Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACTTCCGAAAAAACTTTTTCAAAGATCGCTGCTTCAAGCAACTCCTATGTGGGGCCAATTACTTGCAGTCGCTCCAAGGAAACCCAACACGAAGACAGCCAAACTCCTGTCATTGCAAACAAGATGCTGAGACGCATGACAGAATCTGCTCAACTTGAAATCGCCGCTGCAAAAAATCTGATGCTTGCCAAATTCGTCTCTTCTTCTCAGCAACCAAACGACACATCCAGTCCTGATGTGATGTCTGTTATAATGACTGATGCTGGAACTAGTGAAGAACGAATGGCTGAGGTTGAGAAGAAAATCAGCATGCTACTGAAGATGGTCGAAGAGAAAGACCAAGAAATCGTCTCTCTCAGGAACCAGATGGAAAGTCGGGATGTTGCTGAATCGAGTCAAACCCCTGCTATCAAAGACAAGGGAAAGATCATTGCACAAGATCAGTCACAACATTCCACTTCTATTGCTTCACTGTCCGTTCAGCAGCTTCAGGATATGATCATGAATTCCATCAGAGCTCAATATGGTGGACCGACTCAAAACTCTCTCTTGTATTCCAAGCCGTATACCAAGAGAATCGACAATCTGAGAATGCCTCATGGATACCAGCCACCAAAGTTTCAACAATTCGACGGGAAGGGCAATCCCAAACAGCACGTTGCTCATTTCGTCGAGACATGTGAAAACGATGGAACTAGAGGAGACCAACTAGTCAGGCAGTTCGTACGAACACTGAAGGGGAATGCTTTCGATTGGTATACTGACCTTGAGCCTGAGACTATCGATAGTTGGGAACAACTTGAGAAGGAGTTCCTCAACCGCTTCTACAGCTGTCGGGCTCTTAGAGTGAGTAAAAATATAGTATAAAATACTCTAGAATTCCTGTGCAAGTATACACAGTCTGCAACAAGTAATATTATCAATCCAAGGTCTGAATGAGCTTCCACTTTATCTATTTTGCGTAACTTCCTAATGGTTTCGAAGATAATAAAAATGTTGGGTTTTATAAGAATTATGCTGAAGCAAAATAAATGACAGAACAACAAGTAAAAAAATAGATAGACAGATCAAAGACAGGCGCTGGTTAGGTTTTAGTGATTGTTCTAAGATATGCTCTAGCAATATTATTGATCATGCATTTCTCGCAGTATTATTAGCGGATTCCTCCCGGAACTCCGGATATTTTGGAATATGTTTCAAACCCAATGAAGTACGACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAAAAAAAAGTTTGAATATGTATATACCTTCCAAATGATGGGCAAAGGTTGATGTTGTGTCCTTTCAAATCCTACAAAAAAAATGACCGATAATTAGCAAAAAAAAAAAGCCAAAAAAAAAAGATGTCTGTAACCAAGTTTTTTTAAAAAAAAAAAGAGAGAAAAAAAAAGAAAGAAAAGAAATCTCTTGTAGGCTAAAAAAATAAAAGAAAAATGGGGCATGTGACAAAAGAAAAGTAAAAAAAATTCTAAACGAAAAAAAAAAAAAAGTCAAGCAATGCGGCCTTTAACCTACACATGCGACAACTTAAAAAAAAAAAAAAAAAAAGACATATACAAAACGACTTAATGCAACATTTAAACCTCAAAAATATATGCATAAAGAAGGTAAGGTGAGTAAACACATATGTTGTTTATTTTTAAGGTTCAATTACTGAAGGATATTAAAAAAAAAAAAATCTTGAAATTGCGGCACTCAACAAATAGGGGCTGATAAACTTTGAAGACCTGGACTCTTTTGTTCATCAAAAGAAAAGGATTTGCAAAACCTAGGTGTTTCATTGTTTATTAAAACAAAATAAAAATAAAATAAATAAAAAGTTGTGGTTGGGATAAAATAATAATAATAATAATAATAAAACCCTAATGTATTGGGCAGTGTAAACAAAAAATAAATAATAATAAATAAATAAAAGAAAATAAAAAAAAAGAAGCCTAATGTAAGCGACATTAAAAAAAATCAAAAGTTGCAGCGCACGCATCACAGCAAAGTTTGGATTATGCACAGTGACACACATATGCATTTATATATATGTGAAGAAACATTTTGAATAAAAGCACCTCCTATTGTGCAAAATCCATGATGTATAGCCGTAGTATTATGTGTAAAGAATGCAAGACTTGCGGCAGTAGCTATGCGTGAAGGTAATAAAAGATTTTTTTTTAAGGATATTTTTACTTACCGTCGAAGCAACGAAAAGGCACAAAGGGAGGTTATTGCTCGAATTCAAGGCCTACACAAAGAAGAAAATACATGAGCATTTATAGTCAAATGAAAGAAAGAAAAGAGAAGTTAAAGAGAAGAGAATTTTTTCTTACCTAACTTCTTGCTTGAATGGCTTTGTGTCTTGACCTATACAACTTATTCAATTTATAAGGGAGAAATTAGGTCAAACACATAAGGAAAAGTTGCTTTTTGGCCAAGGAAATTTTTGCCTAATCAAATATGGCAATGAATTTCCTACAATTGCTATTTAGGAAAAAAATTGCCTCCAAATTACATGAATCAAGAGAGAATTTTTGGCCTAATAAAATTGACAAGCCAAGAGACTTCCAATTCTTGTTCAAAGTACCTATCTACCTCCAAATTCATGTCCAAGGTAAAGAAAAAAAATTGTGGCAATTTTGGCGAAAATTAATTTTCCAATTTAAAAAAAAAAGTATTGGAAATCAAAATTCAAAATTTGCCTAAAATCAATGTTGGTAGCGAAAACGAAATTATTTGGAATTATAAATTAATATTCTAATTAATTTCGCCTATCGACACAAATTAAAGTTATGACTAAACGTCATATATTTTTCTCACAAACCATGCTTTTCAAAATCCATGCACGCATATAGGTGCATAAATTTCGAAAAGGGGACATTTGTTGAGTGAGAAATTTCGGCCAATTACAAATGGCCATGTCATTAATTTAAATTAATGATAAAATAATTTTGGGACCAATTACAAATTTACACGTGTCCCTAAATTAAATTAATAGACATTAAAATTCGGCAAATAAAACAATGCCACTTGTCTATCATTGATCCATCAGATGACGTAAGTCGAGTCCAACCAAATTATGCCACGTGGCAATTGGATGCGAGATTGATGTGACCCGAGATCATTGAAGAAATTGGGCTAAATTAAAATGATCCAATTTTATTAAAAATGAGTTGGATTAAAGCCCAAATAGAGTCAAAGTCCAAAGGCTGGACCCAAGCCCAAACCCATATGAGGTCCACCCAACTCTATAAATAGAGGAGGTCACCATTCATTTTGGGCATTCAGACAGAGTCAGAGAAGCCAGAGCCCAGAGCATTCTCCTAAGGTCCAGAGTCTTCAGAAGTCAGAGAGTTTAGAGAATTCAGAAGATCCAAGATTCAGAATTCGACCATCTCAAAACTCAGAAGATCCAACGACTGAAAGACTCCAAAGAATCAACCGTTTCTTCATCAAGATACAAGTTGAAGATTCAACATTCCTCCGTCTGAGATCAAGCTTGTCGGCCCTCAGATCAGACTCCATATTTTGA
mRNA sequence
ATGACTTCCGAAAAAACTTTTTCAAAGATCGCTGCTTCAAGCAACTCCTATGTGGGGCCAATTACTTGCAGTCGCTCCAAGGAAACCCAACACGAAGACAGCCAAACTCCTGTCATTGCAAACAAGATGCTGAGACGCATGACAGAATCTGCTCAACTTGAAATCGCCGCTGCAAAAAATCTGATGCTTGCCAAATTCGTCTCTTCTTCTCAGCAACCAAACGACACATCCAGTCCTGATGTGATGTCTGTTATAATGACTGATGCTGGAACTAGTGAAGAACGAATGGCTGAGGTTGAGAAGAAAATCAGCATGCTACTGAAGATGGTCGAAGAGAAAGACCAAGAAATCGTCTCTCTCAGGAACCAGATGGAAAGTCGGGATGTTGCTGAATCGAGTCAAACCCCTGCTATCAAAGACAAGGGAAAGATCATTGCACAAGATCAGTCACAACATTCCACTTCTATTGCTTCACTGTCCGTTCAGCAGCTTCAGGATATGATCATGAATTCCATCAGAGCTCAATATGGTGGACCGACTCAAAACTCTCTCTTGTATTCCAAGCCGTATACCAAGAGAATCGACAATCTGAGAATGCCTCATGGATACCAGCCACCAAAGTTTCAACAATTCGACGGGAAGGGCAATCCCAAACAGCACGTTGCTCATTTCGTCGAGACATGTGAAAACGATGGAACTAGAGGAGACCAACTAGTCAGGCAGTTCGTACGAACACTGAAGGGGAATGCTTTCGATTGGTATACTGACCTTGAGCCTGAGACTATCGATAGTTGGGAACAACTTGAGAAGGAGTTCCTCAACCGCTTCTACAGCTGTCGGGCTCTTAGAAGTCAGAGAAGCCAGAGCCCAGAGCATTCTCCTAAGGTCCAGAGTCTTCAGAAGTCAGAGAGTTTAGAGAATTCAGAAGATCCAAGATTCAGAATTCGACCATCTCAAAACTCAGAAGATCCAACGACTGAAAGACTCCAAAGAATCAACCGTTTCTTCATCAAGATACAAGTTGAAGATTCAACATTCCTCCGTCTGAGATCAAGCTTGTCGGCCCTCAGATCAGACTCCATATTTTGA
Coding sequence (CDS)
