Lag0000487 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0000487
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
Descriptioninactive poly [ADP-ribose] polymerase RCD1-like
Locationchr4: 8567074 .. 8573408 (+)
RNA-Seq ExpressionLag0000487
SyntenyLag0000487
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAGAATGTATTGCTGAGCGACTGGAGGGAACAAATTCTGTGCTGGAGCAAAGCGAGGAGCAAAACTACCATGTCACAGCTTGTTAGCCAATTTAACAAACTGAATTCTGTTAAGCTATTCTCGGGATAAAGAAGCAAGGAGAGCCATCCACGTGTCTAGGTCAACCTAATTCAAGCCTCCTATCCTTCTACAAAAGGAGATAGCCGTCCAAGTAAAAACATTCCATCTTTGGGAGAAACATTCCATTCTTGGAATGGTTACTTCCACCTTTGGGAGCCAAATAAAGGAGAGATTGGAGATCATCAAGAAGACCATCAATTGCAAGCTGATCAAGGGAATTAATACTTTCTTGCATTATTTTGTAATTATGGATATGCTTACTCAGATTGTAACGTATGTTTCCATGCAACTTATGAACTAAGTAGCTTAGGCGTTGGTTAGGGAACATGTGATTGCCGTGCTTAATTTCTAGTAATAGATATTGGTTAATGCATCTTGATTAATTGTTGTGCTCATTTCTATTTTGTGCCCGCCTAGCCAGCCGGTATGAATACCTCTCTCTAGTTTCAGGGATGATTAATCACACTAGATCATTGTGTATTGGTGAACGCCAGTGACTGAGCTAGAGATAGCCAGTTGCCTAGTGCTTGATCGGTAGTACTTCATTGGAGTTGAAACACATTCCAAAAGATCCGGAGTTCCAAGAGGAATCTACTAATAAGACTGCGAGAGTTTTGCAAGATCAATATGAAGGATTGGAATTCCCAATTCCGTTACAGCGGAAGCAATTGGACCGTTCGTAAATTAATTTTGTTCTACAAAATACCAACGCATTGGTAAAAGGTTAAGCGATGAGAAACATACCTCCGTTGACGACTCTGAATACTTCAACGCCTTTCTTGATTTTGGACCGACACTACAAGAAAATATGTTTTCAGCGACAAATTTTTAGTGGCGCAGCAAAAATAAGTCACTAAAGGTGACTTTCAGCGACATTGTAAACCAGATGTCGCAATTACATATTTTCAGTGACGTGATAAAATTAGATGTGGCTAATAATTTCAGAGACGCATAAACTCACGTTGCAAAAAGTTTTATTTTTAGTAACATGTTTATCATGTTACTAAAGGTTGTGTTTGAAGCCACTAAAGTAACATAAAAATAAGTTTTTTTTAGAAAAACATAAAAATAAGTTAGGTTTTGCTCTTTCCCCCTTCCCTCTTCTATTTTCAGCCCCCTCTCACTTTCCCTCTCTCCCTCGATTTTCATTGTCTCCCGAAGCTCAGGTAGCATACGTCGAAGCTCGTGTCTCAGGTTGCGTACGTCGCCACCGAAGCTCTCGTCTCAAGTCGCCTACGTCGCCGCCAAATCTCGCCGCTGAAGCTCGCGTCTCCGCCCCTTTTCCCTCTCTCCCTTGAGCAAAAGCTTGTCGCCTCCCATCCACGTCGCTCAGCCGCCGTCTTCGTCAATCACTTCCTCGTCGGCCCAACTGTGGTTCGATTTAGGATATCTTCTTCTGAGTTACTATTTTAATTTATTTTTTGTTACTTCTTTATTCTTAGATTTTATTAAAGAGGTTTTTGGTTTATTTTTTATTTGTTCAAGGGGTTTCGGCTGTTGAAGGGCTTCGGGACCAATGGCAATTGAATTGCTCTTCGATTGAATCAGTAAGCCCTTTCACTCTTTGAAACCCCTTTCAATCAGGTACTTATTCTAAACAGAACTCAGTGTCATAGGAGCTAACACCAGTGAAAAGTCCATCATGTAAATAATGCTCAACACTTTTTCCACTTGTGAGAATTTTCGTTCGACGATAAGAGAAAGGAACTTGGCACTTTCCTTGTTTTACCGTAATGATGATCTTCACCCTTGAGTTTGGAGGTACAGTTACAGAGTAAGTCTTTTCAGTCACGTCTCTCTTTTTATTAGTTTCACCCCATTCATGTTTATGTCCATATTCACTTGAAAGCTCAATTTTACTATTTTTAATGAAAGGTTGGGGCTCTAATGTTTTTAATGTTTATGTCCGTCTCTTATGGGCTCTAATATTATGTTCTATGTGGGGTTTTTTAGGTTCTAATTCTAAAATAACCAGGTTTAATTGCCACTCTTGTAAGGTATGGACTTGTGAACCTACGATTATGACACCTATTATTTATGCAATATGATTTAAACTTGATTCTGAGCCAACATAGACTTCCCAAGGTTGCCTCTAATCACGTTCCATCAAAGCTTTTATTCCTATGCATAGTTAAGCTAATTTGTTTTCAGTTCCTCTCTGACCACCTTTACTTCAATATTTGGATGACCTGCCTTTTAGGATTATTCACATTCACAAATTCTAAAATTAATTGCCACCTTATTCGCATTCACAATTCCTTGTTTGATGTCCGGCTGGAGTCAGTTATGTTTCCTACTCACTGAATAAAGTACATATTGCTTCAATATTTGGATGACTTGTCTTTGAGGATTCATTGTTTTGCATTGTTTCTAAATTTTAGGTTCAGGCTTCACCAGCCAAACTACATTTTCTCTATGATTATCATACTATTTACGTTGCTCTTTCACTATTTCAATTGGCACATTACTTAGCATTCTGGGCAAACCAGATTATTGGGTTTTTTTATAGGAAGGCCGAGGAAACAATCTTGTTTTATCAATGCCCTTGTAGTCAAAACTGTAAGCACTCTTTTTCGGACCTTTGGATGCTGTTGGTTTTCAATGGGAAATTTAGAAATTTGGAGCACTTATGCCGTCATCGGTTTAGAAGAAATGAAAACTTTCTTTAGTTAACGCAATGAAAGCTATAATTTGGAACTTTTAAGGGGAAGGTTGAGAATCGGGAAGAAATTTTTTATTTGCAAAGTGTCATTGTGCTGGAAATCACTTAACTGTTTGCAAGCATGATAAGTTTCTATTGTATCAATACAAAGTGTTTTTTTGTTTCCACAAAGAAAAAAAAAGTTTTGTGAAAGAGCTAAAAGAAATCCTCTTTAGACCACACAAGACGAACATGAGAATAGAGAAGAAAGTTTCGGGCGCTCAAATCATTAAGGCAAGATTGTACTTTTTTCTTCCATCTTTAATATTGAGGGAAGTTTTTTGCTTTTAGGAGGATTGTGTGTCCTCGCCAGCTCCTGAAAAGAGATGCACAGAAAAGCCTGACCATGGATCTAGCTCCCTGAAGACTCCAAAGTCCCCATGGATGCTCTTTTCAATGTTGTTTAATGCCATTTCAAAAGAAGTTTCTCTTAATGACATGAAATTGGTGAACGGTGATTATGGCTTATTTAGAGTAAGTGAAAGTGTCTATAAGTGCTTTCCTGTAATTTTATTTGTATAGTTGATAATCTTTATATTTATTTCTTTGTTATGTATTAGGAAAAGAAGATCAATAGGGACGAATTCATTAGAAGGCTGAGGTCCATTGTTGGGGATCCGTTACTGAGGTCTACATTAACGAGTCTCCAGTGCAAGGTATGTTTTATGTTTGATCTTTATTGTTCAGTTCTTGTATGGTGTAGAATCGTTTGGTTGTATTGTGAAAGACTGGCATTTCAACATGGATTATGCGCTGCACAGATGGTTGACATATACTTACAATTTTCTTTTTAATGTGAAAGGCTATTTGTTTGATTAAAACATATACTTACAACTTTGTTTCTGGGTGGTTTATAGTTAAATTGGTAGGAAGTATTCTTCTTTTTTCCAATTCAAAATCTTCTCCAACAGATGGTGAGTTTCAATTACTATAAGTTTGTGGCATAGAAATTTATATCTAACAAAATCTTTTTTGTGTAGTAATGTAGGTTCCAAACCATGTCTGACTCCATTATCACAAATGTTTATTGATGAGTTTGATTACTTGCATTATTTTCTTATTGCTATTTAATGTGCATTTTTCGTTTGTCGGGTCTCAATTTCCTTGTTCTTTTATTTACTGGTATCGAGCCGTGGAATAGGAATAGATTCATAAACTTTAAAACTTCGTCTTGGGAATGCAAAACAACTTCATTGTATTGATTTTGGCATTGGCTAATTTATAGTCTTAAGGTCACATGAGTTTAACATATATTGGAAGAAGTTAACTCTTAAGGTCACATGGGTTTGTACTCTAATCTATATATTTAACATTACAATTTGGTAGTGATGTATTAGAGTATTATTGAATGTGTTAAAAGTTTGAGTATCTAAAATGATGGAATTTTGCCTCTTGAATAGAGTATTATTCTTTCATTTCTTGTCTTGTAACAACATTAAACAATGATAAAGTATGCATGAATTTTTTATAAGTTTGTTGTTATGTTCTAAAGTTTTTCTAAGTTTTGTTTAATTGTTATGTTTATGAATTTTTTATAGGTTAGTTAAGTTTTGTATTTATGTTCAAGAAAATTTCATAACTTTAGTTGTATGTGGAAAATGATTAAAGAAAGGAGAAAAAAGGTAGAAAGTATTGAAGTTCATTTATTTGTTTATAATAATTTGGTATAACTTGAGTGCTATGACTATCCTGCAGTTATGGTAGTCATAACTTAAAATTTGTTGTTTGAGTTCTTAAGTTATTGTGTTTAGGGGGTCAATACCTTGTTTCACTTAGTTTTTTTTAACGAGTTTAGTTATTCATTGATATGTTTATTTGTCGTGGTGTTGTTAATTTGAGTTGTTTCATTGCAAATGGTCTCCATGATATTTGGGATAAGTGTTTAGGGAGTTTATTTTTTCTTGTAGTGAATCACTTAGAGAAGCTTTGAACTTCAGTGAGTTTCAACTCCTTAATGCGTGTCCTCTTCTCTTTTGAACTTCAGTGAGTTTCCATCGATAAGTTTAGTTGTTTCGTTACTTTTGATAATTTGAGATAAGTGCAAAAGTTTTGAGTTGTGATTAACTTAATTTCATTTGGTTTCCACTAAGTTATTGTGTTTAGGAGGGTCGATACCTTATTGCACTTGGTTGTTTTAACTAGTTTAGTTGTTTCATTACACGACTTTTGATAATTTGAGATAAGTGCAAAAGTTTTGAGTTGTTATGATAACTTAAGTGTCACTTGTTTTCCATTAAGTTATTGTACTTAGGAGGGTCAATACGTTGTTGCACTTGGTTATTTTAACGAGTTTAGTTGTTTCTATTGGTAAGTTTATTTTCCACTGTGTTGTTAGGTTGAGTTGTTTCATTGCAAAACGTTTTCATGATTTGCCAAAAACGTTGTGAGTGCATTTAGTTATGAGTTGTTTATTTCACTTACTTTCCATTTAGGTGTTGTGTTTAGGAAGGTCGATACCTATTTGCACTTAAGTATTTTAACTAGTGTAGTTGTTGTGTTTAGGGGGTGGTCAATACATTGTTGCACTTAGTTATTCTAACGAGTTTACTTGTTTTCATTGATATGTTTAGTTGTCACGGTGTTGTTGAGTTGAGTTTGATTGCAAATGACTTTCATGATATTTGGGATAAGTGTTTAGGGAGTTTATTTCGTTGTTTGAGTTGTTCCATTTGCAAAGATGAGTTTCGTTGTTTGATTTGTTAAGGTATTGTGTTTGCAAAGATGAGTTTCGTTGCTCTTCATATAAATTGCTTTGAATGTAGGGGTGGGTTGTTGCTTAGAGATTAAATTATTCATAAGTTTAAGTTTACTTAATTTTGTGGTTGTTTAGTTTAGTTTGTTTTGATAATTTTGTGGTTGTTTAGCTTAGTTTGTTTTGATAGCTTTTAATGAGTTGTTTATTAATTATTTAATCTCAAGCTTACATATTTTATTTCCTTTTGTTTTTCAGCTTGGATGCATGAATGATTTCAACATGGCTCCCCCTTTTTTGTATGGAAATGTGAAGAACGTAGGTTGTTTTTTTTGTTTGTGATCTTTTGTTAGCTATTTTGATGTGTTGTGAATCATTTTGTTTAGTAAACTTCTTCACCTAGACTTGAGATCATTTTAGAAAATTATCAATTTGTATTACATTTTAGACATGTTTCTTTATTATGGTTAATATGAAGTAGTGCATTTTCACTTTAAATTGACATATTACATTTTTTATTTGATTAATTGTAGAATTGTTAATTAGTTTGAACATGGTAATATTATTTTATTTGTAGGTTTACTAATTGAATTAACTATTTATTTTTTTTAAATCATTAACATATTTTTGTGATGTGTGTACTGCGTCACTGAACATAAGATTTTAGTGACGTGTTGATAATGTCACTGAATATCTTTTTCAGCGACAACGGGCCGGATGTTGCTGAAAGTATATGGTTTTAGTGACGTGCTAACTATGTCACTAAACATCTTTTTCTGCGACATCGGGTCGGACGTTACTGAAAGTGATCTTCAGTGA

