Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTTTCACCTCTTCAAAAGTCATCGGAATTTCAGAAAACAACACCTACTACTTCCAATCCATCGCCAGTACTTCACCATTTTCAATTCCCAAATCTTTTAGCCTCCTCCCTCCCCAATCCACCTCCGCCAATCTCAGCTTAGCCCCCATCGCCGGAAAATACTCCGCCGTCCGCTCCGTCGGGTCGCTTCGGCTGAATTCTTCCACCGATGTGAAGAAGAGTCCCATTGTCCGATTCAATTACTATTCTCATCCTGATGATGTTGCGTTGTGTGTAAAAGGGCTGAGAAAAGTCGGAGATTTGCTTAAAACTCAAATGATTGAAAATGTTAAGACGAGGGATTTGGAGGGTAATAAAGACAATTCAGTTTCTGGGGATTCCTTTGCCGGAGAACTTGTCGGATGA
mRNA sequence
ATGGCTTTCACCTCTTCAAAAGTCATCGGAATTTCAGAAAACAACACCTACTACTTCCAATCCATCGCCAGTACTTCACCATTTTCAATTCCCAAATCTTTTAGCCTCCTCCCTCCCCAATCCACCTCCGCCAATCTCAGCTTAGCCCCCATCGCCGGAAAATACTCCGCCGTCCGCTCCGTCGGGTCGCTTCGGCTGAATTCTTCCACCGATGTGAAGAAGAGTCCCATTGTCCGATTCAATTACTATTCTCATCCTGATGATGTTGCGTTGTGTGTAAAAGGGCTGAGAAAAGTCGGAGATTTGCTTAAAACTCAAATGATTGAAAATGTTAAGACGAGGGATTTGGAGGGTAATAAAGACAATTCAGTTTCTGGGGATTCCTTTGCCGGAGAACTTGTCGGATGA
Coding sequence (CDS)
ATGGCTTTCACCTCTTCAAAAGTCATCGGAATTTCAGAAAACAACACCTACTACTTCCAATCCATCGCCAGTACTTCACCATTTTCAATTCCCAAATCTTTTAGCCTCCTCCCTCCCCAATCCACCTCCGCCAATCTCAGCTTAGCCCCCATCGCCGGAAAATACTCCGCCGTCCGCTCCGTCGGGTCGCTTCGGCTGAATTCTTCCACCGATGTGAAGAAGAGTCCCATTGTCCGATTCAATTACTATTCTCATCCTGATGATGTTGCGTTGTGTGTAAAAGGGCTGAGAAAAGTCGGAGATTTGCTTAAAACTCAAATGATTGAAAATGTTAAGACGAGGGATTTGGAGGGTAATAAAGACAATTCAGTTTCTGGGGATTCCTTTGCCGGAGAACTTGTCGGATGA
Protein sequence
MAFTSSKVIGISENNTYYFQSIASTSPFSIPKSFSLLPPQSTSANLSLAPIAGKYSAVRSVGSLRLNSSTDVKKSPIVRFNYYSHPDDVALCVKGLRKVGDLLKTQMIENVKTRDLEGNKDNSVSGDSFAGELVG
Homology
BLAST of Lag0006341 vs. NCBI nr
Match:
XP_023546914.1 ((R)-mandelonitrile lyase 1-like [Cucurbita pepo subsp. pepo])
HSP 1 Score: 187.2 bits (474), Expect = 9.4e-44
Identity = 94/118 (79.66%), Postives = 105/118 (88.98%), Query Frame = 0
Query: 3 FTSSKVIGISENNTYYFQSIASTSPFSIPKSFSLLPPQSTSANLSLAPIAGKYSAVRSVG 62
FTSSKVIGIS NNTYYFQSIASTSPFSIP SFSLLPP ST+ NLS+A I GK+S + SVG
Sbjct: 339 FTSSKVIGISTNNTYYFQSIASTSPFSIPPSFSLLPPNSTTVNLSIATIGGKFSKLTSVG 398
Query: 63 SLRLNSSTDVKKSPIVRFNYYSHPDDVALCVKGLRKVGDLLKTQMIENVKTRDLEGNK 121
SLRLNSSTDVK SPIVRFNYYS+P D+ LCV G+RKVGD LKTQ+I+N+KTRDLEGN+
Sbjct: 399 SLRLNSSTDVKTSPIVRFNYYSNPADIQLCVGGVRKVGDFLKTQIIQNIKTRDLEGNR 456
BLAST of Lag0006341 vs. NCBI nr
Match:
XP_022929724.1 ((R)-mandelonitrile lyase 1-like [Cucurbita moschata])
HSP 1 Score: 186.0 bits (471), Expect = 2.1e-43
