Lag0035574 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0035574
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionUnknown protein
Locationchr3: 24390726 .. 24391899 (-)
RNA-Seq ExpressionLag0035574
SyntenyLag0035574
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGACGCCTCTCTTGCAGTTCTTCCTACCATCTCACCCGTCAAGCCAAAGGGAAAATCACCCAAGGCCGCATCTCCTAAAAATCCATTCCCCGAGGTATTAAAAGATATTAATTTTTAGGAACGGATGAAAATCATAAGAAAGAGAGGCTTCCTCAATGAGGAGGGATTCTCTAACAGAGCAGGATCACTGCCAGAGTTCATAAGCAGAGTTATCTTCCAATACAAGTGGCAGGAGTTCTGTACTCACCCTCAAGAGGCTGTTGTGCCTTTAGTTCGTGAATTCTACGCCGACCTGAGGGAGAAGAGTATTAGCATGGCAGTGGAGAGGGGGAAGATGGTCAGTTTCTTCTCAGTTGACATTAACAGGGTGTACAGGATCAAGGCACCCTGAACCCAAGAGGGAATGATGTGATCAGGAACCCTTCAGCCAAGCAAATGAAGGAAGCTCTTAAACTTGTGGCCAACAAGGGGGTTCAGTGGAAAGAATCACCGACGAAAGTGAAGTCTTTAGTGCCAAGCGACCTAAAGCCAGAATTGGCAGTTTGGCTTCAATTCATCAAAACTGTTTGATGCCAACCACCCACGACAACACGATTTCGGTGGATAGAGTGATGTTATTCTATTGCCTTATGAAGGGGTTGGTGATTAATGTGGGGAGCATAATTAGGGATGAGATCTTAGCCTGTGGACGGAAAAGGGCAGACAAGCTTTTCTTCGGCTCACTCATCACCCAACTTTGTTAGAGGGTGAAGATTGTGCCATGCAAGGACGAGACACGCCATTTCTTTAAACCAACCATTAACTTGTCCTTGATAGGAAAGCTCCAGCAAAACAACATCCAGAGGAAGGATAAAGCCTCCACATCATAGGTCACTCCTCAATCAGGGCCGAATATAGCCTCTTCATCCCATCGCACTTCTTTTACAGGGCCTTCACCAACATCGGAAGCCCTAGGCATGGTCCACCTCCAGTTAGATCAAATCAGGGAGAACCTGAAGACTTATTGGACAGATGCAAAGGAGCGGGATGAAGCTATTAGAGAATTCTATCTCTCGATCTCCCCGAGCATTGCTCCAGTCTTTCTTGATTTCCCTCAATCATTGTTGGCCCAAGAAGAAGAGGATTCTAATGAAGAGGAAGATGAAGAGGATGAAGAGAAAGAGAGTTCCTAG

mRNA sequence

ATGGACGCCTCTCTTGCAGTTCTTCCTACCATCTCACCCGTCAAGCCAAAGGGAAAATCACCCAAGGCCGCATCTCCTAAAAATCCATTCCCCGAGGGTGTACAGGATCAAGGCACCCTGAACCCAAGAGGGAATGATGTGATCAGGAACCCTTCAGCCAAGCAAATGAAGGAAGCTCTTAAACTTGTGGCCAACAAGGGGGTTCAGTGGAAAGAATCACCGACGAAAGTGAAGTCTTTAGTGCCAAGCGACCTAAAGCCAGAATTGGCAGTTTGGCTTCAATTCATCAAAACTGTCACTCCTCAATCAGGGCCGAATATAGCCTCTTCATCCCATCGCACTTCTTTTACAGGGCCTTCACCAACATCGGAAGCCCTAGGCATGGTCCACCTCCAGTTAGATCAAATCAGGGAGAACCTGAAGACTTATTGGACAGATGCAAAGGAGCGGGATGAAGCTATTAGAGAATTCTATCTCTCGATCTCCCCGAGCATTGCTCCAGTCTTTCTTGATTTCCCTCAATCATTGTTGGCCCAAGAAGAAGAGGATTCTAATGAAGAGGAAGATGAAGAGGATGAAGAGAAAGAGAGTTCCTAG

Coding sequence (CDS)

ATGGACGCCTCTCTTGCAGTTCTTCCTACCATCTCACCCGTCAAGCCAAAGGGAAAATCACCCAAGGCCGCATCTCCTAAAAATCCATTCCCCGAGGGTGTACAGGATCAAGGCACCCTGAACCCAAGAGGGAATGATGTGATCAGGAACCCTTCAGCCAAGCAAATGAAGGAAGCTCTTAAACTTGTGGCCAACAAGGGGGTTCAGTGGAAAGAATCACCGACGAAAGTGAAGTCTTTAGTGCCAAGCGACCTAAAGCCAGAATTGGCAGTTTGGCTTCAATTCATCAAAACTGTCACTCCTCAATCAGGGCCGAATATAGCCTCTTCATCCCATCGCACTTCTTTTACAGGGCCTTCACCAACATCGGAAGCCCTAGGCATGGTCCACCTCCAGTTAGATCAAATCAGGGAGAACCTGAAGACTTATTGGACAGATGCAAAGGAGCGGGATGAAGCTATTAGAGAATTCTATCTCTCGATCTCCCCGAGCATTGCTCCAGTCTTTCTTGATTTCCCTCAATCATTGTTGGCCCAAGAAGAAGAGGATTCTAATGAAGAGGAAGATGAAGAGGATGAAGAGAAAGAGAGTTCCTAG

Protein sequence

MDASLAVLPTISPVKPKGKSPKAASPKNPFPEGVQDQGTLNPRGNDVIRNPSAKQMKEALKLVANKGVQWKESPTKVKSLVPSDLKPELAVWLQFIKTVTPQSGPNIASSSHRTSFTGPSPTSEALGMVHLQLDQIRENLKTYWTDAKERDEAIREFYLSISPSIAPVFLDFPQSLLAQEEEDSNEEEDEEDEEKESS
Homology
The following BLAST results are available for this feature:
BLAST of Lag0035574 vs.
Match NameE-valueIdentityDescription
BLAST of Lag0035574 vs.
Match NameE-valueIdentityDescription
BLAST of Lag0035574 vs.
Match NameE-valueIdentityDescription
BLAST of Lag0035574 vs.
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 177..197
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 180..198
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 32..48
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 176..198
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..53

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0035574.1Lag0035574.1mRNA