Lag0005232 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0005232
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Retrotran_gag_3 domain-containing protein
Location	chr6: 12459949 .. 12460668 (+)
RNA-Seq Expression	Lag0005232
Synteny	Lag0005232

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACTGTGATCAACGCCACTCTCTCTTCTACAACCCTAGCATGCATTGTAGGCTGTGAAACGTCTCAGCAAGTGTGGGAGACTTTGGTGAAGCATTATTCTTCAAATACTCGTACGAATGTCGTCAAACTCAAGTCTGATCTACAATCCATCGCTAAGAAGCCTTCCGAATCTATTGCTCAGTATATTCAGAGAATCAATGAACTCAAAGATAAGTTGGCTAGTGTTTCTATCGTTATTGATAATGAAGATCTAATCATTTATACTTTGAATGGCCTCTCTGCTGAGTATAATACTTTTCGCACTTCAATGCGAACTCGTGTTCAACCAGTTTCTTTTGAAGAACTTCATGTTCTCTTAGTCTCTTAGTAATCCACGATTGCCAAACAGATCCAGCGTGATGATGCTTTTGCATCTCGTATTGCTCTTTTTGCTAATGCACAGAATCTTAGTCGCAATCAGAATGTTAACCCTAACATTGGTCATGGTCGTGGAATTCCTGGTAAGAATGGCCATGGTCGAGGTAAGTCTCCTTTTCCTAGTAATTTTGGTCGTGGTTGTGGTTTCTGTCCCCTTGGGTCTGGATCTTCTTCTACTAAAACTCCGGATATTTCATCTAATAGTCTGGTGTGTCAGATTTGCCAAAAGCCTGGCCATACTGCTCTTGACTATTTCAACAGGATGAATTATAGCTTTCAAGGTCGTCATCCTCCTGCTTAG

mRNA sequence

ATGACTGTGATCAACGCCACTCTCTCTTCTACAACCCTAGCATGCATTGTAGGCTGTGAAACGTCTCAGCAAGTGTGGGAGACTTTGGTGAAGCATTATTCTTCAAATACTCGTACGAATGTCGTCAAACTCAAGTCTGATCTACAATCCATCGCTAAGAAGCCTTCCGAATCTATTGCTCAGTATATTCAGAGAATCAATGAACTCAAAGATAAGTTGGCTAGTGTTTCTATCGTTATTGATAATGAAGATCTAATCATTTATACTTTGAATGGCCTCTCTGCTGAGTATAATACTTTTCGCACTTCAATGCGAACTCGTGTTCAACCAGTTTCTTTTGAAGAACTTCATAATCTTAGTCGCAATCAGAATGTTAACCCTAACATTGGTCATGGTCGTGGAATTCCTGGTAAGAATGGCCATGGTCGAGGTAAGTCTCCTTTTCCTAGTAATTTTGGTCGTGGTTGTGGTTTCTGTCCCCTTGGGTCTGGATCTTCTTCTACTAAAACTCCGGATATTTCATCTAATAGTCTGGTGTGTCAGATTTGCCAAAAGCCTGGCCATACTGCTCTTGACTATTTCAACAGGATGAATTATAGCTTTCAAGGTCGTCATCCTCCTGCTTAG

Coding sequence (CDS)