mRNA sequence

ATGCAGAATGTATTGCTGAGCGACTGGAGGGAACAAATTCTGTGCTGGAGCAAAGCGAGGAGCAAAACTACCATGTCACAGCTTGTTGCGTACGTCGCCACCGAAGCTCTCGTCTCAAGTCGCCTACGTCGCCGCCAAATCTCGCCGCTGAAGCTCGCGTCTCCGCCCCTTTTCCCTCTCTCCCTTGAGCAAAAGCTTGTCGCCTCCCATCCACGTCGCTCAGCCGCCGTCTTCGTCAATCACTTCCTCGTCGGCCCAACTGTGGAGGATTGTGTGTCCTCGCCAGCTCCTGAAAAGAGATGCACAGAAAAGCCTGACCATGGATCTAGCTCCCTGAAGACTCCAAAGTCCCCATGGATGCTCTTTTCAATGTTGTTTAATGCCATTTCAAAAGAAGTTTCTCTTAATGACATGAAATTGGTGAACGGTGATTATGGCTTATTTAGAGAAAAGAAGATCAATAGGGACGAATTCATTAGAAGGCTGAGGTCCATTGTTGGGGATCCGTTACTGAGGTCTACATTAACGAGTCTCCAGTGCAAGCTTGGATGCATGAATGATTTCAACATGGCTCCCCCTTTTTTGTATGGAAATGTGAAGAACGTAGCGACAACGGGCCGGATGTTGCTGAAAGTATATGGTTTTAGTGACGTGCTAACTATGTCACTAAACATCTTTTTCTGCGACATCGGGTCGGACGTTACTGAAAGTGATCTTCAGTGA

Coding sequence (CDS)