ATGACTTCCGAAAAAACTTTTTCAAAGATCGCTGCTTCAAGCAACTCCTATGTGGGGCCAATTACTTGCAGTCGCTCCAAGGAAACCCAACACGAAGACAGCCAAACTCCTGTCATTGCAAACAAGATGCTGAGACGCATGACAGAATCTGCTCAACTTGAAATCGCCGCTGCAAAAAATCTGATGCTTGCCAAATTCGTCTCTTCTTCTCAGCAACCAAACGACACATCCAGTCCTGATGTGATGTCTGTTATAATGACTGATGCTGGAACTAGTGAAGAACGAATGGCTGAGGTTGAGAAGAAAATCAGCATGCTACTGAAGATGGTCGAAGAGAAAGACCAAGAAATCGTCTCTCTCAGGAACCAGATGGAAAGTCGGGATGTTGCTGAATCGAGTCAAACCCCTGCTATCAAAGACAAGGGAAAGATCATTGCACAAGATCAGTCACAACATTCCACTTCTATTGCTTCACTGTCCGTTCAGCAGCTTCAGGATATGATCATGAATTCCATCAGAGCTCAATATGGTGGACCGACTCAAAACTCTCTCTTGTATTCCAAGCCGTATACCAAGAGAATCGACAATCTGAGAATGCCTCATGGATACCAGCCACCAAAGTTTCAACAATTCGACGGGAAGGGCAATCCCAAACAGCACGTTGCTCATTTCGTCGAGACATGTGAAAACGATGGAACTAGAGGAGACCAACTAGTCAGGCAGTTCGTACGAACACTGAAGGGGAATGCTTTCGATTGGTATACTGACCTTGAGCCTGAGACTATCGATAGTTGGGAACAACTTGAGAAGGAGTTCCTCAACCGCTTCTACAGCTGTCGGGCTCTTAGAAGTCAGAGAAGCCAGAGCCCAGAGCATTCTCCTAAGGTCCAGAGTCTTCAGAAGTCAGAGAGTTTAGAGAATTCAGAAGATCCAAGATTCAGAATTCGACCATCTCAAAACTCAGAAGATCCAACGACTGAAAGACTCCAAAGAATCAACCGTTTCTTCATCAAGATACAAGTTGAAGATTCAACATTCCTCCGTCTGAGATCAAGCTTGTCGGCCCTCAGATCAGACTCCATATTTTGA
Protein sequence
MTSEKTFSKIAASSNSYVGPITCSRSKETQHEDSQTPVIANKMLRRMTESAQLEIAAAKNLMLAKFVSSSQQPNDTSSPDVMSVIMTDAGTSEERMAEVEKKISMLLKMVEEKDQEIVSLRNQMESRDVAESSQTPAIKDKGKIIAQDQSQHSTSIASLSVQQLQDMIMNSIRAQYGGPTQNSLLYSKPYTKRIDNLRMPHGYQPPKFQQFDGKGNPKQHVAHFVETCENDGTRGDQLVRQFVRTLKGNAFDWYTDLEPETIDSWEQLEKEFLNRFYSCRALRSQRSQSPEHSPKVQSLQKSESLENSEDPRFRIRPSQNSEDPTTERLQRINRFFIKIQVEDSTFLRLRSSLSALRSDSIF
Homology
BLAST of Lag0005418 vs. NCBI nr
Match:
XP_031742199.1 (uncharacterized protein LOC105435721 [Cucumis sativus])
HSP 1 Score: 337.0 bits (863), Expect = 2.0e-88
Identity = 180/284 (63.38%), Postives = 221/284 (77.82%), Query Frame = 0
Query: 1 MTSEKTFSKIAASSNSYVGPITCSRSKETQHEDSQTPVIANKMLRRMTESAQLEIAAAKN 60
M S+K SK +A+S++Y GPIT SRSK Q IA +L+++ ES + I +N
Sbjct: 1 MASKKAASKSSAASDTYTGPITRSRSKGIIQGQDQGSAIAQSILKQLMESPKAGIVIKEN 60
Query: 61 LMLAKFVSSSQQPNDTSSPDVMSVIMTDAGTSEERMAEVEKKISMLLKMVEEKDQEIVSL 120
+ + S+S + + PDVMSV+M D E MAE+E+KI++L+K+V+E+D EI +L
Sbjct: 61 PLYNDYDSASSRSLKEAHPDVMSVMMADVAV-ETAMAEMERKINLLMKVVDERDHEIAAL 120
Query: 121 RNQMESRDVAESSQTPAIK--DKGKIIAQDQ--SQHSTSIASLSVQQLQDMIMNSIRAQY 180
+ QM++R+ AESSQTP +K DKGK + Q+ Q STS+ASLSVQQLQDMI NSIRAQY
Sbjct: 121 KEQMQTRETAESSQTPVVKVDDKGKNVVQENQPQQQSTSVASLSVQQLQDMITNSIRAQY 180
Query: 181 GGPTQNSLLYSKPYTKRIDNLRMPHGYQPPKFQQFDGKGNPKQHVAHFVETCENDGTRGD 240
GGP+Q S +YSKPYTKRIDNLRMP GYQPPKFQQFDGKGNPKQHVAHFVETCEN G+RGD
