Lag0017283 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0017283
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	binding partner of ACD11 1-like
Location	chr5: 1722463 .. 1727439 (-)
RNA-Seq Expression	Lag0017283
Synteny	Lag0017283

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTAAGAACACTAGTTTATTTAGAACTAAAAAGAAAAAAAGGAATACTAATTTCATCTCGTTTTGAACTGAGACACTTTAATTTAAGTACCTTGTTATAGGTAATTTTGGACCACTTCGATGTACAAGGAGCCGATGAGAACAACCGGATAGGAATCAGACTGGATGATGGACCTCGAGACGAACGAGCTAGTGGATCAGGCCAAGATCGAATGAACGATCTAGTGGATCAGGCCAAGACCAAAGGGGTCAGGCTTTTGGCTCGACTCTCTCTCTTGCTTTCTAGTCCTCCTACTTCCGTTTTCTGACTTAAGCATCGGAGGCAGTGTGGCTAGCACCACCGGTGTGTAGGTTTTCCGTTTTGCAGGTCACGTCTTTCCCTCATCTACAAATTTACCGTTGTGGCACCGGAAGGTTAGGTGAGTTTCTCTGACCAAATTTGACCATCAACATACCTTATATATTATAAGATAATAATTTTTAAATTTAAATTTTCTTTAACATTTCCAGTCTAGTCTCTCTATTGTCAAATATTGTCTACTTTAGTTTATCCACTTTTGAAGCCTTCGTTTTAATAAATTTGTTTTGTTTTTATCTCTATTCTTCTCACAAAGTTCAACACAAATATTTCACTTAATAAATATATTGAAAGGTTATGTATTGAATTTATTTATTTGCTAATAATATTTGCATTAAATTTTTTCAAATAAATACAATTAGTGTACATGAAAAAAAATTATAAGATTTTAATTTTTTTTTTTTTTTTTTTGTTTTGAAAAGATAAGATTTTAAACTACATGGACTAAAATAGGTATTTTAAAACGGTAAAAACTAGAGTGAACAACATTTAAAATACACCCAACAATAGAATTTAAATCTTAAATACAAAAAAAAAAGAAGAAGAGTGAAGACAATTTGAGTGGACCCATTCTCCTAAAAAAAATAAATAAAATAAGATTTTTTTTTTGAAAAAATATTGAAAAAAGAATTAAATTTGAATGAGTCGGCTTATATTTTATATTTATGTATTTATATGGTCTAAAACTATGATACCGACCCAGTGTTAAATAAATAAATTGCCAACAAGAGCATAGCTCAACTGGTATAAAGATGAATTGGTAACCACGAGATCTGTGGTTCGAATCCCCACCCCCATCAAAAAAAATAATAATAATAATAAATAAATTTATTTTTGGTTAAAAATCACTTTTGGTCCCTAAACTTTCATGAAAGTAACAATTTAGTCCCTGAACTTTGATTTGTAATGATTTAGTCTTAGTACTTTCAATTTTGTAATGATTTAGTCATTGAACTTTCAATTTTGTAACAATTTAGTAATTGATTTTTAATAAATAACAATTTAATTTATGTACTTTCAAATTTACCTAGATAGATTAATAAACTAATTTGGGACCCTATATATTTATAAGCTACACAGTTTAATCATTAAAAAATAAAAATTGACTGTTCCAAAAAAAATAAAAAATAAAAAAAATCGACATTTGATTTTGATGATTTTTTTTTGCAACAAAGATTAAATTGTCACAAGATTGAAAGTATAGGGATTAAATTGTTACAAGATTGGGAGTATAGGGGTTAAATTGTTACAAAATCGAAAGTATAGAGACTAAATTGTTACTAATTAAAATTCAGGGAATAAATTATTACAAAATTGAAATTACAGGGACTAAATCGTTACAAATCAAAATTCAGGGACCAAATTATTACTTTCATGAAAGTTTAGGGACCAAAACTGATTTTCAACCTTTATTTTTCTTTAAGCTATGATGATATATAAACTAAAATGTAACTAAAAAAACAAATTACATTTAAAAACAAAACAATTAAATTCTAATTTGGTAATTTCATAGCTAAGATTGAAGACAGAACCTGTAAGTTGCAACGTGGCTCGTCACAGTTTCCGTGCAGAAGGCCGTCCCGTTATGGAAATTCCCCCCGTCCTGTTAACGTTCCGTTTCAAATCCAAGACGGTTCTTTCACGCGCGTAATAGCGCGTGTAGTACACTTCCCTAGAGTGAAATATCTCGATACTATAAATATCCATCAAAACGGAGCCTTGTTTCTTCGTGCCATAGCGATTTTTCTTTCACCCGAGCGCGACGAAGACTTGGGCCGCACTGAGAGAAAATCCCAAATTCACAATCAAAATCTCCGTTCTAATTCGTGTAGGTTTCAGTTTTCCGGCGATCGTCGGTTGATTCCGTCCCCGTTCCGGCGATTTTATCTTCGTCATTTCCAGCGATGTCGGTTAGTACTTCGTGAATTTCCCTCTCTTTTCGTTGTGTTTGAAGATTTTGGGATTGGGAGGTGGGAAATGGTTGGGGCAAGATTTCATTGGGTTAGATTTGGAGCCGTAGTCTGTGGTTTTTCATTGGAGTCATAACGAAGTGCAATGTGCGGCGAAGGGATTAGATCTCTTGTGGTTTACTTTTACGTTTGACTTTCACATTGGGGGTTTTGTGTTAGGTTGAGATTTTCCCAATCGGTGTGTCAAGAATCGAGATTAATGTTGAAGCTAATGTGTCCATTTCTATGTTTTGATTGATGAAATGTATTATGAGTTTGTGTTATGTTCGTTCTTCCCACTGAATCTGGAGCTGCAAAGAAGCATACATTCGAAATTAAAACCAGGAGCGTCATGCCTGTAATCAGTACTTCGCGCCTTTAGATCATACTTGCTGCTTTGCTTGTTGATTTCCATCCTTTTTTTTTTTGGCTGCACCCATGAGATTTTCCTTTTGGTTGTTCATTTCTATTTTCTGGCCATGGTTGATTTTTTAGCCTCTTTCAGCCCGTGGTTATCACGGTTCAGTTGTACTAATGAATTTATGGACCTTCTTGGAGACAGTGAAGATTTCTTGATCTTTGTCCGAAGTGCTTGTTTTGCATATAATAGCAACTGTTTGATTCTGTATGCAGGTTAAAACTGTTAAAGTCAGCAATGTCTCCTTGGGAGCGTCTGAACGAGATGTCCAGGAGTTTTTTTCCTTTTCTGGTGACATAGAATATCTGGAAATGCAAAGGTTTGTTTACGCTTTTATTTTCAGTTTATGATGTGTGTGTGTGTGTGTGTTTTTTGGGTTCAATTTTTAGGCTAACGCTTAGTTTTTGTTGTTATGCAGTGAAAGTGAACGGTCTCAAACTGCTTATGTAACCTTTAAGGATTCACAAGGAGCAGAGACTGCTGTTCTTCTGTCCGTAAGTTCACTTTGTAGACAATGTCTATAGTTCATAGTAATTATAAAAGTTTTATAACCCATTGGCATTTAAGATATTAACTCTTAAAGATTCGATTATTAGTGGAGCTGTTTGTCAAAGTTGAAATATGAATGGCTATGTTAAAAATGATGGTGTTCTTGGCTGTTATTACTGGCACGTAGCCTTGTCTAGGGAGAGGATGATGCTTTAACCTTGGTCCTTACTACTTGGAAGAAACTAGTGAGGGCCTTTACATTTCTTCTTCTTCTCTTTACTTACATCTTACATCATATCCACCTTCATAAATATGCATCAGTTCCCTCCTATAAATGAATTATTAGAATCCTTGTGCTAGTCTCAATAATTGTATTAGGTGGATCATATTGCCATTTTATGATCACATGATATATGATCTGAGGGAGCAGTTATCCCTTGACGAGTTAAATGGTGTAAGGGACACAGCCTTCGGTGCTAATAGCAGGTGGTCAAATTTTGGCATGAGATTGCTCTTCTATTATTTGAGAGTATAAGTATAAGGGGTAGACCTTAGCTGGAAGTTTGTTCAACGTCAACCAAATTGCCCTTTTTCATTTTCTTTAAGATGTATATCATCATCAATGTTTATTTTCATATATTTAAAACTTGTTATAACATATTAGCTAACGAGAACCAGCAATACTTATAACTTGAGCTAGTTAGATTAATGGAGTTCCAACTTCTTGTCAGGGAGCAACTATAGTGGATCTCTCTGTCAACATCACTCTGTGTCCTGAGTATGAGCTCCCTCCAGAAGCTACTGCACCACCCCCTGTAAGATTCTTGGGAGTGTTCTCTCTTTTTTTTTTTTGGGTTCTGTGTGTGAGCCTGTATGTCACTTCGTATGTTTTCTCTTAGTTGACCAGCTTATTGTCTTAATTGTCGTAGGCCCCAGGAGCTAAAGCACCTGGTGCTGCCGAATCTGCCTTCCGGAAAGCAGAAGATGTGGTTAGCGGCATGCTTGCCAAGGGCTTTATCTTGGGTAAAGATGCACTGAACTCTGCTAAGGCATTTGATGAGAAACACCAGTTATCTTCTACGGCCTCAGCCAAAGTTGCTACATTGGATAAAAAAATTGGGTTCACTGAGAAAATTAGTGCTGGTACATCGTTGGTGAGTGACAAAGTTCGGGAAGTAGACCAGAAGTTTCAGGTTTCCGAGAAGACTAAATCAGCATTTGCAGTTGCAGAGGAAAAAGTTAGCAATGCCGGAACTGCCATCATGAAAAACCGATATGTAATGAGCGGGACTAGCTGGGTTGCCGATGCTTTCAATAAGGTAGCTAAGGCAGCTGGAGAAGTTGGTCAGAAAACAAAAGAGAAAGTCGTGGTGTCCGAAGAAGAACAGAGAAAGAAGACGGTCGAAGATTTTGCTCAGGTTCATCTCTCGGAATCCCCTAAAGCAGCATCTGCACCCCCTGAGCCTCAACAACGTCCCAAGCCCGAACCGGCTCAAGGTCTGATTCTCTGAGTTGTTGTCATGTTTGTTGATATCTATGTCTGAAAGTTCTTGTAGTTGTAATATGTACTCCCCCTTCATTTCTGGCATGGTGGCTATATTTTAGGGTGAAAATATAGAATAGATTTCTTCCTCAATTAGTGGTTGGACTTGATTGCATAAGATATCTTCATTTGTCAGAATACAAGAACAGCAGATTTTTCCATATTGAGAACAAATTCTGCTCTTTCTACTATGCTATGTATCAGTGCAGTTCTGGCTAG

