Lag0005436 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTATTTGCCTGTCACATGTATGGTGCAACTGTTTTTCTTCACCACACTTGTCACCAATGAGATTAATGAGCTAGACCGACAGAGAATTTCTGTTCAAGAAAGGAAGCAGGCGATGAAGAAACTTGAGAAACAAGAACTTAGGGCGCAGTGAGTATAATCTCTTTTTGTAGATGCCTTGTCATCTGTAATTGTCACTGTTAATTAGTAGCAATTAACTAATTCCTGTGAAATTTGAATCTATTTCATTATTGTGCAGTATCAAGTATTATCTGACAAGCACAATTTTTATGTATTTTGTTGGAAGTACAGAAGGTCTACCTTTTTATTTGTTTAAATTAAATTTAGTCCATATGCAGCTTTTTTGCTCCAATCGATTGCTTATGGTAGTTAGGTTACACTCCTATGAAGATGGATGATTATTTTTTAAAGCAATGAGCGTTTATAGTCTAATTTTGATGCATGATATGGATAATGTCAACCTAATTGTTTAACCTTTTGATCTTAAAGGCATGGAATCCCACCCCAACCAACAAGAAAGTAATATCCTTCTGTTATAGCTGTTACCTAGTTCTTTTTAATTTGTTCTTCTGAAGTAATTTAGTTCTGTCTGTGTCTGCATTTGAATTTCTGTCCTGTGTTGAAAACGGGAATTTTGTCTACAAGGTATTTGAAATTTGCTAAAAGATCAGAGTAGAAATAAAGGTAAGGTAACAACGATTAGTAAACAACACTACCAAGTGACAAAAGTTGTCGAAGTCGTTATTTATAGTTCCTCTATAGCAACTTGCAATTACCAATTACTTGTGTATACGGAGGTGGACTAGACTAATATCAGTAACTGTAGTCCATTCCAGAACTGAATTTACAATAGTTGCAATTACCATATCCTTTTTTTTAACTATGAACTTATAAACTGAGTGGCTGTCGAAGATCCTTGACAACCCAAGTCTCAGTATCTTTAATTGACATTAACCTGATAGTTCTCTATCTTCCAACAACCCAAGTCTCAGTATCTTTAATTGACATTAACCTGATAGTTCTCTATCTTCCAATTTGATGCATATTTTCTTGTTGTTTGCAGGAGGAAGCTTTCGATGTATGCTTCGGTCACTGATATAATACCAAACATGGACGATCTGGCTAAAATTTCTGGCCGTATCCTTTGTCTGAATTTATACTCTTTTCTGTTATATTTTCTCTTTCCTTTGCTATTGCTTTACCTTAACTTTAATCAACTACAGATATTGTGGATAGAAATAAACGGGTGGTACAGAAGTTTGAATTGGACCCGACTAAGATGTCTGCATTTGATATATGCAACGACATTTGGAATACGATTAATTCCCCATAG ATGTATTTGCCTGTCACATGTATGGTGCAACTGTTTTTCTTCACCACACTTGTCACCAATGAGATTAATGAGCTAGACCGACAGAGAATTTCTGTTCAAGAAAGGAAGCAGGCGATGAAGAAACTTGAGAAACAAGAACTTAGGGCGCAGAGGAAGCTTTCGATGTATGCTTCGGTCACTGATATAATACCAAACATGGACGATCTGGCTAAAATTTCTGGCCATATTGTGGATAGAAATAAACGGGTGGTACAGAAGTTTGAATTGGACCCGACTAAGATGTCTGCATTTGATATATGCAACGACATTTGGAATACGATTAATTCCCCATAG ATGTATTTGCCTGTCACATGTATGGTGCAACTGTTTTTCTTCACCACACTTGTCACCAATGAGATTAATGAGCTAGACCGACAGAGAATTTCTGTTCAAGAAAGGAAGCAGGCGATGAAGAAACTTGAGAAACAAGAACTTAGGGCGCAGAGGAAGCTTTCGATGTATGCTTCGGTCACTGATATAATACCAAACATGGACGATCTGGCTAAAATTTCTGGCCATATTGTGGATAGAAATAAACGGGTGGTACAGAAGTTTGAATTGGACCCGACTAAGATGTCTGCATTTGATATATGCAACGACATTTGGAATACGATTAATTCCCCATAG MYLPVTCMVQLFFFTTLVTNEINELDRQRISVQERKQAMKKLEKQELRAQRKLSMYASVTDIIPNMDDLAKISGHIVDRNKRVVQKFELDPTKMSAFDICNDIWNTINSP Homology
BLAST of Lag0005436 vs. NCBI nr
Match: XP_023518318.1 (uncharacterized protein LOC111781837 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 172.2 bits (435), Expect = 2.5e-39 Identity = 87/94 (92.55%), Postives = 91/94 (96.81%), Query Frame = 0
BLAST of Lag0005436 vs. NCBI nr
Match: XP_022966574.1 (uncharacterized protein LOC111466216 [Cucurbita maxima]) HSP 1 Score: 169.9 bits (429), Expect = 1.3e-38 Identity = 86/94 (91.49%), Postives = 90/94 (95.74%), Query Frame = 0
BLAST of Lag0005436 vs. NCBI nr
Match: XP_022931907.1 (uncharacterized protein LOC111438184 [Cucurbita moschata] >XP_022931908.1 uncharacterized protein LOC111438184 [Cucurbita moschata]) HSP 1 Score: 169.5 bits (428), Expect = 1.6e-38 Identity = 85/94 (90.43%), Postives = 91/94 (96.81%), Query Frame = 0
BLAST of Lag0005436 vs. NCBI nr
Match: KAG6603567.1 (Kinetochore protein SPC24-like protein, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 167.5 bits (423), Expect = 6.3e-38 Identity = 83/103 (80.58%), Postives = 93/103 (90.29%), Query Frame = 0
BLAST of Lag0005436 vs. NCBI nr
Match: KAG7027420.1 (hypothetical protein SDJN02_11433, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 166.8 bits (421), Expect = 1.1e-37 Identity = 84/93 (90.32%), Postives = 88/93 (94.62%), Query Frame = 0
BLAST of Lag0005436 vs. ExPASy Swiss-Prot
Match: Q67XT3 (Kinetochore protein SPC24 homolog OS=Arabidopsis thaliana OX=3702 GN=SPC24 PE=1 SV=1) HSP 1 Score: 102.8 bits (255), Expect = 2.5e-21 Identity = 46/92 (50.00%), Postives = 73/92 (79.35%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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