ATGACTGTGATCAACGCCACTCTCTCTTCTACAACCCTAGCATGCATTGTAGGCTGTGAAACGTCTCAGCAAGTGTGGGAGACTTTGGTGAAGCATTATTCTTCAAATACTCGTACGAATGTCGTCAAACTCAAGTCTGATCTACAATCCATCGCTAAGAAGCCTTCCGAATCTATTGCTCAGTATATTCAGAGAATCAATGAACTCAAAGATAAGTTGGCTAGTGTTTCTATCGTTATTGATAATGAAGATCTAATCATTTATACTTTGAATGGCCTCTCTGCTGAGTATAATACTTTTCGCACTTCAATGCGAACTCGTGTTCAACCAGTTTCTTTTGAAGAACTTCATAATCTTAGTCGCAATCAGAATGTTAACCCTAACATTGGTCATGGTCGTGGAATTCCTGGTAAGAATGGCCATGGTCGAGGTAAGTCTCCTTTTCCTAGTAATTTTGGTCGTGGTTGTGGTTTCTGTCCCCTTGGGTCTGGATCTTCTTCTACTAAAACTCCGGATATTTCATCTAATAGTCTGGTGTGTCAGATTTGCCAAAAGCCTGGCCATACTGCTCTTGACTATTTCAACAGGATGAATTATAGCTTTCAAGGTCGTCATCCTCCTGCTTAG

Protein sequence

MTVINATLSSTTLACIVGCETSQQVWETLVKHYSSNTRTNVVKLKSDLQSIAKKPSESIAQYIQRINELKDKLASVSIVIDNEDLIIYTLNGLSAEYNTFRTSMRTRVQPVSFEELHNLSRNQNVNPNIGHGRGIPGKNGHGRGKSPFPSNFGRGCGFCPLGSGSSSTKTPDISSNSLVCQICQKPGHTALDYFNRMNYSFQGRHPPA

Homology

[Close]

BLAST of Lag0005232 vs. NCBI nr
Match: XP_022150845.1 (uncharacterized protein LOC111018892 [Momordica charantia])

HSP 1 Score: 194.5 bits (493), Expect = 9.0e-46
Identity = 124/242 (51.24%), Postives = 145/242 (59.92%), Query Frame = 0


Query: 1   MTVINATLSSTTLACIVGCETSQQVWETLVKHYSSNTRTNVVKLKSDLQSIAKKPSESIA 60
           MT+INATLS+  LA +V   TS+QVWE L KHYSSN+RTNVV LKSDLQSI KK  ESI 
Sbjct: 121 MTLINATLSAEALAYVVRSGTSKQVWEVLEKHYSSNSRTNVVNLKSDLQSIVKKTEESID 180

Query: 61  QYIQRINELKDKLASVSIVIDNEDLIIYTLNGLSAEYNTFRTSMRTRVQPVSFEELH--- 120
            Y++RI E+KDK A+VSI I++E L+IY LNGLS EYNT  TSMRTR Q VSFEELH   
Sbjct: 181 AYVKRIKEIKDKFANVSITINDEYLLIYALNGLSTEYNTLSTSMRTRAQSVSFEELHVFM 240

Query: 121 -----------------------------NLSRNQNVNPNIGHGRGIPGKNGHGRGKSPF 180
                                        + +R    +PN  H RG  GKN +GRGK+ F
Sbjct: 241 KSEESAIEKQMKREDLVTQPNALFASSPQSQNRTSAFHPNQSHDRG-RGKN-NGRGKANF 300

Query: 181 PSNF---GRGCGFCPLGSGSSSTKTPDISSNSLVCQICQKPGHTALDYFNRMNYSFQGRH 208
              F   GR       G  S +  T   + N   CQIC K GHTALD +NRMN+ FQGRH
Sbjct: 301 APTFTNQGR-------GRSSGNFFTSFQADNRSPCQICGKLGHTALDCYNRMNFHFQGRH 353

[Close]

BLAST of Lag0005232 vs. NCBI nr
Match: KAE8645659.1 (hypothetical protein Csa_020439 [Cucumis sativus])

HSP 1 Score: 193.4 bits (490), Expect = 2.0e-45
Identity = 123/239 (51.46%), Postives = 143/239 (59.83%), Query Frame = 0


Query: 1   MTVINATLSSTTLACIVGCETSQQVWETLVKHYSSNTRTNVVKLKSDLQSIAKKPSESIA 60
           MTVINATLS   LA +VG  +S+QVW+ L K YSS +R+NVV LKSDLQ+I KKP ESI 
Sbjct: 95  MTVINATLSPEALAYVVGSTSSKQVWDVLAKLYSSGSRSNVVNLKSDLQTIYKKPDESID 154