ATGCAGAATGTATTGCTGAGCGACTGGAGGGAACAAATTCTGTGCTGGAGCAAAGCGAGGAGCAAAACTACCATGTCACAGCTTGTTGCGTACGTCGCCACCGAAGCTCTCGTCTCAAGTCGCCTACGTCGCCGCCAAATCTCGCCGCTGAAGCTCGCGTCTCCGCCCCTTTTCCCTCTCTCCCTTGAGCAAAAGCTTGTCGCCTCCCATCCACGTCGCTCAGCCGCCGTCTTCGTCAATCACTTCCTCGTCGGCCCAACTGTGGAGGATTGTGTGTCCTCGCCAGCTCCTGAAAAGAGATGCACAGAAAAGCCTGACCATGGATCTAGCTCCCTGAAGACTCCAAAGTCCCCATGGATGCTCTTTTCAATGTTGTTTAATGCCATTTCAAAAGAAGTTTCTCTTAATGACATGAAATTGGTGAACGGTGATTATGGCTTATTTAGAGAAAAGAAGATCAATAGGGACGAATTCATTAGAAGGCTGAGGTCCATTGTTGGGGATCCGTTACTGAGGTCTACATTAACGAGTCTCCAGTGCAAGCTTGGATGCATGAATGATTTCAACATGGCTCCCCCTTTTTTGTATGGAAATGTGAAGAACGTAGCGACAACGGGCCGGATGTTGCTGAAAGTATATGGTTTTAGTGACGTGCTAACTATGTCACTAAACATCTTTTTCTGCGACATCGGGTCGGACGTTACTGAAAGTGATCTTCAGTGA

Protein sequence

MQNVLLSDWREQILCWSKARSKTTMSQLVAYVATEALVSSRLRRRQISPLKLASPPLFPLSLEQKLVASHPRRSAAVFVNHFLVGPTVEDCVSSPAPEKRCTEKPDHGSSSLKTPKSPWMLFSMLFNAISKEVSLNDMKLVNGDYGLFREKKINRDEFIRRLRSIVGDPLLRSTLTSLQCKLGCMNDFNMAPPFLYGNVKNVATTGRMLLKVYGFSDVLTMSLNIFFCDIGSDVTESDLQ
Homology
[Close]
BLAST of Lag0000487 vs. NCBI nr
Match: XP_023553913.1 (inactive poly [ADP-ribose] polymerase RCD1-like [Cucurbita pepo subsp. pepo] >XP_023553914.1 inactive poly [ADP-ribose] polymerase RCD1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 173.7 bits (439), Expect = 1.9e-39
Identity = 87/96 (90.62%), Postives = 89/96 (92.71%), Query Frame = 0 

Query: 87  TVEDCVSSPAPEKRCTEKPDHGSSSLKTPKSPWMLFSMLFNAISKEVSLNDMKLVNGDYG 146
           +VEDCVSSP PEKRCTEK DHGSSSLKTPKSPWM FSMLFNAISKEVSLNDMKLV G Y 
Sbjct: 462 SVEDCVSSPVPEKRCTEKHDHGSSSLKTPKSPWMPFSMLFNAISKEVSLNDMKLVKGHYC 521

Query: 147 LFREKKINRDEFIRRLRSIVGDPLLRSTLTSLQCKL 183
           LFREKKI+RDEFIRRLRSIVGDPLLRS LTSLQCKL
Sbjct: 522 LFREKKISRDEFIRRLRSIVGDPLLRSMLTSLQCKL 557

[Close]
BLAST of Lag0000487 vs. NCBI nr
Match: XP_022963963.1 (inactive poly [ADP-ribose] polymerase RCD1-like isoform X1 [Cucurbita moschata] >XP_022963964.1 inactive poly [ADP-ribose] polymerase RCD1-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 173.7 bits (439), Expect = 1.9e-39
Identity = 87/96 (90.62%), Postives = 89/96 (92.71%), Query Frame = 0 

Query: 87  TVEDCVSSPAPEKRCTEKPDHGSSSLKTPKSPWMLFSMLFNAISKEVSLNDMKLVNGDYG 146
           +VEDCVSSP PEKRCTEK DHGSSSLKTPKSPWM FSMLFNAISKEVSLNDMKLV G Y 
Sbjct: 462 SVEDCVSSPVPEKRCTEKHDHGSSSLKTPKSPWMPFSMLFNAISKEVSLNDMKLVKGHYC 521

Query: 147 LFREKKINRDEFIRRLRSIVGDPLLRSTLTSLQCKL 183
           LFREKKI+RDEFIRRLRSIVGDPLLRS LTSLQCKL
Sbjct: 522 LFREKKISRDEFIRRLRSIVGDPLLRSMLTSLQCKL 557

[Close]
BLAST of Lag0000487 vs. NCBI nr
Match: KAG6571640.1 (Inactive poly [ADP-ribose] polymerase RCD1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 173.7 bits (439), Expect = 1.9e-39
Identity = 87/96 (90.62%), Postives = 89/96 (92.71%), Query Frame = 0 

Query: 87  TVEDCVSSPAPEKRCTEKPDHGSSSLKTPKSPWMLFSMLFNAISKEVSLNDMKLVNGDYG 146
           +VEDCVSSP PEKRCTEK DHGSSSLKTPKSPWM FSMLFNAISKEVSLNDMKLV G Y 
Sbjct: 492 SVEDCVSSPVPEKRCTEKHDHGSSSLKTPKSPWMPFSMLFNAISKEVSLNDMKLVKGHYC 551

Query: 147 LFREKKINRDEFIRRLRSIVGDPLLRSTLTSLQCKL 183
           LFREKKI+RDEFIRRLRSIVGDPLLRS LTSLQCKL
Sbjct: 552 LFREKKISRDEFIRRLRSIVGDPLLRSMLTSLQCKL 587

