Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCACGTGGCAATTGGACCCAAGCCCAAGCCCATATGAGGTCATCAAACTCTATAAATAGAGGAGGTCACCATTCAGATTCGGGAGATTCAGCCAGAGGCAGAGAGGGCAGAGTCCAGAGCATTCTCCCAAGATTGACCGATCAAGAAGATCAACAAGTCAGCAGGCCGATCATCTAAAAAGAGATCAACAAGCTAACTGACCGATCAAGAAGATCAACAAGTCAGTAGGCCGATCATCCAAGAAGATCAACAAGCCAACCGACCGATCAAGAGGATCAACAAGTCAGCGGGTCGATCATCCAAGAGGATCAACAAGCTAACAATCTGATCCAACAGATCATCAAGCCAACAGGCCGATCCAAGAGATCATCAAGTTAACAGACTGATCATCCAAGAGGATCAACAAGCTAACAAGTCGATCCAACAGATCATCAAGCCAACAGGCTGATCCAAGAGATCAACAAGCCAACCGACCGATCAAGAAGATCAACAAGTCAGCAGGCCGATCATCCAAGAAGATCAACAAGCCAACCGATCGAACAGATCATCAAGCCAACAGGCCGATCAAGAAGGTCAACAAGTCAGCAGGCCGATCATCCAAGAGGATCAACAAGCTAACAAGTCGATTCAACAGATCATCAAGCCAACAGGCCGATCCAAGAGATCATCAAGTCAGCAGGCCGATCATCCAAGAGGATCAACAAGCTAACAAGCCGATCCAAGAGATCATCAACCTAGCAGGCCGATCATCCAAGAAGCTCAACAAACCAGTCCAAGAAGATCAACAAGCTAGAGAACAAAGTTTATATATTTAAGAGAGAGAATCAGAGGATTAAAGTTAGAGATTGTACACCCACACGCATACAACATTAATACAATATATTATTTATTCCACATGTCTCCATCCCCGAAGTTACGTGTGAACAAATTGGCACGCCCGGTGGGACAATCTCTACCTCTCATCCCTCTCTCTTATCTAAAAACATAAAAGTAAACATGTCATTCAAGACTTCTTTGATGACCGTTGTCAAGAACAAGTCTTACATCAGTTCTACTGCCCATTGTTGCTTCAATGAACTGAGGTTGCAAGAAGATAAAGCTTCTATCATTGCAAGCGAAGAAACAACCTTGTAGGGGCATATACCAACGACAAGTTTCTTGTTAAGTATAACCCTCTGTTTGAACCTGATTCTGACGTAGTGACTGTCATGATGACTGAGACAAGAACTACGGAAGAAAGAATGACTGAGATGCAAGAACACATCAACAATTTGATGAAGGCGATTGAAGAAAAAGATTCTCATATCGCGCAACTAAAGTGCCAAATTGAGAACCAACATATCGCCGAATCAAGTCAAACCCAAGTCATAAAAAATCATGACAAAGGAAAGACTACAGTGCAAGATGATCAGCCACATTGTTCTGCTTCGGTCGCTTCACTATCCATCCAACAGCTCCAAGATATGATCACAAACTGTATCAGAGCTCAGTACGGTGGACCTACTCAAGATTCCCTCTTATATTCCAAACCTTATACTAAGAGGATTGATAACTTGAGAATGCCAATCGGGTATCAGCCACCAAAATTTCAGCAGTTCGATGGAAGGGGCAATCCTAAACAACATATTGCTCACTTCGTTGAGACATGCGAGAACGCTGGTACTCGAGGGGACCTACTAGTCAAACAGCTCGTTCGAACACTTAAAGGAAATGCTTTTGACTGGTACACTGATCTAGAACCTGAGTCAATAGACAGTTGGGAGGAACTCGAAAGAGAGTTCTTGAATCGCTTCTACAGCACTAGAAGAACCGTTAGCATGTTCGAGCTAACCAACACTCACACGCATACAACATTAATACATATTTTATGCTAGTTGAATTATACTCTGTGTTATAGGTAATTTTGGACCACCATGGCGTACAAGAAGCTGACGAGGACAACCGGGCAGAAAAAGAGTTGAGGAATGGATCCAAAGGGCAAAACCGGCAAGTGGGACGGGCCAAGACCGAAGGGGTCGGCCAAAGGCCAAAGGCCGAGGCCGACCCTCGACCCGCCTGCGCGGGCCGGGCTTGTCCGGCTCCGCTTGGTCCCCACCGTCTCTGGCCGCCTCGGTTCAGCCTGTTTGAGCAGGTATTTATATCCCTCTTCGCCACCGAAGAAGGGGACTCAAACTCTAATCCCGAAACTCATTATATATTCTCTACTCTCTCCTCTTGCTCTTACTTTTCCGCTCCCCACCGTTCTGCTCGCTGA