Query: 61  QYIQRINELKDKLASVSIVIDNEDLIIYTLNGLSAEYNTFRTSMRTRVQPVSFEELHNLS 120
            YI+RI E+KDKLA+VS  I+ EDL+IY LNGL  EYNTFRTSMRTR QPV+FEELH L 
Sbjct: 155 AYIKRIKEIKDKLANVSTFINEEDLLIYALNGLPNEYNTFRTSMRTRSQPVTFEELHVLL 214

Query: 121 R----------------NQ----------------NVNPNIGHGRGIPGKNGHGRGKSPF 180
           R                NQ                  N N   G G  GKN +G G+  F
Sbjct: 215 RAEESALAKQSKCDDSYNQPTVLLSSSQSLLSCAPTFNNNFVRGNG-HGKN-YGHGRFSF 274

Query: 181 PSNFGRGCGFCPLGSGSSSTKTPDISSNSLVCQICQKPGHTALDYFNRMNYSFQGRHPP 208
            +           G G S  + P +  N   CQIC + GHTALD FNRMNY+FQGRHPP
Sbjct: 275 DAQ--------TRGHGLSQEQKP-VHDNHATCQICSRRGHTALDCFNRMNYNFQGRHPP 322

[Close]

BLAST of Lag0005232 vs. NCBI nr
Match: XP_011658579.1 (uncharacterized protein LOC105436058 [Cucumis sativus])

HSP 1 Score: 193.4 bits (490), Expect = 2.0e-45
Identity = 123/239 (51.46%), Postives = 143/239 (59.83%), Query Frame = 0


Query: 1   MTVINATLSSTTLACIVGCETSQQVWETLVKHYSSNTRTNVVKLKSDLQSIAKKPSESIA 60
           MTVINATLS   LA +VG  +S+QVW+ L K YSS +R+NVV LKSDLQ+I KKP ESI 
Sbjct: 95  MTVINATLSPEALAYVVGSTSSKQVWDVLAKLYSSGSRSNVVNLKSDLQTIYKKPDESID 154

Query: 61  QYIQRINELKDKLASVSIVIDNEDLIIYTLNGLSAEYNTFRTSMRTRVQPVSFEELHNLS 120
            YI+RI E+KDKLA+VS  I+ EDL+IY LNGL  EYNTFRTSMRTR QPV+FEELH L 
Sbjct: 155 AYIKRIKEIKDKLANVSTFINEEDLLIYALNGLPNEYNTFRTSMRTRSQPVTFEELHVLL 214

Query: 121 R----------------NQ----------------NVNPNIGHGRGIPGKNGHGRGKSPF 180
           R                NQ                  N N   G G  GKN +G G+  F
Sbjct: 215 RAEESALAKQSKCDDSYNQPTVLLSSSQSLLSCAPTFNNNFVRGNG-HGKN-YGHGRFSF 274

Query: 181 PSNFGRGCGFCPLGSGSSSTKTPDISSNSLVCQICQKPGHTALDYFNRMNYSFQGRHPP 208
            +           G G S  + P +  N   CQIC + GHTALD FNRMNY+FQGRHPP
Sbjct: 275 DAQ--------TRGHGLSQEQKP-VHDNHATCQICSRRGHTALDCFNRMNYNFQGRHPP 322

[Close]

BLAST of Lag0005232 vs. NCBI nr
Match: KAG6588985.1 (Retrovirus-related Pol polyprotein from transposon RE1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 193.0 bits (489), Expect = 2.6e-45
Identity = 121/239 (50.63%), Postives = 143/239 (59.83%), Query Frame = 0


