Lag0026172 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0026172
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	transcription factor bHLH48
Location	chr10: 31295965 .. 31299284 (-)
RNA-Seq Expression	Lag0026172
Synteny	Lag0026172

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGCGATCCTCCTAGGGTAAGATTTGAGCTTGATCCAGAAATCGAAAGGACATTCAGAAGAAGAATGAGAGAGCAGCGAAGAAATCTAAATCCAATGGATAATGTGCCTGAAAGTGTTAATATCTAAAAAGAGGAAGCAATTTTGGATCTTAGGCACATAAGAAGTTCAATTTGATCAATTAAGACATGCTGTTCATATGAAGAAAAACAGAGACAGATTACCAACCTTGTTTCAATGGAGAAATTGGTTGGATTTCCTTCTTGTTTTTCTTCACCAATGAGTCACTAACCACCAAAAGATCTTCCTTGCTATCCTCAAGCCTTTGGAACGGATTGTAGGATCCTCAAGTGATGGAATTTAAGAGAGAAAGCTTGAAGAACAAACATATGGAGGTGGGTTTGGTGAGTATTCAATTTGGCAGCAATTCACTATGTTTCAAGATACTAGAGGTGTTCATCGGTCGGTCAGAGTCGGTTTTGGGCTAAAACCGACACCGACCACCAACATGTCGGTTTTCGGTTGGTCGGTGGTCGATGATTTTGAGACGCTCCATGAAACCGACCGATCAAATACACGGTCGATCGGTCGATTTTGTCGGTTTTGAGATATTGTCAGAAAATGCACGATGTAGAAGAAAAAACGTTCAAAAAGTTGAGAGAGAAAGAAGAGAAAAAGAGTAACATAGGAGAAAAGAAATAAAAACGAAGAAGATAGAAAGATTTGGAGCATTATAAAGAAAAAATGGAAGTTTGGTGAGAAAAAGGAAAGAAAAAGAAAAGAGAGGAAAAGAAGAGGGAAGAAGAAGAGAGAAGAAAAGAGAAAGGAAAGAAGAATAAGGATGGAGAAAATGAGGGAGAAGAAATCAGTGAGGGAGGGAAATGGAAAGAGAAAGAGAAAAGAGAAAGGAAATGAAAGAAGAAGAAATCATGGGGAGGGAAAGAGAAAGAGACAAAGAAAAGAAATAAAAAAGTAATATTTAAAAGTCATTATGACTCTTAAATTGAAAAGACTTCACACAATATTAAAAAAAAAAAAAGAAGAAGAAGAAATCGTGGGGAGGGAAAGAGAAAAAGAGAAAGAAAGGAAATAAAAAAATGTTTTTTAAAAAAGTCATTATGACTCTTAATTTGAAAGAACATTACACAATATTCAAGGAAAAAAAGAAGAAAGGATTGCACACTACATTGTGCAATTTGCATAGAGCATACACAGTGTACAACAGCCTTTTAATCCTCTTTTTTTTTTTCCTTTTTTGATGTGAAAGTCGGTCGGTCGGTTTTTGCTGTTTTTAGTAGATCGACCGACCAACATTAGTTCGGTCGATTTCGGTCGGTCAAGTCGGTTTTCGGTCTAATCTTGAACACCCCTACAAGATACCTTTCTTCAGCAATCTTCTTCCCTTTTATAGAGGGATTAAAGATGAAGGAAAGCCCCAACAATTGACACTCAATCAGCCAAGGAGTAGTGGGAATTTTGGTGTCCAACATGAGGGGAGTGCATGGGTTTAGTCACCATGCACTCCACCTCCAAAAAATCATGTTATGATTTTAATTAAATCAATAATTATCCTAATTTAATTGGATAATTATCCAATTTTCAATAACCTGAAAAATCAAAAATTGAAATTTAATTTTTCAATTTTAAATTAATTGAAAATTAATTTAAAACAAATATTAAATAAATAAGGGAAAAATACACTTTTGGTCCATGAGGTTTGAGTTAAGTTACACTTTGGTCCTTGAGTATTAAAACTCAACAAAAATACCCCTGAGGTTTGAGATAAGTAGCATTTTGGTCCCTGCTGTCTAATTTGCCATTAGATGCTCACAAATTGCTGACATGGCCACATTTTTTTAATTAAAAAAATTATTATTTTTATTTTTAAAATAAAAACAAATAAATATAATAAATATTATTATTTTAAGTTTTTTTTAATCTCTTTCTTCTTCCCCTCTTCTTCATCCTCTTCCCTCCACCCTTTCTTCATCTTCTTCGAATCTCCTTGCCGGCAACCGCACGCCGCCGCCGGCCGCCGGCGACTGTAATTTTTTTTTCCTATTTTCTTACTGTAACTGTAGATTGGCCGCCATTGAAGCACCACCTTTAATTTCCCTTTCCTTCTCATCAATTCATCTTGGGTTTGAATGAAATCACACTTTTCCTTCACACCCAGATTGTATTTCTCTTTGATTCGACTCCATTTCCTCTCTCATCGATCGATTGGCTCTGCAGTCCCACATTTGAGGAGTTGGGTTTTACTGGGAATTTGGGTGGATTGATAGGATTTTCCATTTGGGAATTTGAGGTGGGTTGTTGCTAAATTTGGAACTGATTTGGTGAATTTTGTGAATTTGTGAAGTTGTTGCTGTTGTAAATGAAGATTAAAGTGGGGACTGTGGGTGGATCCAGTCCCATCGGGCGTCAATCAAATGATTCTGGGCTTGAATCGCTTCAATTTGCTAGGAAATTCAGGGGTTGATGACGATTCCGGCGGAAAATGCTAGCTCCTTCACTGCACTTCTGGAACTTCCGGCGACGCAGGCTTTAGAGCTTCTCCACTAGCCGGATTTCGACAGTGGCACCGAACGGCCGTTGTGAACGATGACCCCGTTCACCACCGTATCAAAGATGTGCTGAAACCCTACTTCAGTGCCTTCAATTGCAATTTGACCTTCCCGACGAACTCGACTCTAATCGAACGTGCCACCAAGTTCTCGGTCTTGGCGTTGAATTCGAGCGTCAATTTGGAGAAAGTGAAGAACGAGCCCATCACTGAAACCGATTCGAATCCTAATCACTTGCAGACTTTAATCTTCGATTCGATGGTGGAGAACAACACGAACCAGAGATCGGCAAAGAGGAAGGAGCGAGAGGAAAAGGTAACCAATAATCAATAATTGCAAAAGAAAAAAGAAAAAGAAAACTAGGGTTTGGGTTTCTACCGTACTTTAGCAATTTCCATATCTGAATTTCAATCAATTACAATCTTGAATCGATTTAGGGAAAAGGGTCATCAAAGAAGAGCAAGAACGAAGGCAATGAAGATGCTGAAAAGTTTCCTTACGTTTGGGTTTCTAAGGCTTGATTTTCAATTTTAGTTTAATTAATTGTGATGAATTAACACTTTTCTTTCTTTTGCCTTTTGGTTTCAAAAGCCTAGGAGAGATAAAATCAATGCTCGGATGAAGCTACTTCAAGAACTGGTCCCTAGATGCAATAAGGAGAAGAAAGGAGAAGAAAAGAAAAGAAAAAAAAAGTTACAGTCGCCGGCGGCGACGAGTGGTGGCCGGTTGCCGGTCGCCGGCAAGGAGATTTGA