mRNA sequence

ATGGTAATTTTGGACCACTTCGATGTACAAGGAGCCGATGAGAACAACCGGATAGGAATCAGACTGGATGATGGACCTCGAGACGAACGAGCTAGTGGATCAGGCCAAGATCGAATGAACGATCTAGTGGATCAGGCCAAGACCAAAGGGCTAAGATTGAAGACAGAACCTGTAAGTTGCAACGTGGCTCGTCACAGTTTCCGTGCAGAAGGCCGTCCCGTTATGGAAATTCCCCCCGTCCTGTTAACGTTCCGTTTCAAATCCAAGACGGTTTCAGTTTTCCGGCGATCGTCGGTTGATTCCGTCCCCGTTCCGGCGATTTTATCTTCGTCATTTCCAGCGATGTCGGTTAAAACTGTTAAAGTCAGCAATGTCTCCTTGGGAGCGTCTGAACGAGATGTCCAGGAGTTTTTTTCCTTTTCTGGTGACATAGAATATCTGGAAATGCAAAGTGAAAGTGAACGGTCTCAAACTGCTTATGTAACCTTTAAGGATTCACAAGGAGCAGAGACTGCTGTTCTTCTGTCCGGAGCAACTATAGTGGATCTCTCTGTCAACATCACTCTGTGTCCTGAGTATGAGCTCCCTCCAGAAGCTACTGCACCACCCCCTGCCCCAGGAGCTAAAGCACCTGGTGCTGCCGAATCTGCCTTCCGGAAAGCAGAAGATGTGGTTAGCGGCATGCTTGCCAAGGGCTTTATCTTGGGTAAAGATGCACTGAACTCTGCTAAGGCATTTGATGAGAAACACCAGTTATCTTCTACGGCCTCAGCCAAAGTTGCTACATTGGATAAAAAAATTGGGTTCACTGAGAAAATTAGTGCTGGTACATCGTTGGTGAGTGACAAAGTTCGGGAAGTAGACCAGAAGTTTCAGGTTTCCGAGAAGACTAAATCAGCATTTGCAGTTGCAGAGGAAAAAGTTAGCAATGCCGGAACTGCCATCATGAAAAACCGATATGTAATGAGCGGGACTAGCTGGGTTGCCGATGCTTTCAATAAGGTAGCTAAGGCAGCTGGAGAAGTTGGTCAGAAAACAAAAGAGAAAGTCGTGGTGTCCGAAGAAGAACAGAGAAAGAAGACGGTCGAAGATTTTGCTCAGGTTCATCTCTCGGAATCCCCTAAAGCAGCATCTGCACCCCCTGAGCCTCAACAACGTCCCAAGCCCGAACCGGCTCAAGAATACAAGAACAGCAGATTTTTCCATATTGAGAACAAATTCTGCTCTTTCTACTATGCTATGTATCAGTGCAGTTCTGGCTAG

Coding sequence (CDS)

