Lag0028796 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0028796
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionCCHC-type domain-containing protein
Locationchr8: 30832705 .. 30833949 (-)
RNA-Seq ExpressionLag0028796
SyntenyLag0028796
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTGTTTTTGCTTGACCAGGAAATTGCTTAGCCCCCGTTTGATCGGTTGCGAAATTCTGCGCAGAACTTTGTCTATTGCATGGCGGGTGGATGGGGGACTACAAGTTGAGCGACTGGGTAAGAACGTGTTTCTCTTTAATTTTGTTAAGTTAGTTGATCGTAATCGTGTTTTTCGCACTGGGCCGTGGTTTTTTGATAAGTTTTTGTTGGTCTTGGAAATTTTGGATGCTCTGGTAAAGCCTTCGGAATTGTTGTTCAATAAAGCTTCTTTCTGGGTCCATTTTTATGATCTTCCGTTGGCTTGTATGAATGCTATTATGGCCAAAAAATTGGGGAATGTTATTGGAGAATTTGAGGAAGTGGACTGTAATGCCAATGGCTGTTGTTGGGGATTCAGTTTGCGTGTTCGGGCTCGGATTGATATTATAAAACTACTTAGACGGGGTATTAAGATCAATGTTGACAGCCCAATTGGGGGTAGCTGGATCCCTATGAAATATGAGCGATTGCCGGAATTTTGCTCTAGGTTTGGTATTCTGGGTCACGGAATGAAAGACTGTTCTTTGTTGCTTTCTTCGAAAGAAGATGCGGTTCCATCAGCTTGTGAGTATGGGGCATGGTTGCGTTTTGATGGTCCTTCGAAGCCGACTGCAAAGCCTTCACCTGGGTTAAGTTCGTCGGTGTCTTCTGCGGGCAAAAATGTTCATCTTGGTTCTTCAGAGTTGGGTGCGGCGCCGCCGTCAGAGACGGTGGATGTCGGTTGTGCGATGAAAGCGCAAGTTCCGGCACCTATACCAAATGTGGAGACTTTCCAGGTGGATAACGGTCAGCCGATGGTTACTGCGGCAGATAATGTGAAGTCGTTTCCTATTATTTCGGAGAGTGGTTTAGTGGAGAAAGATGGTTCAGTTATTACCCCAGTGCTTAGTGATTTGGGTAAGGATAAGGTGGTTGGTGATGATCTAAATGGGCTAAATTTGGCTGGTGGGTCAAATCCAGTTGGTGGGCCAAATTTGAATGGTGGGCCTAGTGGTAAACGGAAACAAAAAGTGCGTGGGTCAAATTCTTCAAAGGCTTGCCCTGCAAATGAGTCTGCAAAAAGAAAGGAAGCTTCTGACTTATTGGGACCGAATAGTAAGAAGTTGAAGCTAGTGCTGGAGGATAATGTTGGTTTGTCTCATGATGGTACCGATCTTTCTGGTGTATCGGCGGAGGCTGTTGAGCAGCCCCGCCGGGAATTATGA