[Close]
BLAST of Lag0000487 vs. NCBI nr
Match: XP_022967219.1 (inactive poly [ADP-ribose] polymerase RCD1-like isoform X1 [Cucurbita maxima] >XP_022967220.1 inactive poly [ADP-ribose] polymerase RCD1-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 171.4 bits (433), Expect = 9.4e-39
Identity = 86/96 (89.58%), Postives = 88/96 (91.67%), Query Frame = 0 

Query: 87  TVEDCVSSPAPEKRCTEKPDHGSSSLKTPKSPWMLFSMLFNAISKEVSLNDMKLVNGDYG 146
           +VEDCVSSP PEKRCTEK DHGSSSLKTPKSPWM FSMLFNAISKEVSLNDMK V G Y 
Sbjct: 462 SVEDCVSSPVPEKRCTEKHDHGSSSLKTPKSPWMPFSMLFNAISKEVSLNDMKSVKGHYC 521

Query: 147 LFREKKINRDEFIRRLRSIVGDPLLRSTLTSLQCKL 183
           LFREKKI+RDEFIRRLRSIVGDPLLRS LTSLQCKL
Sbjct: 522 LFREKKISRDEFIRRLRSIVGDPLLRSMLTSLQCKL 557

[Close]
BLAST of Lag0000487 vs. NCBI nr
Match: KAG7011369.1 (Inactive poly [ADP-ribose] polymerase RCD1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 171.4 bits (433), Expect = 9.4e-39
Identity = 86/96 (89.58%), Postives = 88/96 (91.67%), Query Frame = 0 

Query: 87  TVEDCVSSPAPEKRCTEKPDHGSSSLKTPKSPWMLFSMLFNAISKEVSLNDMKLVNGDYG 146
           +VEDCVSSP PEKRCTEK DHGSSSLKTPKSPWM FSMLFNAISKEVSLNDMKLV G Y 
Sbjct: 472 SVEDCVSSPVPEKRCTEKHDHGSSSLKTPKSPWMPFSMLFNAISKEVSLNDMKLVKGHYC 531

Query: 147 LFREKKINRDEFIRRLRSIVGDPLLRSTLTSLQCKL 183
           LFREKKI+RDEFIRRLRSIVGDPLLRS L SLQCKL
Sbjct: 532 LFREKKISRDEFIRRLRSIVGDPLLRSMLMSLQCKL 567

[Close]
BLAST of Lag0000487 vs. ExPASy Swiss-Prot
Match: Q8RY59 (Inactive poly [ADP-ribose] polymerase RCD1 OS=Arabidopsis thaliana OX=3702 GN=RCD1 PE=1 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 6.8e-16
Identity = 43/70 (61.43%), Postives = 52/70 (74.29%), Query Frame = 0 

Query: 110 SSLKTPKSPWMLFSMLFNAISKEVSLNDMKLVNGDYGLFREKKINRDEFIRRLRSIVGDP 169
           SS   PKSPWM F  LF AIS +V+ NDM L+N DY   R+KK+ R EF+R+LR IVGD 
Sbjct: 498 SSTTRPKSPWMPFPTLFAAISHKVAENDMLLINADYQQLRDKKMTRAEFVRKLRVIVGDD 557

Query: 170 LLRSTLTSLQ 180
           LLRST+T+LQ
Sbjct: 558 LLRSTITTLQ 567

[Close]
BLAST of Lag0000487 vs. ExPASy Swiss-Prot
Match: O82289 (Probable inactive poly [ADP-ribose] polymerase SRO1 OS=Arabidopsis thaliana OX=3702 GN=SRO1 PE=1 SV=2)

HSP 1 Score: 68.6 bits (166), Expect = 1.1e-10
Identity = 46/108 (42.59%), Postives = 59/108 (54.63%), Query Frame = 0 

Query: 81  HFLVGPTVEDCVSSPAPEKRCTEKPDHG----SSSLKTPKSPWMLFSMLFNAISKEVSLN 140
           H   G T+E    SP+ E         G    SSS + P+SP M F +LF AIS +++  
Sbjct: 461 HESSGLTLEGPKGSPSNEPGRVSNGGSGSEKNSSSSRRPRSPIMPFPLLFKAISSKIARK 520

Query: 141 DMKLVNGDYGLFREKKINRDEFIRRLRSIVG-DPLLRSTLTSLQCKLG 184
           DM L+   Y   REKK++R EF + L  IVG D LL ST+T LQ  LG
Sbjct: 521 DMDLIIAGYQELREKKVSRKEFYKTLSMIVGDDDLLISTITGLQRSLG 568

[Close]
BLAST of Lag0000487 vs. ExPASy Swiss-Prot
Match: Q9STU1 (Probable inactive poly [ADP-ribose] polymerase SRO4 OS=Arabidopsis thaliana OX=3702 GN=SRO4 PE=2 SV=2)

HSP 1 Score: 60.1 bits (144), Expect = 4.0e-08
Identity = 33/92 (35.87%), Postives = 55/92 (59.78%), Query Frame = 0 

Query: 91  CVSSPAPEKRCTEKPDHGSSSLKTPKSPWMLFSMLFNAISKEVSLNDMKLVNGDYGLFRE 150
           C+ +P+  KR            K PKSPW+ F +L N+ISK ++ + ++L++  Y   ++
Sbjct: 233 CIKTPSILKR------------KNPKSPWISFPVLINSISKFLNQSQIRLIHKHYKEHQD 292

Query: 151 KKINRDEFIRRLRSIVGDPLLRSTLTSLQCKL 183
           ++I+R E I+RLRSI GD LL   + S+  K+
Sbjct: 293 RRISRCELIQRLRSITGDSLLVQIIKSVGQKV 312