mRNA sequence

ATGAGCGATCCTCCTAGGGATCCTCAAGTGATGGAATTTAAGAGAGAAAGCTTGAAGAACAAACATATGGAGGTGGGTTTGATTGTATTTCTCTTTGATTCGACTCCATTTCCTCTCTCATCGATCGATTGGCTCTGCAGTCCCACATTTGAGGAGTTGGGTTTTACTGGGAATTTGGGTGGATTGATAGGATTTTCCATTTGGGAATTTGAGCTCCTTCACTGCACTTCTGGAACTTCCGGCGACGCAGGCTTTAGAGCTTCTCCACTAGCCGGATTTCGACAGTGGCACCGAACGGCCGTTGTGAACGATGACCCCGTTCACCACCGTATCAAAGATGTGCTGAAACCCTACTTCAGTGCCTTCAATTGCAATTTGACCTTCCCGACGAACTCGACTCTAATCGAACGTGCCACCAAGTTCTCGGTCTTGGCGTTGAATTCGAGCGTCAATTTGGAGAAAGTGAAGAACGAGCCCATCACTGAAACCGATTCGAATCCTAATCACTTGCAGACTTTAATCTTCGATTCGATGGTGGAGAACAACACGAACCAGAGATCGGCAAAGAGGAAGGAGCGAGAGGAAAAGGGAAAAGGGTCATCAAAGAAGAGCAAGAACGAAGGCAATGAAGATGCTGAAAAGTTTCCTTACGTTTGGCCTAGGAGAGATAAAATCAATGCTCGGATGAAGCTACTTCAAGAACTGGTCCCTAGATGCAATAAGGAGAAGAAAGGAGAAGAAAAGAAAAGAAAAAAAAAGTTACAGTCGCCGGCGGCGACGAGTGGTGGCCGGTTGCCGGTCGCCGGCAAGGAGATTTGA

Coding sequence (CDS)

