Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCTGCCGGAGGATTCTCCGCCGTGAGTAAGAACGGCGGCACCGAGTTCGAGGCCAAAATCACTCCGATCGTCGTCATTTCCTGTGTGATGGCGGCCACCGGCGGCCTCATGTTCGGCTACGACGTCGGTGTCTCAGGTCACTACTGAAACCTTCTCTCTCTCTCTTATAGATCGAAAAACAGCACATCACAGTATATGTATATATAAATCTTGTTACGGTTTCAGTTGACAGGAATCAGGACGACATTTGTTTCTGATTTTGATGAAATGAAATTAACATCGTTACACTCTGAATTCATATCTTCTCGAATCTTCGTACAGAGTGATTTCGTGGTCATTTCTGCAAATCCTCGATTTCTTGGCCATAATTACGATTGATTGTGTATTTCTGTAATGACGATGCGATGTACTCGATTAATATATACCAGTCGTGTTCTTGTGGTTTGATCAATTTTTGGTTAATCGAATTCTGAACCTATGGCCATTACGATTGATCGAGTGTTCTGTATAATGACGATTTGCTTGATTACCTTAACACTAGGCCTTATTATGTTTCTTTCATTTCGATCGATTTTTGGTTAATCGATGAACGCAGGAGGAGTTACTTCGATGCCGGATTTCTTGAAAAAGTTCTTTCCGGTGGTTTACCGGAAGACACAGCTGAAGGAAGAAATTGATAGCAACTACTGTAAATACGATAATCAAGGCCTTCAGTTATTTACATCGTCGCTGTATTTGGCTGGTTTAACGGCGACTTTCTTTGCTTCCTACACCACCAGGAAGCTTGGAAGAAGGTTAACGATGTTGATTGCCGGCGTCTTCTTTATTATCGGAACTGTTCTTAATGCGACAGCTGAAAACCTCGCCATGCTCATCGTCGGCAGAATCTCGCTCGGCTGTGGGGTTGGCTTCGCTAATCAGGTATATTTACAAGTTTTGATTGGCACTAGATGGTGGGTTGGTGGAATAAACAAACATCTAAATTGCGTCATCTTTGAAAAAAAATATATAAATCCATGTTTTGTCAAAAGAAAGAATAAAGAAATATGTAAAAAATAAATAAACAAATAAAAAAGAAAGAAGAAAAGGCGAGAATAAGAAATAGTATTTCGCTCCAAAGTCCAAACATTATTTTGTAGGTTAAATTATAAATATATATTATTGTAGTGTTTTGTGTCTAATAAATCTAATATTTTAAAATTTTTATTATCCATGAATTTGTGTTGTGTGGCTATATTTAAATCTTTGTCATTAACACAATTAATTTTATGTCAACATCTCTAAATTTGAATAGACTAATGAATATGTTACGTTGACATTTCGTCAATAG
mRNA sequence
ATGCCTGCCGGAGGATTCTCCGCCGTGAGTAAGAACGGCGGCACCGAGTTCGAGGCCAAAATCACTCCGATCGTCGTCATTTCCTGTGTGATGGCGGCCACCGGCGGCCTCATGTTCGGCTACGACGTCGGTGTCTCAGGAGGAGTTACTTCGATGCCGGATTTCTTGAAAAAGTTCTTTCCGGTGGTTTACCGGAAGACACAGCTGAAGGAAGAAATTGATAGCAACTACTGTAAATACGATAATCAAGGCCTTCAGTTATTTACATCGTCGCTGTATTTGGCTGGTTTAACGGCGACTTTCTTTGCTTCCTACACCACCAGGAAGCTTGGAAGAAGGTTAACGATGTTGATTGCCGGCGTCTTCTTTATTATCGGAACTGTTCTTAATGCGACAGCTGAAAACCTCGCCATGCTCATCGTCGGCAGAATCTCGCTCGGCTGTGGGGTTGGCTTCGCTAATCAGACTAATGAATATGTTACGTTGACATTTCGTCAATAG
Coding sequence (CDS)
