Lag0026197 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGATCGGAGTTTCGACCGACACTATTAGACTGAGGTTGTTCCCATTCTCTCTTCAAGACAAAGCCAAGGACTGGTTGGAATCAGTTGAACCTAGTAGCATTAGTACCTAGGACGAGCTAGCTCATATGTTTCTTGGAAGAGATGACTTCAACAAGTTATATGTGGCCCACGGAGAGGGCATCATTGTCAAAGAAGGCTGGAATCTATGAAATTAATGAGTCAAGTTCGTTGAAAGAGAAAATGGCTTCCCTCACAAACGCGCTGAACAAGTTGTCCTCTTCTGAAGTGGTTAAGTCCATTTCCACCTTAGCAAAGAACTATTAAAAAAAGGAGAGTCAGGATGTGGAGGAAGTTCAATTTGTAGGCAACTGTTCATTAAATCAAACTCAAGGCCTGCCGAACTTCTATCACTCAGGTTTGCGCAATAATGAAAAATTTTCTCACTCGAATACTAAGAATGTTTTGCAGCCACCACCGGGATTTGCTTCATCGAGTACGCAGGAAAAGAAAAGCAACTTGGAAGAGATGGTTTCACTCTTCATAAAGGAGCATAAGGTTCTTAACGTAAGCCTCCAATCGTCGGTGAACACTTTGGTGACGACCGTGAACAATCATGACATTGCTCTCAAGAATATGGAAGTGCAGATGGGGCAAATTTCAACAACGGTGAACGCCCTTCAGAAGGGTAAATTCCCCAACGATACCGAAGTAAACCCCCGAGAGAAATTCAAGATGATAACGCTCAGAAGTGGGAGACAACTGGAGAACCGCTCGATTGAATTGATGTGGACTTTTCCTAACCGCAAGCGCACGGGTCAAGTAATAATATAG ATGATCGGAGTTTCGACCGACACTATTAGACTGAGGTTGTTCCCATTCTCTCTTCAAGACAAAGCCAAGGACTGGTTGGAATCAGTTGAACCTAGTAGCATTAGTTTGCGCAATAATGAAAAATTTTCTCACTCGAATACTAAGAATGTTTTGCAGCCACCACCGGGATTTGCTTCATCGAGTACGCAGGAAAAGAAAAGCAACTTGGAAGAGATGGTTTCACTCTTCATAAAGGAGCATAAGGTTCTTAACGTAAGCCTCCAATCGTCGGTGAACACTTTGGTGACGACCGTGAACAATCATGACATTGCTCTCAAGAATATGGAAGTGCAGATGGGGCAAATTTCAACAACGGTGAACGCCCTTCAGAAGGGTAAATTCCCCAACGATACCGAAGTAAACCCCCGAGAGAAATTCAAGATGATAACGCTCAGAAGTGGGAGACAACTGGAGAACCGCTCGATTGAATTGATGTGGACTTTTCCTAACCGCAAGCGCACGGGTCAAGTAATAATATAG ATGATCGGAGTTTCGACCGACACTATTAGACTGAGGTTGTTCCCATTCTCTCTTCAAGACAAAGCCAAGGACTGGTTGGAATCAGTTGAACCTAGTAGCATTAGTTTGCGCAATAATGAAAAATTTTCTCACTCGAATACTAAGAATGTTTTGCAGCCACCACCGGGATTTGCTTCATCGAGTACGCAGGAAAAGAAAAGCAACTTGGAAGAGATGGTTTCACTCTTCATAAAGGAGCATAAGGTTCTTAACGTAAGCCTCCAATCGTCGGTGAACACTTTGGTGACGACCGTGAACAATCATGACATTGCTCTCAAGAATATGGAAGTGCAGATGGGGCAAATTTCAACAACGGTGAACGCCCTTCAGAAGGGTAAATTCCCCAACGATACCGAAGTAAACCCCCGAGAGAAATTCAAGATGATAACGCTCAGAAGTGGGAGACAACTGGAGAACCGCTCGATTGAATTGATGTGGACTTTTCCTAACCGCAAGCGCACGGGTCAAGTAATAATATAG MIGVSTDTIRLRLFPFSLQDKAKDWLESVEPSSISLRNNEKFSHSNTKNVLQPPPGFASSSTQEKKSNLEEMVSLFIKEHKVLNVSLQSSVNTLVTTVNNHDIALKNMEVQMGQISTTVNALQKGKFPNDTEVNPREKFKMITLRSGRQLENRSIELMWTFPNRKRTGQVII Homology
BLAST of Lag0026197 vs. NCBI nr
Match: XP_023874613.1 (uncharacterized protein LOC111987139 [Quercus suber]) HSP 1 Score: 120.2 bits (300), Expect = 1.8e-23 Identity = 64/134 (47.76%), Postives = 89/134 (66.42%), Query Frame = 0
BLAST of Lag0026197 vs. NCBI nr
Match: XP_023874613.1 (uncharacterized protein LOC111987139 [Quercus suber]) HSP 1 Score: 55.1 bits (131), Expect = 7.1e-04 Identity = 24/35 (68.57%), Postives = 31/35 (88.57%), Query Frame = 0
HSP 2 Score: 119.4 bits (298), Expect = 3.1e-23 Identity = 64/134 (47.76%), Postives = 89/134 (66.42%), Query Frame = 0
BLAST of Lag0026197 vs. NCBI nr
Match: XP_023903214.1 (uncharacterized protein LOC112015077 [Quercus suber]) HSP 1 Score: 55.1 bits (131), Expect = 7.1e-04 Identity = 24/35 (68.57%), Postives = 31/35 (88.57%), Query Frame = 0
HSP 2 Score: 118.2 bits (295), Expect = 6.8e-23 Identity = 64/134 (47.76%), Postives = 89/134 (66.42%), Query Frame = 0
BLAST of Lag0026197 vs. NCBI nr
Match: XP_023929660.1 (uncharacterized protein LOC112040975 [Quercus suber]) HSP 1 Score: 55.1 bits (131), Expect = 7.1e-04 Identity = 24/35 (68.57%), Postives = 31/35 (88.57%), Query Frame = 0
HSP 2 Score: 118.2 bits (295), Expect = 6.8e-23 Identity = 64/134 (47.76%), Postives = 89/134 (66.42%), Query Frame = 0
BLAST of Lag0026197 vs. NCBI nr
Match: XP_023889786.1 (uncharacterized protein LOC112001854 [Quercus suber]) HSP 1 Score: 116.7 bits (291), Expect = 2.0e-22 Identity = 64/131 (48.85%), Postives = 90/131 (68.70%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
|