Query: 1   MTVINATLSSTTLACIVGCETSQQVWETLVKHYSSNTRTNVVKLKSDLQSIAKKPSESIA 60
           MTVINATLS   LA +VG  TS+QVW  L K YSS++R+NVV LKSDLQ+I+KK  ESI 
Sbjct: 83  MTVINATLSPEALAYVVGSTTSKQVWNVLAKLYSSSSRSNVVNLKSDLQTISKKSDESID 142

Query: 61  QYIQRINELKDKLASVSIVIDNEDLIIYTLNGLSAEYNTFRTSMRTRVQPVSFEELHNL- 120
            YI+RI E+KDKLA+VS V+++EDL+IY LNGL  EYNTFRTSMRTR  PV+FEELH L 
Sbjct: 143 AYIKRIKEIKDKLANVSTVVNDEDLLIYALNGLPTEYNTFRTSMRTRSTPVTFEELHVLL 202

Query: 121 -------------------------------SRNQNVNPNIGHGRGIPGKNGHGRGKSPF 180
                                          S     N N   GRG     GHG G S F
Sbjct: 203 KAEESALAKQSKRDDLCKQPTALLASSQSLMSYASTFNNNFVRGRG--RGRGHGHGCSSF 262

Query: 181 PSNFGRGCGFCPLGSGSSSTKTPDISSNSLVCQICQKPGHTALDYFNRMNYSFQGRHPP 208
            +  GR       G GSS  +   +++N   CQIC + GH ALD FNRMNY+F GRHPP
Sbjct: 263 DTQ-GR-------GGGSSQQQQLVVANNHSSCQICLRRGHIALDCFNRMNYNFHGRHPP 311

[Close]

BLAST of Lag0005232 vs. NCBI nr
Match: KAG7015254.1 (hypothetical protein SDJN02_22888, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 193.0 bits (489), Expect = 2.6e-45
Identity = 121/239 (50.63%), Postives = 143/239 (59.83%), Query Frame = 0


Query: 1   MTVINATLSSTTLACIVGCETSQQVWETLVKHYSSNTRTNVVKLKSDLQSIAKKPSESIA 60
           MTVINATLS   LA +VG  TS+QVW  L K YSS++R+NVV LKSDLQ+I+KK  ESI 
Sbjct: 83  MTVINATLSPEALAYVVGSTTSKQVWNVLAKLYSSSSRSNVVNLKSDLQTISKKSDESID 142

Query: 61  QYIQRINELKDKLASVSIVIDNEDLIIYTLNGLSAEYNTFRTSMRTRVQPVSFEELHNL- 120
            YI+RI E+KDKLA+VS V+++EDL+IY LNGL  EYNTFRTSMRTR  PV+FEELH L 
Sbjct: 143 AYIKRIKEIKDKLANVSTVVNDEDLLIYALNGLPTEYNTFRTSMRTRSTPVTFEELHVLL 202

Query: 121 -------------------------------SRNQNVNPNIGHGRGIPGKNGHGRGKSPF 180
                                          S     N N   GRG     GHG G S F
Sbjct: 203 KAEESALAKQSKRDDLCKQPTALLASSQSLMSYASTFNNNFVRGRG--RGRGHGHGCSSF 262

Query: 181 PSNFGRGCGFCPLGSGSSSTKTPDISSNSLVCQICQKPGHTALDYFNRMNYSFQGRHPP 208
            +  GR       G GSS  +   +++N   CQIC + GH ALD FNRMNY+F GRHPP
Sbjct: 263 DTQ-GR-------GGGSSQQQQLVVANNHSSCQICLRRGHIALDCFNRMNYNFHGRHPP 311

[Close]

BLAST of Lag0005232 vs. ExPASy TrEMBL
Match: A0A6J1D9L6 (uncharacterized protein LOC111018892 OS=Momordica charantia OX=3673 GN=LOC111018892 PE=4 SV=1)

HSP 1 Score: 194.5 bits (493), Expect = 4.4e-46
Identity = 124/242 (51.24%), Postives = 145/242 (59.92%), Query Frame = 0