ATGAGCGATCCTCCTAGGGATCCTCAAGTGATGGAATTTAAGAGAGAAAGCTTGAAGAACAAACATATGGAGGTGGGTTTGATTGTATTTCTCTTTGATTCGACTCCATTTCCTCTCTCATCGATCGATTGGCTCTGCAGTCCCACATTTGAGGAGTTGGGTTTTACTGGGAATTTGGGTGGATTGATAGGATTTTCCATTTGGGAATTTGAGCTCCTTCACTGCACTTCTGGAACTTCCGGCGACGCAGGCTTTAGAGCTTCTCCACTAGCCGGATTTCGACAGTGGCACCGAACGGCCGTTGTGAACGATGACCCCGTTCACCACCGTATCAAAGATGTGCTGAAACCCTACTTCAGTGCCTTCAATTGCAATTTGACCTTCCCGACGAACTCGACTCTAATCGAACGTGCCACCAAGTTCTCGGTCTTGGCGTTGAATTCGAGCGTCAATTTGGAGAAAGTGAAGAACGAGCCCATCACTGAAACCGATTCGAATCCTAATCACTTGCAGACTTTAATCTTCGATTCGATGGTGGAGAACAACACGAACCAGAGATCGGCAAAGAGGAAGGAGCGAGAGGAAAAGGGAAAAGGGTCATCAAAGAAGAGCAAGAACGAAGGCAATGAAGATGCTGAAAAGTTTCCTTACGTTTGGCCTAGGAGAGATAAAATCAATGCTCGGATGAAGCTACTTCAAGAACTGGTCCCTAGATGCAATAAGGAGAAGAAAGGAGAAGAAAAGAAAAGAAAAAAAAAGTTACAGTCGCCGGCGGCGACGAGTGGTGGCCGGTTGCCGGTCGCCGGCAAGGAGATTTGA

Protein sequence

MSDPPRDPQVMEFKRESLKNKHMEVGLIVFLFDSTPFPLSSIDWLCSPTFEELGFTGNLGGLIGFSIWEFELLHCTSGTSGDAGFRASPLAGFRQWHRTAVVNDDPVHHRIKDVLKPYFSAFNCNLTFPTNSTLIERATKFSVLALNSSVNLEKVKNEPITETDSNPNHLQTLIFDSMVENNTNQRSAKRKEREEKGKGSSKKSKNEGNEDAEKFPYVWPRRDKINARMKLLQELVPRCNKEKKGEEKKRKKKLQSPAATSGGRLPVAGKEI

Homology

[Close]

BLAST of Lag0026172 vs. NCBI nr
Match: XP_038906343.1 (transcription factor bHLH48-like [Benincasa hispida])

HSP 1 Score: 201.4 bits (511), Expect = 9.7e-48
Identity = 121/171 (70.76%), Postives = 124/171 (72.51%), Query Frame = 0


Query: 100 AVVNDDPVHHRIKDVLKPYFSAFNCNLTFPTNSTLIERATKFSVLA------------LN 159
           AVVNDD VHH IKDV KPYFSAFNCNLTFPTNS LIERA K SVLA            LN
Sbjct: 73  AVVNDDSVHHCIKDVPKPYFSAFNCNLTFPTNSALIERAAKLSVLAEEHSPETTSSVPLN 132

Query: 160 SSVNLEKVKNEPITETDSNPNHLQTLIFDSMVENNTNQRSAKRKEREEKGKGSSKKSKNE 219
           SSVNLEKVKNEP TETDSNPN LQTLI D  VE N NQRSAKRKERE+KGKGS+KKSKNE
Sbjct: 133 SSVNLEKVKNEPTTETDSNPNPLQTLISDPTVE-NMNQRSAKRKEREKKGKGSTKKSKNE 192

Query: 220 GNEDAEKFPYVW-----------------PRRDKINARMKLLQELVPRCNK 242
            NEDAEK PYV                   RR+KINARMKLLQELVP CNK
Sbjct: 193 SNEDAEKLPYVHVRARRGQATDSHSLAERARREKINARMKLLQELVPGCNK 242

[Close]

BLAST of Lag0026172 vs. NCBI nr
Match: XP_004136583.1 (transcription factor bHLH48 [Cucumis sativus] >KGN59329.1 hypothetical protein Csa_001632 [Cucumis sativus])

HSP 1 Score: 201.1 bits (510), Expect = 1.3e-47
Identity = 120/171 (70.18%), Postives = 125/171 (73.10%), Query Frame = 0


Query: 100 AVVNDDPVHHRIKDVLKPYFSAFNCNLTFPTNSTLIERATKFSVLA------------LN 159
           AVVNDD VHH IKDV KPYFSAFNCNLTFPTNS LIER TK SVLA            LN
Sbjct: 70  AVVNDDSVHHCIKDVPKPYFSAFNCNLTFPTNSGLIERVTKLSVLAKEHSPETTSSVPLN 129