mRNA sequence

ATGTGTTTTTGCTTGACCAGGAAATTGCTTAGCCCCCGTTTGATCGGTTGCGAAATTCTGCGCAGAACTTTGTCTATTGCATGGCGGGTGGATGGGGGACTACAAGTTGAGCGACTGGGTAAGAACGTGTTTCTCTTTAATTTTGTTAAGTTAGTTGATCGTAATCGTGTTTTTCGCACTGGGCCGTGGTTTTTTGATAAGTTTTTGTTGGTCTTGGAAATTTTGGATGCTCTGGTAAAGCCTTCGGAATTGTTGTTCAATAAAGCTTCTTTCTGGGTCCATTTTTATGATCTTCCGTTGGCTTGTATGAATGCTATTATGGCCAAAAAATTGGGGAATGTTATTGGAGAATTTGAGGAAGTGGACTGTAATGCCAATGGCTGTTGTTGGGGATTCAGTTTGCGTGTTCGGGCTCGGATTGATATTATAAAACTACTTAGACGGGGTATTAAGATCAATGTTGACAGCCCAATTGGGGGTAGCTGGATCCCTATGAAATATGAGCGATTGCCGGAATTTTGCTCTAGGTTTGGTATTCTGGGTCACGGAATGAAAGACTGTTCTTTGTTGCTTTCTTCGAAAGAAGATGCGGTTCCATCAGCTTGTGAGTATGGGGCATGGTTGCGTTTTGATGGTCCTTCGAAGCCGACTGCAAAGCCTTCACCTGGGTTAAGTTCGTCGGTGTCTTCTGCGGGCAAAAATGTTCATCTTGGTTCTTCAGAGTTGGGTGCGGCGCCGCCGTCAGAGACGGTGGATGTCGGTTGTGCGATGAAAGCGCAAGTTCCGGCACCTATACCAAATGTGGAGACTTTCCAGGTGGATAACGGTCAGCCGATGGTTACTGCGGCAGATAATGTGAAGTCGTTTCCTATTATTTCGGAGAGTGGTTTAGTGGAGAAAGATGGTTCAGTTATTACCCCAGTGCTTAGTGATTTGGGTAAGGATAAGGTGGTTGGTGATGATCTAAATGGGCTAAATTTGGCTGGTGGGTCAAATCCAGTTGGTGGGCCAAATTTGAATGGTGGGCCTAGTGGTAAACGGAAACAAAAAGTGCGTGGGTCAAATTCTTCAAAGGCTTGCCCTGCAAATGAGTCTGCAAAAAGAAAGGAAGCTTCTGACTTATTGGGACCGAATAGTAAGAAGTTGAAGCTAGTGCTGGAGGATAATGTTGGTTTGTCTCATGATGGTACCGATCTTTCTGGTGTATCGGCGGAGGCTGTTGAGCAGCCCCGCCGGGAATTATGA

Coding sequence (CDS)

ATGTGTTTTTGCTTGACCAGGAAATTGCTTAGCCCCCGTTTGATCGGTTGCGAAATTCTGCGCAGAACTTTGTCTATTGCATGGCGGGTGGATGGGGGACTACAAGTTGAGCGACTGGGTAAGAACGTGTTTCTCTTTAATTTTGTTAAGTTAGTTGATCGTAATCGTGTTTTTCGCACTGGGCCGTGGTTTTTTGATAAGTTTTTGTTGGTCTTGGAAATTTTGGATGCTCTGGTAAAGCCTTCGGAATTGTTGTTCAATAAAGCTTCTTTCTGGGTCCATTTTTATGATCTTCCGTTGGCTTGTATGAATGCTATTATGGCCAAAAAATTGGGGAATGTTATTGGAGAATTTGAGGAAGTGGACTGTAATGCCAATGGCTGTTGTTGGGGATTCAGTTTGCGTGTTCGGGCTCGGATTGATATTATAAAACTACTTAGACGGGGTATTAAGATCAATGTTGACAGCCCAATTGGGGGTAGCTGGATCCCTATGAAATATGAGCGATTGCCGGAATTTTGCTCTAGGTTTGGTATTCTGGGTCACGGAATGAAAGACTGTTCTTTGTTGCTTTCTTCGAAAGAAGATGCGGTTCCATCAGCTTGTGAGTATGGGGCATGGTTGCGTTTTGATGGTCCTTCGAAGCCGACTGCAAAGCCTTCACCTGGGTTAAGTTCGTCGGTGTCTTCTGCGGGCAAAAATGTTCATCTTGGTTCTTCAGAGTTGGGTGCGGCGCCGCCGTCAGAGACGGTGGATGTCGGTTGTGCGATGAAAGCGCAAGTTCCGGCACCTATACCAAATGTGGAGACTTTCCAGGTGGATAACGGTCAGCCGATGGTTACTGCGGCAGATAATGTGAAGTCGTTTCCTATTATTTCGGAGAGTGGTTTAGTGGAGAAAGATGGTTCAGTTATTACCCCAGTGCTTAGTGATTTGGGTAAGGATAAGGTGGTTGGTGATGATCTAAATGGGCTAAATTTGGCTGGTGGGTCAAATCCAGTTGGTGGGCCAAATTTGAATGGTGGGCCTAGTGGTAAACGGAAACAAAAAGTGCGTGGGTCAAATTCTTCAAAGGCTTGCCCTGCAAATGAGTCTGCAAAAAGAAAGGAAGCTTCTGACTTATTGGGACCGAATAGTAAGAAGTTGAAGCTAGTGCTGGAGGATAATGTTGGTTTGTCTCATGATGGTACCGATCTTTCTGGTGTATCGGCGGAGGCTGTTGAGCAGCCCCGCCGGGAATTATGA