ATGGTAATTTTGGACCACTTCGATGTACAAGGAGCCGATGAGAACAACCGGATAGGAATCAGACTGGATGATGGACCTCGAGACGAACGAGCTAGTGGATCAGGCCAAGATCGAATGAACGATCTAGTGGATCAGGCCAAGACCAAAGGGCTAAGATTGAAGACAGAACCTGTAAGTTGCAACGTGGCTCGTCACAGTTTCCGTGCAGAAGGCCGTCCCGTTATGGAAATTCCCCCCGTCCTGTTAACGTTCCGTTTCAAATCCAAGACGGTTTCAGTTTTCCGGCGATCGTCGGTTGATTCCGTCCCCGTTCCGGCGATTTTATCTTCGTCATTTCCAGCGATGTCGGTTAAAACTGTTAAAGTCAGCAATGTCTCCTTGGGAGCGTCTGAACGAGATGTCCAGGAGTTTTTTTCCTTTTCTGGTGACATAGAATATCTGGAAATGCAAAGTGAAAGTGAACGGTCTCAAACTGCTTATGTAACCTTTAAGGATTCACAAGGAGCAGAGACTGCTGTTCTTCTGTCCGGAGCAACTATAGTGGATCTCTCTGTCAACATCACTCTGTGTCCTGAGTATGAGCTCCCTCCAGAAGCTACTGCACCACCCCCTGCCCCAGGAGCTAAAGCACCTGGTGCTGCCGAATCTGCCTTCCGGAAAGCAGAAGATGTGGTTAGCGGCATGCTTGCCAAGGGCTTTATCTTGGGTAAAGATGCACTGAACTCTGCTAAGGCATTTGATGAGAAACACCAGTTATCTTCTACGGCCTCAGCCAAAGTTGCTACATTGGATAAAAAAATTGGGTTCACTGAGAAAATTAGTGCTGGTACATCGTTGGTGAGTGACAAAGTTCGGGAAGTAGACCAGAAGTTTCAGGTTTCCGAGAAGACTAAATCAGCATTTGCAGTTGCAGAGGAAAAAGTTAGCAATGCCGGAACTGCCATCATGAAAAACCGATATGTAATGAGCGGGACTAGCTGGGTTGCCGATGCTTTCAATAAGGTAGCTAAGGCAGCTGGAGAAGTTGGTCAGAAAACAAAAGAGAAAGTCGTGGTGTCCGAAGAAGAACAGAGAAAGAAGACGGTCGAAGATTTTGCTCAGGTTCATCTCTCGGAATCCCCTAAAGCAGCATCTGCACCCCCTGAGCCTCAACAACGTCCCAAGCCCGAACCGGCTCAAGAATACAAGAACAGCAGATTTTTCCATATTGAGAACAAATTCTGCTCTTTCTACTATGCTATGTATCAGTGCAGTTCTGGCTAG

Protein sequence

MVILDHFDVQGADENNRIGIRLDDGPRDERASGSGQDRMNDLVDQAKTKGLRLKTEPVSCNVARHSFRAEGRPVMEIPPVLLTFRFKSKTVSVFRRSSVDSVPVPAILSSSFPAMSVKTVKVSNVSLGASERDVQEFFSFSGDIEYLEMQSESERSQTAYVTFKDSQGAETAVLLSGATIVDLSVNITLCPEYELPPEATAPPPAPGAKAPGAAESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEKISAGTSLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAGTAIMKNRYVMSGTSWVADAFNKVAKAAGEVGQKTKEKVVVSEEEQRKKTVEDFAQVHLSESPKAASAPPEPQQRPKPEPAQEYKNSRFFHIENKFCSFYYAMYQCSSG

Homology

[Close]

BLAST of Lag0017283 vs. NCBI nr
Match: XP_038906357.1 (binding partner of ACD11 1-like isoform X1 [Benincasa hispida])

HSP 1 Score: 490.7 bits (1262), Expect = 1.2e-134
Identity = 268/280 (95.71%), Postives = 276/280 (98.57%), Query Frame = 0


Query: 115 MSVKTVKVSNVSLGASERDVQEFFSFSGDIEYLEMQSESERSQTAYVTFKDSQGAETAVL 174
           MS+KTVKVSNVSLGASERD++EFFSFSGDIEYLEMQSESERSQ AYVTFKD+QGAETAVL
Sbjct: 1   MSIKTVKVSNVSLGASERDIKEFFSFSGDIEYLEMQSESERSQIAYVTFKDTQGAETAVL 60

Query: 175 LSGATIVDLSVNITLCPEYELPPEATAPPPAPGAKAPGAAESAFRKAEDVVSGMLAKGFI 234
           LSGATIVDLSVNITLCP+YELPPEATAPPPAPG KAPGAAESAFRKAEDVVSGMLAKGFI
Sbjct: 61  LSGATIVDLSVNITLCPDYELPPEATAPPPAPGTKAPGAAESAFRKAEDVVSGMLAKGFI 120

Query: 235 LGKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEKISAGTSLVSDKVREVDQKFQVS 294
           LGKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEKISAGT LVSDKVREVDQKFQVS
Sbjct: 121 LGKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEKISAGTLLVSDKVREVDQKFQVS 180

Query: 295 EKTKSAFAVAEEKVSNAGTAIMKNRYVMSGTSWVADAFNKVAKAAGEVGQKTKEKVVVSE 354
           EKTKSAFAVAEEKVSNAG+AIMKNRYVMSGTSWVADAFNKVAKAAGEVGQKTKEKVVVSE
Sbjct: 181 EKTKSAFAVAEEKVSNAGSAIMKNRYVMSGTSWVADAFNKVAKAAGEVGQKTKEKVVVSE 240

Query: 355 EEQRKKTVEDFAQVHLSESPKAASAPP-EPQQRPKPEPAQ 394
           EEQ+KKTVEDFA+VHLSESPKAASAPP EPQQRPKPEPAQ
Sbjct: 241 EEQKKKTVEDFAKVHLSESPKAASAPPEEPQQRPKPEPAQ 280

[Close]

BLAST of Lag0017283 vs. NCBI nr
Match: XP_038906358.1 (binding partner of ACD11 1-like isoform X2 [Benincasa hispida])

HSP 1 Score: 489.2 bits (1258), Expect = 3.6e-134
Identity = 267/280 (95.36%), Postives = 275/280 (98.21%), Query Frame = 0


Query: 115 MSVKTVKVSNVSLGASERDVQEFFSFSGDIEYLEMQSESERSQTAYVTFKDSQGAETAVL 174
           M +KTVKVSNVSLGASERD++EFFSFSGDIEYLEMQSESERSQ AYVTFKD+QGAETAVL
Sbjct: 1   MQIKTVKVSNVSLGASERDIKEFFSFSGDIEYLEMQSESERSQIAYVTFKDTQGAETAVL 60

Query: 175 LSGATIVDLSVNITLCPEYELPPEATAPPPAPGAKAPGAAESAFRKAEDVVSGMLAKGFI 234
           LSGATIVDLSVNITLCP+YELPPEATAPPPAPG KAPGAAESAFRKAEDVVSGMLAKGFI
Sbjct: 61  LSGATIVDLSVNITLCPDYELPPEATAPPPAPGTKAPGAAESAFRKAEDVVSGMLAKGFI 120

Query: 235 LGKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEKISAGTSLVSDKVREVDQKFQVS 294
           LGKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEKISAGT LVSDKVREVDQKFQVS
Sbjct: 121 LGKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEKISAGTLLVSDKVREVDQKFQVS 180

Query: 295 EKTKSAFAVAEEKVSNAGTAIMKNRYVMSGTSWVADAFNKVAKAAGEVGQKTKEKVVVSE 354
           EKTKSAFAVAEEKVSNAG+AIMKNRYVMSGTSWVADAFNKVAKAAGEVGQKTKEKVVVSE
Sbjct: 181 EKTKSAFAVAEEKVSNAGSAIMKNRYVMSGTSWVADAFNKVAKAAGEVGQKTKEKVVVSE 240

Query: 355 EEQRKKTVEDFAQVHLSESPKAASAPP-EPQQRPKPEPAQ 394
           EEQ+KKTVEDFA+VHLSESPKAASAPP EPQQRPKPEPAQ
Sbjct: 241 EEQKKKTVEDFAKVHLSESPKAASAPPEEPQQRPKPEPAQ 280

[Close]

BLAST of Lag0017283 vs. NCBI nr
Match: XP_008448657.1 (PREDICTED: binding partner of ACD11 1 isoform X1 [Cucumis melo])

HSP 1 Score: 488.4 bits (1256), Expect = 6.1e-134
Identity = 265/280 (94.64%), Postives = 276/280 (98.57%), Query Frame = 0