Query: 160 SSVNLEKVKNEPITETDSNPNHLQTLIFDSMVENNTNQRSAKRKEREEKGKGSSKKSKNE 219
           SSVNLEKVKNEP T+TDSNPN LQTLI D  VE NTNQRSAKRKERE+KG+GS+KKSKNE
Sbjct: 130 SSVNLEKVKNEPTTDTDSNPNPLQTLISDPTVE-NTNQRSAKRKEREKKGRGSTKKSKNE 189

Query: 220 GNEDAEKFPYVW-----------------PRRDKINARMKLLQELVPRCNK 242
            NEDAEK PYV                   RR+KINARMKLLQELVP CNK
Sbjct: 190 SNEDAEKLPYVHVRARRGQATDSHSLAERARREKINARMKLLQELVPGCNK 239

[Close]

BLAST of Lag0026172 vs. NCBI nr
Match: XP_008443095.1 (PREDICTED: transcription factor bHLH48 [Cucumis melo] >KAA0043709.1 transcription factor bHLH48 [Cucumis melo var. makuwa] >TYK25425.1 transcription factor bHLH48 [Cucumis melo var. makuwa])

HSP 1 Score: 199.1 bits (505), Expect = 4.8e-47
Identity = 118/171 (69.01%), Postives = 124/171 (72.51%), Query Frame = 0


Query: 100 AVVNDDPVHHRIKDVLKPYFSAFNCNLTFPTNSTLIERATKFSVLA------------LN 159
           AVVNDD VHH IKDV KPYFSAFNCNLTFPTNS LIER TK S+LA            LN
Sbjct: 70  AVVNDDSVHHCIKDVPKPYFSAFNCNLTFPTNSGLIERVTKLSILAKEHSPETTSSVPLN 129

Query: 160 SSVNLEKVKNEPITETDSNPNHLQTLIFDSMVENNTNQRSAKRKEREEKGKGSSKKSKNE 219
           SSVN EKVKNEP T+TDSNPN LQTLI D  VE NTNQRSAKRKERE+KG+GS+KKSKNE
Sbjct: 130 SSVNFEKVKNEPTTDTDSNPNPLQTLISDPKVE-NTNQRSAKRKEREKKGRGSTKKSKNE 189

Query: 220 GNEDAEKFPYVW-----------------PRRDKINARMKLLQELVPRCNK 242
            NEDAEK PYV                   RR+KINARMKLLQELVP CNK
Sbjct: 190 SNEDAEKLPYVHVRARRGQATDSHSLAERARREKINARMKLLQELVPGCNK 239

[Close]

BLAST of Lag0026172 vs. NCBI nr
Match: KAG6596223.1 (Transcription factor basic helix-loop-helix 60, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 188.0 bits (476), Expect = 1.1e-43
Identity = 111/169 (65.68%), Postives = 117/169 (69.23%), Query Frame = 0


Query: 101 VVNDDPVHHRIKDVLKPYFSAFNCNLTFPTNSTLIERATKFSVLA-----------LNSS 160
           V  DD VH+R+KDV KPYFSA NCNLTFPTNS L E   KFSV+A           LNSS
Sbjct: 69  VKKDDSVHYRVKDVPKPYFSALNCNLTFPTNSPLNEHDAKFSVVAEHSPETTSSVPLNSS 128

Query: 161 VNLEKVKNEPITETDSNPNHLQTLIFDSMVENNTNQRSAKRKEREEKGKGSSKKSKNEGN 220
           V+LEKVKNEP  ETDSNPNHL   I D  VENNTNQRSAKRKERE+KGKGSSKKSKNE  
Sbjct: 129 VSLEKVKNEPTIETDSNPNHLYPKISDPTVENNTNQRSAKRKEREKKGKGSSKKSKNESQ 188

Query: 221 EDAEKFPYVW-----------------PRRDKINARMKLLQELVPRCNK 242
           EDAEK PYV                   RR+KINARMKLLQELVP CNK
Sbjct: 189 EDAEKLPYVHVRAGRGQATDKHSLAERARREKINARMKLLQELVPGCNK 237

[Close]

BLAST of Lag0026172 vs. NCBI nr
Match: XP_022931797.1 (transcription factor bHLH48-like [Cucurbita moschata])

HSP 1 Score: 186.0 bits (471), Expect = 4.2e-43
Identity = 110/170 (64.71%), Postives = 116/170 (68.24%), Query Frame = 0


Query: 101 VVNDDPVHHRIKDVLKPYFSAFNCNLTFPTNSTLIERATKFSVLA------------LNS 160
           V  DD VH+R+KDV KPYFSA NCNLTFPTNS L E   KFSV+A            LNS
Sbjct: 69  VKKDDSVHYRVKDVPKPYFSALNCNLTFPTNSPLNEHDAKFSVVAEEHSPETTSSVPLNS 128