mRNA sequence
ATGCCACGTGGCAATTGGACCCAAGCCCAAGCCCATATGAGGTCATCAAACTCTATAAATAGAGGAGGTCACCATTCAGATTCGGGAGATTCAGCCAGAGGCAGAGAGGGCAGAGTCCAGAGCATTCTCCCAAGATTGACCGATCAAGAAGATCAACAACTAACAAGTCGATCCAACAGATCATCAAGCCAACAGGCTGATCCAAGAGATCAACAAGCCAACCGACCGATCAAGAAGATCAACAAGTCAGCAGGCCGATCATCCAAGAAGATCAACAAGCCAACCGATCGAACAGATCATCAAGCCAACAGGCCGATCAAGAAGGTCAACAAGTCAGCAGGCCGATCATCCAAGAGGATCAACAAGCTAACAAGTCGATTCAACAGATCATCAAGCCAACAGGCCGATCCAAGAGATCATCAAGTCAGCAGGCCGATCATCCAAGAGGATCAACAAGCTAACAAGCCGATCCAAGAGATCATCAACCTAGCAGGCCGATCATCCAAGAAGCTCAACAAACCAGTCCAAGAAGATCAACAAGCTAGAGAACAAAGGGCATATACCAACGACAAGTTTCTTGTTAAGTATAACCCTCTGTTTGAACCTGATTCTGACGTAGTGACTGTCATGATGACTGAGACAAGAACTACGGAAGAAAGAATGACTGAGATGCAAGAACACATCAACAATTTGATGAAGGCGATTGAAGAAAAAGATTCTCATATCGCGCAACTAAAGTGCCAAATTGAGAACCAACATATCGCCGAATCAAGTCAAACCCAAGTCATAAAAAATCATGACAAAGGAAAGACTACAGTGCAAGATGATCAGCCACATTGTTCTGCTTCGGTCGCTTCACTATCCATCCAACAGCTCCAAGATATGATCACAAACTGTATCAGAGCTCAGTACGGTGGACCTACTCAAGATTCCCTCTTATATTCCAAACCTTATACTAAGAGGATTGATAACTTGAGAATGCCAATCGGGTATCAGCCACCAAAATTTCAGCAGTTCGATGGAAGGGGCAATCCTAAACAACATATTGCTCACTTCGTTGAGACATGCGAGAACGCTGGTACTCGAGGGGACCTACTAGTCAAACAGCTCGTTCGAACACTTAAAGGAAATGCTTTTGACTGGTACACTGATCTAGAACCTGAGTCAATAGACAGTTGGGAGGAACTCGAAAGAGAGTTCTTGAATCGCTTCTACAGCACTAGAAGAACCGTAATTTTGGACCACCATGGCGTACAAGAAGCTGACGAGGACAACCGGGCAGAAAAAGAGTTGAGGAATGGATCCAAAGGGCAAAACCGGCAAGTGGGACGGGCCAAGACCGAAGGGGTCGGCCAAAGGCCAAAGGCCGAGGCCGACCCTCGACCCGCCTGCGCGGGCCGGGCTTGTCCGGCTCCGCTTGGTCCCCACCGTCTCTGGCCGCCTCGGTTCAGCCTGTTTGAGCAGGTATTTATATCCCTCTTCGCCACCGAAGAAGGGGACTCAAACTCTAATCCCGAAACTCATTATATATTCTCTACTCTCTCCTCTTGCTCTTACTTTTCCGCTCCCCACCGTTCTGCTCGCTGA
Coding sequence (CDS)
ATGCCACGTGGCAATTGGACCCAAGCCCAAGCCCATATGAGGTCATCAAACTCTATAAATAGAGGAGGTCACCATTCAGATTCGGGAGATTCAGCCAGAGGCAGAGAGGGCAGAGTCCAGAGCATTCTCCCAAGATTGACCGATCAAGAAGATCAACAACTAACAAGTCGATCCAACAGATCATCAAGCCAACAGGCTGATCCAAGAGATCAACAAGCCAACCGACCGATCAAGAAGATCAACAAGTCAGCAGGCCGATCATCCAAGAAGATCAACAAGCCAACCGATCGAACAGATCATCAAGCCAACAGGCCGATCAAGAAGGTCAACAAGTCAGCAGGCCGATCATCCAAGAGGATCAACAAGCTAACAAGTCGATTCAACAGATCATCAAGCCAACAGGCCGATCCAAGAGATCATCAAGTCAGCAGGCCGATCATCCAAGAGGATCAACAAGCTAACAAGCCGATCCAAGAGATCATCAACCTAGCAGGCCGATCATCCAAGAAGCTCAACAAACCAGTCCAAGAAGATCAACAAGCTAGAGAACAAAGGGCATATACCAACGACAAGTTTCTTGTTAAGTATAACCCTCTGTTTGAACCTGATTCTGACGTAGTGACTGTCATGATGACTGAGACAAGAACTACGGAAGAAAGAATGACTGAGATGCAAGAACACATCAACAATTTGATGAAGGCGATTGAAGAAAAAGATTCTCATATCGCGCAACTAAAGTGCCAAATTGAGAACCAACATATCGCCGAATCAAGTCAAACCCAAGTCATAAAAAATCATGACAAAGGAAAGACTACAGTGCAAGATGATCAGCCACATTGTTCTGCTTCGGTCGCTTCACTATCCATCCAACAGCTCCAAGATATGATCACAAACTGTATCAGAGCTCAGTACGGTGGACCTACTCAAGATTCCCTCTTATATTCCAAACCTTATACTAAGAGGATTGATAACTTGAGAATGCCAATCGGGTATCAGCCACCAAAATTTCAGCAGTTCGATGGAAGGGGCAATCCTAAACAACATATTGCTCACTTCGTTGAGACATGCGAGAACGCTGGTACTCGAGGGGACCTACTAGTCAAACAGCTCGTTCGAACACTTAAAGGAAATGCTTTTGACTGGTACACTGATCTAGAACCTGAGTCAATAGACAGTTGGGAGGAACTCGAAAGAGAGTTCTTGAATCGCTTCTACAGCACTAGAAGAACCGTAATTTTGGACCACCATGGCGTACAAGAAGCTGACGAGGACAACCGGGCAGAAAAAGAGTTGAGGAATGGATCCAAAGGGCAAAACCGGCAAGTGGGACGGGCCAAGACCGAAGGGGTCGGCCAAAGGCCAAAGGCCGAGGCCGACCCTCGACCCGCCTGCGCGGGCCGGGCTTGTCCGGCTCCGCTTGGTCCCCACCGTCTCTGGCCGCCTCGGTTCAGCCTGTTTGAGCAGGTATTTATATCCCTCTTCGCCACCGAAGAAGGGGACTCAAACTCTAATCCCGAAACTCATTATATATTCTCTACTCTCTCCTCTTGCTCTTACTTTTCCGCTCCCCACCGTTCTGCTCGCTGA
Protein sequence
MPRGNWTQAQAHMRSSNSINRGGHHSDSGDSARGREGRVQSILPRLTDQEDQQLTSRSNRSSSQQADPRDQQANRPIKKINKSAGRSSKKINKPTDRTDHQANRPIKKVNKSAGRSSKRINKLTSRFNRSSSQQADPRDHQVSRPIIQEDQQANKPIQEIINLAGRSSKKLNKPVQEDQQAREQRAYTNDKFLVKYNPLFEPDSDVVTVMMTETRTTEERMTEMQEHINNLMKAIEEKDSHIAQLKCQIENQHIAESSQTQVIKNHDKGKTTVQDDQPHCSASVASLSIQQLQDMITNCIRAQYGGPTQDSLLYSKPYTKRIDNLRMPIGYQPPKFQQFDGRGNPKQHIAHFVETCENAGTRGDLLVKQLVRTLKGNAFDWYTDLEPESIDSWEELEREFLNRFYSTRRTVILDHHGVQEADEDNRAEKELRNGSKGQNRQVGRAKTEGVGQRPKAEADPRPACAGRACPAPLGPHRLWPPRFSLFEQVFISLFATEEGDSNSNPETHYIFSTLSSCSYFSAPHRSAR
Homology
BLAST of Lag0006238 vs. NCBI nr
Match:
KAA0047477.1 (uncharacterized protein E6C27_scaffold498G00940 [Cucumis melo var. makuwa])
HSP 1 Score: 305.8 bits (782), Expect = 7.1e-79
Identity = 151/243 (62.14%), Postives = 188/243 (77.37%), Query Frame = 0
Query: 169 KKLNKPVQEDQQAREQRAYTNDKFLVKYNPLFEPDSDVVTVMMTETRTTEERMTEMQEHI 228
++++KP + +E A L + + P ++++VM+T+ T+E+RM E+++ +
Sbjct: 44 EQISKPPKGGIVIKENPAMDEHNSLSERSNEEVPQPNIMSVMVTDVDTSEDRMAELEKKV 103
Query: 229 NNLMKAIEEKDSHIAQLKCQIENQHIAESSQTQVIKNHDKGKTTVQDDQPHCSASVASLS 288
N LMKA+EE+D IA LK IE++ AESS T IKN +KGK +Q+ QP S S+ASLS
Sbjct: 104 NMLMKAVEERDFEIALLKNHIESRDAAESSHTHTIKNANKGKAIMQESQPQNSTSIASLS 163
Query: 289 IQQLQDMITNCIRAQYGGPTQDSLLYSKPYTKRIDNLRMPIGYQPPKFQQFDGRGNPKQH 348
+QQLQ+MI N I+ QYGGP Q LYSKPYTKRIDN+RMP GYQPPKFQQFDG+GNPKQH