ATGCCTGCCGGAGGATTCTCCGCCGTGAGTAAGAACGGCGGCACCGAGTTCGAGGCCAAAATCACTCCGATCGTCGTCATTTCCTGTGTGATGGCGGCCACCGGCGGCCTCATGTTCGGCTACGACGTCGGTGTCTCAGGAGGAGTTACTTCGATGCCGGATTTCTTGAAAAAGTTCTTTCCGGTGGTTTACCGGAAGACACAGCTGAAGGAAGAAATTGATAGCAACTACTGTAAATACGATAATCAAGGCCTTCAGTTATTTACATCGTCGCTGTATTTGGCTGGTTTAACGGCGACTTTCTTTGCTTCCTACACCACCAGGAAGCTTGGAAGAAGGTTAACGATGTTGATTGCCGGCGTCTTCTTTATTATCGGAACTGTTCTTAATGCGACAGCTGAAAACCTCGCCATGCTCATCGTCGGCAGAATCTCGCTCGGCTGTGGGGTTGGCTTCGCTAATCAGACTAATGAATATGTTACGTTGACATTTCGTCAATAG
Protein sequence
MPAGGFSAVSKNGGTEFEAKITPIVVISCVMAATGGLMFGYDVGVSGGVTSMPDFLKKFFPVVYRKTQLKEEIDSNYCKYDNQGLQLFTSSLYLAGLTATFFASYTTRKLGRRLTMLIAGVFFIIGTVLNATAENLAMLIVGRISLGCGVGFANQTNEYVTLTFRQ
Homology
BLAST of Lag0021279 vs. NCBI nr
Match:
XP_038883579.1 (sugar transport protein 13-like [Benincasa hispida])
HSP 1 Score: 298.1 bits (762), Expect = 4.6e-77
Identity = 151/155 (97.42%), Postives = 152/155 (98.06%), Query Frame = 0
Query: 1 MPAGGFSAVSKNGGTEFEAKITPIVVISCVMAATGGLMFGYDVGVSGGVTSMPDFLKKFF 60
MPAGGFS V+KNGGTEFEAKITPIVVISCVMAATGGLMFGYDVGVSGGVTSMPDFLKKFF
Sbjct: 1 MPAGGFSTVTKNGGTEFEAKITPIVVISCVMAATGGLMFGYDVGVSGGVTSMPDFLKKFF 60
Query: 61 PVVYRKTQLKEEIDSNYCKYDNQGLQLFTSSLYLAGLTATFFASYTTRKLGRRLTMLIAG 120
PVVYRKTQLKEEIDSNYCKYDNQGLQLFTSSLYLAGLTATFFASYTTRKLGRRLTMLIAG
Sbjct: 61 PVVYRKTQLKEEIDSNYCKYDNQGLQLFTSSLYLAGLTATFFASYTTRKLGRRLTMLIAG 120
Query: 121 VFFIIGTVLNATAENLAMLIVGRISLGCGVGFANQ 156
VFFIIGT LNATAENL MLIVGRISLGCGVGFANQ
Sbjct: 121 VFFIIGTGLNATAENLTMLIVGRISLGCGVGFANQ 155
BLAST of Lag0021279 vs. NCBI nr
Match:
XP_004134452.1 (sugar transport protein 13 [Cucumis sativus] >KGN57000.1 hypothetical protein Csa_011157 [Cucumis sativus])
HSP 1 Score: 296.2 bits (757), Expect = 1.8e-76
Identity = 150/155 (96.77%), Postives = 151/155 (97.42%), Query Frame = 0
Query: 1 MPAGGFSAVSKNGGTEFEAKITPIVVISCVMAATGGLMFGYDVGVSGGVTSMPDFLKKFF 60
MPAGGFSAV KNGGTEFEAKITPIVVISCVMAATGGLMFGYDVGVSGGVTSMPDFLKKFF
Sbjct: 1 MPAGGFSAVHKNGGTEFEAKITPIVVISCVMAATGGLMFGYDVGVSGGVTSMPDFLKKFF 60
Query: 61 PVVYRKTQLKEEIDSNYCKYDNQGLQLFTSSLYLAGLTATFFASYTTRKLGRRLTMLIAG 120
