Lag0032643 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGTCTATGCAATGCAGCAAACCAGGTGAAAAGAGCCAGCAACAGAAGCACGACCAACACCAACAGGACCATTGCTTTGGCCACATGTCCGACAAGATCAAAGGCGTCTTCAGAGGCCACCATCATGCCCAGCCTCCTGCGCCCAATGCCAACTGCGGTCAGTGCAAGCCAGGCCCTAAGAAGAGCGAACACCACAAGAATAAAGAAGGGGGTTTCTTGAACAAGATCAAGGATGCCTTCTCCGACCACAGCGACAGCAGCGACAGCGACGATGACGGTCACAAAGCCCACCACAAAAGGAAGGCAAGTGTTTTGTTTTTCTTCCTCTCTCAAGATTTGTTCAAACATTTCTCATATGGTTTTTAG ATGGCGTCTATGCAATGCAGCAAACCAGGTGAAAAGAGCCAGCAACAGAAGCACGACCAACACCAACAGGACCATTGCTTTGGCCACATGTCCGACAAGATCAAAGGCGTCTTCAGAGGCCACCATCATGCCCAGCCTCCTGCGCCCAATGCCAACTGCGGTCAGTGCAAGCCAGGCCCTAAGAAGAGCGAACACCACAAGAATAAAGAAGGGGGTTTCTTGAACAAGATCAAGGATGCCTTCTCCGACCACAGCGACAGCAGCGACAGCGACGATGACGGTCACAAAGCCCACCACAAAAGGAAGGCAAGTGTTTTGTTTTTCTTCCTCTCTCAAGATTTGTTCAAACATTTCTCATATGGTTTTTAG ATGGCGTCTATGCAATGCAGCAAACCAGGTGAAAAGAGCCAGCAACAGAAGCACGACCAACACCAACAGGACCATTGCTTTGGCCACATGTCCGACAAGATCAAAGGCGTCTTCAGAGGCCACCATCATGCCCAGCCTCCTGCGCCCAATGCCAACTGCGGTCAGTGCAAGCCAGGCCCTAAGAAGAGCGAACACCACAAGAATAAAGAAGGGGGTTTCTTGAACAAGATCAAGGATGCCTTCTCCGACCACAGCGACAGCAGCGACAGCGACGATGACGGTCACAAAGCCCACCACAAAAGGAAGGCAAGTGTTTTGTTTTTCTTCCTCTCTCAAGATTTGTTCAAACATTTCTCATATGGTTTTTAG MASMQCSKPGEKSQQQKHDQHQQDHCFGHMSDKIKGVFRGHHHAQPPAPNANCGQCKPGPKKSEHHKNKEGGFLNKIKDAFSDHSDSSDSDDDGHKAHHKRKASVLFFFLSQDLFKHFSYGF Homology
BLAST of Lag0032643 vs. NCBI nr
Match: XP_038875375.1 (uncharacterized protein LOC120067846 [Benincasa hispida]) HSP 1 Score: 119.0 bits (297), Expect = 2.8e-23 Identity = 71/112 (63.39%), Postives = 82/112 (73.21%), Query Frame = 0
BLAST of Lag0032643 vs. NCBI nr
Match: XP_022146004.1 (uncharacterized protein LOC111015315 [Momordica charantia]) HSP 1 Score: 111.7 bits (278), Expect = 4.5e-21 Identity = 70/114 (61.40%), Postives = 80/114 (70.18%), Query Frame = 0
BLAST of Lag0032643 vs. NCBI nr
Match: XP_008437383.1 (PREDICTED: uncharacterized protein LOC103482815 [Cucumis melo]) HSP 1 Score: 98.2 bits (243), Expect = 5.2e-17 Identity = 64/116 (55.17%), Postives = 76/116 (65.52%), Query Frame = 0
BLAST of Lag0032643 vs. NCBI nr
Match: XP_022958513.1 (glycine-rich cell wall structural protein 1-like [Cucurbita moschata]) HSP 1 Score: 74.3 bits (181), Expect = 8.0e-10 Identity = 39/58 (67.24%), Postives = 43/58 (74.14%), Query Frame = 0
BLAST of Lag0032643 vs. NCBI nr
Match: KAA0042689.1 (uncharacterized protein E6C27_scaffold44G001870 [Cucumis melo var. makuwa] >TYK06092.1 uncharacterized protein E5676_scaffold376G001930 [Cucumis melo var. makuwa]) HSP 1 Score: 60.8 bits (146), Expect = 9.1e-06 Identity = 43/84 (51.19%), Postives = 49/84 (58.33%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
|