Query: 1   MTVINATLSSTTLACIVGCETSQQVWETLVKHYSSNTRTNVVKLKSDLQSIAKKPSESIA 60
           MT+INATLS+  LA +V   TS+QVWE L KHYSSN+RTNVV LKSDLQSI KK  ESI 
Sbjct: 121 MTLINATLSAEALAYVVRSGTSKQVWEVLEKHYSSNSRTNVVNLKSDLQSIVKKTEESID 180

Query: 61  QYIQRINELKDKLASVSIVIDNEDLIIYTLNGLSAEYNTFRTSMRTRVQPVSFEELH--- 120
            Y++RI E+KDK A+VSI I++E L+IY LNGLS EYNT  TSMRTR Q VSFEELH   
Sbjct: 181 AYVKRIKEIKDKFANVSITINDEYLLIYALNGLSTEYNTLSTSMRTRAQSVSFEELHVFM 240

Query: 121 -----------------------------NLSRNQNVNPNIGHGRGIPGKNGHGRGKSPF 180
                                        + +R    +PN  H RG  GKN +GRGK+ F
Sbjct: 241 KSEESAIEKQMKREDLVTQPNALFASSPQSQNRTSAFHPNQSHDRG-RGKN-NGRGKANF 300

Query: 181 PSNF---GRGCGFCPLGSGSSSTKTPDISSNSLVCQICQKPGHTALDYFNRMNYSFQGRH 208
              F   GR       G  S +  T   + N   CQIC K GHTALD +NRMN+ FQGRH
Sbjct: 301 APTFTNQGR-------GRSSGNFFTSFQADNRSPCQICGKLGHTALDCYNRMNFHFQGRH 353

[Close]

BLAST of Lag0005232 vs. ExPASy TrEMBL
Match: A0A5D3CLI6 (T4.5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold106G001120 PE=4 SV=1)

HSP 1 Score: 191.0 bits (484), Expect = 4.8e-45
Identity = 121/239 (50.63%), Postives = 140/239 (58.58%), Query Frame = 0


Query: 1   MTVINATLSSTTLACIVGCETSQQVWETLVKHYSSNTRTNVVKLKSDLQSIAKKPSESIA 60
           MTVINATLS   LA +VG  +S+QVW+ L K YSS +R+NVV LKSDLQ+I KKP ESI 
Sbjct: 97  MTVINATLSPEALAYVVGSTSSKQVWDVLAKLYSSGSRSNVVNLKSDLQTIYKKPDESID 156

Query: 61  QYIQRINELKDKLASVSIVIDNEDLIIYTLNGLSAEYNTFRTSMRTRVQPVSFEELHNLS 120
            YI+RI E+KDKLA+VS  I+ EDL+IY LNGL  EYNTFRTSMRTR QPV+FEELH L 
Sbjct: 157 AYIKRIKEIKDKLANVSTFINEEDLLIYALNGLPNEYNTFRTSMRTRSQPVTFEELHVLL 216

Query: 121 R----------------NQ----------------NVNPNIGHGRGIPGKNGHGRGKSPF 180
           R                NQ                  + N   G G     GHGR     
Sbjct: 217 RAEESALAKQSKGDDSYNQPTVLLSSSQSLLSCAPTFDNNFVRGNGHGKHYGHGRFSFDA 276

Query: 181 PSNFGRGCGFCPLGSGSSSTKTPDISSNSLVCQICQKPGHTALDYFNRMNYSFQGRHPP 208
            +   RG G        SS +   +  N   CQIC + GHTALD FNRMNY+FQGRHPP
Sbjct: 277 QT---RGHG--------SSPEQKSVHDNHATCQICSRRGHTALDCFNRMNYNFQGRHPP 324

[Close]

BLAST of Lag0005232 vs. ExPASy TrEMBL
Match: A0A1S3BI58 (uncharacterized protein LOC103490319 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103490319 PE=4 SV=1)