Sbjct: 164 VQQLQEMIANSIKTQYGGPAQTFSLYSKPYTKRIDNMRMPHGYQPPKFQQFDGKGNPKQH 223
Query: 349 IAHFVETCENAGTRGDLLVKQLVRTLKGNAFDWYTDLEPESIDSWEELEREFLNRFYSTR 408
+AHF+ETCE AGTRGDLLVKQ VRTLKGNAFDWYTDLEPESIDSWE+LER+FLNRFYSTR
Sbjct: 224 VAHFIETCETAGTRGDLLVKQFVRTLKGNAFDWYTDLEPESIDSWEQLERDFLNRFYSTR 283
Query: 409 RTV 412
R V
Sbjct: 284 RIV 286
BLAST of Lag0006238 vs. NCBI nr
Match:
XP_031742199.1 (uncharacterized protein LOC105435721 [Cucumis sativus])
HSP 1 Score: 302.4 bits (773), Expect = 7.8e-78
Identity = 168/291 (57.73%), Postives = 204/291 (70.10%), Query Frame = 0
Query: 122 KLTSRFNRSSSQQADPRDHQVSRPIIQEDQQANKPIQEIINLAGRSSKKLNKPVQEDQQA 181
K S+ + +S P S+ IIQ Q + Q I+ K+L + +
Sbjct: 5 KAASKSSAASDTYTGPITRSRSKGIIQGQDQGSAIAQSIL-------KQLMESPKAGIVI 64
Query: 182 REQRAYTNDKFLVKYNPLFEPDSDVVTVMMTETRTTEERMTEMQEHINNLMKAIEEKDSH 241
+E Y ND L E DV++VMM + E M EM+ IN LMK ++E+D
Sbjct: 65 KENPLY-NDYDSASSRSLKEAHPDVMSVMMADV-AVETAMAEMERKINLLMKVVDERDHE 124
Query: 242 IAQLKCQIENQHIAESSQTQVIKNHDKGKTTVQDDQP-HCSASVASLSIQQLQDMITNCI 301
IA LK Q++ + AESSQT V+K DKGK VQ++QP S SVASLS+QQLQDMITN I
Sbjct: 125 IAALKEQMQTRETAESSQTPVVKVDDKGKNVVQENQPQQQSTSVASLSVQQLQDMITNSI 184
Query: 302 RAQYGGPTQDSLLYSKPYTKRIDNLRMPIGYQPPKFQQFDGRGNPKQHIAHFVETCENAG 361
RAQYGGP+Q S +YSKPYTKRIDNLRMP+GYQPPKFQQFDG+GNPKQH+AHFVETCENAG
Sbjct: 185 RAQYGGPSQTSFMYSKPYTKRIDNLRMPLGYQPPKFQQFDGKGNPKQHVAHFVETCENAG 244
Query: 362 TRGDLLVKQLVRTLKGNAFDWYTDLEPESIDSWEELEREFLNRFYSTRRTV 412
+RGD LV+Q VR+LKGNAF+WYTDLEPESI+SWE+LE+EFLNRFYSTRRTV
Sbjct: 245 SRGDQLVRQFVRSLKGNAFEWYTDLEPESIESWEQLEKEFLNRFYSTRRTV 286
BLAST of Lag0006238 vs. NCBI nr
Match:
XP_031735972.1 (uncharacterized protein LOC116401693 [Cucumis sativus])
HSP 1 Score: 302.4 bits (773), Expect = 7.8e-78
Identity = 168/291 (57.73%), Postives = 204/291 (70.10%), Query Frame = 0
Query: 122 KLTSRFNRSSSQQADPRDHQVSRPIIQEDQQANKPIQEIINLAGRSSKKLNKPVQEDQQA 181
K S+ + +S P S+ IIQ Q + Q I+ K+L + +
Sbjct: 5 KAASKSSAASDTYTGPITRSRSKGIIQGQDQGSAIAQSIL-------KQLMESPKAGIVI 64
Query: 182 REQRAYTNDKFLVKYNPLFEPDSDVVTVMMTETRTTEERMTEMQEHINNLMKAIEEKDSH 241
+E Y ND L E DV++VMM + E M EM+ IN LMK ++E+D
Sbjct: 65 KENPLY-NDYDSASSRSLKEAHPDVMSVMMADV-AVETAMAEMERKINLLMKVVDERDHE 124
Query: 242 IAQLKCQIENQHIAESSQTQVIKNHDKGKTTVQDDQP-HCSASVASLSIQQLQDMITNCI 301
IA LK Q++ + AESSQT V+K DKGK VQ++QP S SVASLS+QQLQDMITN I