[Close]
BLAST of Lag0000487 vs. ExPASy Swiss-Prot
Match: Q9ZUD9 (Probable inactive poly [ADP-ribose] polymerase SRO2 OS=Arabidopsis thaliana OX=3702 GN=SRO2 PE=1 SV=1)

HSP 1 Score: 51.6 bits (122), Expect = 1.4e-05
Identity = 22/57 (38.60%), Postives = 36/57 (63.16%), Query Frame = 0 

Query: 115 PKSPWMLFSMLFNAISKEVSLNDMKLVNGDYGLFREKKINRDEFIRRLRSIVGDPLL 172
           P SPW+ F+ L + +S  +  + M L+   Y  FR++KI RD+ +R++R + GD LL
Sbjct: 252 PSSPWVSFASLMSMLSTSMDPSRMNLIIRTYDDFRKRKIRRDQLVRKMREVAGDNLL 308

[Close]
BLAST of Lag0000487 vs. ExPASy Swiss-Prot
Match: Q9FJJ3 (Probable inactive poly [ADP-ribose] polymerase SRO5 OS=Arabidopsis thaliana OX=3702 GN=SRO5 PE=1 SV=1)

HSP 1 Score: 50.1 bits (118), Expect = 4.2e-05
Identity = 26/71 (36.62%), Postives = 42/71 (59.15%), Query Frame = 0 

Query: 101 CTEKPDHGSSSLKTPKSPWMLFSMLFNAISKEVSLNDMKLVNGDYGLFREKKINRDEFIR 160
           C + P + + S K  +SPWM F +L  A+SK +  + + ++   Y   + ++I R E I+
Sbjct: 226 CIKAPFNLTRSPKRLRSPWMAFPVLIKALSKFLPPSQILVIQKHYKDQQNRRITRSELIQ 285

Query: 161 RLRSIVGDPLL 172
           R+RSI GD LL
Sbjct: 286 RVRSITGDKLL 296

[Close]
BLAST of Lag0000487 vs. ExPASy TrEMBL
Match: A0A6J1HJF2 (inactive poly [ADP-ribose] polymerase RCD1-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111464106 PE=4 SV=1)

HSP 1 Score: 173.7 bits (439), Expect = 9.2e-40
Identity = 87/96 (90.62%), Postives = 89/96 (92.71%), Query Frame = 0 

Query: 87  TVEDCVSSPAPEKRCTEKPDHGSSSLKTPKSPWMLFSMLFNAISKEVSLNDMKLVNGDYG 146
           +VEDCVSSP PEKRCTEK DHGSSSLKTPKSPWM FSMLFNAISKEVSLNDMKLV G Y 
Sbjct: 462 SVEDCVSSPVPEKRCTEKHDHGSSSLKTPKSPWMPFSMLFNAISKEVSLNDMKLVKGHYC 521

Query: 147 LFREKKINRDEFIRRLRSIVGDPLLRSTLTSLQCKL 183
           LFREKKI+RDEFIRRLRSIVGDPLLRS LTSLQCKL
Sbjct: 522 LFREKKISRDEFIRRLRSIVGDPLLRSMLTSLQCKL 557

[Close]
BLAST of Lag0000487 vs. ExPASy TrEMBL
Match: A0A6J1HW58 (inactive poly [ADP-ribose] polymerase RCD1-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111466819 PE=4 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 4.6e-39
Identity = 86/96 (89.58%), Postives = 88/96 (91.67%), Query Frame = 0 

Query: 87  TVEDCVSSPAPEKRCTEKPDHGSSSLKTPKSPWMLFSMLFNAISKEVSLNDMKLVNGDYG 146
           +VEDCVSSP PEKRCTEK DHGSSSLKTPKSPWM FSMLFNAISKEVSLNDMK V G Y 
Sbjct: 462 SVEDCVSSPVPEKRCTEKHDHGSSSLKTPKSPWMPFSMLFNAISKEVSLNDMKSVKGHYC 521

Query: 147 LFREKKINRDEFIRRLRSIVGDPLLRSTLTSLQCKL 183
           LFREKKI+RDEFIRRLRSIVGDPLLRS LTSLQCKL
Sbjct: 522 LFREKKISRDEFIRRLRSIVGDPLLRSMLTSLQCKL 557

[Close]
BLAST of Lag0000487 vs. ExPASy TrEMBL
Match: A0A6J1E4V0 (inactive poly [ADP-ribose] polymerase RCD1-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111026079 PE=4 SV=1)

HSP 1 Score: 166.4 bits (420), Expect = 1.5e-37
Identity = 86/106 (81.13%), Postives = 90/106 (84.91%), Query Frame = 0 

Query: 89  EDCVSSPAPEKRCTEK-PDHGSSSLKTPKSPWMLFSMLFNAISKEVSLNDMKLVNGDYGL 148
           EDCVSSPAP KRCT K  DHGSSSLKTPKSPWM FS LFNAISKEVSLNDMKLVNG YGL
Sbjct: 484 EDCVSSPAPVKRCTGKLVDHGSSSLKTPKSPWMPFSKLFNAISKEVSLNDMKLVNGHYGL 543

Query: 149 FREKKINRDEFIRRLRSIVGDPLLRSTLTSLQCKLGCMNDFNMAPP 194
           FREKKI+RDEFI RLRSIVGDPLLRSTLTSLQCK+   + +    P
Sbjct: 544 FREKKISRDEFISRLRSIVGDPLLRSTLTSLQCKVPPKSPYTFKVP 589