Protein sequence

MCFCLTRKLLSPRLIGCEILRRTLSIAWRVDGGLQVERLGKNVFLFNFVKLVDRNRVFRTGPWFFDKFLLVLEILDALVKPSELLFNKASFWVHFYDLPLACMNAIMAKKLGNVIGEFEEVDCNANGCCWGFSLRVRARIDIIKLLRRGIKINVDSPIGGSWIPMKYERLPEFCSRFGILGHGMKDCSLLLSSKEDAVPSACEYGAWLRFDGPSKPTAKPSPGLSSSVSSAGKNVHLGSSELGAAPPSETVDVGCAMKAQVPAPIPNVETFQVDNGQPMVTAADNVKSFPIISESGLVEKDGSVITPVLSDLGKDKVVGDDLNGLNLAGGSNPVGGPNLNGGPSGKRKQKVRGSNSSKACPANESAKRKEASDLLGPNSKKLKLVLEDNVGLSHDGTDLSGVSAEAVEQPRREL
Homology
BLAST of Lag0028796 vs. NCBI nr
Match: XP_022156185.1 (uncharacterized protein LOC111023135 [Momordica charantia] >XP_022156186.1 uncharacterized protein LOC111023135 [Momordica charantia])

HSP 1 Score: 242.3 bits (617), Expect = 7.5e-60
Identity = 114/243 (46.91%), Postives = 155/243 (63.79%), Query Frame = 0

Query: 1   MCFCLTRKLLSPRLIGCEILRRTLSIAWRVDGGLQVERLGKNVFLFNFVKLVDRNRVFRT 60
           + + L  KLL+ R+I  ++L R L +AW+V+  L VE +GKN+FLF+F +  D NRV +T
Sbjct: 38  LAYSLVGKLLAKRIISADVLSRVLLLAWKVEHQLTVESIGKNLFLFHFCRECDMNRVMKT 97

Query: 61  GPWFFDKFLLVLEILDALVKPSELLFNKASFWVHFYDLPLACMNAIMAKKLGNVIGEFEE 120
           GPWFFDK L+VL+   +    SEL FN+ +FW+H +DLP++ +N  MA +LGN IG F +
Sbjct: 98  GPWFFDKALIVLQKPCSSKNISELEFNRVAFWIHLFDLPMSWLNKTMAIRLGNAIGNFVD 157

Query: 121 VDCNANGCCWGFSLRVRARIDIIKLLRRGIKINVDSPIGGSWIPMKYERLPEFCSRFGIL 180
           VDCN  G  WG SLR+R  IDI K LRRGIKIN+D P+GG WIP++YERLP+FC   G++
Sbjct: 158 VDCNEKGFSWGASLRIRVLIDITKPLRRGIKINIDGPMGGCWIPIQYERLPDFCYFCGVI 217

Query: 181 GHGMKDCSLLLSSKEDAVPSACEYGAWLRFDGPSKPTAKPSPGLSSSVSSAGKNVHLGSS 240
           GH   DC     + +D   +  EYG WLRF G      K   G S +   +  +  + S 
Sbjct: 218 GHSSHDCDARYLAAQDDSRATSEYGPWLRFVGSKAGAQKGRKGKSPAREDSCGSSSMNSK 277

Query: 241 ELG 244
           E G
Sbjct: 278 ERG 280

BLAST of Lag0028796 vs. NCBI nr
Match: XP_022132681.1 (uncharacterized protein LOC111005481 [Momordica charantia])