Sbjct: 181 GGPSQTSFMYSKPYTKRIDNLRMPLGYQPPKFQQFDGKGNPKQHVAHFVETCENAGSRGD 240
Query: 241 QLVRQFVRTLKGNAFDWYTDLEPETIDSWEQLEKEFLNRFYSCR 281
QLVRQFVR+LKGNAF+WYTDLEPE+I+SWEQLEKEFLNRFYS R
Sbjct: 241 QLVRQFVRSLKGNAFEWYTDLEPESIESWEQLEKEFLNRFYSTR 283
BLAST of Lag0005418 vs. NCBI nr
Match:
XP_031735972.1 (uncharacterized protein LOC116401693 [Cucumis sativus])
HSP 1 Score: 337.0 bits (863), Expect = 2.0e-88
Identity = 180/284 (63.38%), Postives = 221/284 (77.82%), Query Frame = 0
Query: 1 MTSEKTFSKIAASSNSYVGPITCSRSKETQHEDSQTPVIANKMLRRMTESAQLEIAAAKN 60
M S+K SK +A+S++Y GPIT SRSK Q IA +L+++ ES + I +N
Sbjct: 1 MASKKAASKSSAASDTYTGPITRSRSKGIIQGQDQGSAIAQSILKQLMESPKAGIVIKEN 60
Query: 61 LMLAKFVSSSQQPNDTSSPDVMSVIMTDAGTSEERMAEVEKKISMLLKMVEEKDQEIVSL 120
+ + S+S + + PDVMSV+M D E MAE+E+KI++L+K+V+E+D EI +L
Sbjct: 61 PLYNDYDSASSRSLKEAHPDVMSVMMADVAV-ETAMAEMERKINLLMKVVDERDHEIAAL 120
Query: 121 RNQMESRDVAESSQTPAIK--DKGKIIAQDQ--SQHSTSIASLSVQQLQDMIMNSIRAQY 180
+ QM++R+ AESSQTP +K DKGK + Q+ Q STS+ASLSVQQLQDMI NSIRAQY
Sbjct: 121 KEQMQTRETAESSQTPVVKVDDKGKNVVQENQPQQQSTSVASLSVQQLQDMITNSIRAQY 180
Query: 181 GGPTQNSLLYSKPYTKRIDNLRMPHGYQPPKFQQFDGKGNPKQHVAHFVETCENDGTRGD 240
GGP+Q S +YSKPYTKRIDNLRMP GYQPPKFQQFDGKGNPKQHVAHFVETCEN G+RGD
Sbjct: 181 GGPSQTSFMYSKPYTKRIDNLRMPLGYQPPKFQQFDGKGNPKQHVAHFVETCENAGSRGD 240
Query: 241 QLVRQFVRTLKGNAFDWYTDLEPETIDSWEQLEKEFLNRFYSCR 281
QLVRQFVR+LKGNAF+WYTDLEPE+I+SWEQLEKEFLNRFYS R
Sbjct: 241 QLVRQFVRSLKGNAFEWYTDLEPESIESWEQLEKEFLNRFYSTR 283
BLAST of Lag0005418 vs. NCBI nr
Match:
XP_031739134.1 (uncharacterized protein LOC116402863 [Cucumis sativus])
HSP 1 Score: 335.1 bits (858), Expect = 7.5e-88
Identity = 179/284 (63.03%), Postives = 221/284 (77.82%), Query Frame = 0
Query: 1 MTSEKTFSKIAASSNSYVGPITCSRSKETQHEDSQTPVIANKMLRRMTESAQLEIAAAKN 60
M S+K SK +A+S++Y GPIT SRSK Q IA +L+++ ES + I +N
Sbjct: 1 MASKKAASKSSAASDTYTGPITRSRSKGIIQGQDQGSAIAQSILKQLMESPKAGIVIKEN 60
Query: 61 LMLAKFVSSSQQPNDTSSPDVMSVIMTDAGTSEERMAEVEKKISMLLKMVEEKDQEIVSL 120
+ + S+S + + PDVMSV+M D E MAE+E+KI++L+K+V+E+D EI +L
Sbjct: 61 PLYNDYDSASSRSLKEAHPDVMSVMMADVAV-ETAMAEMERKINLLMKVVDERDHEIAAL 120
Query: 121 RNQMESRDVAESSQTPAIK--DKGKIIAQDQ--SQHSTSIASLSVQQLQDMIMNSIRAQY 180
+ QM++R+ AESSQTP +K DKGK + Q+ Q STS+ASLSVQQLQDMI +SIRAQY
Sbjct: 121 KEQMQTRETAESSQTPVVKVDDKGKNVVQENQPQQQSTSVASLSVQQLQDMITSSIRAQY 180
Query: 181 GGPTQNSLLYSKPYTKRIDNLRMPHGYQPPKFQQFDGKGNPKQHVAHFVETCENDGTRGD 240