Identity = 93/118 (78.81%), Postives = 105/118 (88.98%), Query Frame = 0
Query: 3 FTSSKVIGISENNTYYFQSIASTSPFSIPKSFSLLPPQSTSANLSLAPIAGKYSAVRSVG 62
FTSSKVIGIS NNTYYFQSIASTSPFSIP SFSLLPP STS NL++A I GK+S + SVG
Sbjct: 339 FTSSKVIGISNNNTYYFQSIASTSPFSIPPSFSLLPPNSTSVNLTVATIGGKFSKLASVG 398
Query: 63 SLRLNSSTDVKKSPIVRFNYYSHPDDVALCVKGLRKVGDLLKTQMIENVKTRDLEGNK 121
SLRLNSSTDVK +PIVRFNYYS+P D+ LCV G+RKVGD LKTQ+I+N+KTRDLEGN+
Sbjct: 399 SLRLNSSTDVKTNPIVRFNYYSNPADIQLCVGGVRKVGDFLKTQIIQNIKTRDLEGNR 456
BLAST of Lag0006341 vs. NCBI nr
Match:
KAG7029801.1 ((R)-mandelonitrile lyase 1, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 186.0 bits (471), Expect = 2.1e-43
Identity = 93/118 (78.81%), Postives = 105/118 (88.98%), Query Frame = 0
Query: 3 FTSSKVIGISENNTYYFQSIASTSPFSIPKSFSLLPPQSTSANLSLAPIAGKYSAVRSVG 62
FTSSKVIGIS NNTYYFQSIA+TSPFSIP SFSLLPP STS NL++A I GK+S + SVG
Sbjct: 1268 FTSSKVIGISNNNTYYFQSIATTSPFSIPPSFSLLPPNSTSVNLTVATIGGKFSKLTSVG 1327
Query: 63 SLRLNSSTDVKKSPIVRFNYYSHPDDVALCVKGLRKVGDLLKTQMIENVKTRDLEGNK 121
SLRLNSSTDVK SPIVRFNYYS+P D+ LCV G+RKVGD LKTQ+I+N+KTRDLEGN+
Sbjct: 1328 SLRLNSSTDVKTSPIVRFNYYSNPADIQLCVGGVRKVGDFLKTQIIQNIKTRDLEGNR 1385
BLAST of Lag0006341 vs. NCBI nr
Match:
XP_022997400.1 ((R)-mandelonitrile lyase 1-like isoform X1 [Cucurbita maxima])
HSP 1 Score: 185.3 bits (469), Expect = 3.6e-43
Identity = 92/118 (77.97%), Postives = 105/118 (88.98%), Query Frame = 0
Query: 3 FTSSKVIGISENNTYYFQSIASTSPFSIPKSFSLLPPQSTSANLSLAPIAGKYSAVRSVG 62
FTSSKVIGIS NNTYYFQSIA+TSPFSIP SFSLLPP STS NL++A I GK+S + SVG
Sbjct: 339 FTSSKVIGISNNNTYYFQSIATTSPFSIPPSFSLLPPNSTSVNLTIATIGGKFSKLTSVG 398
Query: 63 SLRLNSSTDVKKSPIVRFNYYSHPDDVALCVKGLRKVGDLLKTQMIENVKTRDLEGNK 121
SLRLNSSTDVK +PIVRFNYYS+P D+ LCV G+RKVGD LKTQ+I+N+KTRDLEGN+
Sbjct: 399 SLRLNSSTDVKTTPIVRFNYYSNPADIQLCVGGVRKVGDFLKTQIIQNIKTRDLEGNR 456
BLAST of Lag0006341 vs. NCBI nr
Match:
XP_022997401.1 ((R)-mandelonitrile lyase 1-like isoform X2 [Cucurbita maxima])
HSP 1 Score: 185.3 bits (469), Expect = 3.6e-43
Identity = 92/118 (77.97%), Postives = 105/118 (88.98%), Query Frame = 0
Query: 3 FTSSKVIGISENNTYYFQSIASTSPFSIPKSFSLLPPQSTSANLSLAPIAGKYSAVRSVG 62
FTSSKVIGIS NNTYYFQSIA+TSPFSIP SFSLLPP STS NL++A I GK+S + SVG
Sbjct: 335 FTSSKVIGISNNNTYYFQSIATTSPFSIPPSFSLLPPNSTSVNLTIATIGGKFSKLTSVG 394
Query: 63 SLRLNSSTDVKKSPIVRFNYYSHPDDVALCVKGLRKVGDLLKTQMIENVKTRDLEGNK 121