HSP 1 Score: 191.0 bits (484), Expect = 4.8e-45
Identity = 121/239 (50.63%), Postives = 140/239 (58.58%), Query Frame = 0


Query: 1   MTVINATLSSTTLACIVGCETSQQVWETLVKHYSSNTRTNVVKLKSDLQSIAKKPSESIA 60
           MTVINATLS   LA +VG  +S+QVW+ L K YSS +R+NVV LKSDLQ+I KKP ESI 
Sbjct: 97  MTVINATLSPEALAYVVGSTSSKQVWDVLAKLYSSGSRSNVVNLKSDLQTIYKKPDESID 156

Query: 61  QYIQRINELKDKLASVSIVIDNEDLIIYTLNGLSAEYNTFRTSMRTRVQPVSFEELHNLS 120
            YI+RI E+KDKLA+VS  I+ EDL+IY LNGL  EYNTFRTSMRTR QPV+FEELH L 
Sbjct: 157 AYIKRIKEIKDKLANVSTFINEEDLLIYALNGLPNEYNTFRTSMRTRSQPVTFEELHVLL 216

Query: 121 R----------------NQ----------------NVNPNIGHGRGIPGKNGHGRGKSPF 180
           R                NQ                  + N   G G     GHGR     
Sbjct: 217 RAEESALAKQSKGDDSYNQPTVLLSSSQSLLSCAPTFDNNFVRGNGHGKHYGHGRFSFDA 276

Query: 181 PSNFGRGCGFCPLGSGSSSTKTPDISSNSLVCQICQKPGHTALDYFNRMNYSFQGRHPP 208
            +   RG G        SS +   +  N   CQIC + GHTALD FNRMNY+FQGRHPP
Sbjct: 277 QT---RGHG--------SSPEQKSVHDNHATCQICSRRGHTALDCFNRMNYNFQGRHPP 324

[Close]

BLAST of Lag0005232 vs. ExPASy TrEMBL
Match: A0A1S4DWT9 (uncharacterized protein LOC103490319 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103490319 PE=4 SV=1)

HSP 1 Score: 191.0 bits (484), Expect = 4.8e-45
Identity = 121/239 (50.63%), Postives = 140/239 (58.58%), Query Frame = 0


Query: 1   MTVINATLSSTTLACIVGCETSQQVWETLVKHYSSNTRTNVVKLKSDLQSIAKKPSESIA 60
           MTVINATLS   LA +VG  +S+QVW+ L K YSS +R+NVV LKSDLQ+I KKP ESI 
Sbjct: 97  MTVINATLSPEALAYVVGSTSSKQVWDVLAKLYSSGSRSNVVNLKSDLQTIYKKPDESID 156

Query: 61  QYIQRINELKDKLASVSIVIDNEDLIIYTLNGLSAEYNTFRTSMRTRVQPVSFEELHNLS 120
            YI+RI E+KDKLA+VS  I+ EDL+IY LNGL  EYNTFRTSMRTR QPV+FEELH L 
Sbjct: 157 AYIKRIKEIKDKLANVSTFINEEDLLIYALNGLPNEYNTFRTSMRTRSQPVTFEELHVLL 216

Query: 121 R----------------NQ----------------NVNPNIGHGRGIPGKNGHGRGKSPF 180
           R                NQ                  + N   G G     GHGR     
Sbjct: 217 RAEESALAKQSKGDDSYNQPTVLLSSSQSLLSCAPTFDNNFVRGNGHGKHYGHGRFSFDA 276

Query: 181 PSNFGRGCGFCPLGSGSSSTKTPDISSNSLVCQICQKPGHTALDYFNRMNYSFQGRHPP 208
            +   RG G        SS +   +  N   CQIC + GHTALD FNRMNY+FQGRHPP
Sbjct: 277 QT---RGHG--------SSPEQKSVHDNHATCQICSRRGHTALDCFNRMNYNFQGRHPP 324