HSP 1 Score: 231.5 bits (589), Expect = 1.3e-56
Identity = 107/206 (51.94%), Postives = 139/206 (67.48%), Query Frame = 0

Query: 8   KLLSPRLIGCEILRRTLSIAWRVD-GGLQVERLGKNVFLFNFVKLVDRNRVFRTGPWFFD 67
           KLLS R I C +L+ TL IAW++D     V+ +G N+FLFNF +  DRNR+ R GPW FD
Sbjct: 45  KLLSKRSISCTVLKNTLKIAWKLDCKAFSVDIIGFNIFLFNFNRSSDRNRILRMGPWTFD 104

Query: 68  KFLLVLEILDALVKPSELLFNKASFWVHFYDLPLACMNAIMAKKLGNVIGEFEEVDCNAN 127
           + L++++   +L KP ++ F   S WVHF+DL LACMN  MA +LGN IG FE+V+ NAN
Sbjct: 105 RALIIIDNPVSLTKPLDMDFRNVSLWVHFFDLSLACMNKTMATRLGNAIGLFEDVESNAN 164

Query: 128 GCCWGFSLRVRARIDIIKLLRRGIKINVDSPIGGSWIPMKYERLPEFCSRFGILGHGMKD 187
             CWG  LRVR R D++K L RGIK+N+D P+GG WIP++YERLP+F    G L H +KD
Sbjct: 165 NFCWGSCLRVRVRFDVMKPLHRGIKLNLDGPMGGCWIPIQYERLPDFRYHCGRLDHILKD 224

Query: 188 CSLLLSSKEDAVPSACEYGAWLRFDG 213
           CS       D+V    +YG WLRF G
Sbjct: 225 CS---DCCVDSVSKNLQYGPWLRFQG 247

BLAST of Lag0028796 vs. NCBI nr
Match: XP_022158377.1 (uncharacterized protein LOC111024874 [Momordica charantia])

HSP 1 Score: 205.3 bits (521), Expect = 1.0e-48
Identity = 107/259 (41.31%), Postives = 156/259 (60.23%), Query Frame = 0

Query: 5   LTRKLLSPRLIGCEILRRTLSIAWRVD-GGLQVERLGKNVFLFNFVKLVDRNRVFRTGPW 64
           L  KL   R I C +++ T+  AW+++    +V+ LG N+FLF+F + +DRN+++++GPW
Sbjct: 42  LVGKLFIKRPITCPVMKNTMRTAWKLENNAFEVQSLGYNLFLFSFARALDRNKIYKSGPW 101

Query: 65  FFDKFLLVLEILDALVKPSELLFNKASFWVHFYDLPLACMNAIMAKKLGNVIGEFEEVDC 124
            FD+ L+++    AL+ PSEL F K   WV F+DLPL C+   MA +LGN +G FEE DC
Sbjct: 102 TFDRTLVLINKPVALIPPSELDFTKLPIWVRFFDLPLGCITRDMAIRLGNALGGFEEADC 161

Query: 125 NANGCCWGFSLRVRARIDIIKLLRRGIKINVDSPIGGSWIPMKYERLPEFCSRFGILGHG 184
           +     WG +LRVR  +DI K LRRGIK+N+D PIGG+WIP++YERLP+FC         
Sbjct: 162 DDLNPDWGSNLRVRVMLDISKPLRRGIKLNLDGPIGGAWIPIQYERLPDFCYH------- 221

Query: 185 MKDCSLLLSSKEDAVPSACEYGAWLRFDGPSKPT----AKPSPGL-----SSSVSSAGKN 244
              C L  S K+       +YG+WLR+ G  KPT     +P   L     ++S SS+   
Sbjct: 222 ---CGLSSSRKKH------QYGSWLRYQGTVKPTMPQMKQPQEDLLDKSGNNSFSSSTSP 281

Query: 245 VHLGSSELGAAPPSETVDV 254
           V  GS  + +AP +  + +
Sbjct: 282 VGAGSQGVQSAPATGPIAI 284

BLAST of Lag0028796 vs. NCBI nr
Match: XP_028122006.1 (uncharacterized protein LOC114319195 [Camellia sinensis])

