Lag0025802 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0025802
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionPollen Ole e 1 allergen and extensin family protein
Locationchr10: 21136098 .. 21136974 (+)
RNA-Seq ExpressionLag0025802
SyntenyLag0025802
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTTCTCTTAAGCTCTTCATTGTTCCTTTTCTCTTGCTCATGGTTCTTGCAACAACTCAACATGCACAATGCAACATTTTGAAGGCCAAGATCTCTTGCCTTGACTGCCAATCCAACTATGACTTCTCAGGTCTTTGCAAAGCTTTGATTTCTCCATGTATTTACATCTTATGTTGTCGTTCTCATGTTTCTTAATTATTCTAAAATTGCTCATTTACCGTTGCTTGAAATTAAATATGTTTTAATTCACGTGTTTCATTAAATTAATATCTTGATGGGACTTCAATGTTGAATAATATGCATATATGTTCCTGTCTGGACCTAACTCTTTAGTGTGTGGTTTGGAGCAAACAATTTTATAAATATTTTTTTGATGAATGATAAAAAAAGATTAAAAAATAAAAATTTACAGAAGAAAGAAACCAGAAACAGGAACATTATCGATTACTCTACTTCGAATATATTTATTTTTCTTCTAGGAAACATGATCGCGGTAAAGTGCAACAGAGTGAAAAACATAACCGTAGCGATTACCAAAGTGAATGGATCATTTGAAACTAGGCTTCCTTTCGAGGCCTCGAACGACTCCTAAGCAGCAGCTTCGAACTGCGTAGCGAAGCTTGTTGGGGGACCTCACCAGCTCTATGCTGCAAGGAAAGACATGGCTTCCACTGTGATCAAGGCAACCAACTCCAACTTCTTCACCATTGCCACAGCTCTCAAGTTCTCAACATGCAAACAGAACAGAAAGTGCAAAGCTATCAAGGAGTTTATGGCAGATTCAAAGACCATTGATTTGCCTCTGCCACCTGAGTGGGGTCTGCCACCTTCAAGCTACTATCTTCCTGTGCTTCCCATCATAGGCATTCCTTGA

mRNA sequence

ATGGCTTCTCTTAAGCTCTTCATTGTTCCTTTTCTCTTGCTCATGGTTCTTGCAACAACTCAACATGCACAATGCAACATTTTGAAGGCCAAGATCTCTTGCCTTGACTGCCAATCCAACTATGACTTCTCAGCAGCTTCGAACTGCGTAGCGAAGCTTGTTGGGGGACCTCACCAGCTCTATGCTGCAAGGAAAGACATGGCTTCCACTGTGATCAAGGCAACCAACTCCAACTTCTTCACCATTGCCACAGCTCTCAAGTTCTCAACATGCAAACAGAACAGAAAGTGCAAAGCTATCAAGGAGTTTATGGCAGATTCAAAGACCATTGATTTGCCTCTGCCACCTGAGTGGGGTCTGCCACCTTCAAGCTACTATCTTCCTGTGCTTCCCATCATAGGCATTCCTTGA

Coding sequence (CDS)

ATGGCTTCTCTTAAGCTCTTCATTGTTCCTTTTCTCTTGCTCATGGTTCTTGCAACAACTCAACATGCACAATGCAACATTTTGAAGGCCAAGATCTCTTGCCTTGACTGCCAATCCAACTATGACTTCTCAGCAGCTTCGAACTGCGTAGCGAAGCTTGTTGGGGGACCTCACCAGCTCTATGCTGCAAGGAAAGACATGGCTTCCACTGTGATCAAGGCAACCAACTCCAACTTCTTCACCATTGCCACAGCTCTCAAGTTCTCAACATGCAAACAGAACAGAAAGTGCAAAGCTATCAAGGAGTTTATGGCAGATTCAAAGACCATTGATTTGCCTCTGCCACCTGAGTGGGGTCTGCCACCTTCAAGCTACTATCTTCCTGTGCTTCCCATCATAGGCATTCCTTGA

Protein sequence

MASLKLFIVPFLLLMVLATTQHAQCNILKAKISCLDCQSNYDFSAASNCVAKLVGGPHQLYAARKDMASTVIKATNSNFFTIATALKFSTCKQNRKCKAIKEFMADSKTIDLPLPPEWGLPPSSYYLPVLPIIGIP
Homology
[Close]
BLAST of Lag0025802 vs. NCBI nr
Match: XP_022967108.1 (uncharacterized protein LOC111466611 [Cucurbita maxima])