Query: 161 SVNLEKVKNEPITETDSNPNHLQTLIFDSMVENNTNQRSAKRKEREEKGKGSSKKSKNEG 220
           SV+LEKVKNEP  ETDSNPNHL   I D  VENNTNQRS KRKERE+KGKGSSKKSKNE 
Sbjct: 129 SVSLEKVKNEPTIETDSNPNHLYPKISDPTVENNTNQRSVKRKEREKKGKGSSKKSKNES 188

Query: 221 NEDAEKFPYVW-----------------PRRDKINARMKLLQELVPRCNK 242
            EDAEK PYV                   RR+KINARMKLLQELVP CNK
Sbjct: 189 QEDAEKLPYVHVRAGRGQATDKHSLAERARREKINARMKLLQELVPGCNK 238

[Close]

BLAST of Lag0026172 vs. ExPASy Swiss-Prot
Match: Q3EAI1 (Transcription factor bHLH60 OS=Arabidopsis thaliana OX=3702 GN=BHLH60 PE=1 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 2.8e-18
Identity = 73/167 (43.71%), Postives = 92/167 (55.09%), Query Frame = 0


Query: 115 LKPYFSAFNCNLTFPTNSTLIERATKFSVLAL------------------NSSVNLEKVK 174
           + P   +F   L FP+NS L+ERA +FSV+A                   NSS NL++VK
Sbjct: 83  IPPPLHSFGGTLAFPSNSVLMERAARFSVIATEQQNGNISGETPTSSVPSNSSANLDRVK 142

Query: 175 NEPITETDSNPNHLQTLIFDSMVEN-----NTNQRSAKRKEREEKGKGSSKKSKNEGNED 234
            EP  ETDS+    Q LI DS +EN     N N R+ KRK+ E+KGK S+K  KN+ +E+
Sbjct: 143 TEP-AETDSS----QRLISDSAIENQIPCPNQNNRNGKRKDFEKKGKSSTK--KNKSSEE 202

Query: 235 AEKFPYVW-----------------PRRDKINARMKLLQELVPRCNK 242
            EK PYV                   RR+KINARMKLLQELVP C+K
Sbjct: 203 NEKLPYVHVRARRGQATDSHSLAERARREKINARMKLLQELVPGCDK 242

[Close]

BLAST of Lag0026172 vs. ExPASy Swiss-Prot
Match: Q8VZ02 (Transcription factor bHLH48 OS=Arabidopsis thaliana OX=3702 GN=BHLH48 PE=2 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 1.0e-12
Identity = 64/150 (42.67%), Postives = 81/150 (54.00%), Query Frame = 0


Query: 126 LTFPTNSTLIERATKFSVLAL----------------NSSVNLEKVKNEPITETDSNPNH 185
           LTFP+NS L++RA +FSV+A                 N   NL++VK EP  ET      
Sbjct: 89  LTFPSNSLLLDRAARFSVIATEQNGNFSGETANSLPSNPGANLDRVKAEP-AET------ 148

Query: 186 LQTLIFDSMVEN-NTNQRSAKRKEREEKGKGSSKKSKNEGNEDAEKFPYVW--------- 242
                 DSMVEN N +  S KRKERE+K K S+K  KN+ + +++K PYV          
Sbjct: 149 ------DSMVENQNQSYSSGKRKEREKKVKSSTK--KNKSSVESDKLPYVHVRARRGQAT 208

[Close]

BLAST of Lag0026172 vs. ExPASy TrEMBL
Match: A0A0A0LEI6 (BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G810530 PE=4 SV=1)

HSP 1 Score: 201.1 bits (510), Expect = 6.1e-48
Identity = 120/171 (70.18%), Postives = 125/171 (73.10%), Query Frame = 0


Query: 100 AVVNDDPVHHRIKDVLKPYFSAFNCNLTFPTNSTLIERATKFSVLA------------LN 159
           AVVNDD VHH IKDV KPYFSAFNCNLTFPTNS LIER TK SVLA            LN
Sbjct: 70  AVVNDDSVHHCIKDVPKPYFSAFNCNLTFPTNSGLIERVTKLSVLAKEHSPETTSSVPLN 129

Query: 160 SSVNLEKVKNEPITETDSNPNHLQTLIFDSMVENNTNQRSAKRKEREEKGKGSSKKSKNE 219
           SSVNLEKVKNEP T+TDSNPN LQTLI D  VE NTNQRSAKRKERE+KG+GS+KKSKNE
Sbjct: 130 SSVNLEKVKNEPTTDTDSNPNPLQTLISDPTVE-NTNQRSAKRKEREKKGRGSTKKSKNE 189