PVVYRKTQLKEE DSNYCKYDNQGLQLFTSSLYLAGLTATFFASYTTRKLGR+LTMLIAG
Sbjct: 61 PVVYRKTQLKEESDSNYCKYDNQGLQLFTSSLYLAGLTATFFASYTTRKLGRKLTMLIAG 120
Query: 121 VFFIIGTVLNATAENLAMLIVGRISLGCGVGFANQ 156
VFFIIGTVLN TAENL MLIVGRISLGCGVGFANQ
Sbjct: 121 VFFIIGTVLNTTAENLMMLIVGRISLGCGVGFANQ 155
BLAST of Lag0021279 vs. NCBI nr
Match:
XP_023526043.1 (sugar transport protein 13-like [Cucurbita pepo subsp. pepo])
HSP 1 Score: 294.7 bits (753), Expect = 5.1e-76
Identity = 148/155 (95.48%), Postives = 152/155 (98.06%), Query Frame = 0
Query: 1 MPAGGFSAVSKNGGTEFEAKITPIVVISCVMAATGGLMFGYDVGVSGGVTSMPDFLKKFF 60
MPAGGFSAVSKN GT FEAKITPIVVISCVMAATGGLMFGYDVG+SGGVTSMPDFLKKFF
Sbjct: 1 MPAGGFSAVSKNDGTVFEAKITPIVVISCVMAATGGLMFGYDVGISGGVTSMPDFLKKFF 60
Query: 61 PVVYRKTQLKEEIDSNYCKYDNQGLQLFTSSLYLAGLTATFFASYTTRKLGRRLTMLIAG 120
PVVYRKTQ+KEEIDSNYCKYDNQGLQLFTSSLYLAGLTATFFASYTTR+LGRRLTMLIAG
Sbjct: 61 PVVYRKTQMKEEIDSNYCKYDNQGLQLFTSSLYLAGLTATFFASYTTRRLGRRLTMLIAG 120
Query: 121 VFFIIGTVLNATAENLAMLIVGRISLGCGVGFANQ 156
VFFIIGTVLNATAENL MLI+GRISLGCGVGFANQ
Sbjct: 121 VFFIIGTVLNATAENLTMLILGRISLGCGVGFANQ 155
BLAST of Lag0021279 vs. NCBI nr
Match:
XP_022955928.1 (sugar transport protein 13-like [Cucurbita moschata] >KAG6582289.1 Sugar transport protein 13, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 294.7 bits (753), Expect = 5.1e-76
Identity = 148/155 (95.48%), Postives = 152/155 (98.06%), Query Frame = 0
Query: 1 MPAGGFSAVSKNGGTEFEAKITPIVVISCVMAATGGLMFGYDVGVSGGVTSMPDFLKKFF 60
MPAGGFSAVSKN GT FEAKITPIVVISCVMAATGGLMFGYDVG+SGGVTSMPDFLKKFF
Sbjct: 1 MPAGGFSAVSKNDGTVFEAKITPIVVISCVMAATGGLMFGYDVGISGGVTSMPDFLKKFF 60
Query: 61 PVVYRKTQLKEEIDSNYCKYDNQGLQLFTSSLYLAGLTATFFASYTTRKLGRRLTMLIAG 120
PVVYRKTQ+KEEIDSNYCKYDNQGLQLFTSSLYLAGLTATFFASYTTR+LGRRLTMLIAG
Sbjct: 61 PVVYRKTQMKEEIDSNYCKYDNQGLQLFTSSLYLAGLTATFFASYTTRRLGRRLTMLIAG 120
Query: 121 VFFIIGTVLNATAENLAMLIVGRISLGCGVGFANQ 156
VFFIIGTVLNATAENL MLI+GRISLGCGVGFANQ
Sbjct: 121 VFFIIGTVLNATAENLTMLILGRISLGCGVGFANQ 155
BLAST of Lag0021279 vs. NCBI nr
Match:
XP_008438691.1 (PREDICTED: sugar transport protein 13-like [Cucumis melo])
HSP 1 Score: 293.9 bits (751), Expect = 8.7e-76
Identity = 148/155 (95.48%), Postives = 151/155 (97.42%), Query Frame = 0
Query: 1 MPAGGFSAVSKNGGTEFEAKITPIVVISCVMAATGGLMFGYDVGVSGGVTSMPDFLKKFF 60
MPAGGFSAV KNGGTEFEAKITPIVVISCVMAATGGLMFGYDVGVSGGVTSMPDFLKKFF
Sbjct: 1 MPAGGFSAVRKNGGTEFEAKITPIVVISCVMAATGGLMFGYDVGVSGGVTSMPDFLKKFF 60
Query: 61 PVVYRKTQLKEEIDSNYCKYDNQGLQLFTSSLYLAGLTATFFASYTTRKLGRRLTMLIAG 120
PVVYRKTQLKEEI+SNYCKYDNQG+QLFTSSLYLAGLTATFFASYTTRKLGR+LTMLIAG
Sbjct: 61 PVVYRKTQLKEEINSNYCKYDNQGIQLFTSSLYLAGLTATFFASYTTRKLGRKLTMLIAG 120
Query: 121 VFFIIGTVLNATAENLAMLIVGRISLGCGVGFANQ 156
VFF IGTVLN TAENL MLIVGRISLGCGVGFANQ
Sbjct: 121 VFFTIGTVLNTTAENLMMLIVGRISLGCGVGFANQ 155
BLAST of Lag0021279 vs. ExPASy Swiss-Prot
Match:
Q94AZ2 (Sugar transport protein 13 OS=Arabidopsis thaliana OX=3702 GN=STP13 PE=1 SV=2)
HSP 1 Score: 248.4 bits (633), Expect = 5.5e-65
Identity = 130/155 (83.87%), Postives = 136/155 (87.74%), Query Frame = 0
Query: 1 MPAGGFSAVSKNGGTEFEAKITPIVVISCVMAATGGLMFGYDVGVSGGVTSMPDFLKKFF 60
M GGF A S N G EFEAKITPIV+ISC+MAATGGLMFGYDVGVSGGVTSMPDFL+KFF
Sbjct: 1 MTGGGF-ATSAN-GVEFEAKITPIVIISCIMAATGGLMFGYDVGVSGGVTSMPDFLEKFF 60
Query: 61 PVVYRKTQLKEEIDSNYCKYDNQGLQLFTSSLYLAGLTATFFASYTTRKLGRRLTMLIAG 120
PVVYRK + DSNYCKYDNQGLQLFTSSLYLAGLTATFFASYTTR LGRRLTMLIAG
Sbjct: 61 PVVYRKVVAGADKDSNYCKYDNQGLQLFTSSLYLAGLTATFFASYTTRTLGRRLTMLIAG 120
Query: 121 VFFIIGTVLNATAENLAMLIVGRISLGCGVGFANQ 156
VFFIIG LNA A++LAMLI GRI LGCGVGFANQ
Sbjct: 121 VFFIIGVALNAGAQDLAMLIAGRILLGCGVGFANQ 153
BLAST of Lag0021279 vs. ExPASy Swiss-Prot
Match:
Q10PW9 (Sugar transport protein MST4 OS=Oryza sativa subsp. japonica OX=39947 GN=MST4 PE=1 SV=1)
HSP 1 Score: 238.8 bits (608), Expect = 4.4e-62
Identity = 121/153 (79.08%), Postives = 133/153 (86.93%), Query Frame = 0
Query: 3 AGGFSAVSKNGGTEFEAKITPIVVISCVMAATGGLMFGYDVGVSGGVTSMPDFLKKFFPV 62
AGGFS G EFEAKITPIV+ISC+MAATGGLMFGYDVG+SGGVTSM DFL++FFP
Sbjct: 2 AGGFSV--SGSGVEFEAKITPIVIISCIMAATGGLMFGYDVGISGGVTSMDDFLREFFPT 61