[Close]
BLAST of Lag0000487 vs. ExPASy TrEMBL
Match: A0A6J1E0N0 (inactive poly [ADP-ribose] polymerase RCD1-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111026079 PE=4 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 3.3e-37
Identity = 85/94 (90.43%), Postives = 86/94 (91.49%), Query Frame = 0 

Query: 89  EDCVSSPAPEKRCTEK-PDHGSSSLKTPKSPWMLFSMLFNAISKEVSLNDMKLVNGDYGL 148
           EDCVSSPAP KRCT K  DHGSSSLKTPKSPWM FS LFNAISKEVSLNDMKLVNG YGL
Sbjct: 484 EDCVSSPAPVKRCTGKLVDHGSSSLKTPKSPWMPFSKLFNAISKEVSLNDMKLVNGHYGL 543

Query: 149 FREKKINRDEFIRRLRSIVGDPLLRSTLTSLQCK 182
           FREKKI+RDEFI RLRSIVGDPLLRSTLTSLQCK
Sbjct: 544 FREKKISRDEFISRLRSIVGDPLLRSTLTSLQCK 577

[Close]
BLAST of Lag0000487 vs. ExPASy TrEMBL
Match: A0A6J1K3U5 (inactive poly [ADP-ribose] polymerase RCD1-like OS=Cucurbita maxima OX=3661 GN=LOC111491440 PE=4 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 7.3e-37
Identity = 82/94 (87.23%), Postives = 86/94 (91.49%), Query Frame = 0 

Query: 89  EDCVSSPAPEKRCTEKPDHGSSSLKTPKSPWMLFSMLFNAISKEVSLNDMKLVNGDYGLF 148
           EDCVSSPAPEKRCTEK DHGSS LKTPKSPWM FSMLF+AISKEVSL++MKLV   YGLF
Sbjct: 489 EDCVSSPAPEKRCTEKLDHGSSLLKTPKSPWMHFSMLFDAISKEVSLDNMKLVKSHYGLF 548

Query: 149 REKKINRDEFIRRLRSIVGDPLLRSTLTSLQCKL 183
           REKKI+RDEFIRRLRSIVGDPLLRS LTSL CKL
Sbjct: 549 REKKISRDEFIRRLRSIVGDPLLRSMLTSLHCKL 582

[Close]
BLAST of Lag0000487 vs. TAIR 10
Match: AT1G32230.1 (WWE protein-protein interaction domain protein family )

HSP 1 Score: 85.9 bits (211), Expect = 4.9e-17
Identity = 43/70 (61.43%), Postives = 52/70 (74.29%), Query Frame = 0 

Query: 110 SSLKTPKSPWMLFSMLFNAISKEVSLNDMKLVNGDYGLFREKKINRDEFIRRLRSIVGDP 169
           SS   PKSPWM F  LF AIS +V+ NDM L+N DY   R+KK+ R EF+R+LR IVGD 
Sbjct: 498 SSTTRPKSPWMPFPTLFAAISHKVAENDMLLINADYQQLRDKKMTRAEFVRKLRVIVGDD 557

Query: 170 LLRSTLTSLQ 180
           LLRST+T+LQ
Sbjct: 558 LLRSTITTLQ 567

[Close]
BLAST of Lag0000487 vs. TAIR 10
Match: AT1G32230.2 (WWE protein-protein interaction domain protein family )

HSP 1 Score: 85.9 bits (211), Expect = 4.9e-17
Identity = 43/70 (61.43%), Postives = 52/70 (74.29%), Query Frame = 0 

Query: 110 SSLKTPKSPWMLFSMLFNAISKEVSLNDMKLVNGDYGLFREKKINRDEFIRRLRSIVGDP 169
           SS   PKSPWM F  LF AIS +V+ NDM L+N DY   R+KK+ R EF+R+LR IVGD 
Sbjct: 497 SSTTRPKSPWMPFPTLFAAISHKVAENDMLLINADYQQLRDKKMTRAEFVRKLRVIVGDD 556

Query: 170 LLRSTLTSLQ 180
           LLRST+T+LQ
Sbjct: 557 LLRSTITTLQ 566

[Close]
BLAST of Lag0000487 vs. TAIR 10
Match: AT1G32230.3 (WWE protein-protein interaction domain protein family )

HSP 1 Score: 85.9 bits (211), Expect = 4.9e-17
Identity = 43/70 (61.43%), Postives = 52/70 (74.29%), Query Frame = 0 

Query: 110 SSLKTPKSPWMLFSMLFNAISKEVSLNDMKLVNGDYGLFREKKINRDEFIRRLRSIVGDP 169
           SS   PKSPWM F  LF AIS +V+ NDM L+N DY   R+KK+ R EF+R+LR IVGD 
Sbjct: 497 SSTTRPKSPWMPFPTLFAAISHKVAENDMLLINADYQQLRDKKMTRAEFVRKLRVIVGDD 556

Query: 170 LLRSTLTSLQ 180
           LLRST+T+LQ
Sbjct: 557 LLRSTITTLQ 566

[Close]
BLAST of Lag0000487 vs. TAIR 10
Match: AT2G35510.1 (similar to RCD one 1 )

HSP 1 Score: 68.6 bits (166), Expect = 8.0e-12
Identity = 46/108 (42.59%), Postives = 59/108 (54.63%), Query Frame = 0 