Query: 115 MSVKTVKVSNVSLGASERDVQEFFSFSGDIEYLEMQSESERSQTAYVTFKDSQGAETAVL 174
           MS+KTVKVSNVSLGASERD++EFFSFSGDIEYLEMQSE+ERSQTAYVTFKD+QGAETAVL
Sbjct: 1   MSIKTVKVSNVSLGASERDIKEFFSFSGDIEYLEMQSETERSQTAYVTFKDAQGAETAVL 60

Query: 175 LSGATIVDLSVNITLCPEYELPPEATAPPPAPGAKAPGAAESAFRKAEDVVSGMLAKGFI 234
           LSGATIVDLSVNITLCP+YELPPEATAPPPAPG K PGAAESAFRKAEDVVSGMLAKGFI
Sbjct: 61  LSGATIVDLSVNITLCPDYELPPEATAPPPAPGTKPPGAAESAFRKAEDVVSGMLAKGFI 120

Query: 235 LGKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEKISAGTSLVSDKVREVDQKFQVS 294
           LGKDALNSAKAFDEKHQL+STASAKVATLDKKIGFTEKISAGTSLVSDKVREVDQKFQVS
Sbjct: 121 LGKDALNSAKAFDEKHQLTSTASAKVATLDKKIGFTEKISAGTSLVSDKVREVDQKFQVS 180

Query: 295 EKTKSAFAVAEEKVSNAGTAIMKNRYVMSGTSWVADAFNKVAKAAGEVGQKTKEKVVVSE 354
           EKTKSAFAVAEEKVSNAG+AIMKNRYVMSGTSWVAD FNKVAKAAGEVGQKTKEKVVV+E
Sbjct: 181 EKTKSAFAVAEEKVSNAGSAIMKNRYVMSGTSWVADTFNKVAKAAGEVGQKTKEKVVVTE 240

Query: 355 EEQRKKTVEDFAQVHLSESPKAASAPP-EPQQRPKPEPAQ 394
           EEQ+KKTVEDFA+VHLSESPKAASAPP EPQQRPKPEPAQ
Sbjct: 241 EEQKKKTVEDFAKVHLSESPKAASAPPEEPQQRPKPEPAQ 280

[Close]

BLAST of Lag0017283 vs. NCBI nr
Match: XP_008448658.1 (PREDICTED: binding partner of ACD11 1 isoform X2 [Cucumis melo])

HSP 1 Score: 486.9 bits (1252), Expect = 1.8e-133
Identity = 264/280 (94.29%), Postives = 275/280 (98.21%), Query Frame = 0


Query: 115 MSVKTVKVSNVSLGASERDVQEFFSFSGDIEYLEMQSESERSQTAYVTFKDSQGAETAVL 174
           M +KTVKVSNVSLGASERD++EFFSFSGDIEYLEMQSE+ERSQTAYVTFKD+QGAETAVL
Sbjct: 1   MQIKTVKVSNVSLGASERDIKEFFSFSGDIEYLEMQSETERSQTAYVTFKDAQGAETAVL 60

Query: 175 LSGATIVDLSVNITLCPEYELPPEATAPPPAPGAKAPGAAESAFRKAEDVVSGMLAKGFI 234
           LSGATIVDLSVNITLCP+YELPPEATAPPPAPG K PGAAESAFRKAEDVVSGMLAKGFI
Sbjct: 61  LSGATIVDLSVNITLCPDYELPPEATAPPPAPGTKPPGAAESAFRKAEDVVSGMLAKGFI 120

Query: 235 LGKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEKISAGTSLVSDKVREVDQKFQVS 294
           LGKDALNSAKAFDEKHQL+STASAKVATLDKKIGFTEKISAGTSLVSDKVREVDQKFQVS
Sbjct: 121 LGKDALNSAKAFDEKHQLTSTASAKVATLDKKIGFTEKISAGTSLVSDKVREVDQKFQVS 180

Query: 295 EKTKSAFAVAEEKVSNAGTAIMKNRYVMSGTSWVADAFNKVAKAAGEVGQKTKEKVVVSE 354
           EKTKSAFAVAEEKVSNAG+AIMKNRYVMSGTSWVAD FNKVAKAAGEVGQKTKEKVVV+E
Sbjct: 181 EKTKSAFAVAEEKVSNAGSAIMKNRYVMSGTSWVADTFNKVAKAAGEVGQKTKEKVVVTE 240

Query: 355 EEQRKKTVEDFAQVHLSESPKAASAPP-EPQQRPKPEPAQ 394
           EEQ+KKTVEDFA+VHLSESPKAASAPP EPQQRPKPEPAQ
Sbjct: 241 EEQKKKTVEDFAKVHLSESPKAASAPPEEPQQRPKPEPAQ 280

[Close]

BLAST of Lag0017283 vs. NCBI nr
Match: KAA0053025.1 (binding partner of ACD11 1 isoform X2 [Cucumis melo var. makuwa] >TYK11480.1 binding partner of ACD11 1 isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 486.9 bits (1252), Expect = 1.8e-133
Identity = 264/280 (94.29%), Postives = 275/280 (98.21%), Query Frame = 0


Query: 115 MSVKTVKVSNVSLGASERDVQEFFSFSGDIEYLEMQSESERSQTAYVTFKDSQGAETAVL 174
           M +KTVKVSNVSLGASERD++EFFSFSGDIEYLEMQSE+ERSQTAYVTFKD+QGAETAVL
Sbjct: 92  MQIKTVKVSNVSLGASERDIKEFFSFSGDIEYLEMQSETERSQTAYVTFKDAQGAETAVL 151

Query: 175 LSGATIVDLSVNITLCPEYELPPEATAPPPAPGAKAPGAAESAFRKAEDVVSGMLAKGFI 234
           LSGATIVDLSVNITLCP+YELPPEATAPPPAPG K PGAAESAFRKAEDVVSGMLAKGFI
Sbjct: 152 LSGATIVDLSVNITLCPDYELPPEATAPPPAPGTKPPGAAESAFRKAEDVVSGMLAKGFI 211

Query: 235 LGKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEKISAGTSLVSDKVREVDQKFQVS 294
           LGKDALNSAKAFDEKHQL+STASAKVATLDKKIGFTEKISAGTSLVSDKVREVDQKFQVS
Sbjct: 212 LGKDALNSAKAFDEKHQLTSTASAKVATLDKKIGFTEKISAGTSLVSDKVREVDQKFQVS 271

Query: 295 EKTKSAFAVAEEKVSNAGTAIMKNRYVMSGTSWVADAFNKVAKAAGEVGQKTKEKVVVSE 354
           EKTKSAFAVAEEKVSNAG+AIMKNRYVMSGTSWVAD FNKVAKAAGEVGQKTKEKVVV+E
Sbjct: 272 EKTKSAFAVAEEKVSNAGSAIMKNRYVMSGTSWVADTFNKVAKAAGEVGQKTKEKVVVTE 331

Query: 355 EEQRKKTVEDFAQVHLSESPKAASAPP-EPQQRPKPEPAQ 394
           EEQ+KKTVEDFA+VHLSESPKAASAPP EPQQRPKPEPAQ
Sbjct: 332 EEQKKKTVEDFAKVHLSESPKAASAPPEEPQQRPKPEPAQ 371

[Close]

BLAST of Lag0017283 vs. ExPASy Swiss-Prot
Match: Q9LFD5 (Binding partner of ACD11 1 OS=Arabidopsis thaliana OX=3702 GN=BPA1 PE=1 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 2.2e-70
Identity = 153/267 (57.30%), Postives = 203/267 (76.03%), Query Frame = 0


