Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTTCATCTTTCCGAGCCAAATCTCGACAATCCGCCGTATCCTCGCCGTCGCGAGGCTACATTTCTTCTCCGTCGGCTTTCGCTTCCTCCAGTACGACTTTCTTGTCTCGACCGTCGTCTCCCAAGCTTGCGAGGATGTATGGAAAATCTTCGTGTTCGTCTTCGTCATCATCGGCGGCGTCGGCGTCTGTGAGGTTTCAGACTGATCGGAGGTCGGCATCGTCCGGCAGTACGATTTCGGTTCAGAAGAGAAGCGACAATAACACGAATGCGGTGTCGTCGAACAAGAAGAAAGCGTGCATGTGTTCTCCGACGAATCATCCAGGTTCGTTCAGGTGTTCTCTCTATTAA
mRNA sequence
ATGGCTTCATCTTTCCGAGCCAAATCTCGACAATCCGCCGTATCCTCGCCGTCGCGAGGCTACATTTCTTCTCCGTCGGCTTTCGCTTCCTCCAGTACGACTTTCTTGTCTCGACCGTCGTCTCCCAAGCTTGCGAGGATGTATGGAAAATCTTCGTGTTCGTCTTCGTCATCATCGGCGGCGTCGGCGTCTGTGAGGTTTCAGACTGATCGGAGGTCGGCATCGTCCGGCAGTACGATTTCGGTTCAGAAGAGAAGCGACAATAACACGAATGCGGTGTCGTCGAACAAGAAGAAAGCGTGCATGTGTTCTCCGACGAATCATCCAGGTTCGTTCAGGTGTTCTCTCTATTAA
Coding sequence (CDS)
ATGGCTTCATCTTTCCGAGCCAAATCTCGACAATCCGCCGTATCCTCGCCGTCGCGAGGCTACATTTCTTCTCCGTCGGCTTTCGCTTCCTCCAGTACGACTTTCTTGTCTCGACCGTCGTCTCCCAAGCTTGCGAGGATGTATGGAAAATCTTCGTGTTCGTCTTCGTCATCATCGGCGGCGTCGGCGTCTGTGAGGTTTCAGACTGATCGGAGGTCGGCATCGTCCGGCAGTACGATTTCGGTTCAGAAGAGAAGCGACAATAACACGAATGCGGTGTCGTCGAACAAGAAGAAAGCGTGCATGTGTTCTCCGACGAATCATCCAGGTTCGTTCAGGTGTTCTCTCTATTAA
Protein sequence
MASSFRAKSRQSAVSSPSRGYISSPSAFASSSTTFLSRPSSPKLARMYGKSSCSSSSSSAASASVRFQTDRRSASSGSTISVQKRSDNNTNAVSSNKKKACMCSPTNHPGSFRCSLY
Homology
BLAST of Lag0031263 vs. NCBI nr
Match:
XP_038877738.1 (uncharacterized protein LOC120069962 [Benincasa hispida])
HSP 1 Score: 131.3 bits (329), Expect = 5.3e-27
Identity = 84/118 (71.19%), Postives = 91/118 (77.12%), Query Frame = 0
Query: 1 MASSFRAKSRQSAVSSPSRGYISSPSAFASSSTTFLSRPSSPKLARMYGKSSCSS-SSSS 60
MA SF AKSR+SA S PSRGYISSPSAFASSST F+SRPSS MY KS SS S SS
Sbjct: 1 MAFSFGAKSRKSASSLPSRGYISSPSAFASSSTAFMSRPSSTAPVAMYRKSPSSSLSPSS 60
Query: 61 AASASVRFQTDRRSASSGSTISVQKRSDNNTNAVSSNKKKACMCSPTNHPGSFRCSLY 118
+A +SVRFQ D+RSAS +ISVQK D N NAV SNKKK CMCSPT HPGSFRCSL+
Sbjct: 61 SAVSSVRFQIDQRSASPSRSISVQKNRDRNANAVPSNKKKTCMCSPTKHPGSFRCSLH 118
BLAST of Lag0031263 vs. NCBI nr
Match:
XP_008454197.1 (PREDICTED: uncharacterized protein LOC103494676 [Cucumis melo] >KAA0044464.1 serine-rich protein-like protein [Cucumis melo var. makuwa] >TYK29591.1 serine-rich protein-like protein [Cucumis melo var. makuwa])
HSP 1 Score: 103.6 bits (257), Expect = 1.2e-18
Identity = 69/117 (58.97%), Postives = 83/117 (70.94%), Query Frame = 0
Query: 1 MASSFRAKSRQSAVSSPSRGYISSPSAFASSSTTFLSRPSSPKLARMYGKSSCSSSSSSA 60
MAS A+S QSA S SR Y S SAFASSST F SRPSS K M KSS ++ +++
Sbjct: 1 MASPSGAESPQSATSLRSRCYFISHSAFASSSTAFTSRPSSTKPVAMSRKSSPAAVLTAS 60
Query: 61 ASASVRFQTDRRSASSGSTISVQKRSDNNTNAVSSNKKKACMCSPTNHPGSFRCSLY 118
+S+RFQ D+RSAS +ISVQK D+N NAV SNK+K C+CSPT HPGSFRCSL+