Sbjct: 125 IAALKEQMQTRETAESSQTPVVKVDDKGKNVVQENQPQQQSTSVASLSVQQLQDMITNSI 184
Query: 302 RAQYGGPTQDSLLYSKPYTKRIDNLRMPIGYQPPKFQQFDGRGNPKQHIAHFVETCENAG 361
RAQYGGP+Q S +YSKPYTKRIDNLRMP+GYQPPKFQQFDG+GNPKQH+AHFVETCENAG
Sbjct: 185 RAQYGGPSQTSFMYSKPYTKRIDNLRMPLGYQPPKFQQFDGKGNPKQHVAHFVETCENAG 244
Query: 362 TRGDLLVKQLVRTLKGNAFDWYTDLEPESIDSWEELEREFLNRFYSTRRTV 412
+RGD LV+Q VR+LKGNAF+WYTDLEPESI+SWE+LE+EFLNRFYSTRRTV
Sbjct: 245 SRGDQLVRQFVRSLKGNAFEWYTDLEPESIESWEQLEKEFLNRFYSTRRTV 286
BLAST of Lag0006238 vs. NCBI nr
Match:
XP_031739134.1 (uncharacterized protein LOC116402863 [Cucumis sativus])
HSP 1 Score: 300.4 bits (768), Expect = 3.0e-77
Identity = 167/291 (57.39%), Postives = 204/291 (70.10%), Query Frame = 0
Query: 122 KLTSRFNRSSSQQADPRDHQVSRPIIQEDQQANKPIQEIINLAGRSSKKLNKPVQEDQQA 181
K S+ + +S P S+ IIQ Q + Q I+ K+L + +
Sbjct: 5 KAASKSSAASDTYTGPITRSRSKGIIQGQDQGSAIAQSIL-------KQLMESPKAGIVI 64
Query: 182 REQRAYTNDKFLVKYNPLFEPDSDVVTVMMTETRTTEERMTEMQEHINNLMKAIEEKDSH 241
+E Y ND L E DV++VMM + E M EM+ IN LMK ++E+D
Sbjct: 65 KENPLY-NDYDSASSRSLKEAHPDVMSVMMADV-AVETAMAEMERKINLLMKVVDERDHE 124
Query: 242 IAQLKCQIENQHIAESSQTQVIKNHDKGKTTVQDDQP-HCSASVASLSIQQLQDMITNCI 301
IA LK Q++ + AESSQT V+K DKGK VQ++QP S SVASLS+QQLQDMIT+ I
Sbjct: 125 IAALKEQMQTRETAESSQTPVVKVDDKGKNVVQENQPQQQSTSVASLSVQQLQDMITSSI 184
Query: 302 RAQYGGPTQDSLLYSKPYTKRIDNLRMPIGYQPPKFQQFDGRGNPKQHIAHFVETCENAG 361
RAQYGGP+Q S +YSKPYTKRIDNLRMP+GYQPPKFQQFDG+GNPKQH+AHFVETCENAG
Sbjct: 185 RAQYGGPSQTSFMYSKPYTKRIDNLRMPLGYQPPKFQQFDGKGNPKQHVAHFVETCENAG 244
Query: 362 TRGDLLVKQLVRTLKGNAFDWYTDLEPESIDSWEELEREFLNRFYSTRRTV 412
+RGD LV+Q VR+LKGNAF+WYTDLEPESI+SWE+LE+EFLNRFYSTRRTV
Sbjct: 245 SRGDQLVRQFVRSLKGNAFEWYTDLEPESIESWEQLEKEFLNRFYSTRRTV 286
BLAST of Lag0006238 vs. NCBI nr
Match:
XP_031742032.1 (uncharacterized protein LOC116404025 [Cucumis sativus])
HSP 1 Score: 300.4 bits (768), Expect = 3.0e-77
Identity = 167/291 (57.39%), Postives = 204/291 (70.10%), Query Frame = 0
Query: 122 KLTSRFNRSSSQQADPRDHQVSRPIIQEDQQANKPIQEIINLAGRSSKKLNKPVQEDQQA 181
K S+ + +S P S+ IIQ Q + Q I+ K+L + +
Sbjct: 5 KAASKSSAASDTYTGPITRSRSKGIIQGQDQGSAIAQSIL-------KQLMESPKAGIVI 64
Query: 182 REQRAYTNDKFLVKYNPLFEPDSDVVTVMMTETRTTEERMTEMQEHINNLMKAIEEKDSH 241
+E Y ND L E DV++VMM + E M EM+ IN LMK ++E+D
Sbjct: 65 KENPLY-NDYDSASSRSLKEAHPDVMSVMMADV-AVETAMAEMERKINLLMKVVDERDHE 124