HSP 1 Score: 204.9 bits (520), Expect = 4.4e-49
Identity = 110/176 (62.50%), Postives = 119/176 (67.61%), Query Frame = 0 

Query: 1   MASLKLFIVPFLLLMVLATTQHAQCNILKAKISCLDCQSNYDFS---------------- 60
           MASLKLFI+ FLLLM+LA TQ AQCN LKA ISCLDCQSNYDFS                
Sbjct: 1   MASLKLFIIAFLLLMILARTQLAQCNTLKANISCLDCQSNYDFSGNMIVVNCKNVKNLSV 60

Query: 61  ------------------------AASNCVAKLVGGPHQLYAARKDMASTVIKATNSNFF 120
                                   A SNC+AKL+GGPHQLYA+RK MAS VIK TNSNFF
Sbjct: 61  AITEANGSFKTTLPSDTFSDDSKAAPSNCIAKLIGGPHQLYASRKGMASRVIKGTNSNFF 120

Query: 121 TIATALKFSTCKQNRKCKAIKEFMADSKTIDLPLPPEWGLPPSSYYLPVLPIIGIP 137
           T+A AL FSTCK N KC +IK F+ADSKTIDLPLPPEWG PP+SYY PVLPIIGIP
Sbjct: 121 TLANALTFSTCKHNTKCLSIKNFVADSKTIDLPLPPEWGFPPTSYYFPVLPIIGIP 176

[Close]
BLAST of Lag0025802 vs. NCBI nr
Match: XP_023542373.1 (uncharacterized protein LOC111802294 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 204.9 bits (520), Expect = 4.4e-49
Identity = 111/176 (63.07%), Postives = 119/176 (67.61%), Query Frame = 0 

Query: 1   MASLKLFIVPFLLLMVLATTQHAQCNILKAKISCLDCQSNYDFS---------------- 60
           MASLKLFI+ FLLLMVLA TQ AQCN LKA ISCLDCQSNYDFS                
Sbjct: 1   MASLKLFIIAFLLLMVLARTQLAQCNTLKANISCLDCQSNYDFSGNMIVVNCKNVKNLSV 60

Query: 61  ------------------------AASNCVAKLVGGPHQLYAARKDMASTVIKATNSNFF 120
                                   A SNC+AKL GGPHQLYA+RK M+STVIK TNSNFF
Sbjct: 61  AITEANGSFKTTLPSDMASDDSEAAPSNCIAKLTGGPHQLYASRKGMSSTVIKRTNSNFF 120

Query: 121 TIATALKFSTCKQNRKCKAIKEFMADSKTIDLPLPPEWGLPPSSYYLPVLPIIGIP 137
           T+A AL FSTCK N KC +IK F+ADSKTIDLPLPPEWG PP+SYY PVLPIIGIP
Sbjct: 121 TLANALTFSTCKHNTKCLSIKNFVADSKTIDLPLPPEWGFPPTSYYFPVLPIIGIP 176

[Close]
BLAST of Lag0025802 vs. NCBI nr
Match: KAG6573632.1 (hypothetical protein SDJN03_27519, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 202.2 bits (513), Expect = 2.8e-48
Identity = 109/176 (61.93%), Postives = 118/176 (67.05%), Query Frame = 0 

Query: 1   MASLKLFIVPFLLLMVLATTQHAQCNILKAKISCLDCQSNYDFS---------------- 60
           MASLKLFI+ FLL +VLA TQ AQCN LKA ISCLDCQSNYDFS                
Sbjct: 1   MASLKLFIIAFLLFIVLARTQLAQCNTLKANISCLDCQSNYDFSGNMIEVNCKNVKNLSI 60

Query: 61  ------------------------AASNCVAKLVGGPHQLYAARKDMASTVIKATNSNFF 120
                                   A SNC+AKL+GGPHQLYA+RK MAS VIK TNSNFF
Sbjct: 61  AITEANGSFKTTLPSNAASDDSETAPSNCIAKLIGGPHQLYASRKGMASRVIKGTNSNFF 120