Sbjct: 61 TVSSLRFQIDQRSASPSRSISVQKNRDSNANAVPSNKRKVCVCSPTKHPGSFRCSLH 117
BLAST of Lag0031263 vs. NCBI nr
Match:
XP_004152334.1 (uncharacterized protein LOC101207294 [Cucumis sativus] >KGN52922.1 hypothetical protein Csa_015077 [Cucumis sativus])
HSP 1 Score: 101.7 bits (252), Expect = 4.5e-18
Identity = 73/119 (61.34%), Postives = 81/119 (68.07%), Query Frame = 0
Query: 1 MASSFRAKSRQSAVSSPSRGYISSPSAFASSSTTFLSRPSSPKLARMYGKSSCSSSSSSA 60
MAS A+SRQSA S SR YI+S SAFASSST F SRPSS K M KS
Sbjct: 1 MASPSGAESRQSATSLRSRCYITSHSAFASSSTAFTSRPSSTKPVTMSRKS--------- 60
Query: 61 ASASVRFQTDRRSAS-SGSTISVQKRSDNNTNAVSSNKKKA-CMCSPTNHPGSFRCSLY 118
S+RFQTD+RSAS S ++SVQK D+N NAV SNKKK CMCSPT HPGSFRCSL+
Sbjct: 61 ---SLRFQTDQRSASPSRRSVSVQKNRDSNANAVPSNKKKVMCMCSPTKHPGSFRCSLH 107
BLAST of Lag0031263 vs. NCBI nr
Match:
XP_022956255.1 (uncharacterized protein LOC111458006 [Cucurbita moschata])
HSP 1 Score: 99.8 bits (247), Expect = 1.7e-17
Identity = 74/127 (58.27%), Postives = 84/127 (66.14%), Query Frame = 0
Query: 1 MASSFRAKSRQ--------SAVSSPSRGYISSPSAFASSSTTFLSRPSSPK--LARMYGK 60
MAS +KSRQ S++ S SR ISSPS FASSST FLSRP + + M GK
Sbjct: 1 MASLIGSKSRQISSPSPFASSIGSKSR-QISSPSPFASSSTAFLSRPLEGRFLVEAMCGK 60
Query: 61 SSCSSSSSSAASASVRFQTDRRSASSGSTISVQKRSDNNTNAVSSNKKKACMCSPTNHPG 118
+CSSS ASVRFQ D R AS G +ISVQK + N NAVSSNKKK CMCSP+ HPG
Sbjct: 61 YACSSS-----EASVRFQIDGRPASPGRSISVQKNRERNANAVSSNKKKWCMCSPSTHPG 120
BLAST of Lag0031263 vs. NCBI nr
Match:
XP_022153483.1 (uncharacterized protein LOC111020980 [Momordica charantia])
HSP 1 Score: 99.8 bits (247), Expect = 1.7e-17
Identity = 80/125 (64.00%), Postives = 90/125 (72.00%), Query Frame = 0
Query: 1 MASSFRAKSRQSAVSSPSRGYI-SSPSAFASSSTTFLS-----RPSSPKLARMYGKSSCS 60
MASS +SR+SA S GY SSPS FASSS+TF + R SSP M GKSS S
Sbjct: 1 MASSSGVESRRSA----SGGYYRSSPSPFASSSSTFSARSSTFRSSSPNRVAMNGKSSSS 60
Query: 61 -SSSSSAASASVRFQTDRRSASS-GSTISVQKRSDNNTNAVSSNKKKACMCSPTNHPGSF 118
SSSSSAA+ASVRFQ DR S++S G +ISVQK + N NAVSSNKKK CMCSPT HPGSF
Sbjct: 61 LSSSSSAAAASVRFQIDRGSSTSPGRSISVQKARE-NANAVSSNKKKVCMCSPTTHPGSF 120
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_038877738.1 | 5.3e-27 | 71.19 | uncharacterized protein LOC120069962 [Benincasa hispida] | [more] |
XP_008454197.1 | 1.2e-18 | 58.97 | PREDICTED: uncharacterized protein LOC103494676 [Cucumis melo] >KAA0044464.1 ser... | [more] |
XP_004152334.1 | 4.5e-18 | 61.34 | uncharacterized protein LOC101207294 [Cucumis sativus] >KGN52922.1 hypothetical ... | [more] |
XP_022956255.1 | 1.7e-17 | 58.27 | uncharacterized protein LOC111458006 [Cucurbita moschata] | [more] |
XP_022153483.1 | 1.7e-17 | 64.00 | uncharacterized protein LOC111020980 [Momordica charantia] | [more] |
Match Name | E-value | Identity | Description | |