Query: 81  HFLVGPTVEDCVSSPAPEKRCTEKPDHG----SSSLKTPKSPWMLFSMLFNAISKEVSLN 140
           H   G T+E    SP+ E         G    SSS + P+SP M F +LF AIS +++  
Sbjct: 461 HESSGLTLEGPKGSPSNEPGRVSNGGSGSEKNSSSSRRPRSPIMPFPLLFKAISSKIARK 520

Query: 141 DMKLVNGDYGLFREKKINRDEFIRRLRSIVG-DPLLRSTLTSLQCKLG 184
           DM L+   Y   REKK++R EF + L  IVG D LL ST+T LQ  LG
Sbjct: 521 DMDLIIAGYQELREKKVSRKEFYKTLSMIVGDDDLLISTITGLQRSLG 568

[Close]
BLAST of Lag0000487 vs. TAIR 10
Match: AT3G47720.1 (similar to RCD one 4 )

HSP 1 Score: 60.1 bits (144), Expect = 2.9e-09
Identity = 33/92 (35.87%), Postives = 55/92 (59.78%), Query Frame = 0 

Query: 91  CVSSPAPEKRCTEKPDHGSSSLKTPKSPWMLFSMLFNAISKEVSLNDMKLVNGDYGLFRE 150
           C+ +P+  KR            K PKSPW+ F +L N+ISK ++ + ++L++  Y   ++
Sbjct: 233 CIKTPSILKR------------KNPKSPWISFPVLINSISKFLNQSQIRLIHKHYKEHQD 292

Query: 151 KKINRDEFIRRLRSIVGDPLLRSTLTSLQCKL 183
           ++I+R E I+RLRSI GD LL   + S+  K+
Sbjct: 293 RRISRCELIQRLRSITGDSLLVQIIKSVGQKV 312

The following BLAST results are available for this feature:
BLAST of Lag0000487 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_023553913.11.9e-3990.63inactive poly [ADP-ribose] polymerase RCD1-like [Cucurbita pepo subsp. pepo] >XP... [more]
XP_022963963.11.9e-3990.63inactive poly [ADP-ribose] polymerase RCD1-like isoform X1 [Cucurbita moschata] ... [more]
KAG6571640.11.9e-3990.63Inactive poly [ADP-ribose] polymerase RCD1, partial [Cucurbita argyrosperma subs... [more]
XP_022967219.19.4e-3989.58inactive poly [ADP-ribose] polymerase RCD1-like isoform X1 [Cucurbita maxima] >X... [more]
KAG7011369.19.4e-3989.58Inactive poly [ADP-ribose] polymerase RCD1, partial [Cucurbita argyrosperma subs... [more]
BLAST of Lag0000487 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q8RY596.8e-1661.43Inactive poly [ADP-ribose] polymerase RCD1 OS=Arabidopsis thaliana OX=3702 GN=RC... [more]
O822891.1e-1042.59Probable inactive poly [ADP-ribose] polymerase SRO1 OS=Arabidopsis thaliana OX=3... [more]
Q9STU14.0e-0835.87Probable inactive poly [ADP-ribose] polymerase SRO4 OS=Arabidopsis thaliana OX=3... [more]
Q9ZUD91.4e-0538.60Probable inactive poly [ADP-ribose] polymerase SRO2 OS=Arabidopsis thaliana OX=3... [more]
Q9FJJ34.2e-0536.62Probable inactive poly [ADP-ribose] polymerase SRO5 OS=Arabidopsis thaliana OX=3... [more]
BLAST of Lag0000487 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1HJF29.2e-4090.63inactive poly [ADP-ribose] polymerase RCD1-like isoform X1 OS=Cucurbita moschata... [more]
A0A6J1HW584.6e-3989.58inactive poly [ADP-ribose] polymerase RCD1-like isoform X1 OS=Cucurbita maxima O... [more]
A0A6J1E4V01.5e-3781.13inactive poly [ADP-ribose] polymerase RCD1-like isoform X1 OS=Momordica charanti... [more]
A0A6J1E0N03.3e-3790.43inactive poly [ADP-ribose] polymerase RCD1-like isoform X2 OS=Momordica charanti... [more]
A0A6J1K3U57.3e-3787.23inactive poly [ADP-ribose] polymerase RCD1-like OS=Cucurbita maxima OX=3661 GN=L... [more]
BLAST of Lag0000487 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G32230.14.9e-1761.43WWE protein-protein interaction domain protein family [more]
AT1G32230.24.9e-1761.43WWE protein-protein interaction domain protein family [more]
AT1G32230.34.9e-1761.43WWE protein-protein interaction domain protein family [more]
AT2G35510.18.0e-1242.59similar to RCD one 1 [more]
AT3G47720.12.9e-0935.87similar to RCD one 4 [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR022003RST domainPFAMPF12174RSTcoord: 115..179
e-value: 1.1E-25
score: 89.3
IPR022003RST domainPROSITEPS51879RSTcoord: 113..184
score: 32.549034
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 96..110
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 93..113
NoneNo IPR availablePANTHERPTHR32263:SF24INACTIVE POLY [ADP-RIBOSE] POLYMERASE RCD1-LIKEcoord: 90..182
IPR044964Inactive poly [ADP-ribose] polymerase RCD1/SRO1-5PANTHERPTHR32263INACTIVE POLY [ADP-RIBOSE] POLYMERASE SRO4-RELATEDcoord: 90..182

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0000487.1Lag0000487.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003950 NAD+ ADP-ribosyltransferase activity