Query: 114 AMSVKTVKVSNVSLGASERDVQEFFSFSGDIEYLEMQSESERSQTAYVTFKDSQGAETAV 173
           A  V++VKV N+S GA+E D++EFFSFSG++E +++QS      +AYVTFK++QGAETAV
Sbjct: 2   ASQVRSVKVGNLSSGATEHDIKEFFSFSGEVESIDIQS---NEHSAYVTFKETQGAETAV 61

Query: 174 LLSGATIVDLSVNITLCPEYELPPEATAPPPAPGAKAPGA-AESAFRKAEDVVSGMLAKG 233
           LLSGA+I D SV I L P Y       +PP AP A+   + AES  +KAEDVVS MLAKG
Sbjct: 62  LLSGASIADQSVIIELAPNY-------SPPAAPHAETQSSGAESVVQKAEDVVSSMLAKG 121

Query: 234 FILGKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEKISAGTSLVSDKVREVDQKFQ 293
           FILGKDA+  AKAFDEKH  +STA+A VA+LD+KIG ++K++AGTSLV++K++ VDQ FQ
Sbjct: 122 FILGKDAVGKAKAFDEKHGFTSTATAGVASLDQKIGLSQKLTAGTSLVNEKIKAVDQNFQ 181

Query: 294 VSEKTKSAFAVAEEKVSNAGTAIMKNRYVMSGTSWVADAFNKVAKAAGEVGQKTKEKVVV 353
           V+E+TKS +A AE+ VS+AG+A+MKNRYV++G SW A AFN+VA+AAGEVGQKTKEKV  
Sbjct: 182 VTERTKSVYAAAEQTVSSAGSAVMKNRYVLTGVSWAAGAFNRVAQAAGEVGQKTKEKVEA 241

Query: 354 SEEEQ----RKKTVEDFAQVHLSESPK 376
            +  Q    +++  E ++ +H SE  K
Sbjct: 242 EQPSQPAQSQQQLPEGYSPIHSSEYSK 258

[Close]

BLAST of Lag0017283 vs. ExPASy Swiss-Prot
Match: P87216 (Protein vip1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=vip1 PE=1 SV=1)

HSP 1 Score: 47.4 bits (111), Expect = 4.7e-04
Identity = 45/177 (25.42%), Postives = 81/177 (45.76%), Query Frame = 0


Query: 120 VKVSNVSLGASERDVQEFFSFSGDIEYLEMQSESERSQTAYVTFKDSQGAETAVLLSGAT 179
           V V+N+S   +E+ + +FFSF G +  +  +   E +QTA + F+     +TA+LL  A 
Sbjct: 5   VIVTNISPEVTEKQISDFFSFCGKVSNISTEKSGE-TQTAKIQFERPSATKTALLLQDAL 64

Query: 180 IVDLSVNITLCPEYELPPEATAPPPAPGAKAPGAAESAFRKAEDVVSGMLAKGFILGKDA 239
           +    + IT          A +     GA    AA    +    ++S +L++G+ L    
Sbjct: 65  LGQNKIQIT-----SEDGGAASTTDQGGAGGDQAARQEDKPRSAIISELLSRGYHLSDVT 124

Query: 240 LNSAKAFDEKHQLSSTASAKVATLDKKIGFTEKISAGTSLVSDKVREVDQKFQVSEK 297
           L  +   D+ + +SS        L+  +     ++     V++K  EVD KF +S+K
Sbjct: 125 LEKSIQLDQSYGVSSKFK---GILESALSGVRSVNERYH-VTEKANEVDNKFAISDK 171

[Close]

BLAST of Lag0017283 vs. ExPASy TrEMBL
Match: A0A1S3BK81 (binding partner of ACD11 1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103490760 PE=4 SV=1)

HSP 1 Score: 488.4 bits (1256), Expect = 3.0e-134
Identity = 265/280 (94.64%), Postives = 276/280 (98.57%), Query Frame = 0


Query: 115 MSVKTVKVSNVSLGASERDVQEFFSFSGDIEYLEMQSESERSQTAYVTFKDSQGAETAVL 174
           MS+KTVKVSNVSLGASERD++EFFSFSGDIEYLEMQSE+ERSQTAYVTFKD+QGAETAVL
Sbjct: 1   MSIKTVKVSNVSLGASERDIKEFFSFSGDIEYLEMQSETERSQTAYVTFKDAQGAETAVL 60

Query: 175 LSGATIVDLSVNITLCPEYELPPEATAPPPAPGAKAPGAAESAFRKAEDVVSGMLAKGFI 234
           LSGATIVDLSVNITLCP+YELPPEATAPPPAPG K PGAAESAFRKAEDVVSGMLAKGFI
Sbjct: 61  LSGATIVDLSVNITLCPDYELPPEATAPPPAPGTKPPGAAESAFRKAEDVVSGMLAKGFI 120

Query: 235 LGKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEKISAGTSLVSDKVREVDQKFQVS 294
           LGKDALNSAKAFDEKHQL+STASAKVATLDKKIGFTEKISAGTSLVSDKVREVDQKFQVS
Sbjct: 121 LGKDALNSAKAFDEKHQLTSTASAKVATLDKKIGFTEKISAGTSLVSDKVREVDQKFQVS 180

Query: 295 EKTKSAFAVAEEKVSNAGTAIMKNRYVMSGTSWVADAFNKVAKAAGEVGQKTKEKVVVSE 354
           EKTKSAFAVAEEKVSNAG+AIMKNRYVMSGTSWVAD FNKVAKAAGEVGQKTKEKVVV+E
Sbjct: 181 EKTKSAFAVAEEKVSNAGSAIMKNRYVMSGTSWVADTFNKVAKAAGEVGQKTKEKVVVTE 240

Query: 355 EEQRKKTVEDFAQVHLSESPKAASAPP-EPQQRPKPEPAQ 394
           EEQ+KKTVEDFA+VHLSESPKAASAPP EPQQRPKPEPAQ
Sbjct: 241 EEQKKKTVEDFAKVHLSESPKAASAPPEEPQQRPKPEPAQ 280

[Close]

BLAST of Lag0017283 vs. ExPASy TrEMBL
Match: A0A5A7UH68 (Binding partner of ACD11 1 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold139G001410 PE=4 SV=1)

HSP 1 Score: 486.9 bits (1252), Expect = 8.6e-134
Identity = 264/280 (94.29%), Postives = 275/280 (98.21%), Query Frame = 0


Query: 115 MSVKTVKVSNVSLGASERDVQEFFSFSGDIEYLEMQSESERSQTAYVTFKDSQGAETAVL 174
           M +KTVKVSNVSLGASERD++EFFSFSGDIEYLEMQSE+ERSQTAYVTFKD+QGAETAVL
Sbjct: 92  MQIKTVKVSNVSLGASERDIKEFFSFSGDIEYLEMQSETERSQTAYVTFKDAQGAETAVL 151

Query: 175 LSGATIVDLSVNITLCPEYELPPEATAPPPAPGAKAPGAAESAFRKAEDVVSGMLAKGFI 234
           LSGATIVDLSVNITLCP+YELPPEATAPPPAPG K PGAAESAFRKAEDVVSGMLAKGFI
Sbjct: 152 LSGATIVDLSVNITLCPDYELPPEATAPPPAPGTKPPGAAESAFRKAEDVVSGMLAKGFI 211

Query: 235 LGKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEKISAGTSLVSDKVREVDQKFQVS 294
           LGKDALNSAKAFDEKHQL+STASAKVATLDKKIGFTEKISAGTSLVSDKVREVDQKFQVS
Sbjct: 212 LGKDALNSAKAFDEKHQLTSTASAKVATLDKKIGFTEKISAGTSLVSDKVREVDQKFQVS 271

