Lag0029236 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0029236
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Unknown protein
Location	chr8: 36799659 .. 36800961 (-)
RNA-Seq Expression	Lag0029236
Synteny	Lag0029236

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATGTGTACAGAGATCAAATGTCCTCCTGTTACTTCCATCCCAAAGAAATAGTAGTGGGTGTCTGCGCTTTGTGCTTAAACGAGAGGCTTCTTATCCTGGCGTCCAGACGAGGCCGCCACCACTCTTCAGCCCGAAGCTGCCGGAAAACTCCCATTAACCTCTCCAAGATCTTCGCTTTTAGCTCTTTCATCAGCCGTCTCGAATTCCGGCATTGGAAGCCGGAAAACTCCGACGATGAGGCCTCCACCAGTCAAGAAGGTACTTCCTTTTCATCTTTACATACATCGACATCCATATATATATGTGTATATCCTTTTTCAGCTGTGTGACACACACACACATCCTTTTTCCTAGTTGCAAATTTCAGAATCATGAAGAAAATTAGTATTCCTTAGCATTTTCAGCTGGGTGATATAAAAACTGGGAAAAAGAGAAGAAAATCATCGGGTTCGTGGGTGTGTATTTGTTTCTCTATTCCATGACAATGGAATAAGAGCTATTCGGAGGAGAAGAGTCCATAATAATCAGATAAACGCAACCAAAACAAGGAAAGGAAAAACGGTGGAATGGCAAATGAGTGGTTTGGCAGAAGGAGGCAGTGTCAGAAACACAGAAAGTACAAGAATAAAAAAGGAACAGAGTAAGTAATGGTGGAGGAGACTGTTTAGCAACAGTTGGGAAAAGTTCAAGTTTGAATTGTTCGAATTATTACAGAGAATCAGAGTAGACAGGTTCTGTAATCTCAAAGATTAGACAGAAACTAAACATAATTTTGGGGTTAAACTCGGAAGCGAAGTGGGGGTGGGGGACAAGGAAAACAAAACAGAAGTTTACATCTAGACAACACTGACTAGTTTCTTTCAAGTCTTTTCTTTTTTTGAAAATAAAAAAGAATAGTTAATTGTATATTTGTTTGAGAGATGGTATGTTTTTGGATTTATTTTTAAAATTTAATATTTTCACGGGGACCCACACAAAAATTATGTAGACTCATTCATCTCAATCAACTTTGGGAAAAATGGAGTTGGGTCATGGGAGAAAAACAAGGTCTCAGAGGTGTCCCTGGAAAACTGCAGCCTGTCATGGAATCACCACTTGACCAAAGACTCCAAGGAGACCAAGACTGTGATAGAGCATGGCAAGACCCGTGCCTCGCTTAGGTGGCGGAAGCGGATTGGCCATCTCTTCCAGCTCATCAGAAGGAAAAGGTCCAACAAAGGGACAGTCTGCCACGTGGAAGGAGTTAAGACAAGGAAAGGCTGGATAAGAACTCTGACAAGGTCAAGAAACACTGAATAG

mRNA sequence

ATGAATGTGTACAGAGATCAAATGTCCTCCTGTTACTTCCATCCCAAAGAAATAGTAGTGGGTGTCTGCGCTTTGTGCTTAAACGAGAGGCTTCTTATCCTGGCGTCCAGACGAGGCCGCCACCACTCTTCAGCCCGAAGCTGCCGGAAAACTCCCATTAACCTCTCCAAGATCTTCGCTTTTAGCTCTTTCATCAGCCGTCTCGAATTCCGGCATTGGAAGCCGGAAAACTCCGACGATGAGGCCTCCACCAGTCAAGAAGACTCATTCATCTCAATCAACTTTGGGAAAAATGGAGTTGGGTCATGGGAGAAAAACAAGGTCTCAGAGGTGTCCCTGGAAAACTGCAGCCTGTCATGGAATCACCACTTGACCAAAGACTCCAAGGAGACCAAGACTGTGATAGAGCATGGCAAGACCCGTGCCTCGCTTAGGTGGCGGAAGCGGATTGGCCATCTCTTCCAGCTCATCAGAAGGAAAAGGTCCAACAAAGGGACAGTCTGCCACGTGGAAGGAGTTAAGACAAGGAAAGGCTGGATAAGAACTCTGACAAGGTCAAGAAACACTGAATAG

Coding sequence (CDS)

ATGAATGTGTACAGAGATCAAATGTCCTCCTGTTACTTCCATCCCAAAGAAATAGTAGTGGGTGTCTGCGCTTTGTGCTTAAACGAGAGGCTTCTTATCCTGGCGTCCAGACGAGGCCGCCACCACTCTTCAGCCCGAAGCTGCCGGAAAACTCCCATTAACCTCTCCAAGATCTTCGCTTTTAGCTCTTTCATCAGCCGTCTCGAATTCCGGCATTGGAAGCCGGAAAACTCCGACGATGAGGCCTCCACCAGTCAAGAAGACTCATTCATCTCAATCAACTTTGGGAAAAATGGAGTTGGGTCATGGGAGAAAAACAAGGTCTCAGAGGTGTCCCTGGAAAACTGCAGCCTGTCATGGAATCACCACTTGACCAAAGACTCCAAGGAGACCAAGACTGTGATAGAGCATGGCAAGACCCGTGCCTCGCTTAGGTGGCGGAAGCGGATTGGCCATCTCTTCCAGCTCATCAGAAGGAAAAGGTCCAACAAAGGGACAGTCTGCCACGTGGAAGGAGTTAAGACAAGGAAAGGCTGGATAAGAACTCTGACAAGGTCAAGAAACACTGAATAG

Protein sequence

MNVYRDQMSSCYFHPKEIVVGVCALCLNERLLILASRRGRHHSSARSCRKTPINLSKIFAFSSFISRLEFRHWKPENSDDEASTSQEDSFISINFGKNGVGSWEKNKVSEVSLENCSLSWNHHLTKDSKETKTVIEHGKTRASLRWRKRIGHLFQLIRRKRSNKGTVCHVEGVKTRKGWIRTLTRSRNTE

Homology

[Close]

BLAST of Lag0029236 vs. NCBI nr
Match: KAG7016491.1 (hypothetical protein SDJN02_21600, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 377.1 bits (967), Expect = 9.0e-101
Identity = 183/190 (96.32%), Postives = 187/190 (98.42%), Query Frame = 0


Query: 1   MNVYRDQMSSCYFHPKEIVVGVCALCLNERLLILASRRGRHHSSARSCRKTPINLSKIFA 60
           MNVYRDQ+SSCYFHPKEIVVGVCA+CLNERL ILASRRGRHHSSARSCRKTPINLSKIFA
Sbjct: 54  MNVYRDQISSCYFHPKEIVVGVCAVCLNERLHILASRRGRHHSSARSCRKTPINLSKIFA 113

Query: 61  FSSFISRLEFRHWKPENSDDEASTSQEDSFISINFGKNGVGSWEKNKVSEVSLENCSLSW 120
           FSSFISRLEFRHWKP NSDDE STSQEDSFISINFGKNGVGSWE+NKVSEVSLENCSLSW
Sbjct: 114 FSSFISRLEFRHWKPGNSDDEVSTSQEDSFISINFGKNGVGSWEENKVSEVSLENCSLSW 173

Query: 121 NHHLTKDSKETKTVIEHGKTRASLRWRKRIGHLFQLIRRKRSNKGTVCHVEGVKTRKGWI 180
           NHHLTKDSKETKTVIEHGKTRASLRWRKRIGHLFQLIRRKRSNKGTVCHVEGVKTRKGWI
Sbjct: 174 NHHLTKDSKETKTVIEHGKTRASLRWRKRIGHLFQLIRRKRSNKGTVCHVEGVKTRKGWI 233

Query: 181 RTLTRSRNTE 191
           +TLTRSRNTE
Sbjct: 234 KTLTRSRNTE 243

[Close]

BLAST of Lag0029236 vs. NCBI nr
Match: XP_022938530.1 (uncharacterized protein LOC111444738 [Cucurbita moschata] >KAG6578970.1 hypothetical protein SDJN03_23418, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 377.1 bits (967), Expect = 9.0e-101
Identity = 183/190 (96.32%), Postives = 187/190 (98.42%), Query Frame = 0


Query: 1   MNVYRDQMSSCYFHPKEIVVGVCALCLNERLLILASRRGRHHSSARSCRKTPINLSKIFA 60
           MNVYRDQ+SSCYFHPKEIVVGVCA+CLNERL ILASRRGRHHSSARSCRKTPINLSKIFA
Sbjct: 1   MNVYRDQISSCYFHPKEIVVGVCAVCLNERLHILASRRGRHHSSARSCRKTPINLSKIFA 60

Query: 61  FSSFISRLEFRHWKPENSDDEASTSQEDSFISINFGKNGVGSWEKNKVSEVSLENCSLSW 120
           FSSFISRLEFRHWKP NSDDE STSQEDSFISINFGKNGVGSWE+NKVSEVSLENCSLSW
Sbjct: 61  FSSFISRLEFRHWKPGNSDDEVSTSQEDSFISINFGKNGVGSWEENKVSEVSLENCSLSW 120

Query: 121 NHHLTKDSKETKTVIEHGKTRASLRWRKRIGHLFQLIRRKRSNKGTVCHVEGVKTRKGWI 180
           NHHLTKDSKETKTVIEHGKTRASLRWRKRIGHLFQLIRRKRSNKGTVCHVEGVKTRKGWI
Sbjct: 121 NHHLTKDSKETKTVIEHGKTRASLRWRKRIGHLFQLIRRKRSNKGTVCHVEGVKTRKGWI 180

Query: 181 RTLTRSRNTE 191
           +TLTRSRNTE
Sbjct: 181 KTLTRSRNTE 190

[Close]

BLAST of Lag0029236 vs. NCBI nr
Match: XP_022141395.1 (uncharacterized protein LOC111011807 [Momordica charantia])

HSP 1 Score: 374.0 bits (959), Expect = 7.6e-100
Identity = 182/190 (95.79%), Postives = 188/190 (98.95%), Query Frame = 0


Query: 1   MNVYRDQMSSCYFHPKEIVVGVCALCLNERLLILASRRGRHHSSARSCRKTPINLSKIFA 60
           MNVYRDQ+SSCYFHPKEIVVGVCALCLNERLLILAS+RGRHHSSAR+CRKTPINLSKIFA
Sbjct: 1   MNVYRDQISSCYFHPKEIVVGVCALCLNERLLILASKRGRHHSSARTCRKTPINLSKIFA 60

Query: 61  FSSFISRLEFRHWKPENSDDEASTSQEDSFISINFGKNGVGSWEKNKVSEVSLENCSLSW 120
           FSSFI+RLEFRH KPENSDDEASTS EDSFISINFGKNGVGSWEKNKVSEVSLENCSLSW
Sbjct: 61  FSSFITRLEFRHPKPENSDDEASTSHEDSFISINFGKNGVGSWEKNKVSEVSLENCSLSW 120

Query: 121 NHHLTKDSKETKTVIEHGKTRASLRWRKRIGHLFQLIRRKRSNKGTVCHVEGVKTRKGWI 180
           NHHLTKDSKETKTVIEHGKTRASLRWRKRIGHLFQLIRRKRSNKGTVCHVEGVKTRKGW+
Sbjct: 121 NHHLTKDSKETKTVIEHGKTRASLRWRKRIGHLFQLIRRKRSNKGTVCHVEGVKTRKGWM 180

Query: 181 RTLTRSRNTE 191
           RTLTRSRN+E
Sbjct: 181 RTLTRSRNSE 190

[Close]

BLAST of Lag0029236 vs. NCBI nr
Match: XP_022993742.1 (uncharacterized protein LOC111489653 isoform X2 [Cucurbita maxima])

HSP 1 Score: 372.5 bits (955), Expect = 2.2e-99
Identity = 180/190 (94.74%), Postives = 186/190 (97.89%), Query Frame = 0


Query: 1   MNVYRDQMSSCYFHPKEIVVGVCALCLNERLLILASRRGRHHSSARSCRKTPINLSKIFA 60
           MNVYRDQ+SSCYFHPKEIVVG+CALCLNERL ILASRRGRH SSARSCRKTPINLSKIFA
Sbjct: 1   MNVYRDQISSCYFHPKEIVVGICALCLNERLHILASRRGRHQSSARSCRKTPINLSKIFA 60