HSP 1 Score: 181.8 bits (460), Expect = 1.2e-41
Identity = 87/210 (41.43%), Postives = 127/210 (60.48%), Query Frame = 0

Query: 4   CLTRKLLSPRLIGCEILRRTLSIAWRVDGGLQVERLGKNVFLFNFVKLVDRNRVFRTGPW 63
           CL  KLL+ R    E ++ TL   W+   G+QV  +G N+F+F F  +VD+ RV   GPW
Sbjct: 39  CLVGKLLTRRPFNVEAMKNTLLSVWQPTKGMQVRVIGDNLFVFVFGHVVDKRRVLSDGPW 98

Query: 64  FFDKFLLVLEILDALVKPSELLFNKASFWVHFYDLPLACMNAIMAKKLGNVIGEFEEVDC 123
            FDK LL+L  +D  V+PS++   +  FWVH  +LPL  MN  + + +GN +G+F ++D 
Sbjct: 99  TFDKHLLMLGEMDPNVQPSDIQLTRVQFWVHVCNLPLVLMNKKVGEIVGNAVGQFIDMDY 158

Query: 124 NANGCCWGFSLRVRARIDIIKLLRRGIKINVDS--PIGGSWIPMKYERLPEFCSRFGILG 183
              G  WG ++R+R  +D+ K LRRG+K+ + S  PI   W+  KYERLP +C   G LG
Sbjct: 159 EDGGIVWGRTMRIRVALDVRKPLRRGMKLALSSAEPI---WVDFKYERLPIYCYFCGRLG 218

Query: 184 HGMKDCSLLLSSKEDAVPSACEYGAWLRFD 212
           H  ++C   LSS + +   + +YGAWLR D
Sbjct: 219 HSERECDDKLSSADGSRVDSLQYGAWLRMD 245

BLAST of Lag0028796 vs. NCBI nr
Match: XP_028124075.1 (uncharacterized protein LOC114321128 [Camellia sinensis])

HSP 1 Score: 178.7 bits (452), Expect = 1.0e-40
Identity = 87/210 (41.43%), Postives = 124/210 (59.05%), Query Frame = 0

Query: 4   CLTRKLLSPRLIGCEILRRTLSIAWRVDGGLQVERLGKNVFLFNFVKLVDRNRVFRTGPW 63
           CL  KLL+ R    E ++ TL   W+   G+QV  +G N+F+F F  +VD+ RV   GPW
Sbjct: 39  CLVGKLLTRRPFNVEAMKNTLLSVWQPTKGMQVRVIGDNLFVFVFGHVVDKRRVLSNGPW 98

Query: 64  FFDKFLLVLEILDALVKPSELLFNKASFWVHFYDLPLACMNAIMAKKLGNVIGEFEEVDC 123
            FDK LL+L  +D  V+PS++      FWVH  +LPL  MN  + + +GN +G+F ++D 
Sbjct: 99  TFDKHLLMLGEMDPNVQPSDIQLTGVQFWVHVCNLPLVLMNKQVGQIVGNAVGQFIDMDY 158

Query: 124 NANGCCWGFSLRVRARIDIIKLLRRGIKINVDS--PIGGSWIPMKYERLPEFCSRFGILG 183
              G  WG ++R+R  ID+ K LRRG+K+ + S  PI   W+  KYERLP +C   G LG
Sbjct: 159 EDGGIAWGRTMRIRVAIDVRKPLRRGMKLALSSADPI---WVDFKYERLPIYCYFCGRLG 218

Query: 184 HGMKDCSLLLSSKEDAVPSACEYGAWLRFD 212
           H  ++C   LS  +     + +YGAWLR D
Sbjct: 219 HSDRECDDKLSFADGTRVDSLQYGAWLRMD 245

BLAST of Lag0028796 vs. ExPASy TrEMBL
Match: A0A6J1DU55 (uncharacterized protein LOC111023135 OS=Momordica charantia OX=3673 GN=LOC111023135 PE=4 SV=1)