Query: 121 TIATALKFSTCKQNRKCKAIKEFMADSKTIDLPLPPEWGLPPSSYYLPVLPIIGIP 137
           T+A AL FSTCK N KC +IK F+ADSKTIDLPLPPEWG PP+SYY PVLPIIGIP
Sbjct: 121 TLANALTFSTCKHNTKCLSIKNFVADSKTIDLPLPPEWGFPPTSYYFPVLPIIGIP 176

[Close]
BLAST of Lag0025802 vs. NCBI nr
Match: XP_022945542.1 (uncharacterized protein LOC111449745 [Cucurbita moschata])

HSP 1 Score: 202.2 bits (513), Expect = 2.8e-48
Identity = 109/176 (61.93%), Postives = 118/176 (67.05%), Query Frame = 0 

Query: 1   MASLKLFIVPFLLLMVLATTQHAQCNILKAKISCLDCQSNYDFS---------------- 60
           MASLKLFI+ FLL +VLA TQ AQCN LKA ISCLDCQSNYDFS                
Sbjct: 1   MASLKLFIIAFLLFIVLARTQLAQCNTLKASISCLDCQSNYDFSGNMVEVNCKNVKNLSI 60

Query: 61  ------------------------AASNCVAKLVGGPHQLYAARKDMASTVIKATNSNFF 120
                                   A SNC+AKL+GGPHQLYA+RK MAS VIK TNSNFF
Sbjct: 61  AITEANGSFKTTLPSNAASDDSETAPSNCIAKLIGGPHQLYASRKGMASRVIKGTNSNFF 120

Query: 121 TIATALKFSTCKQNRKCKAIKEFMADSKTIDLPLPPEWGLPPSSYYLPVLPIIGIP 137
           T+A AL FSTCK N KC +IK F+ADSKTIDLPLPPEWG PP+SYY PVLPIIGIP
Sbjct: 121 TLANALTFSTCKHNTKCLSIKNFVADSKTIDLPLPPEWGFPPTSYYFPVLPIIGIP 176

[Close]
BLAST of Lag0025802 vs. NCBI nr
Match: XP_022142556.1 (uncharacterized protein LOC111012639 [Momordica charantia])

HSP 1 Score: 198.0 bits (502), Expect = 5.3e-47
Identity = 112/176 (63.64%), Postives = 124/176 (70.45%), Query Frame = 0 

Query: 1   MASLKLFI-VPFLLLMVLATTQHAQCNILKAKISCLDCQSNYDFSA-------------- 60
           MASLKL + +PFLLLMVLATTQ AQC  L+AKISCLDC+SNYDFS               
Sbjct: 1   MASLKLLLTLPFLLLMVLATTQAAQCYTLRAKISCLDCRSNYDFSGNKIVVKCEKVKNLA 60

Query: 61  ------------------------ASNCVAKLVGGPHQLYAARKDMASTVIKATNSNFFT 120
                                    SNC+AKLVGGPHQLYA+RKDMAS VIKATNS FFT
Sbjct: 61  VAITRTDGSFETTLPSDASNSQSPPSNCIAKLVGGPHQLYASRKDMASIVIKATNSKFFT 120

Query: 121 IATALKFSTCKQNRKCKAIK-EFMADSKTIDLPLPPEWGLPPSSYYLPVLPIIGIP 137
           IATALKFSTCKQ+ KC+A+K +F+ADSKT+DLPLP EWGL PSSYYLP LPIIGIP
Sbjct: 121 IATALKFSTCKQHNKCQAMKDQFIADSKTVDLPLPREWGLAPSSYYLPELPIIGIP 176

The following BLAST results are available for this feature:
BLAST of Lag0025802 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022967108.14.4e-4962.50uncharacterized protein LOC111466611 [Cucurbita maxima][more]
XP_023542373.14.4e-4963.07uncharacterized protein LOC111802294 [Cucurbita pepo subsp. pepo][more]
KAG6573632.12.8e-4861.93hypothetical protein SDJN03_27519, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_022945542.12.8e-4861.93uncharacterized protein LOC111449745 [Cucurbita moschata][more]
XP_022142556.15.3e-4763.64uncharacterized protein LOC111012639 [Momordica charantia][more]
BLAST of Lag0025802 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0025802.1Lag0025802.1mRNA