Query: 242 IAQLKCQIENQHIAESSQTQVIKNHDKGKTTVQDDQP-HCSASVASLSIQQLQDMITNCI 301
IA LK Q++ + AESSQT V+K DKGK VQ++QP S SVASLS+QQLQDMIT+ I
Sbjct: 125 IAALKEQMQTRETAESSQTPVVKVDDKGKNVVQENQPQQQSTSVASLSVQQLQDMITSSI 184
Query: 302 RAQYGGPTQDSLLYSKPYTKRIDNLRMPIGYQPPKFQQFDGRGNPKQHIAHFVETCENAG 361
RAQYGGP+Q S +YSKPYTKRIDNLRMP+GYQPPKFQQFDG+GNPKQH+AHFVETCENAG
Sbjct: 185 RAQYGGPSQTSFMYSKPYTKRIDNLRMPLGYQPPKFQQFDGKGNPKQHVAHFVETCENAG 244
Query: 362 TRGDLLVKQLVRTLKGNAFDWYTDLEPESIDSWEELEREFLNRFYSTRRTV 412
+RGD LV+Q VR+LKGNAF+WYTDLEPESI+SWE+LE+EFLNRFYSTRRTV
Sbjct: 245 SRGDQLVRQFVRSLKGNAFEWYTDLEPESIESWEQLEKEFLNRFYSTRRTV 286
BLAST of Lag0006238 vs. ExPASy TrEMBL
Match:
A0A5A7TZU9 (Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold498G00940 PE=4 SV=1)
HSP 1 Score: 305.8 bits (782), Expect = 3.4e-79
Identity = 151/243 (62.14%), Postives = 188/243 (77.37%), Query Frame = 0
Query: 169 KKLNKPVQEDQQAREQRAYTNDKFLVKYNPLFEPDSDVVTVMMTETRTTEERMTEMQEHI 228
++++KP + +E A L + + P ++++VM+T+ T+E+RM E+++ +
Sbjct: 44 EQISKPPKGGIVIKENPAMDEHNSLSERSNEEVPQPNIMSVMVTDVDTSEDRMAELEKKV 103
Query: 229 NNLMKAIEEKDSHIAQLKCQIENQHIAESSQTQVIKNHDKGKTTVQDDQPHCSASVASLS 288
N LMKA+EE+D IA LK IE++ AESS T IKN +KGK +Q+ QP S S+ASLS
Sbjct: 104 NMLMKAVEERDFEIALLKNHIESRDAAESSHTHTIKNANKGKAIMQESQPQNSTSIASLS 163
Query: 289 IQQLQDMITNCIRAQYGGPTQDSLLYSKPYTKRIDNLRMPIGYQPPKFQQFDGRGNPKQH 348
+QQLQ+MI N I+ QYGGP Q LYSKPYTKRIDN+RMP GYQPPKFQQFDG+GNPKQH
Sbjct: 164 VQQLQEMIANSIKTQYGGPAQTFSLYSKPYTKRIDNMRMPHGYQPPKFQQFDGKGNPKQH 223
Query: 349 IAHFVETCENAGTRGDLLVKQLVRTLKGNAFDWYTDLEPESIDSWEELEREFLNRFYSTR 408
+AHF+ETCE AGTRGDLLVKQ VRTLKGNAFDWYTDLEPESIDSWE+LER+FLNRFYSTR
Sbjct: 224 VAHFIETCETAGTRGDLLVKQFVRTLKGNAFDWYTDLEPESIDSWEQLERDFLNRFYSTR 283
Query: 409 RTV 412
R V
Sbjct: 284 RIV 286
BLAST of Lag0006238 vs. ExPASy TrEMBL
Match:
A0A5D3D4X3 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold119G001130 PE=4 SV=1)
HSP 1 Score: 299.3 bits (765), Expect = 3.2e-77
Identity = 146/243 (60.08%), Postives = 185/243 (76.13%), Query Frame = 0
Query: 169 KKLNKPVQEDQQAREQRAYTNDKFLVKYNPLFEPDSDVVTVMMTETRTTEERMTEMQEHI 228
++++KP ++ +E A L + + P ++++VM+T+ +E+RM E+++ +
Sbjct: 12 EQISKPPKDGVVIKENLAIDKHNSLSERSNEEAPQQNIMSVMVTDVDESEDRMAELEKKV 71
Query: 229 NNLMKAIEEKDSHIAQLKCQIENQHIAESSQTQVIKNHDKGKTTVQDDQPHCSASVASLS 288