Query: 61  FSSFISRLEFRHWKPENSDDEASTSQEDSFISINFGKNGVGSWEKNKVSEVSLENCSLSW 120
           +SSFISRLEFRHWKP NSDDE STSQEDSFISINFGKNGVGSWE+NKVSEVSLENCSLSW
Sbjct: 61  YSSFISRLEFRHWKPGNSDDEVSTSQEDSFISINFGKNGVGSWEENKVSEVSLENCSLSW 120

Query: 121 NHHLTKDSKETKTVIEHGKTRASLRWRKRIGHLFQLIRRKRSNKGTVCHVEGVKTRKGWI 180
           NHHLTKDSKETKTVIEHGKTRASL+WRKRIGHLFQLIRRKRSNKGTVCHVEGVKTRKGWI
Sbjct: 121 NHHLTKDSKETKTVIEHGKTRASLKWRKRIGHLFQLIRRKRSNKGTVCHVEGVKTRKGWI 180

Query: 181 RTLTRSRNTE 191
           +TLTRSRNTE
Sbjct: 181 KTLTRSRNTE 190

[Close]

BLAST of Lag0029236 vs. NCBI nr
Match: XP_023550881.1 (uncharacterized protein LOC111808883 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 372.5 bits (955), Expect = 2.2e-99
Identity = 182/190 (95.79%), Postives = 185/190 (97.37%), Query Frame = 0


Query: 1   MNVYRDQMSSCYFHPKEIVVGVCALCLNERLLILASRRGRHHSSARSCRKTPINLSKIFA 60
           MNVYRDQ+SSCYFHPKEIVVGVCALCLNERL ILASRRGRHHSSARSCRKTPINLSKIFA
Sbjct: 1   MNVYRDQISSCYFHPKEIVVGVCALCLNERLHILASRRGRHHSSARSCRKTPINLSKIFA 60

Query: 61  FSSFISRLEFRHWKPENSDDEASTSQEDSFISINFGKNGVGSWEKNKVSEVSLENCSLSW 120
           FSSFISRLEFRHWKP NSDDE STSQEDSFISINFGKNGVGSWE+NKVSEVSLENCSLSW
Sbjct: 61  FSSFISRLEFRHWKPGNSDDEVSTSQEDSFISINFGKNGVGSWEENKVSEVSLENCSLSW 120

Query: 121 NHHLTKDSKETKTVIEHGKTRASLRWRKRIGHLFQLIRRKRSNKGTVCHVEGVKTRKGWI 180
           NHHLTKD KETKTVIEHGKTRASLRWRKRI HLFQLIRRKRSNKGTVCHVEGVKTRKGWI
Sbjct: 121 NHHLTKDYKETKTVIEHGKTRASLRWRKRICHLFQLIRRKRSNKGTVCHVEGVKTRKGWI 180

Query: 181 RTLTRSRNTE 191
           +TLTRSRNTE
Sbjct: 181 KTLTRSRNTE 190

The following BLAST results are available for this feature:

BLAST of Lag0029236 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7016491.1	9.0e-101	96.32	hypothetical protein SDJN02_21600, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_022938530.1	9.0e-101	96.32	uncharacterized protein LOC111444738 [Cucurbita moschata] >KAG6578970.1 hypothet...	[more]
XP_022141395.1	7.6e-100	95.79	uncharacterized protein LOC111011807 [Momordica charantia]	[more]
XP_022993742.1	2.2e-99	94.74	uncharacterized protein LOC111489653 isoform X2 [Cucurbita maxima]	[more]
XP_023550881.1	2.2e-99	95.79	uncharacterized protein LOC111808883 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Lag0029236 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008004	Protein OCTOPUS-like	PFAM	PF05340	DUF740	coord: 7..60 e-value: 2.0E-6 score: 26.8
None	No IPR available	PANTHER	PTHR35995	OS04G0690500 PROTEIN	coord: 1..189

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0029236.1	Lag0029236.1	mRNA