HSP 1 Score: 242.3 bits (617), Expect = 3.6e-60
Identity = 114/243 (46.91%), Postives = 155/243 (63.79%), Query Frame = 0

Query: 1   MCFCLTRKLLSPRLIGCEILRRTLSIAWRVDGGLQVERLGKNVFLFNFVKLVDRNRVFRT 60
           + + L  KLL+ R+I  ++L R L +AW+V+  L VE +GKN+FLF+F +  D NRV +T
Sbjct: 38  LAYSLVGKLLAKRIISADVLSRVLLLAWKVEHQLTVESIGKNLFLFHFCRECDMNRVMKT 97

Query: 61  GPWFFDKFLLVLEILDALVKPSELLFNKASFWVHFYDLPLACMNAIMAKKLGNVIGEFEE 120
           GPWFFDK L+VL+   +    SEL FN+ +FW+H +DLP++ +N  MA +LGN IG F +
Sbjct: 98  GPWFFDKALIVLQKPCSSKNISELEFNRVAFWIHLFDLPMSWLNKTMAIRLGNAIGNFVD 157

Query: 121 VDCNANGCCWGFSLRVRARIDIIKLLRRGIKINVDSPIGGSWIPMKYERLPEFCSRFGIL 180
           VDCN  G  WG SLR+R  IDI K LRRGIKIN+D P+GG WIP++YERLP+FC   G++
Sbjct: 158 VDCNEKGFSWGASLRIRVLIDITKPLRRGIKINIDGPMGGCWIPIQYERLPDFCYFCGVI 217

Query: 181 GHGMKDCSLLLSSKEDAVPSACEYGAWLRFDGPSKPTAKPSPGLSSSVSSAGKNVHLGSS 240
           GH   DC     + +D   +  EYG WLRF G      K   G S +   +  +  + S 
Sbjct: 218 GHSSHDCDARYLAAQDDSRATSEYGPWLRFVGSKAGAQKGRKGKSPAREDSCGSSSMNSK 277

Query: 241 ELG 244
           E G
Sbjct: 278 ERG 280

BLAST of Lag0028796 vs. ExPASy TrEMBL
Match: A0A6J1BSZ1 (uncharacterized protein LOC111005481 OS=Momordica charantia OX=3673 GN=LOC111005481 PE=4 SV=1)

HSP 1 Score: 231.5 bits (589), Expect = 6.4e-57
Identity = 107/206 (51.94%), Postives = 139/206 (67.48%), Query Frame = 0

Query: 8   KLLSPRLIGCEILRRTLSIAWRVD-GGLQVERLGKNVFLFNFVKLVDRNRVFRTGPWFFD 67
           KLLS R I C +L+ TL IAW++D     V+ +G N+FLFNF +  DRNR+ R GPW FD
Sbjct: 45  KLLSKRSISCTVLKNTLKIAWKLDCKAFSVDIIGFNIFLFNFNRSSDRNRILRMGPWTFD 104

Query: 68  KFLLVLEILDALVKPSELLFNKASFWVHFYDLPLACMNAIMAKKLGNVIGEFEEVDCNAN 127
           + L++++   +L KP ++ F   S WVHF+DL LACMN  MA +LGN IG FE+V+ NAN
Sbjct: 105 RALIIIDNPVSLTKPLDMDFRNVSLWVHFFDLSLACMNKTMATRLGNAIGLFEDVESNAN 164

Query: 128 GCCWGFSLRVRARIDIIKLLRRGIKINVDSPIGGSWIPMKYERLPEFCSRFGILGHGMKD 187
             CWG  LRVR R D++K L RGIK+N+D P+GG WIP++YERLP+F    G L H +KD
Sbjct: 165 NFCWGSCLRVRVRFDVMKPLHRGIKLNLDGPMGGCWIPIQYERLPDFRYHCGRLDHILKD 224

Query: 188 CSLLLSSKEDAVPSACEYGAWLRFDG 213
           CS       D+V    +YG WLRF G
Sbjct: 225 CS---DCCVDSVSKNLQYGPWLRFQG 247

