCTCAATGATACAACACTGACAAATTTCATCAACGATACAAAGATGTTTGACGATTGCATCAAGGAGAGCTTTAAGAAGCTTGACGTGGACGGGGATGGCTTCCTGAATGCCGATGAACTCGGTGTCGAGTTTTGCAATCAACCATTAGATCCGATGAAAGATATCTATGAAGTTGTTTGTCATAAGTTTGAAGTGGACAAAAATGGTGGAATTGATGTAAAGGGGTTTATGTCAATAATAAGGGACATTCTACTTGCCATGGCTCAAGGGATTGGAAACTTGCCAATCCAAGTTGCACTTCAAGAAGATAGTTTTCTCACCAAGGCTGTTGAGCATGAAAAGAAGAAGAAAGCAGAAAAATAG MSVAFLNDTTLTNFINDTKMFDDCIKESFKKLDVDGDGFLNADELGVEFCNQPLDPMKDIYEVVCHKFEVDKNGGIDVKGFMSIIRDILLAMAQGIGNLPIQVALQEDSFLTKAVEHEKKKKAEK Homology
BLAST of Lag0035709 vs. NCBI nr
Match: XP_004142569.1 (uncharacterized protein LOC101222885 [Cucumis sativus] >KGN66803.1 hypothetical protein Csa_006967 [Cucumis sativus]) HSP 1 Score: 179.1 bits (453), Expect = 2.4e-41 Identity = 90/127 (70.87%), Postives = 106/127 (83.46%), Query Frame = 0
BLAST of Lag0035709 vs. NCBI nr
Match: XP_008462771.1 (PREDICTED: uncharacterized protein LOC103501058 [Cucumis melo] >KAA0062591.1 calcium-binding EF hand family protein [Cucumis melo var. makuwa]) HSP 1 Score: 176.4 bits (446), Expect = 1.5e-40 Identity = 91/127 (71.65%), Postives = 104/127 (81.89%), Query Frame = 0
BLAST of Lag0035709 vs. NCBI nr
Match: TYJ95513.1 (calcium-binding EF hand family protein [Cucumis melo var. makuwa]) HSP 1 Score: 174.1 bits (440), Expect = 7.6e-40 Identity = 89/127 (70.08%), Postives = 103/127 (81.10%), Query Frame = 0
BLAST of Lag0035709 vs. NCBI nr
Match: XP_022158640.1 (uncharacterized protein LOC111025096 [Momordica charantia]) HSP 1 Score: 151.0 bits (380), Expect = 6.9e-33 Identity = 74/122 (60.66%), Postives = 96/122 (78.69%), Query Frame = 0
BLAST of Lag0035709 vs. NCBI nr
Match: XP_018805702.1 (uncharacterized protein LOC108979477 [Juglans regia] >KAF5453860.1 hypothetical protein F2P56_023577 [Juglans regia]) HSP 1 Score: 114.8 bits (286), Expect = 5.5e-22 Identity = 57/127 (44.88%), Postives = 86/127 (67.72%), Query Frame = 0
BLAST of Lag0035709 vs. ExPASy Swiss-Prot
Match: Q9BXU9 (Calcium-binding protein 8 OS=Homo sapiens OX=9606 GN=CALN1 PE=1 SV=2) HSP 1 Score: 44.7 bits (104), Expect = 9.1e-04 Identity = 20/63 (31.75%), Postives = 38/63 (60.32%), Query Frame = 0
BLAST of Lag0035709 vs. ExPASy Swiss-Prot
Match: Q9JJG7 (Calcium-binding protein 8 OS=Mus musculus OX=10090 GN=Caln1 PE=2 SV=2) HSP 1 Score: 44.7 bits (104), Expect = 9.1e-04 Identity = 20/63 (31.75%), Postives = 38/63 (60.32%), Query Frame = 0
BLAST of Lag0035709 vs. ExPASy Swiss-Prot
Match: Q06BI3 (Calcium-binding protein 8 OS=Rattus norvegicus OX=10116 GN=Caln1 PE=1 SV=2) HSP 1 Score: 44.7 bits (104), Expect = 9.1e-04 Identity = 20/63 (31.75%), Postives = 38/63 (60.32%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|