Query: 295 EKTKSAFAVAEEKVSNAGTAIMKNRYVMSGTSWVADAFNKVAKAAGEVGQKTKEKVVVSE 354
           EKTKSAFAVAEEKVSNAG+AIMKNRYVMSGTSWVAD FNKVAKAAGEVGQKTKEKVVV+E
Sbjct: 272 EKTKSAFAVAEEKVSNAGSAIMKNRYVMSGTSWVADTFNKVAKAAGEVGQKTKEKVVVTE 331

Query: 355 EEQRKKTVEDFAQVHLSESPKAASAPP-EPQQRPKPEPAQ 394
           EEQ+KKTVEDFA+VHLSESPKAASAPP EPQQRPKPEPAQ
Sbjct: 332 EEQKKKTVEDFAKVHLSESPKAASAPPEEPQQRPKPEPAQ 371

[Close]

BLAST of Lag0017283 vs. ExPASy TrEMBL
Match: A0A1S3BK74 (binding partner of ACD11 1 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103490760 PE=4 SV=1)

HSP 1 Score: 486.9 bits (1252), Expect = 8.6e-134
Identity = 264/280 (94.29%), Postives = 275/280 (98.21%), Query Frame = 0


Query: 115 MSVKTVKVSNVSLGASERDVQEFFSFSGDIEYLEMQSESERSQTAYVTFKDSQGAETAVL 174
           M +KTVKVSNVSLGASERD++EFFSFSGDIEYLEMQSE+ERSQTAYVTFKD+QGAETAVL
Sbjct: 1   MQIKTVKVSNVSLGASERDIKEFFSFSGDIEYLEMQSETERSQTAYVTFKDAQGAETAVL 60

Query: 175 LSGATIVDLSVNITLCPEYELPPEATAPPPAPGAKAPGAAESAFRKAEDVVSGMLAKGFI 234
           LSGATIVDLSVNITLCP+YELPPEATAPPPAPG K PGAAESAFRKAEDVVSGMLAKGFI
Sbjct: 61  LSGATIVDLSVNITLCPDYELPPEATAPPPAPGTKPPGAAESAFRKAEDVVSGMLAKGFI 120

Query: 235 LGKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEKISAGTSLVSDKVREVDQKFQVS 294
           LGKDALNSAKAFDEKHQL+STASAKVATLDKKIGFTEKISAGTSLVSDKVREVDQKFQVS
Sbjct: 121 LGKDALNSAKAFDEKHQLTSTASAKVATLDKKIGFTEKISAGTSLVSDKVREVDQKFQVS 180

Query: 295 EKTKSAFAVAEEKVSNAGTAIMKNRYVMSGTSWVADAFNKVAKAAGEVGQKTKEKVVVSE 354
           EKTKSAFAVAEEKVSNAG+AIMKNRYVMSGTSWVAD FNKVAKAAGEVGQKTKEKVVV+E
Sbjct: 181 EKTKSAFAVAEEKVSNAGSAIMKNRYVMSGTSWVADTFNKVAKAAGEVGQKTKEKVVVTE 240

Query: 355 EEQRKKTVEDFAQVHLSESPKAASAPP-EPQQRPKPEPAQ 394
           EEQ+KKTVEDFA+VHLSESPKAASAPP EPQQRPKPEPAQ
Sbjct: 241 EEQKKKTVEDFAKVHLSESPKAASAPPEEPQQRPKPEPAQ 280

[Close]

BLAST of Lag0017283 vs. ExPASy TrEMBL
Match: A0A0A0L545 (RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G008890 PE=4 SV=1)

HSP 1 Score: 484.2 bits (1245), Expect = 5.6e-133
Identity = 262/280 (93.57%), Postives = 275/280 (98.21%), Query Frame = 0


Query: 115 MSVKTVKVSNVSLGASERDVQEFFSFSGDIEYLEMQSESERSQTAYVTFKDSQGAETAVL 174
           MS+KTV+VSNVSLGASERD++EFFSFSGDIEYLEMQSE+ERSQTAYVTFKD+QGAETAVL
Sbjct: 1   MSIKTVQVSNVSLGASERDIKEFFSFSGDIEYLEMQSETERSQTAYVTFKDAQGAETAVL 60

Query: 175 LSGATIVDLSVNITLCPEYELPPEATAPPPAPGAKAPGAAESAFRKAEDVVSGMLAKGFI 234
           LSGATIVDLSVNITLCP+YELPPEATAPPPAPG K PGAAESAFRKAEDVVSGMLAKGFI
Sbjct: 61  LSGATIVDLSVNITLCPDYELPPEATAPPPAPGTKPPGAAESAFRKAEDVVSGMLAKGFI 120

Query: 235 LGKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEKISAGTSLVSDKVREVDQKFQVS 294
           LGKDALNSAKAFDEKHQL+STASAKVAT DKKIGFTEKISAGTSLVSDKVREVDQKFQVS
Sbjct: 121 LGKDALNSAKAFDEKHQLTSTASAKVATFDKKIGFTEKISAGTSLVSDKVREVDQKFQVS 180

Query: 295 EKTKSAFAVAEEKVSNAGTAIMKNRYVMSGTSWVADAFNKVAKAAGEVGQKTKEKVVVSE 354
           EKTKSAFAVAEEKVSNAG+AIMKNRYVMSGTSWVAD FN+VAKAAGEVGQKTKEKVVV+E
Sbjct: 181 EKTKSAFAVAEEKVSNAGSAIMKNRYVMSGTSWVADTFNRVAKAAGEVGQKTKEKVVVTE 240

Query: 355 EEQRKKTVEDFAQVHLSESPKAASAPP-EPQQRPKPEPAQ 394
           EEQ+KKTVEDFA+VHLSESPKAASAPP EPQQRPKPEPAQ
Sbjct: 241 EEQKKKTVEDFAKVHLSESPKAASAPPEEPQQRPKPEPAQ 280

[Close]

BLAST of Lag0017283 vs. ExPASy TrEMBL
Match: A0A6J1CV14 (binding partner of ACD11 1-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111014836 PE=4 SV=1)

HSP 1 Score: 476.1 bits (1224), Expect = 1.5e-130
Identity = 259/279 (92.83%), Postives = 269/279 (96.42%), Query Frame = 0


Query: 115 MSVKTVKVSNVSLGASERDVQEFFSFSGDIEYLEMQSESERSQTAYVTFKDSQGAETAVL 174
           MS+KTVKVSNVSLGAS+RDV+EFFSFSGDIEYLEMQSESERSQTAYVTFKD+QGAETAVL
Sbjct: 1   MSIKTVKVSNVSLGASDRDVKEFFSFSGDIEYLEMQSESERSQTAYVTFKDAQGAETAVL 60

Query: 175 LSGATIVDLSVNITLCPEYELPPEATAPPPAPGAKAPGAAESAFRKAEDVVSGMLAKGFI 234
           LSGATIVDLSVNITLCP+YELPPEATAPP A G  APGAAESAF+KAEDVVSGMLAKGFI
Sbjct: 61  LSGATIVDLSVNITLCPDYELPPEATAPPAATGTTAPGAAESAFQKAEDVVSGMLAKGFI 120

Query: 235 LGKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEKISAGTSLVSDKVREVDQKFQVS 294
           LGKDALNSAKAFDEKHQLSSTASAKVAT DKKIGFTEKISAGT LVSDKVREVDQKFQVS
Sbjct: 121 LGKDALNSAKAFDEKHQLSSTASAKVATFDKKIGFTEKISAGTLLVSDKVREVDQKFQVS 180