BLAST of Lag0028796 vs. ExPASy TrEMBL
Match: A0A6J1DX30 (uncharacterized protein LOC111024874 OS=Momordica charantia OX=3673 GN=LOC111024874 PE=4 SV=1)

HSP 1 Score: 205.3 bits (521), Expect = 4.9e-49
Identity = 107/259 (41.31%), Postives = 156/259 (60.23%), Query Frame = 0

Query: 5   LTRKLLSPRLIGCEILRRTLSIAWRVD-GGLQVERLGKNVFLFNFVKLVDRNRVFRTGPW 64
           L  KL   R I C +++ T+  AW+++    +V+ LG N+FLF+F + +DRN+++++GPW
Sbjct: 42  LVGKLFIKRPITCPVMKNTMRTAWKLENNAFEVQSLGYNLFLFSFARALDRNKIYKSGPW 101

Query: 65  FFDKFLLVLEILDALVKPSELLFNKASFWVHFYDLPLACMNAIMAKKLGNVIGEFEEVDC 124
            FD+ L+++    AL+ PSEL F K   WV F+DLPL C+   MA +LGN +G FEE DC
Sbjct: 102 TFDRTLVLINKPVALIPPSELDFTKLPIWVRFFDLPLGCITRDMAIRLGNALGGFEEADC 161

Query: 125 NANGCCWGFSLRVRARIDIIKLLRRGIKINVDSPIGGSWIPMKYERLPEFCSRFGILGHG 184
           +     WG +LRVR  +DI K LRRGIK+N+D PIGG+WIP++YERLP+FC         
Sbjct: 162 DDLNPDWGSNLRVRVMLDISKPLRRGIKLNLDGPIGGAWIPIQYERLPDFCYH------- 221

Query: 185 MKDCSLLLSSKEDAVPSACEYGAWLRFDGPSKPT----AKPSPGL-----SSSVSSAGKN 244
              C L  S K+       +YG+WLR+ G  KPT     +P   L     ++S SS+   
Sbjct: 222 ---CGLSSSRKKH------QYGSWLRYQGTVKPTMPQMKQPQEDLLDKSGNNSFSSSTSP 281

Query: 245 VHLGSSELGAAPPSETVDV 254
           V  GS  + +AP +  + +
Sbjct: 282 VGAGSQGVQSAPATGPIAI 284

BLAST of Lag0028796 vs. ExPASy TrEMBL
Match: A0A5C7IJL3 (CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_004194 PE=4 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 1.4e-40
Identity = 92/238 (38.66%), Postives = 139/238 (58.40%), Query Frame = 0

Query: 4   CLTRKLLSPRLIGCEILRRTLSIAWRVDGGLQVERLGKNVFLFNFVKLVDRNRVFRTGPW 63
           CL  K+LS + +  E     +   W   G +++E +G+NVF+F+F    DR+RV++ GPW
Sbjct: 118 CLVGKVLSGKRVNREAFISVIEHLWNPFGKVEIESVGENVFMFHFQNPEDRSRVWQRGPW 177

Query: 64  FFDKFLLVLEILDALVKPSELLFNKASFWVHFYDLPLACMNAIMAKKLGNVIGEFEEVDC 123
            FDK L+VLE+ +   + ++L FNKA FWV  +D+P+ CMN   AK L   IGE  E+  
Sbjct: 178 HFDKSLIVLEMPEGTGEIAKLRFNKADFWVQIHDIPIMCMNRRSAKWLAEQIGEVIEIPS 237

Query: 124 NANGCCWGFSLRVRARIDIIKLLRRGIKINVDSPIGGSWIPMKYERLPEFCSRFGILGHG 183
            +   CWG  LRV+ RIDI + L+R +++++D       + +KYER+PEFC   G +GHG
Sbjct: 238 ESRD-CWGKFLRVKVRIDISRPLKRWLRLSLDKSGNVVVVGLKYERMPEFCFACGRVGHG 297

Query: 184 MKDCSLLLSSKEDAVPSACEYGAWLRFDGPSKPTAKPSPGLSSSVSSAGKNVHLGSSE 242
           + +CS + + KE    +   +G W+R     KP  K S  LS   S   K+  +GSS+
Sbjct: 298 INECSDIEAKKEAMEGNNPRFGLWMRAPTTDKPKDKSSSQLSGGSSVRDKS--MGSSQ 352

