Lag0029089 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTTGAGCCAGCGAAAAGGGCGGAGGATCAACATCCGGATTCTGATCTCCTCAAATTTTTTGTCGATGCAGCCTGGTTATCCATCCCTCCAGAAACAGGAATTGGAGTCATCTGCATGAACCACCATGGTAATGTAGTTGGCGCTAGTGCTTCCTTCATAGAAATGGATTTTGAAGCCCCCCTTGCTGAGTTGAAGGCCATAAAAGAAGGGATGAAGCTTGCTTTAAATTTTGACTGCCCTAAAATCGAAATTTATTCTGACTGTCTACAAGCAATTAAATTCGTGTCAAAAGCCACAGAGCCTTGGTGTAATGTGGAGGTGCAAGTGGAGGATATTTGGAATTTGTCTAATCTGTTTGCAGAATGTAGTTTTAAGTATATCCCAAGAGAGCTGAATTCCCTAGCTGATAGCTTAGCTAAGAAGGCTAAACGATCGGGTATTAATGATGTATGGGTTGGTTCAATCCCAGAGTGGATTGTTTCGTTGGTCGAGTATGACCGTTCTATCTCTGCCCACGTGGCGTAA ATGTTTGAGCCAGCGAAAAGGGCGGAGGATCAACATCCGGATTCTGATCTCCTCAAATTTTTTGTCGATGCAGCCTGGTTATCCATCCCTCCAGAAACAGGAATTGGAGTCATCTGCATGAACCACCATGGTAATGTAGTTGGCGCTAGTGCTTCCTTCATAGAAATGGATTTTGAAGCCCCCCTTGCTGAGTTGAAGGCCATAAAAGAAGGGATGAAGCTTGCTTTAAATTTTGACTGCCCTAAAATCGAAATTTATTCTGACTGTCTACAAGCAATTAAATTCGTGTCAAAAGCCACAGAGCCTTGGTGTAATGTGGAGGTGCAAGTGGAGGATATTTGGAATTTGTCTAATCTGTTTGCAGAATGTAGTTTTAAGTATATCCCAAGAGAGCTGAATTCCCTAGCTGATAGCTTAGCTAAGAAGGCTAAACGATCGGGTATTAATGATGTATGGGTTGGTTCAATCCCAGAGTGGATTGTTTCGTTGGTCGAGTATGACCGTTCTATCTCTGCCCACGTGGCGTAA ATGTTTGAGCCAGCGAAAAGGGCGGAGGATCAACATCCGGATTCTGATCTCCTCAAATTTTTTGTCGATGCAGCCTGGTTATCCATCCCTCCAGAAACAGGAATTGGAGTCATCTGCATGAACCACCATGGTAATGTAGTTGGCGCTAGTGCTTCCTTCATAGAAATGGATTTTGAAGCCCCCCTTGCTGAGTTGAAGGCCATAAAAGAAGGGATGAAGCTTGCTTTAAATTTTGACTGCCCTAAAATCGAAATTTATTCTGACTGTCTACAAGCAATTAAATTCGTGTCAAAAGCCACAGAGCCTTGGTGTAATGTGGAGGTGCAAGTGGAGGATATTTGGAATTTGTCTAATCTGTTTGCAGAATGTAGTTTTAAGTATATCCCAAGAGAGCTGAATTCCCTAGCTGATAGCTTAGCTAAGAAGGCTAAACGATCGGGTATTAATGATGTATGGGTTGGTTCAATCCCAGAGTGGATTGTTTCGTTGGTCGAGTATGACCGTTCTATCTCTGCCCACGTGGCGTAA MFEPAKRAEDQHPDSDLLKFFVDAAWLSIPPETGIGVICMNHHGNVVGASASFIEMDFEAPLAELKAIKEGMKLALNFDCPKIEIYSDCLQAIKFVSKATEPWCNVEVQVEDIWNLSNLFAECSFKYIPRELNSLADSLAKKAKRSGINDVWVGSIPEWIVSLVEYDRSISAHVA Homology
BLAST of Lag0029089 vs. NCBI nr
Match: XP_038902513.1 (uncharacterized protein LOC120089172 [Benincasa hispida]) HSP 1 Score: 101.3 bits (251), Expect = 8.8e-18 Identity = 52/143 (36.36%), Postives = 78/143 (54.55%), Query Frame = 0
BLAST of Lag0029089 vs. NCBI nr
Match: XP_027093792.1 (uncharacterized protein LOC113714198 [Coffea arabica]) HSP 1 Score: 91.3 bits (225), Expect = 9.1e-15 Identity = 49/155 (31.61%), Postives = 74/155 (47.74%), Query Frame = 0
BLAST of Lag0029089 vs. NCBI nr
Match: XP_027119939.1 (uncharacterized protein LOC113736922 [Coffea arabica]) HSP 1 Score: 87.4 bits (215), Expect = 1.3e-13 Identity = 50/161 (31.06%), Postives = 81/161 (50.31%), Query Frame = 0
BLAST of Lag0029089 vs. NCBI nr
Match: XP_027061983.1 (uncharacterized protein LOC113688376 [Coffea arabica]) HSP 1 Score: 85.5 bits (210), Expect = 5.0e-13 Identity = 46/155 (29.68%), Postives = 73/155 (47.10%), Query Frame = 0
BLAST of Lag0029089 vs. NCBI nr
Match: XP_027088768.1 (uncharacterized protein LOC113710130 [Coffea arabica]) HSP 1 Score: 84.3 bits (207), Expect = 1.1e-12 Identity = 47/155 (30.32%), Postives = 76/155 (49.03%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|