Lag0019915 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0019915
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionProtein jagunal
Locationchr5: 46683852 .. 46687171 (+)
RNA-Seq ExpressionLag0019915
SyntenyLag0019915
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATCAGAGGAAATCGGCTGCCGGAAGGCCGTCTGGAACCGATGGCTCTGATTTCTCCTATCGCATGGTCGTCGATTCTCGTAAGTTCTCTCACTTTCTTCTCCTAATTTTCATTTGGCTGTTGAGCAATCGTGTAATGTATAGAACAAAAAGTCGATCGATATGCAGAAGAAAAACTTCGGTTTTCGTCTTTGTTTGGTCCTCAATGATATCCTGTATTTGGCTTAGTGGAAGAGAACTGTCTAGCTCTAGCTTTTTAGGCATTGGATCATGAAATGGGATTCGTTTAGCTATTTTAATTGTCTTATTGGAGTCAATTTCGGTTCTTATGACGGGTTATTCTAATTCTAGGGTATCAAAAGGTTGCCAAAGGGAAATCTCGTCTCTATACCCTGATTTTAGCTCAGGTACACGCATTATATTGCTTTTACAGATTTTTTTTTTGTATATTCATATCTTCTAGTGTGTTTTGCTTCATTGTTGTCATGAATGCAAAAATGCAATATTTTCTTATGGGACTCTCGATGCTTTTTCTTTTACTATTTAAAATATTGATTTTTCTTGCGTTTGTAATCACGACAGCTTCAAACTTAGCTATAATTGATGACCGACAGTAGAATAGATGATGTTTAACAATGTCCATAATTGTTTCCTATTTTTTTTAAGATATTGTTCATATTGTAATTTACTGGCGCAATGAATGTGTATTAATTTAGTAAAAGTTTACAGTCAATTCTGCATACACCCAAAGTCCAAACTAGAAACCAAATCTGGACATGCAATGAGCCCTCAACGAGTACATATAGGTTTATCATTCTGTTTCAAGAAATTGGAGTCAAACTATAATTTAGCACCAAATTGCCAAGCTGGAAATGCTGTAGTCTCTATCCCATTTCCAGTCAAATCATCTTCTCTTCTTGTGTCACAAGTTTAAAGGCATTGTTTTTAAACAGACAGTACTAATCTAGTAAATTAAGAAGTATCATGTCCAATTTTATATCAGAACAAAGGGCATATGTTGACTAAGTTGCAGACACAGACAAGACATTTTCTTAGCACATATTGAACTAATCAAATGGATCTGTTGGCTATATAAATGTTTGAGTTATAGGAAAAGGAATATGGAGGCAAACATTAACCACTAGGTGATTTACCATCAAGTTGTAGACAAGGATTACTTTATAAAGAAAATGATAATAGAAACAAGCACAGGCTAGCAATAAAGAAGAGGACCAAAGTGGCAGAGAGTTGGATTGAGTTATTTACTTGAGCACAAGAAGTCCAGGTTCGAAAGAGCTCTCCCGTTAACATCATTGGTACTACTAAGAAAAGCAGGCCAACTATAGTTGAGCAAAATAACATCTCGGTCTGCCAAAGAGAATATCAAAAGGTTATATCAAGAATTAAAGAACAAAACTCAATATTGTTTCAGAATATAAACATCTAGCACTCTTCTTGAATGAATTGAATACTATGAGATGATGATTAGAAGTATATTTTTCACTGTTGCATTTAAGAAACAGCAGACAGGTAAAACTGAAGGGGGATCAAAGCTTACCTGTGTAGTATCAGGATTCATTGTAAAAATGGCTTCCTGTAAATTTCCAAGATAGGTGTCCATGACAAGAGCACTACTTATCATAACAACACGTTATACACTGAAATTTGGAGAAGGCTGTGCATCTGCTAGGGTGAAGAGGATGAATCCAGTACCTAAAAAAGGGTAGAGATGTACTCATGAATTGGGTATTTCCTTCTGAAGACTGGAATGAAGGCTCCCATTATCATAACAGGAAGCACCTGAAAATTACATAACAAAAGGGTCAATCTAAAATCACAGAATCATGTTAGTGAGAGTTAGATTTGAGGAGAAGACTCCTTTACATCTATGACTTCCTTTAGGACATCCAGATCGATAATTTCCTGATTCCTCCCAAAATGTCTTCAATTTCTTTTGATATGAGCTTAATTTAGTGTTGTACCAGATGATTGATACCTCAATATTATGAAGGCCTGTAATTTGTGATCAATGAAGTTTTCATGTAAGTCTTGGTTAAATTTTTTCTTCTAGTTTTCTTGTCTCTAATTTGACTAACTAGAATGCCTGTCTTATCAGTCTTCCTCTATTGAAATCCATGAATATTTATCTCTACTTGTAAACATCTGGCTAAACCAAACTAGAAGAGTTTGGTAGTGACATAAAACAATTACATGATCTAATGATCTTATAATGTGTGCATACCTTAGTAATGTTGGTTTTTACATGTTTAATTAAAAGGGTGCTGGTGCTTACCTCTGGACCTCTCGTGACTGAATATTGTCATACCCTAATTGAGTTTGTTTGATTACTCCATAGGTTCTCATTCAGTTATGTGGATTGGTTTACTTGTTTTTATTGACGTCAAGGAGAGAGACTCCTGATAAACTAGCTATTTCATCTGCTATCACTGGTTTCTTTTCGTTGTTCCTAGGAGAACTAGGTTGGTAGTTATACTATTCCCTTCTGTACCTAACTTCTTACATCTTTATTTGTTTCAACAGTAACGATTGATTTTTTCCTAATGTTTTATTGAAGGTCGAAGGAAAAGTCGTGCCAGTTTTTTGAAACTTTATATGATTGCATCATCTCTAGCTCTCCTACTACTTTTTGTTGATGTCTCTCAGGGAAATTATACATTCGAGGTAAGAAAAACTGATTCACTGTCTCATTTTCTGCTCTAATAAGAGAGAAATCAAATCAAAATGTTATGCGAGCTCATCAGGCAACAGTCGTAATTGAATTATTATATATGCTGAGTCACTGACTAGTCGAAGAAGTAATAGCAATGAAAACGAGAAATTAAATTGGTGGATAAAAATTAAAATAGGCTCCTTATATTGGGAAGAATCCACCTTTGTATTTCCCGTTAATAACTCCAAAGATTCATTGTTATCTCTGTCACCATTGGCATCCATTCTTGAAAATGGTGGGAAGCTTCAATTTGATTGGTTGATTGTATTTATAACTCTATGACCTTTACCTTCTATGTGGTAATGTCTGTTCATTCTAACTGAGTTTTGAACTTTATGAACCACTTAGGGTATTGGGGATCTAAGTAATTGGCAGACAAAGAAGCTCGAACTTTTCGAGACGGCCCGCATTTTTCTTGGTGTGTTCTTAATACATGGTATCTTTATTATTTTTCATATAGTCAGTAAGTATCAACTAACACTGGAATTCTGATATGTCTTCATACAGGAGCCCTGCTTCAGATATTTGCAATCAGCACAGTGATTTCCCTTGTTGGTAACATGTCTCCTCCAAAACGTGCCTCTTAA