GGP+Q S +YSKPYTKRIDNLRMP GYQPPKFQQFDGKGNPKQHVAHFVETCEN G+RGD
Sbjct: 181 GGPSQTSFMYSKPYTKRIDNLRMPLGYQPPKFQQFDGKGNPKQHVAHFVETCENAGSRGD 240
Query: 241 QLVRQFVRTLKGNAFDWYTDLEPETIDSWEQLEKEFLNRFYSCR 281
QLVRQFVR+LKGNAF+WYTDLEPE+I+SWEQLEKEFLNRFYS R
Sbjct: 241 QLVRQFVRSLKGNAFEWYTDLEPESIESWEQLEKEFLNRFYSTR 283
BLAST of Lag0005418 vs. NCBI nr
Match:
XP_031742032.1 (uncharacterized protein LOC116404025 [Cucumis sativus])
HSP 1 Score: 335.1 bits (858), Expect = 7.5e-88
Identity = 179/284 (63.03%), Postives = 221/284 (77.82%), Query Frame = 0
Query: 1 MTSEKTFSKIAASSNSYVGPITCSRSKETQHEDSQTPVIANKMLRRMTESAQLEIAAAKN 60
M S+K SK +A+S++Y GPIT SRSK Q IA +L+++ ES + I +N
Sbjct: 1 MASKKAASKSSAASDTYTGPITRSRSKGIIQGQDQGSAIAQSILKQLMESPKAGIVIKEN 60
Query: 61 LMLAKFVSSSQQPNDTSSPDVMSVIMTDAGTSEERMAEVEKKISMLLKMVEEKDQEIVSL 120
+ + S+S + + PDVMSV+M D E MAE+E+KI++L+K+V+E+D EI +L
Sbjct: 61 PLYNDYDSASSRSLKEAHPDVMSVMMADVAV-ETAMAEMERKINLLMKVVDERDHEIAAL 120
Query: 121 RNQMESRDVAESSQTPAIK--DKGKIIAQDQ--SQHSTSIASLSVQQLQDMIMNSIRAQY 180
+ QM++R+ AESSQTP +K DKGK + Q+ Q STS+ASLSVQQLQDMI +SIRAQY
Sbjct: 121 KEQMQTRETAESSQTPVVKVDDKGKNVVQENQPQQQSTSVASLSVQQLQDMITSSIRAQY 180
Query: 181 GGPTQNSLLYSKPYTKRIDNLRMPHGYQPPKFQQFDGKGNPKQHVAHFVETCENDGTRGD 240
GGP+Q S +YSKPYTKRIDNLRMP GYQPPKFQQFDGKGNPKQHVAHFVETCEN G+RGD
Sbjct: 181 GGPSQTSFMYSKPYTKRIDNLRMPLGYQPPKFQQFDGKGNPKQHVAHFVETCENAGSRGD 240
Query: 241 QLVRQFVRTLKGNAFDWYTDLEPETIDSWEQLEKEFLNRFYSCR 281
QLVRQFVR+LKGNAF+WYTDLEPE+I+SWEQLEKEFLNRFYS R
Sbjct: 241 QLVRQFVRSLKGNAFEWYTDLEPESIESWEQLEKEFLNRFYSTR 283
BLAST of Lag0005418 vs. NCBI nr
Match:
XP_031737053.1 (uncharacterized protein LOC116402138 [Cucumis sativus])
HSP 1 Score: 335.1 bits (858), Expect = 7.5e-88
Identity = 179/284 (63.03%), Postives = 221/284 (77.82%), Query Frame = 0
Query: 1 MTSEKTFSKIAASSNSYVGPITCSRSKETQHEDSQTPVIANKMLRRMTESAQLEIAAAKN 60
M S+K SK +A+S++Y GPIT SRSK Q IA +L+++ ES + I +N
Sbjct: 1 MASKKAASKSSAASDTYTGPITRSRSKGIIQGQDQGSAIAQSILKQLMESPKAGIVIKEN 60
Query: 61 LMLAKFVSSSQQPNDTSSPDVMSVIMTDAGTSEERMAEVEKKISMLLKMVEEKDQEIVSL 120
+ + S+S + + PDVMSV+M D E MAE+E+KI++L+K+V+E+D EI +L
Sbjct: 61 PLYNDYDSASSRSLKEAHPDVMSVMMADVAV-ETAMAEMERKINLLMKVVDERDHEIAAL 120
Query: 121 RNQMESRDVAESSQTPAIK--DKGKIIAQDQ--SQHSTSIASLSVQQLQDMIMNSIRAQY 180
+ QM++R+ AESSQTP +K DKGK + Q+ Q STS+ASLSVQQLQDMI +SIRAQY
Sbjct: 121 KEQMQTRETAESSQTPVVKVDDKGKNVVQENQPQQQSTSVASLSVQQLQDMITSSIRAQY 180