Query: 63 VYRKTQLKEEIDSNYCKYDNQGLQLFTSSLYLAGLTATFFASYTTRKLGRRLTMLIAGVF 122
V +K E+ +SNYCKYDNQGLQLFTSSLYLAGLTATFFASYTTR+LGRRLTMLIAGVF
Sbjct: 62 VLKKKH--EDKESNYCKYDNQGLQLFTSSLYLAGLTATFFASYTTRRLGRRLTMLIAGVF 121
Query: 123 FIIGTVLNATAENLAMLIVGRISLGCGVGFANQ 156
FI+G + N A+NLAMLIVGRI LGCGVGFANQ
Sbjct: 122 FIVGVIFNGAAQNLAMLIVGRILLGCGVGFANQ 150
BLAST of Lag0021279 vs. ExPASy Swiss-Prot
Match:
Q7EZD7 (Sugar transport protein MST3 OS=Oryza sativa subsp. japonica OX=39947 GN=MST3 PE=2 SV=1)
HSP 1 Score: 180.6 bits (457), Expect = 1.4e-44
Identity = 93/154 (60.39%), Postives = 117/154 (75.97%), Query Frame = 0
Query: 3 AGGFSAVSKNGGTEFEAKITPIVVISCVMAATGGLMFGYDVGVSGGVTSMPDFLKKFFPV 62
AGG + VS G ++ K+T V +CV+AATGGL+FGYD+G+SGGVTSM FL+KFFP
Sbjct: 2 AGG-AVVSTGAGKDYPGKLTLFVFFTCVVAATGGLIFGYDIGISGGVTSMDPFLRKFFPE 61
Query: 63 VYRKTQLKEEIDSNYCKYDNQGLQLFTSSLYLAGLTATFFASYTTRKLGRRLTMLIAGVF 122
VYRK Q+ ++ ++ YCKYDNQ LQ FTSSLYLA L ++FFA+ TR LGR+ +M G+
Sbjct: 62 VYRKKQMADK-NNQYCKYDNQLLQTFTSSLYLAALVSSFFAATVTRVLGRKWSMFAGGLT 121
Query: 123 FIIGTVLNATAENLAMLIVGRISLGCGVGFANQT 157
F+IG LN AEN+AMLIVGRI LG GVGFANQ+
Sbjct: 122 FLIGAALNGAAENVAMLIVGRILLGVGVGFANQS 153
BLAST of Lag0021279 vs. ExPASy Swiss-Prot
Match:
P23586 (Sugar transport protein 1 OS=Arabidopsis thaliana OX=3702 GN=STP1 PE=1 SV=2)
HSP 1 Score: 172.6 bits (436), Expect = 3.8e-42
Identity = 88/155 (56.77%), Postives = 114/155 (73.55%), Query Frame = 0
Query: 1 MPAGGFSAVSKNGGTEFEAKITPIVVISCVMAATGGLMFGYDVGVSGGVTSMPDFLKKFF 60
MPAGGF V +G + K+TP V+ +CV+AA GGL+FGYD+G+SGGVTSMP FLK+FF
Sbjct: 1 MPAGGF--VVGDGQKAYPGKLTPFVLFTCVVAAMGGLIFGYDIGISGGVTSMPSFLKRFF 60
Query: 61 PVVYRKTQLKEEIDSNYCKYDNQGLQLFTSSLYLAGLTATFFASYTTRKLGRRLTMLIAG 120
P VYRK Q ++ + YC+YD+ L +FTSSLYLA L ++ AS TRK GRRL+ML G
Sbjct: 61 PSVYRKQQ-EDASTNQYCQYDSPTLTMFTSSLYLAALISSLVASTVTRKFGRRLSMLFGG 120
Query: 121 VFFIIGTVLNATAENLAMLIVGRISLGCGVGFANQ 156
+ F G ++N A+++ MLIVGRI LG G+GFANQ
Sbjct: 121 ILFCAGALINGFAKHVWMLIVGRILLGFGIGFANQ 152
BLAST of Lag0021279 vs. ExPASy Swiss-Prot