[Close]

BLAST of Lag0005232 vs. ExPASy TrEMBL
Match: A0A1S3BIR3 (uncharacterized protein LOC103490319 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103490319 PE=4 SV=1)

HSP 1 Score: 191.0 bits (484), Expect = 4.8e-45
Identity = 121/239 (50.63%), Postives = 140/239 (58.58%), Query Frame = 0


Query: 1   MTVINATLSSTTLACIVGCETSQQVWETLVKHYSSNTRTNVVKLKSDLQSIAKKPSESIA 60
           MTVINATLS   LA +VG  +S+QVW+ L K YSS +R+NVV LKSDLQ+I KKP ESI 
Sbjct: 97  MTVINATLSPEALAYVVGSTSSKQVWDVLAKLYSSGSRSNVVNLKSDLQTIYKKPDESID 156

Query: 61  QYIQRINELKDKLASVSIVIDNEDLIIYTLNGLSAEYNTFRTSMRTRVQPVSFEELHNLS 120
            YI+RI E+KDKLA+VS  I+ EDL+IY LNGL  EYNTFRTSMRTR QPV+FEELH L 
Sbjct: 157 AYIKRIKEIKDKLANVSTFINEEDLLIYALNGLPNEYNTFRTSMRTRSQPVTFEELHVLL 216

Query: 121 R----------------NQ----------------NVNPNIGHGRGIPGKNGHGRGKSPF 180
           R                NQ                  + N   G G     GHGR     
Sbjct: 217 RAEESALAKQSKGDDSYNQPTVLLSSSQSLLSCAPTFDNNFVRGNGHGKHYGHGRFSFDA 276

Query: 181 PSNFGRGCGFCPLGSGSSSTKTPDISSNSLVCQICQKPGHTALDYFNRMNYSFQGRHPP 208
            +   RG G        SS +   +  N   CQIC + GHTALD FNRMNY+FQGRHPP
Sbjct: 277 QT---RGHG--------SSPEQKSVHDNHATCQICSRRGHTALDCFNRMNYNFQGRHPP 324

The following BLAST results are available for this feature:

BLAST of Lag0005232 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022150845.1	9.0e-46	51.24	uncharacterized protein LOC111018892 [Momordica charantia]	[more]
KAE8645659.1	2.0e-45	51.46	hypothetical protein Csa_020439 [Cucumis sativus]	[more]
XP_011658579.1	2.0e-45	51.46	uncharacterized protein LOC105436058 [Cucumis sativus]	[more]
KAG6588985.1	2.6e-45	50.63	Retrovirus-related Pol polyprotein from transposon RE1, partial [Cucurbita argyr...	[more]
KAG7015254.1	2.6e-45	50.63	hypothetical protein SDJN02_22888, partial [Cucurbita argyrosperma subsp. argyro...	[more]

BLAST of Lag0005232 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Lag0005232 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D9L6	4.4e-46	51.24	uncharacterized protein LOC111018892 OS=Momordica charantia OX=3673 GN=LOC111018...	[more]
A0A5D3CLI6	4.8e-45	50.63	T4.5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold106G001120 PE=4 SV=...	[more]
A0A1S3BI58	4.8e-45	50.63	uncharacterized protein LOC103490319 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A1S4DWT9	4.8e-45	50.63	uncharacterized protein LOC103490319 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A1S3BIR3	4.8e-45	50.63	uncharacterized protein LOC103490319 isoform X3 OS=Cucumis melo OX=3656 GN=LOC10...	[more]

BLAST of Lag0005232 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF14223	Retrotran_gag_2	coord: 3..117 e-value: 1.3E-20 score: 73.6
None	No IPR available	PANTHER	PTHR34222:SF48	SUBFAMILY NOT NAMED	coord: 2..194
None	No IPR available	PANTHER	PTHR34222	FAMILY NOT NAMED	coord: 2..194

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0005232.1	Lag0005232.1	mRNA