Query: 295 EKTKSAFAVAEEKVSNAGTAIMKNRYVMSGTSWVADAFNKVAKAAGEVGQKTKEKVVVSE 354
           EKTKSAFAVAE KVSNAG+AIM NR+VMSGTSWVADAFNKVAKAAGEVGQKTKEK V SE
Sbjct: 181 EKTKSAFAVAEVKVSNAGSAIMNNRFVMSGTSWVADAFNKVAKAAGEVGQKTKEKFVASE 240

Query: 355 EEQRKKTVEDFAQVHLSESPKAASAPPEPQQRPKPEPAQ 394
           EEQ+KKTVEDFAQVHLSESPKAA+APPEPQQRPKPEPAQ
Sbjct: 241 EEQKKKTVEDFAQVHLSESPKAATAPPEPQQRPKPEPAQ 279

[Close]

BLAST of Lag0017283 vs. TAIR 10
Match: AT4G17720.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 342.0 bits (876), Expect = 6.6e-94
Identity = 192/283 (67.84%), Postives = 233/283 (82.33%), Query Frame = 0


Query: 115 MSVKTVKVSNVSLGASERDVQEFFSFSGDIEYLEMQSESERSQTAYVTFKDSQGAETAVL 174
           M++ TVKVSNVSLGA++RD++EFFSFSGDI YLE QSE+ER++ AYVTFKD QGAETAVL
Sbjct: 1   MTMTTVKVSNVSLGATDRDLKEFFSFSGDILYLETQSETERTKLAYVTFKDLQGAETAVL 60

Query: 175 LSGATIVDLSVNITLCPEYELPPEATAP-PPAPGAKAPGAAESAFRKAEDVVSGMLAKGF 234
           LSGATIVD SV +++ P+Y+L PEA A   P    K+P A +S  RKAEDVVS MLAKGF
Sbjct: 61  LSGATIVDSSVIVSMAPDYQLSPEALASLEPKDSNKSPKAGDSVLRKAEDVVSSMLAKGF 120

Query: 235 ILGKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEKISAGTSLVSDKVREVDQKFQV 294
           ILGKDA+  AK+ DEKHQL+STASAKVA+ DKKIGFT+KI+ GT +V +KVREVDQK+QV
Sbjct: 121 ILGKDAIAKAKSVDEKHQLTSTASAKVASFDKKIGFTDKINTGTVVVGEKVREVDQKYQV 180

Query: 295 SEKTKSAFAVAEEKVSNAGTAIMKNRYVMSGTSWVADAFNKVAKAAGEVGQKTKEKVVVS 354
           SEKTKSA A AE+ VSNAG+AIMKNRYV++G +WV  AFNKVAKAA EVGQK KEKV ++
Sbjct: 181 SEKTKSAIAAAEQTVSNAGSAIMKNRYVLTGATWVTGAFNKVAKAAEEVGQKAKEKVGMA 240

Query: 355 EEEQRKKTVEDFAQVHLSESPKAASAPPEPQQRPKPEPAQEYK 397
           EEE ++K V++FA+VHLSESPKAAS+  E ++  K   + E K
Sbjct: 241 EEEDKRKVVDEFARVHLSESPKAASSTQEAERESKLSESPEAK 283

[Close]

BLAST of Lag0017283 vs. TAIR 10
Match: AT5G46870.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 313.9 bits (803), Expect = 1.9e-85
Identity = 181/293 (61.77%), Postives = 232/293 (79.18%), Query Frame = 0


Query: 115 MSVKTVKVSNVSLGASERDVQEFFSFSGDIEYLEMQSESERSQTAYVTFKDSQGAETAVL 174
           MS+ TVKVSNVSL A+ERD++EFFSFSGDI YLE QSE++ S+ AYVTFKD QGAETAVL
Sbjct: 1   MSMVTVKVSNVSLEATERDLKEFFSFSGDIAYLETQSENDGSKLAYVTFKDLQGAETAVL 60

Query: 175 LSGATIVDLSVNITLCPEYELPPEATAP----PPAPGAKAPGAAE-SAFRKAEDVVSGML 234
           L+G+TIVD SV +T+ P+Y+LPP+A A       +  + +P   + S FRKAEDVVSGM+
Sbjct: 61  LTGSTIVDSSVTVTMSPDYQLPPDALASIESLKESNKSSSPTREDVSVFRKAEDVVSGMI 120

Query: 235 AKGFILGKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEKISAGTSLVSDKVREVDQ 294
           +KGF+LGKDA+  AK+ DEKHQL+STASA+V + DK+IGFTEKI+ GT++VS+KV+EVDQ
Sbjct: 121 SKGFVLGKDAIAKAKSLDEKHQLTSTASARVTSFDKRIGFTEKINTGTTVVSEKVKEVDQ 180

Query: 295 KFQVSEKTKSAFAVAEEKVSNAGTAIMKNRYVMSGTSWVADAFNKVAKAAGEVGQKTKEK 354
           KFQV+EKTKSA A AE+ VSNAG+AIMKNRYV++G +WV  AFN+V+KAA EVGQK KEK
Sbjct: 181 KFQVTEKTKSAIAAAEQTVSNAGSAIMKNRYVLTGATWVTGAFNRVSKAAEEVGQKAKEK 240

Query: 355 VVVS--EEEQRKKTVEDFAQVHLSESPKAASAPPEPQQRP--KPEPAQEYKNS 399
           V ++  EEE++KK V++ A VHL+ESPKA     +  + P  K +P +E   S
Sbjct: 241 VGLAEEEEEEKKKVVDEVAIVHLTESPKALDQSEQDSKLPESKSQPHKELNAS 293

[Close]

BLAST of Lag0017283 vs. TAIR 10
Match: AT5G16840.2 (binding partner of acd11 1 )

HSP 1 Score: 271.2 bits (692), Expect = 1.4e-72
Identity = 155/267 (58.05%), Postives = 205/267 (76.78%), Query Frame = 0


Query: 114 AMSVKTVKVSNVSLGASERDVQEFFSFSGDIEYLEMQSESERSQTAYVTFKDSQGAETAV 173
           A  V++VKV N+S GA+E D++EFFSFSG++E +++QS +E S  AYVTFK++QGAETAV
Sbjct: 2   ASQVRSVKVGNLSSGATEHDIKEFFSFSGEVESIDIQSSNEHS--AYVTFKETQGAETAV 61

Query: 174 LLSGATIVDLSVNITLCPEYELPPEATAPPPAPGAKAPGA-AESAFRKAEDVVSGMLAKG 233
           LLSGA+I D SV I L P Y       +PP AP A+   + AES  +KAEDVVS MLAKG
Sbjct: 62  LLSGASIADQSVIIELAPNY-------SPPAAPHAETQSSGAESVVQKAEDVVSSMLAKG 121

Query: 234 FILGKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEKISAGTSLVSDKVREVDQKFQ 293
           FILGKDA+  AKAFDEKH  +STA+A VA+LD+KIG ++K++AGTSLV++K++ VDQ FQ
Sbjct: 122 FILGKDAVGKAKAFDEKHGFTSTATAGVASLDQKIGLSQKLTAGTSLVNEKIKAVDQNFQ 181

Query: 294 VSEKTKSAFAVAEEKVSNAGTAIMKNRYVMSGTSWVADAFNKVAKAAGEVGQKTKEKVVV 353
           V+E+TKS +A AE+ VS+AG+A+MKNRYV++G SW A AFN+VA+AAGEVGQKTKEKV  
Sbjct: 182 VTERTKSVYAAAEQTVSSAGSAVMKNRYVLTGVSWAAGAFNRVAQAAGEVGQKTKEKVEA 241