SLRLNSSTDVK +PIVRFNYYS+P D+ LCV G+RKVGD LKTQ+I+N+KTRDLEGN+
Sbjct: 395 SLRLNSSTDVKTTPIVRFNYYSNPADIQLCVGGVRKVGDFLKTQIIQNIKTRDLEGNR 452
BLAST of Lag0006341 vs. ExPASy Swiss-Prot
Match:
O24243 ((R)-mandelonitrile lyase 1 OS=Prunus dulcis OX=3755 GN=MDL1 PE=1 SV=1)
HSP 1 Score: 80.1 bits (196), Expect = 2.1e-14
Identity = 49/112 (43.75%), Postives = 70/112 (62.50%), Query Frame = 0
Query: 8 VIGISENNTYYFQSIASTSPFSIPKSFSLLPPQS-TSANLSLAPIAGKYSAVRSVGSLRL 67
V+GI + Y+Q S+ PFS P FSL P S N + A I + S GS+ L
Sbjct: 346 VLGIRSD---YYQVSLSSLPFSTP-PFSLFPTTSYPLPNSTFAHIVSQVPGPLSHGSVTL 405
Query: 68 NSSTDVKKSPIVRFNYYSHPDDVALCVKGLRKVGDLLKTQMIENVKTRDLEG 119
NSS+DV+ +P ++FNYYS+ D+A CV G++K+GDLL+T+ +E K RD+ G
Sbjct: 406 NSSSDVRIAPNIKFNYYSNSTDLANCVSGMKKLGDLLRTKALEPYKARDVLG 453
BLAST of Lag0006341 vs. ExPASy Swiss-Prot
Match:
P52706 ((R)-mandelonitrile lyase 1 OS=Prunus serotina OX=23207 GN=MDL1 PE=1 SV=1)
HSP 1 Score: 78.2 bits (191), Expect = 8.0e-14
Identity = 48/120 (40.00%), Postives = 72/120 (60.00%), Query Frame = 0
Query: 8 VIGISENNTYYFQSIASTSPFSIPKSFSLLPPQS-TSANLSLAPIAGKYSAVRSVGSLRL 67
V+GIS + ++Q S+ PF+ P FS P S N + A A K + S GSL L
Sbjct: 345 VLGISND---FYQCSFSSLPFTTP-PFSFFPSTSYPLPNSTFAHFASKVAGPLSYGSLTL 404
Query: 68 NSSTDVKKSPIVRFNYYSHPDDVALCVKGLRKVGDLLKTQMIENVKTRDLEGNKDNSVSG 127
SS++V+ SP V+FNYYS+P D++ CV G++K+G+LL T ++ K DL G + ++ G
Sbjct: 405 KSSSNVRVSPNVKFNYYSNPTDLSHCVSGMKKIGELLSTDALKPYKVEDLPGIEGFNILG 460
BLAST of Lag0006341 vs. ExPASy Swiss-Prot
Match:
Q945K2 ((R)-mandelonitrile lyase 2 OS=Prunus dulcis OX=3755 GN=MDL2 PE=1 SV=1)
HSP 1 Score: 72.8 bits (177), Expect = 3.4e-12
Identity = 46/120 (38.33%), Postives = 70/120 (58.33%), Query Frame = 0
Query: 8 VIGISENNTYYFQSIASTSPFSIPKSFSLLPPQS-TSANLSLAPIAGKYSAVRSVGSLRL 67
V+GIS + ++Q S+ PF+ P F P S N + A A K + S GSL L
Sbjct: 345 VLGISND---FYQCSFSSLPFTTP-PFGFFPSASYPLPNSTFAHFASKVAGPLSYGSLTL 404
Query: 68 NSSTDVKKSPIVRFNYYSHPDDVALCVKGLRKVGDLLKTQMIENVKTRDLEGNKDNSVSG 127
SS++V+ SP V+FNYYS+ D++ CV G++K+G+LL T ++ K DL G + ++ G
Sbjct: 405 KSSSNVRVSPNVKFNYYSNLTDLSHCVSGMKKIGELLSTDALKPYKVEDLPGVEGFNILG 460
BLAST of Lag0006341 vs. ExPASy Swiss-Prot
Match:
P52707 ((R)-mandelonitrile lyase 3 OS=Prunus serotina OX=23207 GN=MDL3 PE=2 SV=1)
HSP 1 Score: 71.6 bits (174), Expect = 7.5e-12