Query: 181 GGPTQNSLLYSKPYTKRIDNLRMPHGYQPPKFQQFDGKGNPKQHVAHFVETCENDGTRGD 240
GGP+Q S +YSKPYTKRIDNLRMP GYQPPKFQQFDGKGNPKQHVAHFVETCEN G+RGD
Sbjct: 181 GGPSQTSFMYSKPYTKRIDNLRMPLGYQPPKFQQFDGKGNPKQHVAHFVETCENAGSRGD 240
Query: 241 QLVRQFVRTLKGNAFDWYTDLEPETIDSWEQLEKEFLNRFYSCR 281
QLVRQFVR+LKGNAF+WYTDLEPE+I+SWEQLEKEFLNRFYS R
Sbjct: 241 QLVRQFVRSLKGNAFEWYTDLEPESIESWEQLEKEFLNRFYSTR 283
BLAST of Lag0005418 vs. ExPASy TrEMBL
Match:
A0A5D3BY54 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold863G001700 PE=4 SV=1)
HSP 1 Score: 327.8 bits (839), Expect = 5.8e-86
Identity = 177/284 (62.32%), Postives = 213/284 (75.00%), Query Frame = 0
Query: 1 MTSEKTFSKIAASSNSYVGPITCSRSKETQHEDSQTPVIANKMLRRMTESAQLEIAAAKN 60
M S+K S + +SN+Y GPIT SRSK E Q +A +L+++ ES + I +N
Sbjct: 1 MASKKAASNSSVASNAYTGPITRSRSKGITQEQDQGSNVAQSILKQLMESLKAGIVIKEN 60
Query: 61 LMLAKFVSSSQQPNDTSSPDVMSVIMTDAGTSEERMAEVEKKISMLLKMVEEKDQEIVSL 120
+ SSS + + PDVMSV+M D T E MAE+E+KI+ L+K VEE+D EI++L
Sbjct: 61 PLYDNSDSSSSKSKKETHPDVMSVMMADI-TPEAAMAEMERKINFLMKAVEERDHEIIAL 120
Query: 121 RNQMESRDVAESSQTPAIK--DKGKIIAQDQ--SQHSTSIASLSVQQLQDMIMNSIRAQY 180
R QM +R+ AESSQTP +K DKGK + Q+ Q S S+ASLSVQQLQDMI NSIRAQY
Sbjct: 121 REQMRTRETAESSQTPIVKATDKGKNVVQENQPQQQSVSVASLSVQQLQDMIANSIRAQY 180
Query: 181 GGPTQNSLLYSKPYTKRIDNLRMPHGYQPPKFQQFDGKGNPKQHVAHFVETCENDGTRGD 240
GGP Q + +YSK YTKRIDNLRMP GYQPPKFQQF+GKGNPKQH+AHF ETCEN G+RGD
Sbjct: 181 GGPPQTTFMYSKSYTKRIDNLRMPLGYQPPKFQQFNGKGNPKQHIAHFNETCENAGSRGD 240
Query: 241 QLVRQFVRTLKGNAFDWYTDLEPETIDSWEQLEKEFLNRFYSCR 281
QLVRQFV++LKGNAF+WYTDLEPE IDSWEQLEKEFLNRFYS R
Sbjct: 241 QLVRQFVQSLKGNAFEWYTDLEPEVIDSWEQLEKEFLNRFYSTR 283
BLAST of Lag0005418 vs. ExPASy TrEMBL
Match:
A0A5D3CD35 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold127G00070 PE=4 SV=1)
HSP 1 Score: 318.5 bits (815), Expect = 3.5e-83
Identity = 172/284 (60.56%), Postives = 211/284 (74.30%), Query Frame = 0
Query: 1 MTSEKTFSKIAASSNSYVGPITCSRSKETQHEDSQTPVIANKMLRRMTESAQLEIAAAKN 60
M S+KT S + +S++Y GPIT S SK E Q +A +L+++ ES ++ I +N
Sbjct: 1 MASKKTASNSSVASDAYTGPITLSHSKGITQEQDQGSNVAQSILKQLMESPKVGIVIKEN 60
Query: 61 LMLAKFVSSSQQPNDTSSPDVMSVIMTDAGTSEERMAEVEKKISMLLKMVEEKDQEIVSL 120
+ F +S + + PDVM V+M D T+E MA++EKKI+ L+K +EE D EI +L
Sbjct: 61 PLYDNFDYASSKSKKEAHPDVMFVMMADI-TAEAAMAKMEKKINFLMKAMEEGDHEITAL 120
Query: 121 RNQMESRDVAESSQTPAIK--DKGKIIAQ--DQSQHSTSIASLSVQQLQDMIMNSIRAQY 180
R QM +R+ AESSQTP +K DKGK + Q Q S SIASLSVQ+LQDMI NSIRAQY