mRNA sequence

ATGAATCAGAGGAAATCGGCTGCCGGAAGGCCGTCTGGAACCGATGGCTCTGATTTCTCCTATCGCATGGTCGTCGATTCTCGGTATCAAAAGGTTGCCAAAGGGAAATCTCGTCTCTATACCCTGATTTTAGCTCAGGTTCTCATTCAGTTATGTGGATTGGTTTACTTGTTTTTATTGACGTCAAGGAGAGAGACTCCTGATAAACTAGCTATTTCATCTGCTATCACTGGTTTCTTTTCGTTGTTCCTAGGAGAACTAGGTCGAAGGAAAAGTCGTGCCAGTTTTTTGAAACTTTATATGATTGCATCATCTCTAGCTCTCCTACTACTTTTTGTTGATGTCTCTCAGGGAAATTATACATTCGAGGGTATTGGGGATCTAAGTAATTGGCAGACAAAGAAGCTCGAACTTTTCGAGACGGCCCGCATTTTTCTTGGAGCCCTGCTTCAGATATTTGCAATCAGCACAGTGATTTCCCTTGTTGGTAACATGTCTCCTCCAAAACGTGCCTCTTAA

Coding sequence (CDS)

ATGAATCAGAGGAAATCGGCTGCCGGAAGGCCGTCTGGAACCGATGGCTCTGATTTCTCCTATCGCATGGTCGTCGATTCTCGGTATCAAAAGGTTGCCAAAGGGAAATCTCGTCTCTATACCCTGATTTTAGCTCAGGTTCTCATTCAGTTATGTGGATTGGTTTACTTGTTTTTATTGACGTCAAGGAGAGAGACTCCTGATAAACTAGCTATTTCATCTGCTATCACTGGTTTCTTTTCGTTGTTCCTAGGAGAACTAGGTCGAAGGAAAAGTCGTGCCAGTTTTTTGAAACTTTATATGATTGCATCATCTCTAGCTCTCCTACTACTTTTTGTTGATGTCTCTCAGGGAAATTATACATTCGAGGGTATTGGGGATCTAAGTAATTGGCAGACAAAGAAGCTCGAACTTTTCGAGACGGCCCGCATTTTTCTTGGAGCCCTGCTTCAGATATTTGCAATCAGCACAGTGATTTCCCTTGTTGGTAACATGTCTCCTCCAAAACGTGCCTCTTAA

Protein sequence

MNQRKSAAGRPSGTDGSDFSYRMVVDSRYQKVAKGKSRLYTLILAQVLIQLCGLVYLFLLTSRRETPDKLAISSAITGFFSLFLGELGRRKSRASFLKLYMIASSLALLLLFVDVSQGNYTFEGIGDLSNWQTKKLELFETARIFLGALLQIFAISTVISLVGNMSPPKRAS
Homology
[Close]
BLAST of Lag0019915 vs. NCBI nr
Match: XP_022989151.1 (uncharacterized protein LOC111486305 [Cucurbita maxima])

HSP 1 Score: 300.8 bits (769), Expect = 7.4e-78
Identity = 156/172 (90.70%), Postives = 165/172 (95.93%), Query Frame = 0 

Query: 1   MNQRKSAAGRPSGTDGSDFSYRMVVDSRYQKVAKGKSRLYTLILAQVLIQLCGLVYLFLL 60
           MNQRKSAAGRPSGTDGSDF+YRMVVDSRYQKVAKGKSRLYTLIL QV+IQLCG+VYLF+L
Sbjct: 1   MNQRKSAAGRPSGTDGSDFAYRMVVDSRYQKVAKGKSRLYTLILNQVVIQLCGIVYLFIL 60

Query: 61  TSRRETPDKLAISSAITGFFSLFLGELGRRKSRASFLKLYMIASSLALLLLFVDVSQGNY 120
           TS+RETPDKLAISSA+TGF SLFLGELGRR+SRASFLK YMIASSLALLLLFV+VSQGNY
Sbjct: 61  TSKRETPDKLAISSAVTGFLSLFLGELGRRRSRASFLKAYMIASSLALLLLFVNVSQGNY 120

Query: 121 TFEGIGDLSNWQTKKLELFETARIFLGALLQIFAISTVISLVGNMSPPKRAS 173
           TFEGI DLSNWQTKKLEL ET RIFLGALLQIFAI TVISLVGNMSPPKR+S
Sbjct: 121 TFEGIEDLSNWQTKKLELLETIRIFLGALLQIFAIRTVISLVGNMSPPKRSS 172

[Close]
BLAST of Lag0019915 vs. NCBI nr
Match: XP_022943094.1 (uncharacterized protein LOC111447929 [Cucurbita moschata])