N LMK +EE+D IA LK IE++ AESS +KN DKGK +Q+ QP S S+ASLS
Sbjct: 72 NMLMKVVEERDYEIAFLKNHIESRDAAESSHKHTVKNTDKGKAVMQESQPQNSTSIASLS 131
Query: 289 IQQLQDMITNCIRAQYGGPTQDSLLYSKPYTKRIDNLRMPIGYQPPKFQQFDGRGNPKQH 348
+QQLQ+MI + I+ QYGGP Q LYSKPYTKRIDNLRMP GYQPPKFQQFDG+GNPKQH
Sbjct: 132 VQQLQEMIASSIKTQYGGPAQTFSLYSKPYTKRIDNLRMPNGYQPPKFQQFDGKGNPKQH 191
Query: 349 IAHFVETCENAGTRGDLLVKQLVRTLKGNAFDWYTDLEPESIDSWEELEREFLNRFYSTR 408
+AHF+ETCE AGTRGDLLVKQ VRTLKGNAFDWY DLEPESID+WE+LER+FLNRFYSTR
Sbjct: 192 VAHFIETCETAGTRGDLLVKQFVRTLKGNAFDWYIDLEPESIDNWEQLERDFLNRFYSTR 251
Query: 409 RTV 412
R V
Sbjct: 252 RIV 254
BLAST of Lag0006238 vs. ExPASy TrEMBL
Match:
A0A5A7UUI7 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold518G00790 PE=4 SV=1)
HSP 1 Score: 297.7 bits (761), Expect = 9.3e-77
Identity = 147/243 (60.49%), Postives = 183/243 (75.31%), Query Frame = 0
Query: 169 KKLNKPVQEDQQAREQRAYTNDKFLVKYNPLFEPDSDVVTVMMTETRTTEERMTEMQEHI 228
++++KP + +E A L + + P ++++VM+T T+E RM E+++ +
Sbjct: 44 EQISKPPKGGIVIKENTAVDEHNSLSECSNEEVPQPNIMSVMVTNVDTSENRMAELEKKV 103
Query: 229 NNLMKAIEEKDSHIAQLKCQIENQHIAESSQTQVIKNHDKGKTTVQDDQPHCSASVASLS 288
N LMK +EE+D IA LK IE++ AESS +KN DKGK +Q+ QP S S+ASLS
Sbjct: 104 NMLMKVVEERDYEIAFLKNHIESRDAAESSHKHTVKNTDKGKAVMQESQPQNSTSIASLS 163
Query: 289 IQQLQDMITNCIRAQYGGPTQDSLLYSKPYTKRIDNLRMPIGYQPPKFQQFDGRGNPKQH 348
+QQLQ+MI + I+ QYGGP Q LYSKPYTKRIDNLRMP GYQPPKFQQFDG+GNPKQH
Sbjct: 164 VQQLQEMIASSIKTQYGGPAQTFSLYSKPYTKRIDNLRMPNGYQPPKFQQFDGKGNPKQH 223
Query: 349 IAHFVETCENAGTRGDLLVKQLVRTLKGNAFDWYTDLEPESIDSWEELEREFLNRFYSTR 408
+AHF+ETCE AGTRGDLLVKQ VRTLKGNAFDWY DLEPESID+WE+LER+FLNRFYSTR
Sbjct: 224 VAHFIETCETAGTRGDLLVKQFVRTLKGNAFDWYIDLEPESIDNWEQLERDFLNRFYSTR 283
Query: 409 RTV 412
R V
Sbjct: 284 RIV 286
BLAST of Lag0006238 vs. ExPASy TrEMBL
Match:
A0A5D3BRH6 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold18G00640 PE=4 SV=1)
HSP 1 Score: 297.4 bits (760), Expect = 1.2e-76
Identity = 145/243 (59.67%), Postives = 187/243 (76.95%), Query Frame = 0
Query: 169 KKLNKPVQEDQQAREQRAYTNDKFLVKYNPLFEPDSDVVTVMMTETRTTEERMTEMQEHI 228
++++KP + +E A L + + P +++++M+T+ T+E+RMT++++ +
Sbjct: 44 EQISKPPKGGIVIKENPAIDEHNSLSERSNEEVPQPNIMSIMVTDVDTSEDRMTDLEKKV 103
Query: 229 NNLMKAIEEKDSHIAQLKCQIENQHIAESSQTQVIKNHDKGKTTVQDDQPHCSASVASLS 288
N LMKA+EE+D IA LK IE+ AESS + IKN +KGK +Q+ QP S S+ASLS
