Lag0005369 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTTGATTCTCGTTCTCATGGTGGTTTTCATACTTCTCATCGTCAAATTCCATTTGTTTTGCTACACACCTCTTCATTCTCTGTTCCTCAAGAAACATTGTTGATCGTTCAGAGTTCGAGAGCATTTAATTTCAGAAAACCCCTTTTCCCCAGTTTTGATTTACTAGTTAGAGGCTTTTGCGATCTGAATTCGGATTCGGATTCCAAAATTGAATGTGAGAAGAGTGAGGATGATGATCTTGAGCGTAGTTCAAGGGCGGATTCAACCCAAGTTGATCGTGTATGCAAGGTGATCGATGAATTGTTTGCGTTAGATAGGAACATGGAGGCTATTTTTGATGAATGTGGTTTCAAATTGTCTCACGATCTGGTTTTGGAGGTCTTGGCAAGGTTCAAACAAGCTCGAAAACCAGCATTTAGATTCTTCTGTTGGGCTGCTTAG ATGTTTGATTCTCGTTCTCATGGTGGTTTTCATACTTCTCATCGTCAAATTCCATTTGTTTTGCTACACACCTCTTCATTCTCTGTTCCTCAAGAAACATTGTTGATCGTTCAGAGTTCGAGAGCATTTAATTTCAGAAAACCCCTTTTCCCCAGTTTTGATTTACTAGTTAGAGGCTTTTGCGATCTGAATTCGGATTCGGATTCCAAAATTGAATGTGAGAAGAGTGAGGATGATGATCTTGAGCGTAGTTCAAGGGCGGATTCAACCCAAGTTGATCGTGTATGCAAGGTGATCGATGAATTGTTTGCGTTAGATAGGAACATGGAGGCTATTTTTGATGAATGTGGTTTCAAATTGTCTCACGATCTGGTTTTGGAGGTCTTGGCAAGGTTCAAACAAGCTCGAAAACCAGCATTTAGATTCTTCTGTTGGGCTGCTTAG ATGTTTGATTCTCGTTCTCATGGTGGTTTTCATACTTCTCATCGTCAAATTCCATTTGTTTTGCTACACACCTCTTCATTCTCTGTTCCTCAAGAAACATTGTTGATCGTTCAGAGTTCGAGAGCATTTAATTTCAGAAAACCCCTTTTCCCCAGTTTTGATTTACTAGTTAGAGGCTTTTGCGATCTGAATTCGGATTCGGATTCCAAAATTGAATGTGAGAAGAGTGAGGATGATGATCTTGAGCGTAGTTCAAGGGCGGATTCAACCCAAGTTGATCGTGTATGCAAGGTGATCGATGAATTGTTTGCGTTAGATAGGAACATGGAGGCTATTTTTGATGAATGTGGTTTCAAATTGTCTCACGATCTGGTTTTGGAGGTCTTGGCAAGGTTCAAACAAGCTCGAAAACCAGCATTTAGATTCTTCTGTTGGGCTGCTTAG MFDSRSHGGFHTSHRQIPFVLLHTSSFSVPQETLLIVQSSRAFNFRKPLFPSFDLLVRGFCDLNSDSDSKIECEKSEDDDLERSSRADSTQVDRVCKVIDELFALDRNMEAIFDECGFKLSHDLVLEVLARFKQARKPAFRFFCWAA Homology
BLAST of Lag0005369 vs. NCBI nr
Match: KAA0048071.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYJ96465.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa]) HSP 1 Score: 237.7 bits (605), Expect = 6.6e-59 Identity = 119/148 (80.41%), Postives = 128/148 (86.49%), Query Frame = 0
BLAST of Lag0005369 vs. NCBI nr
Match: XP_008453445.1 (PREDICTED: pentatricopeptide repeat-containing protein At3g62470, mitochondrial-like [Cucumis melo]) HSP 1 Score: 233.0 bits (593), Expect = 1.6e-57 Identity = 116/148 (78.38%), Postives = 127/148 (85.81%), Query Frame = 0
BLAST of Lag0005369 vs. NCBI nr
Match: XP_023537572.1 (pentatricopeptide repeat-containing protein At3g62470, mitochondrial-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 228.4 bits (581), Expect = 4.0e-56 Identity = 114/147 (77.55%), Postives = 122/147 (82.99%), Query Frame = 0
BLAST of Lag0005369 vs. NCBI nr
Match: XP_022937612.1 (pentatricopeptide repeat-containing protein At3g62470, mitochondrial-like [Cucurbita moschata]) HSP 1 Score: 227.3 bits (578), Expect = 8.9e-56 Identity = 113/147 (76.87%), Postives = 121/147 (82.31%), Query Frame = 0
BLAST of Lag0005369 vs. NCBI nr
Match: XP_022965638.1 (pentatricopeptide repeat-containing protein At3g62470, mitochondrial-like [Cucurbita maxima]) HSP 1 Score: 226.1 bits (575), Expect = 2.0e-55 Identity = 113/147 (76.87%), Postives = 121/147 (82.31%), Query Frame = 0
BLAST of Lag0005369 vs. ExPASy Swiss-Prot
Match: Q9LZP3 (Pentatricopeptide repeat-containing protein At3g62470, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g62470 PE=2 SV=1) HSP 1 Score: 100.5 bits (249), Expect = 1.6e-20 Identity = 52/92 (56.52%), Postives = 65/92 (70.65%), Query Frame = 0
BLAST of Lag0005369 vs. ExPASy Swiss-Prot
Match: Q3EAF8 (Pentatricopeptide repeat-containing protein At3g62540, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g62540 PE=2 SV=1) HSP 1 Score: 100.5 bits (249), Expect = 1.6e-20 Identity = 52/92 (56.52%), Postives = 65/92 (70.65%), Query Frame = 0
BLAST of Lag0005369 vs. ExPASy Swiss-Prot
Match: Q9LEQ7 (Pentatricopeptide repeat-containing protein At5g14820, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g14820 PE=2 SV=1) HSP 1 Score: 100.5 bits (249), Expect = 1.6e-20 Identity = 52/92 (56.52%), Postives = 65/92 (70.65%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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