Match:
Q9SBA7 (Sugar transport protein 8 OS=Arabidopsis thaliana OX=3702 GN=STP8 PE=2 SV=2)
HSP 1 Score: 172.2 bits (435), Expect = 5.0e-42
Identity = 91/148 (61.49%), Postives = 112/148 (75.68%), Query Frame = 0
Query: 9 VSKNGGTE-FEAKITPIVVISCVMAATGGLMFGYDVGVSGGVTSMPDFLKKFFPVVYRKT 68
+S NG ++ F+AK+T V I ++AA GGL+FGYD+G+SGGVT+M DFLK+FFP VY +
Sbjct: 5 ISSNGNSKSFDAKMTVYVFICVIIAAVGGLIFGYDIGISGGVTAMDDFLKEFFPSVYERK 64
Query: 69 QLKEEIDSNYCKYDNQGLQLFTSSLYLAGLTATFFASYTTRKLGRRLTMLIAGVFFIIGT 128
K ++NYCKYDNQ LQLFTSSLYLA L A+FFAS T KLGRR TM +A +FF+IG
Sbjct: 65 --KHAHENNYCKYDNQFLQLFTSSLYLAALVASFFASATCSKLGRRPTMQLASIFFLIGV 124
Query: 129 VLNATAENLAMLIVGRISLGCGVGFANQ 156
L A A N+ MLI+GRI LG GVGF NQ
Sbjct: 125 GLAAGAVNIYMLIIGRILLGFGVGFGNQ 150
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_038883579.1 | 4.6e-77 | 97.42 | sugar transport protein 13-like [Benincasa hispida] | [more] |
XP_004134452.1 | 1.8e-76 | 96.77 | sugar transport protein 13 [Cucumis sativus] >KGN57000.1 hypothetical protein Cs... | [more] |
XP_023526043.1 | 5.1e-76 | 95.48 | sugar transport protein 13-like [Cucurbita pepo subsp. pepo] | [more] |
XP_022955928.1 | 5.1e-76 | 95.48 | sugar transport protein 13-like [Cucurbita moschata] >KAG6582289.1 Sugar transpo... | [more] |
XP_008438691.1 | 8.7e-76 | 95.48 | PREDICTED: sugar transport protein 13-like [Cucumis melo] | [more] |
Match Name | E-value | Identity | Description | |
Q94AZ2 | 5.5e-65 | 83.87 | Sugar transport protein 13 OS=Arabidopsis thaliana OX=3702 GN=STP13 PE=1 SV=2 | [more] |
Q10PW9 | 4.4e-62 | 79.08 | Sugar transport protein MST4 OS=Oryza sativa subsp. japonica OX=39947 GN=MST4 PE... | [more] |
Q7EZD7 | 1.4e-44 | 60.39 | Sugar transport protein MST3 OS=Oryza sativa subsp. japonica OX=39947 GN=MST3 PE... | [more] |
P23586 | 3.8e-42 | 56.77 | Sugar transport protein 1 OS=Arabidopsis thaliana OX=3702 GN=STP1 PE=1 SV=2 | [more] |
Q9SBA7 | 5.0e-42 | 61.49 | Sugar transport protein 8 OS=Arabidopsis thaliana OX=3702 GN=STP8 PE=2 SV=2 | [more] |