Sbjct: 121 REQMRTRETAESSQTPVVKATDKGKNVVQKNQPQQQSVSIASLSVQRLQDMIANSIRAQY 180
Query: 181 GGPTQNSLLYSKPYTKRIDNLRMPHGYQPPKFQQFDGKGNPKQHVAHFVETCENDGTRGD 240
GGP Q + +YSKPYTKRIDNLRMP GYQPPKFQQFDGKGNPKQH+AHFVETC N G+RGD
Sbjct: 181 GGPPQTTFMYSKPYTKRIDNLRMPLGYQPPKFQQFDGKGNPKQHIAHFVETCRNAGSRGD 240
Query: 241 QLVRQFVRTLKGNAFDWYTDLEPETIDSWEQLEKEFLNRFYSCR 281
QLVRQFVR+LKGNAF+WYT+LE E ID+WEQLEKEFL+RFYS R
Sbjct: 241 QLVRQFVRSLKGNAFEWYTNLEQEVIDTWEQLEKEFLDRFYSIR 283
BLAST of Lag0005418 vs. ExPASy TrEMBL
Match:
A0A5A7TZU9 (Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold498G00940 PE=4 SV=1)
HSP 1 Score: 315.5 bits (807), Expect = 3.0e-82
Identity = 177/289 (61.25%), Postives = 218/289 (75.43%), Query Frame = 0
Query: 1 MTSEKTFSKIAASSNSYVGPITCSRSKETQHEDSQTPV-IANKMLRRMTESAQLEIAAAK 60
MTS+ SK A S+ P T SRS+E Q + P +A + ++++ + I +
Sbjct: 1 MTSQGNTSK--ALSDIGKRPNTRSRSREIQSSEDMPPFDVAKNIWEQISKPPKGGIVIKE 60
Query: 61 NLMLAKFVSSSQQPN-DTSSPDVMSVIMTDAGTSEERMAEVEKKISMLLKMVEEKDQEIV 120
N + + S S++ N + P++MSV++TD TSE+RMAE+EKK++ML+K VEE+D EI
Sbjct: 61 NPAMDEHNSLSERSNEEVPQPNIMSVMVTDVDTSEDRMAELEKKVNMLMKAVEERDFEIA 120
Query: 121 SLRNQMESRDVAESSQTPAIK--DKGKIIAQD-QSQHSTSIASLSVQQLQDMIMNSIRAQ 180
L+N +ESRD AESS T IK +KGK I Q+ Q Q+STSIASLSVQQLQ+MI NSI+ Q
Sbjct: 121 LLKNHIESRDAAESSHTHTIKNANKGKAIMQESQPQNSTSIASLSVQQLQEMIANSIKTQ 180
Query: 181 YGGPTQNSLLYSKPYTKRIDNLRMPHGYQPPKFQQFDGKGNPKQHVAHFVETCENDGTRG 240
YGGP Q LYSKPYTKRIDN+RMPHGYQPPKFQQFDGKGNPKQHVAHF+ETCE GTRG
Sbjct: 181 YGGPAQTFSLYSKPYTKRIDNMRMPHGYQPPKFQQFDGKGNPKQHVAHFIETCETAGTRG 240
Query: 241 DQLVRQFVRTLKGNAFDWYTDLEPETIDSWEQLEKEFLNRFYSCRALRS 285
D LV+QFVRTLKGNAFDWYTDLEPE+IDSWEQLE++FLNRFYS R + S
Sbjct: 241 DLLVKQFVRTLKGNAFDWYTDLEPESIDSWEQLERDFLNRFYSTRRIVS 287
BLAST of Lag0005418 vs. ExPASy TrEMBL
Match:
A0A5A7SU65 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold104G00940 PE=4 SV=1)
HSP 1 Score: 315.1 bits (806), Expect = 3.9e-82
Identity = 172/284 (60.56%), Postives = 212/284 (74.65%), Query Frame = 0
Query: 1 MTSEKTFSKIAASSNSYVGPITCSRSKETQHEDSQTPVIANKMLRRMTESAQLEIAAAKN 60
M S+ SK +A+S+SY+G +T S K + E Q V+ K L ++ ES + EI N
Sbjct: 1 MASKNAASKSSAASDSYIGLVTQSHLKRSMQEQEQGFVLKKKSLEQLIESPKGEIIIRDN 60
Query: 61 LMLAKFVSSSQQPNDTSSPDVMSVIMTDAGTSEERMAEVEKKISMLLKMVEEKDQEIVSL 120
+ +S + S +V+SV+M D T+E MA++E+KI+ L+K+VEE+D EI +L
Sbjct: 61 PLFNNSTPASNLSDKESHLEVVSVMMVDV-TAEATMAKMERKINFLMKVVEERDHEIAAL 120
Query: 121 RNQMESRDVAESSQTPAIK--DKGKIIAQDQ--SQHSTSIASLSVQQLQDMIMNSIRAQY 180