Query: 220 GNEDAEKFPYVW-----------------PRRDKINARMKLLQELVPRCNK 242
            NEDAEK PYV                   RR+KINARMKLLQELVP CNK
Sbjct: 190 SNEDAEKLPYVHVRARRGQATDSHSLAERARREKINARMKLLQELVPGCNK 239

[Close]

BLAST of Lag0026172 vs. ExPASy TrEMBL
Match: A0A5D3DPK9 (Transcription factor bHLH48 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G005680 PE=4 SV=1)

HSP 1 Score: 199.1 bits (505), Expect = 2.3e-47
Identity = 118/171 (69.01%), Postives = 124/171 (72.51%), Query Frame = 0


Query: 100 AVVNDDPVHHRIKDVLKPYFSAFNCNLTFPTNSTLIERATKFSVLA------------LN 159
           AVVNDD VHH IKDV KPYFSAFNCNLTFPTNS LIER TK S+LA            LN
Sbjct: 70  AVVNDDSVHHCIKDVPKPYFSAFNCNLTFPTNSGLIERVTKLSILAKEHSPETTSSVPLN 129

Query: 160 SSVNLEKVKNEPITETDSNPNHLQTLIFDSMVENNTNQRSAKRKEREEKGKGSSKKSKNE 219
           SSVN EKVKNEP T+TDSNPN LQTLI D  VE NTNQRSAKRKERE+KG+GS+KKSKNE
Sbjct: 130 SSVNFEKVKNEPTTDTDSNPNPLQTLISDPKVE-NTNQRSAKRKEREKKGRGSTKKSKNE 189

Query: 220 GNEDAEKFPYVW-----------------PRRDKINARMKLLQELVPRCNK 242
            NEDAEK PYV                   RR+KINARMKLLQELVP CNK
Sbjct: 190 SNEDAEKLPYVHVRARRGQATDSHSLAERARREKINARMKLLQELVPGCNK 239

[Close]

BLAST of Lag0026172 vs. ExPASy TrEMBL
Match: A0A1S3B815 (transcription factor bHLH48 OS=Cucumis melo OX=3656 GN=LOC103486793 PE=4 SV=1)

HSP 1 Score: 199.1 bits (505), Expect = 2.3e-47
Identity = 118/171 (69.01%), Postives = 124/171 (72.51%), Query Frame = 0


Query: 100 AVVNDDPVHHRIKDVLKPYFSAFNCNLTFPTNSTLIERATKFSVLA------------LN 159
           AVVNDD VHH IKDV KPYFSAFNCNLTFPTNS LIER TK S+LA            LN
Sbjct: 70  AVVNDDSVHHCIKDVPKPYFSAFNCNLTFPTNSGLIERVTKLSILAKEHSPETTSSVPLN 129

Query: 160 SSVNLEKVKNEPITETDSNPNHLQTLIFDSMVENNTNQRSAKRKEREEKGKGSSKKSKNE 219
           SSVN EKVKNEP T+TDSNPN LQTLI D  VE NTNQRSAKRKERE+KG+GS+KKSKNE
Sbjct: 130 SSVNFEKVKNEPTTDTDSNPNPLQTLISDPKVE-NTNQRSAKRKEREKKGRGSTKKSKNE 189

Query: 220 GNEDAEKFPYVW-----------------PRRDKINARMKLLQELVPRCNK 242
            NEDAEK PYV                   RR+KINARMKLLQELVP CNK
Sbjct: 190 SNEDAEKLPYVHVRARRGQATDSHSLAERARREKINARMKLLQELVPGCNK 239

[Close]

BLAST of Lag0026172 vs. ExPASy TrEMBL
Match: A0A6J1EUQ6 (transcription factor bHLH48-like OS=Cucurbita moschata OX=3662 GN=LOC111438040 PE=4 SV=1)

HSP 1 Score: 186.0 bits (471), Expect = 2.0e-43
Identity = 110/170 (64.71%), Postives = 116/170 (68.24%), Query Frame = 0


Query: 101 VVNDDPVHHRIKDVLKPYFSAFNCNLTFPTNSTLIERATKFSVLA------------LNS 160
           V  DD VH+R+KDV KPYFSA NCNLTFPTNS L E   KFSV+A            LNS
Sbjct: 69  VKKDDSVHYRVKDVPKPYFSALNCNLTFPTNSPLNEHDAKFSVVAEEHSPETTSSVPLNS 128

Query: 161 SVNLEKVKNEPITETDSNPNHLQTLIFDSMVENNTNQRSAKRKEREEKGKGSSKKSKNEG 220
           SV+LEKVKNEP  ETDSNPNHL   I D  VENNTNQRS KRKERE+KGKGSSKKSKNE 
Sbjct: 129 SVSLEKVKNEPTIETDSNPNHLYPKISDPTVENNTNQRSVKRKEREKKGKGSSKKSKNES 188