HSP 1 Score: 299.3 bits (765), Expect = 2.2e-77
Identity = 154/172 (89.53%), Postives = 165/172 (95.93%), Query Frame = 0 

Query: 1   MNQRKSAAGRPSGTDGSDFSYRMVVDSRYQKVAKGKSRLYTLILAQVLIQLCGLVYLFLL 60
           MNQRKSAAGRPSGTDGSDF+YRMVVDSRYQKVAKGKSRLYTLIL QV+IQLCG+VYLF+L
Sbjct: 1   MNQRKSAAGRPSGTDGSDFAYRMVVDSRYQKVAKGKSRLYTLILNQVIIQLCGVVYLFIL 60

Query: 61  TSRRETPDKLAISSAITGFFSLFLGELGRRKSRASFLKLYMIASSLALLLLFVDVSQGNY 120
           TS+RETPDKLAISSA+ GFFSLF+GELGRR+SRASF+K YMIASSLALLLLFV+VSQGNY
Sbjct: 61  TSKRETPDKLAISSAVIGFFSLFIGELGRRRSRASFMKAYMIASSLALLLLFVNVSQGNY 120

Query: 121 TFEGIGDLSNWQTKKLELFETARIFLGALLQIFAISTVISLVGNMSPPKRAS 173
           TFEGI DLSNWQTKKLEL ET RIFLGALLQIFAI TVISLVGNMSPPKR+S
Sbjct: 121 TFEGIEDLSNWQTKKLELLETIRIFLGALLQIFAIRTVISLVGNMSPPKRSS 172

[Close]
BLAST of Lag0019915 vs. NCBI nr
Match: XP_023551542.1 (uncharacterized protein LOC111809297 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 296.2 bits (757), Expect = 1.8e-76
Identity = 154/172 (89.53%), Postives = 164/172 (95.35%), Query Frame = 0 

Query: 1   MNQRKSAAGRPSGTDGSDFSYRMVVDSRYQKVAKGKSRLYTLILAQVLIQLCGLVYLFLL 60
           MNQRKSAAGRPSGTDGSDF+YRMVVDSRYQKVAKGKSRL TLIL QV+IQLCG+VYLF+L
Sbjct: 1   MNQRKSAAGRPSGTDGSDFAYRMVVDSRYQKVAKGKSRLSTLILNQVVIQLCGVVYLFIL 60

Query: 61  TSRRETPDKLAISSAITGFFSLFLGELGRRKSRASFLKLYMIASSLALLLLFVDVSQGNY 120
           TS+RETPDKLAISSA+ GFFSLF+GELGRR+SRASFLK YMIASSLALLLLFV+VSQGNY
Sbjct: 61  TSKRETPDKLAISSAVIGFFSLFIGELGRRRSRASFLKAYMIASSLALLLLFVNVSQGNY 120

Query: 121 TFEGIGDLSNWQTKKLELFETARIFLGALLQIFAISTVISLVGNMSPPKRAS 173
           TFEGI DLSNWQTKKLEL ET RIFLGALLQIFAI TVISLVGNMSPPKR+S
Sbjct: 121 TFEGIEDLSNWQTKKLELLETIRIFLGALLQIFAIRTVISLVGNMSPPKRSS 172

[Close]
BLAST of Lag0019915 vs. NCBI nr
Match: KAG6600169.1 (hypothetical protein SDJN03_05402, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 293.5 bits (750), Expect = 1.2e-75
Identity = 154/172 (89.53%), Postives = 163/172 (94.77%), Query Frame = 0 

Query: 1   MNQRKSAAGRPSGTDGSDFSYRMVVDSRYQKVAKGKSRLYTLILAQVLIQLCGLVYLFLL 60
           MNQRKSAAGRPSGTDGSDF+YRMVVDSRYQKVAKGKSRL TLIL QV+IQLCG+VYLF+L
Sbjct: 58  MNQRKSAAGRPSGTDGSDFAYRMVVDSRYQKVAKGKSRLSTLILNQVVIQLCGMVYLFIL 117