++QM++ + AESSQTP +K DK K + Q+ Q S S+ASLSVQQLQDMI NSIRAQY
Sbjct: 121 KDQMKACETAESSQTPVVKATDKEKNVVQENQPQQQSVSVASLSVQQLQDMIENSIRAQY 180
Query: 181 GGPTQNSLLYSKPYTKRIDNLRMPHGYQPPKFQQFDGKGNPKQHVAHFVETCENDGTRGD 240
GGP Q S +YSKPYTKRIDNLRMP GYQPPKFQQFDGKGNPKQH+AHFVETCEN G+RGD
Sbjct: 181 GGPPQTSFMYSKPYTKRIDNLRMPLGYQPPKFQQFDGKGNPKQHIAHFVETCENAGSRGD 240
Query: 241 QLVRQFVRTLKGNAFDWYTDLEPETIDSWEQLEKEFLNRFYSCR 281
QLVRQFVR+LKGNAF+WYTDLEPE IDSWEQLE EFLNRFYS R
Sbjct: 241 QLVRQFVRSLKGNAFEWYTDLEPEVIDSWEQLEIEFLNRFYSTR 283
BLAST of Lag0005418 vs. ExPASy TrEMBL
Match:
A0A5D3DIN4 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold278G00020 PE=4 SV=1)
HSP 1 Score: 314.3 bits (804), Expect = 6.6e-82
Identity = 172/288 (59.72%), Postives = 214/288 (74.31%), Query Frame = 0
Query: 1 MTSEKTFSKIAASSNSYVGPITCSRSKETQHEDSQTPVIANKMLRRMTESAQLEIAAAKN 60
M S+K SK +A+S+SY+G +T S K + E Q V+ K L ++ ES + I N
Sbjct: 1 MASKKVASKSSAASDSYIGLVTQSHLKRSMQEQEQGFVLKKKSLEQLIESPKGRIIIRDN 60
Query: 61 LMLAKFVSSSQQPNDTSSPDVMSVIMTDAGTSEERMAEVEKKISMLLKMVEEKDQEIVSL 120
+ +S + S +V+SV+M D T+E M E+EKKI+ L+K+VEE+D EI +L
Sbjct: 61 PLFNNSTPASNLSDKESHLEVVSVMMVDV-TTEATMVEMEKKINFLMKVVEERDHEIAAL 120
Query: 121 RNQMESRDVAESSQTPAIK--DKGKIIAQDQ--SQHSTSIASLSVQQLQDMIMNSIRAQY 180
++QM++ + AESS+TP +K DKGK + Q+ Q S S+ASLSVQQLQDMI+NSIRAQY
Sbjct: 121 KDQMKAYETAESSKTPVVKATDKGKNVVQENQPQQQSISVASLSVQQLQDMIVNSIRAQY 180
Query: 181 GGPTQNSLLYSKPYTKRIDNLRMPHGYQPPKFQQFDGKGNPKQHVAHFVETCENDGTRGD 240
GGP+Q S +YSKPYTKRIDNLRMP GYQPPKFQQFDGKGNPKQH+AHFVE CEN G+RGD
Sbjct: 181 GGPSQTSFMYSKPYTKRIDNLRMPLGYQPPKFQQFDGKGNPKQHIAHFVEKCENAGSRGD 240
Query: 241 QLVRQFVRTLKGNAFDWYTDLEPETIDSWEQLEKEFLNRFYSCRALRS 285
QLVRQFVR+LKGNAF+WYTDLEPE IDSWEQLE EFLN FYS R + S
Sbjct: 241 QLVRQFVRSLKGNAFEWYTDLEPEVIDSWEQLEIEFLNCFYSTRRVVS 287
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5D3BY54 | 5.8e-86 | 62.32 | Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567... | [more] |
A0A5D3CD35 | 3.5e-83 | 60.56 | Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567... | [more] |
A0A5A7TZU9 | 3.0e-82 | 61.25 | Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold498G00940... | [more] |
A0A5A7SU65 | 3.9e-82 | 60.56 | Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567... | [more] |
A0A5D3DIN4 | 6.6e-82 | 59.72 | Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567... | [more] |
Match Name | E-value | Identity | Description | |