Query: 221 NEDAEKFPYVW-----------------PRRDKINARMKLLQELVPRCNK 242
            EDAEK PYV                   RR+KINARMKLLQELVP CNK
Sbjct: 189 QEDAEKLPYVHVRAGRGQATDKHSLAERARREKINARMKLLQELVPGCNK 238

[Close]

BLAST of Lag0026172 vs. ExPASy TrEMBL
Match: A0A6J1J6J4 (transcription factor bHLH48 OS=Cucurbita maxima OX=3661 GN=LOC111481679 PE=4 SV=1)

HSP 1 Score: 169.5 bits (428), Expect = 2.0e-38
Identity = 107/167 (64.07%), Postives = 113/167 (67.66%), Query Frame = 0


Query: 100 AVVNDDPVHHRIKDVLKPYFSAFNCNLTFPTNSTLIERATKFSVLALNSS--------VN 159
           AVV DD        V KPYFSAFNCNLTFPTNS LIERA KFSVLA   S        +N
Sbjct: 73  AVVTDD-------SVPKPYFSAFNCNLTFPTNSALIERAAKFSVLAEEDSPDTTSKVALN 132

Query: 160 LEKVKNEPITETDSNPNHLQTLIFDSMVENNTNQRSAKRKEREEKGKGSSKKSKNEGNED 219
           LEKVKNEP TETDSNPN LQTLI D  VE NTNQR  KRKERE+KGKGS+KKSKNE +E 
Sbjct: 133 LEKVKNEPTTETDSNPNPLQTLISDPAVE-NTNQRPTKRKEREKKGKGSTKKSKNESSEA 192

Query: 220 AEKFPYVW-----------------PRRDKINARMKLLQELVPRCNK 242
           AEK PY+                   RR+KINARMKLLQELVP CNK
Sbjct: 193 AEKLPYIHVRARRGQATDSHSLAERARREKINARMKLLQELVPGCNK 231

[Close]

BLAST of Lag0026172 vs. TAIR 10
Match: AT3G57800.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 94.0 bits (232), Expect = 2.0e-19
Identity = 73/167 (43.71%), Postives = 92/167 (55.09%), Query Frame = 0


Query: 115 LKPYFSAFNCNLTFPTNSTLIERATKFSVLAL------------------NSSVNLEKVK 174
           + P   +F   L FP+NS L+ERA +FSV+A                   NSS NL++VK
Sbjct: 83  IPPPLHSFGGTLAFPSNSVLMERAARFSVIATEQQNGNISGETPTSSVPSNSSANLDRVK 142

Query: 175 NEPITETDSNPNHLQTLIFDSMVEN-----NTNQRSAKRKEREEKGKGSSKKSKNEGNED 234
            EP  ETDS+    Q LI DS +EN     N N R+ KRK+ E+KGK S+K  KN+ +E+
Sbjct: 143 TEP-AETDSS----QRLISDSAIENQIPCPNQNNRNGKRKDFEKKGKSSTK--KNKSSEE 202

Query: 235 AEKFPYVW-----------------PRRDKINARMKLLQELVPRCNK 242
            EK PYV                   RR+KINARMKLLQELVP C+K
Sbjct: 203 NEKLPYVHVRARRGQATDSHSLAERARREKINARMKLLQELVPGCDK 242

[Close]

BLAST of Lag0026172 vs. TAIR 10
Match: AT3G57800.2 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 94.0 bits (232), Expect = 2.0e-19
Identity = 73/167 (43.71%), Postives = 92/167 (55.09%), Query Frame = 0


Query: 115 LKPYFSAFNCNLTFPTNSTLIERATKFSVLAL------------------NSSVNLEKVK 174
           + P   +F   L FP+NS L+ERA +FSV+A                   NSS NL++VK
Sbjct: 83  IPPPLHSFGGTLAFPSNSVLMERAARFSVIATEQQNGNISGETPTSSVPSNSSANLDRVK 142

Query: 175 NEPITETDSNPNHLQTLIFDSMVEN-----NTNQRSAKRKEREEKGKGSSKKSKNEGNED 234
            EP  ETDS+    Q LI DS +EN     N N R+ KRK+ E+KGK S+K  KN+ +E+
Sbjct: 143 TEP-AETDSS----QRLISDSAIENQIPCPNQNNRNGKRKDFEKKGKSSTK--KNKSSEE 202

Query: 235 AEKFPYVW-----------------PRRDKINARMKLLQELVPRCNK 242
            EK PYV                   RR+KINARMKLLQELVP C+K
Sbjct: 203 NEKLPYVHVRARRGQATDSHSLAERARREKINARMKLLQELVPGCDK 242