Query: 61  TSRRETPDKLAISSAITGFFSLFLGELGRRKSRASFLKLYMIASSLALLLLFVDVSQGNY 120
           TS+RETPDKLAISSA+TGF SLFLGELGRR+SRASFLK YMIASSLALLLLFV+VSQGNY
Sbjct: 118 TSKRETPDKLAISSAVTGFLSLFLGELGRRRSRASFLKAYMIASSLALLLLFVNVSQGNY 177

Query: 121 TFEGIGDLSNWQTKKLELFETARIFLGALLQIFAISTVISLVGNMSPPKRAS 173
           TFEGI DLSNWQTKKLEL ET RIFLGALLQIFAI TVISLVGNMS PKR+S
Sbjct: 178 TFEGIEDLSNWQTKKLELLETIRIFLGALLQIFAIRTVISLVGNMSLPKRSS 229

[Close]
BLAST of Lag0019915 vs. NCBI nr
Match: KAA0067675.1 (protein jagunal-like protein 1-like isoform X1 [Cucumis melo var. makuwa] >TYK23679.1 protein jagunal-like protein 1-like isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 290.0 bits (741), Expect = 1.3e-74
Identity = 149/172 (86.63%), Postives = 163/172 (94.77%), Query Frame = 0 

Query: 1   MNQRKSAAGRPSGTDGSDFSYRMVVDSRYQKVAKGKSRLYTLILAQVLIQLCGLVYLFLL 60
           M+QRKSAAGRPSGTDGSDFSYRMVVDSRYQKVAKGKSR +TLILAQ++IQLCG+ YLF+L
Sbjct: 35  MSQRKSAAGRPSGTDGSDFSYRMVVDSRYQKVAKGKSRFHTLILAQIVIQLCGVAYLFIL 94

Query: 61  TSRRETPDKLAISSAITGFFSLFLGELGRRKSRASFLKLYMIASSLALLLLFVDVSQGNY 120
           TS++ETPDKLAISSAITGFFSLF+GELG+R SR SFLK+Y+IASSL+LLLL VDVSQGNY
Sbjct: 95  TSKKETPDKLAISSAITGFFSLFIGELGQRHSRTSFLKVYVIASSLSLLLLLVDVSQGNY 154

Query: 121 TFEGIGDLSNWQTKKLELFETARIFLGALLQIFAISTVISLVGNMSPPKRAS 173
           TFE IGDLSNWQTK+LELFE  RI LGALLQIFAISTVISLVGNMSPPKRAS
Sbjct: 155 TFESIGDLSNWQTKQLELFEMIRISLGALLQIFAISTVISLVGNMSPPKRAS 206

The following BLAST results are available for this feature:
BLAST of Lag0019915 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022989151.17.4e-7890.70uncharacterized protein LOC111486305 [Cucurbita maxima][more]
XP_022943094.12.2e-7789.53uncharacterized protein LOC111447929 [Cucurbita moschata][more]
XP_023551542.11.8e-7689.53uncharacterized protein LOC111809297 [Cucurbita pepo subsp. pepo][more]
KAG6600169.11.2e-7589.53hypothetical protein SDJN03_05402, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAA0067675.11.3e-7486.63protein jagunal-like protein 1-like isoform X1 [Cucumis melo var. makuwa] >TYK23... [more]
BLAST of Lag0019915 vs. NCBI nr
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009787Protein jagunalPFAMPF07086Jagunalcoord: 10..103
e-value: 1.1E-8
score: 35.3
IPR009787Protein jagunalPANTHERPTHR20955UNCHARACTERIZEDcoord: 1..172
NoneNo IPR availablePANTHERPTHR20955:SF1PROTEIN JAGUNAL HOMOLOG 1coord: 1..172

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0019915.1Lag0019915.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007029 endoplasmic reticulum organization
biological_process GO:0016192 vesicle-mediated transport
cellular_component GO:0005789 endoplasmic reticulum membrane
cellular_component GO:0016021 integral component of membrane