Query: 354 SEEEQ----RKKTVEDFAQVHLSESPK 376
            +  Q    +++  E ++ +H SE  K
Sbjct: 242 EQPSQPAQSQQQLPEGYSPIHSSEYSK 259

[Close]

BLAST of Lag0017283 vs. TAIR 10
Match: AT5G16840.3 (binding partner of acd11 1 )

HSP 1 Score: 268.9 bits (686), Expect = 7.1e-72
Identity = 153/266 (57.52%), Postives = 204/266 (76.69%), Query Frame = 0


Query: 115 MSVKTVKVSNVSLGASERDVQEFFSFSGDIEYLEMQSESERSQTAYVTFKDSQGAETAVL 174
           M+V++VKV N+S GA+E D++EFFSFSG++E +++QS      +AYVTFK++QGAETAVL
Sbjct: 1   MAVRSVKVGNLSSGATEHDIKEFFSFSGEVESIDIQS---NEHSAYVTFKETQGAETAVL 60

Query: 175 LSGATIVDLSVNITLCPEYELPPEATAPPPAPGAKAPGA-AESAFRKAEDVVSGMLAKGF 234
           LSGA+I D SV I L P Y       +PP AP A+   + AES  +KAEDVVS MLAKGF
Sbjct: 61  LSGASIADQSVIIELAPNY-------SPPAAPHAETQSSGAESVVQKAEDVVSSMLAKGF 120

Query: 235 ILGKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEKISAGTSLVSDKVREVDQKFQV 294
           ILGKDA+  AKAFDEKH  +STA+A VA+LD+KIG ++K++AGTSLV++K++ VDQ FQV
Sbjct: 121 ILGKDAVGKAKAFDEKHGFTSTATAGVASLDQKIGLSQKLTAGTSLVNEKIKAVDQNFQV 180

Query: 295 SEKTKSAFAVAEEKVSNAGTAIMKNRYVMSGTSWVADAFNKVAKAAGEVGQKTKEKVVVS 354
           +E+TKS +A AE+ VS+AG+A+MKNRYV++G SW A AFN+VA+AAGEVGQKTKEKV   
Sbjct: 181 TERTKSVYAAAEQTVSSAGSAVMKNRYVLTGVSWAAGAFNRVAQAAGEVGQKTKEKVEAE 240

Query: 355 EEEQ----RKKTVEDFAQVHLSESPK 376
           +  Q    +++  E ++ +H SE  K
Sbjct: 241 QPSQPAQSQQQLPEGYSPIHSSEYSK 256

[Close]

BLAST of Lag0017283 vs. TAIR 10
Match: AT5G16840.1 (binding partner of acd11 1 )

HSP 1 Score: 267.7 bits (683), Expect = 1.6e-71
Identity = 153/267 (57.30%), Postives = 203/267 (76.03%), Query Frame = 0


Query: 114 AMSVKTVKVSNVSLGASERDVQEFFSFSGDIEYLEMQSESERSQTAYVTFKDSQGAETAV 173
           A  V++VKV N+S GA+E D++EFFSFSG++E +++QS      +AYVTFK++QGAETAV
Sbjct: 2   ASQVRSVKVGNLSSGATEHDIKEFFSFSGEVESIDIQS---NEHSAYVTFKETQGAETAV 61

Query: 174 LLSGATIVDLSVNITLCPEYELPPEATAPPPAPGAKAPGA-AESAFRKAEDVVSGMLAKG 233
           LLSGA+I D SV I L P Y       +PP AP A+   + AES  +KAEDVVS MLAKG
Sbjct: 62  LLSGASIADQSVIIELAPNY-------SPPAAPHAETQSSGAESVVQKAEDVVSSMLAKG 121

Query: 234 FILGKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEKISAGTSLVSDKVREVDQKFQ 293
           FILGKDA+  AKAFDEKH  +STA+A VA+LD+KIG ++K++AGTSLV++K++ VDQ FQ
Sbjct: 122 FILGKDAVGKAKAFDEKHGFTSTATAGVASLDQKIGLSQKLTAGTSLVNEKIKAVDQNFQ 181

Query: 294 VSEKTKSAFAVAEEKVSNAGTAIMKNRYVMSGTSWVADAFNKVAKAAGEVGQKTKEKVVV 353
           V+E+TKS +A AE+ VS+AG+A+MKNRYV++G SW A AFN+VA+AAGEVGQKTKEKV  
Sbjct: 182 VTERTKSVYAAAEQTVSSAGSAVMKNRYVLTGVSWAAGAFNRVAQAAGEVGQKTKEKVEA 241

Query: 354 SEEEQ----RKKTVEDFAQVHLSESPK 376
            +  Q    +++  E ++ +H SE  K
Sbjct: 242 EQPSQPAQSQQQLPEGYSPIHSSEYSK 258

The following BLAST results are available for this feature:

BLAST of Lag0017283 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038906357.1	1.2e-134	95.71	binding partner of ACD11 1-like isoform X1 [Benincasa hispida]	[more]
XP_038906358.1	3.6e-134	95.36	binding partner of ACD11 1-like isoform X2 [Benincasa hispida]	[more]
XP_008448657.1	6.1e-134	94.64	PREDICTED: binding partner of ACD11 1 isoform X1 [Cucumis melo]	[more]
XP_008448658.1	1.8e-133	94.29	PREDICTED: binding partner of ACD11 1 isoform X2 [Cucumis melo]	[more]
KAA0053025.1	1.8e-133	94.29	binding partner of ACD11 1 isoform X2 [Cucumis melo var. makuwa] >TYK11480.1 bin...	[more]

BLAST of Lag0017283 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LFD5	2.2e-70	57.30	Binding partner of ACD11 1 OS=Arabidopsis thaliana OX=3702 GN=BPA1 PE=1 SV=1	[more]
P87216	4.7e-04	25.42	Protein vip1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN...	[more]

BLAST of Lag0017283 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BK81	3.0e-134	94.64	binding partner of ACD11 1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103490760 PE...	[more]
A0A5A7UH68	8.6e-134	94.29	Binding partner of ACD11 1 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A1S3BK74	8.6e-134	94.29	binding partner of ACD11 1 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103490760 PE...	[more]
A0A0A0L545	5.6e-133	93.57	RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G008890 PE=4 SV...	[more]
A0A6J1CV14	1.5e-130	92.83	binding partner of ACD11 1-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC...	[more]

BLAST of Lag0017283 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G17720.1	6.6e-94	67.84	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT5G46870.1	1.9e-85	61.77	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT5G16840.2	1.4e-72	58.05	binding partner of acd11 1	[more]
AT5G16840.3	7.1e-72	57.52	binding partner of acd11 1	[more]
AT5G16840.1	1.6e-71	57.30	binding partner of acd11 1	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 119..188 e-value: 6.5E-6 score: 35.7
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 121..180 e-value: 1.9E-5 score: 24.4
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 118..192 score: 10.291966
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 115..188 e-value: 3.9E-8 score: 35.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 17..40
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 17..35
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 369..395
None	No IPR available	PANTHER	PTHR32343	SERINE/ARGININE-RICH SPLICING FACTOR	coord: 115..377
None	No IPR available	PANTHER	PTHR32343:SF37	BINDING PARTNER OF ACD11 1	coord: 115..377
IPR034360	Vip1-like, RNA recognition motif, plant	CDD	cd12269	RRM_Vip1_like	coord: 120..188 e-value: 9.2439E-30 score: 108.301
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 109..190

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0017283.1	Lag0017283.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003676	nucleic acid binding