[Close]

BLAST of Lag0026172 vs. TAIR 10
Match: AT2G42300.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 75.5 bits (184), Expect = 7.5e-14
Identity = 64/150 (42.67%), Postives = 81/150 (54.00%), Query Frame = 0


Query: 126 LTFPTNSTLIERATKFSVLAL----------------NSSVNLEKVKNEPITETDSNPNH 185
           LTFP+NS L++RA +FSV+A                 N   NL++VK EP  ET      
Sbjct: 89  LTFPSNSLLLDRAARFSVIATEQNGNFSGETANSLPSNPGANLDRVKAEP-AET------ 148

Query: 186 LQTLIFDSMVEN-NTNQRSAKRKEREEKGKGSSKKSKNEGNEDAEKFPYVW--------- 242
                 DSMVEN N +  S KRKERE+K K S+K  KN+ + +++K PYV          
Sbjct: 149 ------DSMVENQNQSYSSGKRKEREKKVKSSTK--KNKSSVESDKLPYVHVRARRGQAT 208

[Close]

BLAST of Lag0026172 vs. TAIR 10
Match: AT2G42300.2 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 75.1 bits (183), Expect = 9.7e-14
Identity = 65/154 (42.21%), Postives = 82/154 (53.25%), Query Frame = 0


Query: 126 LTFPTNSTLIERATKFSVLAL----------------NSSVNLEKVKNEPITETDSNPNH 185
           LTFP+NS L++RA +FSV+A                 N   NL++VK EP  ET      
Sbjct: 89  LTFPSNSLLLDRAARFSVIATEQNGNFSGETANSLPSNPGANLDRVKAEP-AET------ 148

Query: 186 LQTLIFDSMVEN-NTNQRSAKRKEREEKGKGSSKKSKNEGNEDAEKFPYVW--------- 245
                 DSMVEN N +  S KRKERE+K K S+K  KN+ + +++K PYV          
Sbjct: 149 ------DSMVENQNQSYSSGKRKEREKKVKSSTK--KNKSSVESDKLPYVHVRARRGQAT 208

The following BLAST results are available for this feature:

BLAST of Lag0026172 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038906343.1	9.7e-48	70.76	transcription factor bHLH48-like [Benincasa hispida]	[more]
XP_004136583.1	1.3e-47	70.18	transcription factor bHLH48 [Cucumis sativus] >KGN59329.1 hypothetical protein C...	[more]
XP_008443095.1	4.8e-47	69.01	PREDICTED: transcription factor bHLH48 [Cucumis melo] >KAA0043709.1 transcriptio...	[more]
KAG6596223.1	1.1e-43	65.68	Transcription factor basic helix-loop-helix 60, partial [Cucurbita argyrosperma ...	[more]
XP_022931797.1	4.2e-43	64.71	transcription factor bHLH48-like [Cucurbita moschata]	[more]

BLAST of Lag0026172 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q3EAI1	2.8e-18	43.71	Transcription factor bHLH60 OS=Arabidopsis thaliana OX=3702 GN=BHLH60 PE=1 SV=1	[more]
Q8VZ02	1.0e-12	42.67	Transcription factor bHLH48 OS=Arabidopsis thaliana OX=3702 GN=BHLH48 PE=2 SV=1	[more]

BLAST of Lag0026172 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LEI6	6.1e-48	70.18	BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G810530 PE=4 S...	[more]
A0A5D3DPK9	2.3e-47	69.01	Transcription factor bHLH48 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf...	[more]
A0A1S3B815	2.3e-47	69.01	transcription factor bHLH48 OS=Cucumis melo OX=3656 GN=LOC103486793 PE=4 SV=1	[more]
A0A6J1EUQ6	2.0e-43	64.71	transcription factor bHLH48-like OS=Cucurbita moschata OX=3662 GN=LOC111438040 P...	[more]
A0A6J1J6J4	2.0e-38	64.07	transcription factor bHLH48 OS=Cucurbita maxima OX=3661 GN=LOC111481679 PE=4 SV=...	[more]

BLAST of Lag0026172 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G57800.1	2.0e-19	43.71	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT3G57800.2	2.0e-19	43.71	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT2G42300.1	7.5e-14	42.67	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT2G42300.2	9.7e-14	42.21	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 185..219
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 174..219
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 234..254
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 234..272
None	No IPR available	PANTHER	PTHR12565:SF112	TRANSCRIPTION FACTOR BHLH60	coord: 131..218 coord: 221..241
IPR024097	Basic helix-loop-helix leucine zipper transcription factor	PANTHER	PTHR12565	STEROL REGULATORY ELEMENT-BINDING PROTEIN	coord: 131..218 coord: 221..241

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0026172.1	Lag0026172.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003700	DNA-binding transcription factor activity