Sbjct: 104 NMLMKAVEERDFEIALLKNHIESHDAAESSHSHTIKNVNKGKAIMQESQPQNSTSIASLS 163
Query: 289 IQQLQDMITNCIRAQYGGPTQDSLLYSKPYTKRIDNLRMPIGYQPPKFQQFDGRGNPKQH 348
+QQLQ+MI N I+ QYGGP + LYSKPYTKRIDN+RMP GYQPPKFQQFDG+GNPKQH
Sbjct: 164 VQQLQEMIANSIKTQYGGPAETFSLYSKPYTKRIDNMRMPHGYQPPKFQQFDGKGNPKQH 223
Query: 349 IAHFVETCENAGTRGDLLVKQLVRTLKGNAFDWYTDLEPESIDSWEELEREFLNRFYSTR 408
+A+F+ETCE GTRGDLLVKQ VRTLKGNAFDWYTDLEPESIDSW++LER+FLNRFYSTR
Sbjct: 224 VAYFIETCETVGTRGDLLVKQFVRTLKGNAFDWYTDLEPESIDSWKQLERDFLNRFYSTR 283
Query: 409 RTV 412
R V
Sbjct: 284 RIV 286
BLAST of Lag0006238 vs. ExPASy TrEMBL
Match:
A0A5A7UZD5 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold22G004860 PE=4 SV=1)
HSP 1 Score: 297.4 bits (760), Expect = 1.2e-76
Identity = 145/243 (59.67%), Postives = 187/243 (76.95%), Query Frame = 0
Query: 169 KKLNKPVQEDQQAREQRAYTNDKFLVKYNPLFEPDSDVVTVMMTETRTTEERMTEMQEHI 228
++++KP + +E A L + + P +++++M+T+ T+E+RMT++++ +
Sbjct: 44 EQISKPPKGGIVIKENPAIDEHNSLSERSNEEVPQPNIMSIMVTDVDTSEDRMTDLEKKV 103
Query: 229 NNLMKAIEEKDSHIAQLKCQIENQHIAESSQTQVIKNHDKGKTTVQDDQPHCSASVASLS 288
N LMKA+EE+D IA LK IE+ AESS + IKN +KGK +Q+ QP S S+ASLS
Sbjct: 104 NMLMKAVEERDFEIALLKNHIESHDAAESSHSHTIKNVNKGKAIMQESQPQNSTSIASLS 163
Query: 289 IQQLQDMITNCIRAQYGGPTQDSLLYSKPYTKRIDNLRMPIGYQPPKFQQFDGRGNPKQH 348
+QQLQ+MI N I+ QYGGP + LYSKPYTKRIDN+RMP GYQPPKFQQFDG+GNPKQH
Sbjct: 164 VQQLQEMIANSIKTQYGGPAETFSLYSKPYTKRIDNMRMPHGYQPPKFQQFDGKGNPKQH 223
Query: 349 IAHFVETCENAGTRGDLLVKQLVRTLKGNAFDWYTDLEPESIDSWEELEREFLNRFYSTR 408
+A+F+ETCE GTRGDLLVKQ VRTLKGNAFDWYTDLEPESIDSW++LER+FLNRFYSTR
Sbjct: 224 VAYFIETCETVGTRGDLLVKQFVRTLKGNAFDWYTDLEPESIDSWKQLERDFLNRFYSTR 283
Query: 409 RTV 412
R V
Sbjct: 284 RIV 286
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5A7TZU9 | 3.4e-79 | 62.14 | Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold498G00940... | [more] |
A0A5D3D4X3 | 3.2e-77 | 60.08 | Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567... | [more] |
A0A5A7UUI7 | 9.3e-77 | 60.49 | Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2... | [more] |
A0A5D3BRH6 | 1.2e-76 | 59.67 | Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567... | [more] |
A0A5A7UZD5 | 1.2e-76 | 59.67 | Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2... | [more] |
Match Name | E-value | Identity | Description | |