Lag0019983 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGATTTCTGGTCGTTGCGCAGCTTGTAAGTATTTGAGAAGAAGATGCCCTTCCGATTGCATTTTTTCCCCTTTCTTTCCTTCCAATAACCCTCTAAGATTTTCCATTGTTCATCGAATCTATGGTGCCAGCAATGTCGCTAAATTCCTCCATGTAAGTCCATATAATCTTTTTTCCTATGCTTTATTAATAAACCAACTCTTCAAATAATGAATTTTAAATTTATTAACTCTCTTTCTGTTTTTTTTTTTTTTTTTTTTTGGTTAATTTAATCAGCAACTTCCTGTGCATCTACGAGCTGAAGCAGCAGAAACGTTGTTTTTTGAGGCGAAATGCAGAATTGAAGATCCAGTTTATGGATGTGTTGGGATTATTTCTCAATTGCAACATCAATTACACGTGGCAGAAACCCAGTTGGCCAAAACTCGAGCTGAGATTGCTTTTGTGGCTTCCAATGTCCTAGAAGCTCAAGCCCAAGATTTCGCAATTGAGCCCATGCAAGGCCCAAATAGTATTGGGCTCTCTCATTTTGGGCTTTCCACTCCAGCTTATTGGTTTAATTCCAGCTTTTCTAATTTCTAA ATGATTTCTGGTCGTTGCGCAGCTTGTAAGTATTTGAGAAGAAGATGCCCTTCCGATTGCATTTTTTCCCCTTTCTTTCCTTCCAATAACCCTCTAAGATTTTCCATTGTTCATCGAATCTATGGTGCCAGCAATGTCGCTAAATTCCTCCATCAACTTCCTGTGCATCTACGAGCTGAAGCAGCAGAAACGTTGTTTTTTGAGGCGAAATGCAGAATTGAAGATCCAGTTTATGGATGTGTTGGGATTATTTCTCAATTGCAACATCAATTACACGTGGCAGAAACCCAGTTGGCCAAAACTCGAGCTGAGATTGCTTTTGTGGCTTCCAATGTCCTAGAAGCTCAAGCCCAAGATTTCGCAATTGAGCCCATGCAAGGCCCAAATAGTATTGGGCTCTCTCATTTTGGGCTTTCCACTCCAGCTTATTGGTTTAATTCCAGCTTTTCTAATTTCTAA ATGATTTCTGGTCGTTGCGCAGCTTGTAAGTATTTGAGAAGAAGATGCCCTTCCGATTGCATTTTTTCCCCTTTCTTTCCTTCCAATAACCCTCTAAGATTTTCCATTGTTCATCGAATCTATGGTGCCAGCAATGTCGCTAAATTCCTCCATCAACTTCCTGTGCATCTACGAGCTGAAGCAGCAGAAACGTTGTTTTTTGAGGCGAAATGCAGAATTGAAGATCCAGTTTATGGATGTGTTGGGATTATTTCTCAATTGCAACATCAATTACACGTGGCAGAAACCCAGTTGGCCAAAACTCGAGCTGAGATTGCTTTTGTGGCTTCCAATGTCCTAGAAGCTCAAGCCCAAGATTTCGCAATTGAGCCCATGCAAGGCCCAAATAGTATTGGGCTCTCTCATTTTGGGCTTTCCACTCCAGCTTATTGGTTTAATTCCAGCTTTTCTAATTTCTAA MISGRCAACKYLRRRCPSDCIFSPFFPSNNPLRFSIVHRIYGASNVAKFLHQLPVHLRAEAAETLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEIAFVASNVLEAQAQDFAIEPMQGPNSIGLSHFGLSTPAYWFNSSFSNF Homology
BLAST of Lag0019983 vs. NCBI nr
Match: XP_023522202.1 (LOB domain-containing protein 24-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 277.7 bits (709), Expect = 5.9e-71 Identity = 131/147 (89.12%), Postives = 140/147 (95.24%), Query Frame = 0
BLAST of Lag0019983 vs. NCBI nr
Match: XP_022985104.1 (LOB domain-containing protein 24-like [Cucurbita maxima]) HSP 1 Score: 277.3 bits (708), Expect = 7.7e-71 Identity = 134/148 (90.54%), Postives = 141/148 (95.27%), Query Frame = 0
BLAST of Lag0019983 vs. NCBI nr
Match: KAG7014789.1 (LOB domain-containing protein 24, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 275.4 bits (703), Expect = 2.9e-70 Identity = 130/147 (88.44%), Postives = 139/147 (94.56%), Query Frame = 0
BLAST of Lag0019983 vs. NCBI nr
Match: XP_022923144.1 (LOB domain-containing protein 24-like [Cucurbita moschata]) HSP 1 Score: 269.6 bits (688), Expect = 1.6e-68 Identity = 128/147 (87.07%), Postives = 137/147 (93.20%), Query Frame = 0
BLAST of Lag0019983 vs. NCBI nr
Match: XP_004140854.1 (LOB domain-containing protein 24 [Cucumis sativus] >KGN57342.1 hypothetical protein Csa_009713 [Cucumis sativus]) HSP 1 Score: 266.5 bits (680), Expect = 1.4e-67 Identity = 131/150 (87.33%), Postives = 137/150 (91.33%), Query Frame = 0
BLAST of Lag0019983 vs. ExPASy Swiss-Prot
Match: P59468 (LOB domain-containing protein 24 OS=Arabidopsis thaliana OX=3702 GN=LBD24 PE=2 SV=1) HSP 1 Score: 158.7 bits (400), Expect = 5.3e-38 Identity = 72/116 (62.07%), Postives = 89/116 (76.72%), Query Frame = 0
BLAST of Lag0019983 vs. ExPASy Swiss-Prot
Match: P59467 (LOB domain-containing protein 23 OS=Arabidopsis thaliana OX=3702 GN=LBD23 PE=1 SV=1) HSP 1 Score: 157.1 bits (396), Expect = 1.5e-37 Identity = 71/116 (61.21%), Postives = 88/116 (75.86%), Query Frame = 0
BLAST of Lag0019983 vs. ExPASy Swiss-Prot
Match: Q8LBW3 (LOB domain-containing protein 12 OS=Arabidopsis thaliana OX=3702 GN=LBD12 PE=1 SV=2) HSP 1 Score: 133.7 bits (335), Expect = 1.8e-30 Identity = 71/164 (43.29%), Postives = 102/164 (62.20%), Query Frame = 0
BLAST of Lag0019983 vs. ExPASy Swiss-Prot
Match: Q9SHE9 (LOB domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=LBD4 PE=1 SV=1) HSP 1 Score: 131.7 bits (330), Expect = 6.9e-30 Identity = 56/100 (56.00%), Postives = 75/100 (75.00%), Query Frame = 0
BLAST of Lag0019983 vs. ExPASy Swiss-Prot
Match: Q8L8Q3 (LOB domain-containing protein 25 OS=Arabidopsis thaliana OX=3702 GN=LBD25 PE=2 SV=3) HSP 1 Score: 123.6 bits (309), Expect = 1.9e-27 Identity = 53/100 (53.00%), Postives = 76/100 (76.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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