Identity = 44/112 (39.29%), Postives = 65/112 (58.04%), Query Frame = 0
Query: 8 VIGISENNTYYFQSIASTSPFSIPKSFSLLPPQS-TSANLSLAPIAGKYSAVRSVGSLRL 67
V+GI+ + ++Q S+ PF P FS P S N + A I K S G++ L
Sbjct: 346 VLGITSD---FYQCSISSLPFDTP-PFSFFPTTSYPLPNQTFAHIVNKVPGPLSHGTVTL 405
Query: 68 NSSTDVKKSPIVRFNYYSHPDDVALCVKGLRKVGDLLKTQMIENVKTRDLEG 119
NSS+DV+ P V+FNYYS+ D++ CV G++K+G++L T +E K DL G
Sbjct: 406 NSSSDVRVGPNVKFNYYSNLTDLSHCVSGMKKLGEVLSTDALEPYKVEDLPG 453
BLAST of Lag0006341 vs. ExPASy Swiss-Prot
Match:
Q9SSM2 ((R)-mandelonitrile lyase-like OS=Arabidopsis thaliana OX=3702 GN=At1g73050 PE=2 SV=1)
HSP 1 Score: 68.9 bits (167), Expect = 4.9e-11
Identity = 36/114 (31.58%), Postives = 70/114 (61.40%), Query Frame = 0
Query: 7 KVIGISENNTYYFQSIASTSPFSIPKSFSLLPPQSTSANLSLAPIAGKYSAVRSVGSLRL 66
+V+G++E+ + ++ ++ PF+ P + ++ + + I K S+G LRL
Sbjct: 349 QVVGVTEDGA-FLEAASNVIPFASPLHSVFIRAPASPLYVPVTTIMEKILGPVSIGLLRL 408
Query: 67 NSSTDVKKSPIVRFNYYSHPDDVALCVKGLRKVGDLLKTQMIENVKTRDLEGNK 121
+STDV+ +P+VRFNY+S P D+ CV G RK+G++L+++ +++ R+ GN+
Sbjct: 409 -ASTDVRINPVVRFNYFSDPQDLERCVNGTRKIGEILRSRAMQDFMIREWFGNR 460
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_023546914.1 | 9.4e-44 | 79.66 | (R)-mandelonitrile lyase 1-like [Cucurbita pepo subsp. pepo] | [more] |
XP_022929724.1 | 2.1e-43 | 78.81 | (R)-mandelonitrile lyase 1-like [Cucurbita moschata] | [more] |
KAG7029801.1 | 2.1e-43 | 78.81 | (R)-mandelonitrile lyase 1, partial [Cucurbita argyrosperma subsp. argyrosperma] | [more] |
XP_022997400.1 | 3.6e-43 | 77.97 | (R)-mandelonitrile lyase 1-like isoform X1 [Cucurbita maxima] | [more] |
XP_022997401.1 | 3.6e-43 | 77.97 | (R)-mandelonitrile lyase 1-like isoform X2 [Cucurbita maxima] | [more] |
Match Name | E-value | Identity | Description | |
O24243 | 2.1e-14 | 43.75 | (R)-mandelonitrile lyase 1 OS=Prunus dulcis OX=3755 GN=MDL1 PE=1 SV=1 | [more] |
P52706 | 8.0e-14 | 40.00 | (R)-mandelonitrile lyase 1 OS=Prunus serotina OX=23207 GN=MDL1 PE=1 SV=1 | [more] |
Q945K2 | 3.4e-12 | 38.33 | (R)-mandelonitrile lyase 2 OS=Prunus dulcis OX=3755 GN=MDL2 PE=1 SV=1 | [more] |
P52707 | 7.5e-12 | 39.29 | (R)-mandelonitrile lyase 3 OS=Prunus serotina OX=23207 GN=MDL3 PE=2 SV=1 | [more] |
Q9SSM2 | 4.9e-11 | 31.58 | (R)-mandelonitrile lyase-like OS=Arabidopsis thaliana OX=3702 GN=At1g73050 PE=2 ... | [more] |