BLAST of Lag0028796 vs. ExPASy TrEMBL
Match: A0A5C7GUN2 (CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_024379 PE=4 SV=1)

HSP 1 Score: 173.7 bits (439), Expect = 1.6e-39
Identity = 93/237 (39.24%), Postives = 130/237 (54.85%), Query Frame = 0

Query: 4   CLTRKLLSPRLIGCEILRRTLSIAWRVDGGLQVERLGKNVFLFNFVKLVDRNRVFRTGPW 63
           CL  K+LS R +  E  +  +   W   G + +E +GKN FLF F    DRNR++R GPW
Sbjct: 40  CLVGKVLSSRRVNREAFKTIIEQIWSPFGTVDIEAVGKNTFLFYFANPEDRNRIWRRGPW 99

Query: 64  FFDKFLLVLEILDALVKPSELLFNKASFWVHFYDLPLACMNAIMAKKLGNVIGEFEEVDC 123
            FD+ LL LE L+     S+L F+KA FWV  +D+P+ CMN  MAK L   IG+  E+  
Sbjct: 100 HFDRHLLALEKLEGTGNISQLSFSKAEFWVQIHDIPIMCMNRCMAKWLAAQIGDIIEIPS 159

Query: 124 NANGCCWGFSLRVRARIDIIKLLRRGIKINVDSPIGGSWIPMKYERLPEFCSRFGILGHG 183
            +   CWG  LRV+  IDI + L+R +++ +D       + +KYERLPEFC   G LGH 
Sbjct: 160 KSRE-CWGKFLRVKVLIDISRPLKRWLRLKLDQSDNIVMVNLKYERLPEFCYACGRLGHS 219

Query: 184 MKDCSLLLSSKEDAVPSACEYGAWLRFDGPSKPTAKPSPGLSSSVSSAGKNVHLGSS 241
           + DC+ + + K        ++G+W+R     K   K S    SS  S+ K   LG S
Sbjct: 220 IGDCNDVEAKKAAVEGPITKFGSWMRASLQDKIQVKASS--MSSGGSSDKERSLGES 273

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022156185.17.5e-6046.91uncharacterized protein LOC111023135 [Momordica charantia] >XP_022156186.1 uncha... [more]
XP_022132681.11.3e-5651.94uncharacterized protein LOC111005481 [Momordica charantia][more]
XP_022158377.11.0e-4841.31uncharacterized protein LOC111024874 [Momordica charantia][more]
XP_028122006.11.2e-4141.43uncharacterized protein LOC114319195 [Camellia sinensis][more]
XP_028124075.11.0e-4041.43uncharacterized protein LOC114321128 [Camellia sinensis][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1DU553.6e-6046.91uncharacterized protein LOC111023135 OS=Momordica charantia OX=3673 GN=LOC111023... [more]
A0A6J1BSZ16.4e-5751.94uncharacterized protein LOC111005481 OS=Momordica charantia OX=3673 GN=LOC111005... [more]
A0A6J1DX304.9e-4941.31uncharacterized protein LOC111024874 OS=Momordica charantia OX=3673 GN=LOC111024... [more]
A0A5C7IJL31.4e-4038.66CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_00419... [more]
A0A5C7GUN21.6e-3939.24CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_02437... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR025558Domain of unknown function DUF4283PFAMPF14111DUF4283coord: 4..137
e-value: 4.1E-23
score: 81.5
IPR025836Zinc knuckle CX2CX4HX4CPFAMPF14392zf-CCHC_4coord: 140..188
e-value: 8.8E-9
score: 34.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 324..414
NoneNo IPR availablePANTHERPTHR31286:SF84SUBFAMILY NOT NAMEDcoord: 3..194
IPR040256Uncharacterized protein At4g02000-likePANTHERPTHR31286GLYCINE-RICH CELL WALL STRUCTURAL PROTEIN 1.8-LIKEcoord: 3..194

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0028796.1Lag0028796.1mRNA