Lag0000333 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0000333
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionCCHC-type domain-containing protein
Locationchr4: 4325482 .. 4330178 (-)
RNA-Seq ExpressionLag0000333
SyntenyLag0000333
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTTTCCCACTTTTCATGTAGAGATCGAGAGCTCCCGATGCTTGATACACTGCCAACGTCTGCTAAAAGTTCTAGATCAAGCTCCAGTACGTGGGTGGAGTTGTACAGTGAGTCCGTCTGTATTGTAAACGTTTTGTAAGGATTGGATAATTTAGGGTTTGTGTAAATCCTTGAGGTTATGGTTGTATAAACCAAGTTGAATATGTTTTTGGTTGTGATATCTTTATCAGGTTATTTTCCAAACCGAGTTATGTCAGGACTGCACCTCATGTATGTTAAAAGGTTTTCAGGGATTACGTTGTGTTGTGTTTCATGTAGAATATTTTATATCTAAGATTAGTATGTTTATCAGATTCAACGTTTCAGGAGGGTCAACGGGTATCGTTAGAGGAGGACGATGTCCATTGGCTTCACGCCATCTTTTGACTAAGCTAGCAGGTGGTCCGGGAGGGGGTGTGACACCTAGACACCTCAGTATTCCCATATACCTACAACACATATCGATCTATCACCTTTGTACCTAGGAGCCTAGATACTTGCTATATACAGTTATGAATAACAACCCCAACCTTTATACACGAATGACCAAATATGCACCTATATATTTTCCTTAACAAAATATTAGCCATCGACCATTTATATTTAAGGCTCTGTTATTCTCCTTACTTCCTCTATTACAAACTTAAGGTCCTCTGACCTTTTTCACTAACTAGGCTCACAACAAGTAAGGCCTTGTTTAATAACCATTTGATTTTTAGTTTCTCGTTTACACTAGTTCTACCAATAAGTTTTTTTGTTTTGTACCTACCACATTCCTATGCTTTCAAAAACCAATTAATTTTTTTAAAACTAAAAATGTAGGTTGCATTTGATAACAATTTGGTTTTTGAAAATTAAGCTTGTTTTCTCCCAACTTTCTTACAATGTTTTTTATCTTTTGTTAAAGACACTGTTGATACTAGATTCTGTATCGTTCGGTCAACGATAAATTTTTATTGAAGGGGAACAATCATGTGCCTGCAACAAAAGGGAACTGAGCACTGGTGTGGTGCTAAGCCACACACACTTTGATGCCCAAGTTAGAATAGGGGTTTAGAAAGTGCTTAGAGAGCTTAGACTGTAGTAAACAAGTCGGTATGGACCTTTTCTTTTGGTAGGGCATTCAATTTATAATACCGAATAGAATATTGTAATGTCTGACATTTATGTTTGTCTTCATTCACAGATCCCTTTAATTGACCATTACGAGTCTACAACCGTCGTTGGACTTGGTCAGCTGTAACGGTCGTTGGCCTCGACCCTTCGCTTGTCGGTAAAACCCTTAAGCGTCTAATATTTGACCCTCATAATTGTTGGTAGACCCGCTCAGGGGTTGGCTGATAGCATGCAAAAATCTTATCATTTTATTCCTTAATTTTAGTTAAATTGCTTAATTGTTTAATGGTTTAATTTTGTTAATTTCAGAATTAATTAGTGGGTCATGAAATGAAGCCCAAAGCCAAGAAGGGGGAGAAAAGAAACCCAAATCTGCAAGCTTTAGCACCTGGATGGTCCAGCTGAAGGTCAACATCTCGATGCTAGGTAGCATGGGCTCAATATAAGCTATGTTTTGGCAACAAAAAATATCATCAAGGAATGAAATGGAGGCTGATATGAGAGCTTAGAATGCAAGATTTGAGAGAGGGTATTTGGGCATTCTTGGGAAGATCAGAGGTGTAACGTCGACATTTTTAAGGTAAATCTCTAATTTGAGTTAATTACGTTTAATTTCTTATTAATTATGCATGGAAAAGAATTAATTAGATTAGGTCTTCGATGAATTTCTTTAAGGGGCGTTTGCATCAATAGCAAAAAGAAAAAGGGAAATTGCAAGCGTGACTTCGATTTATTGGGTTTGCAGATATAGCAAAAAAAGTCTGGGTCGACCCAGACAATAACGTAAAAAAGACTAAAATAACCTCAGGCCCATCCCAAACCATTCCATCTCCTCCAAACCCTAAAAATTTACCTTCACGCGTGTTTCATCTCCACCAAACCCTAAAAATTTACCTTCACGCTTTTCATCTCCCCTCGATTTCACTCGTAGATCTTTGGGCTTCACACGTTTTCATCTCCCTCACTTCTTTCTCTCGATTTCACACGTTCGTCTTCTAACCCAAAACGAGTCGTTTTCTAGCTTTTCCTACAGTAGATTTTTCGACGCCATTTTCGGTGAGTTTGAGTAAGATTTCAATTTTTGGCGCCATTTTCGTCTTCGTCCTCTTTCAAGTTACACATATCGGTTTTGTTCGCTAATCGTTTTGATTTCTTCTAGTTTTCACTGGATTTAGAGAAGGTCGATGCGGTGTCTCATCCGAAATGCTTAGAGTCGGACCCTGGCATTTGAAGAGTGAGAGAGAAGATATCAAGGAGCTCCTAAAGACTACATTCTGCCATCCTAATTTGGTAGTTTTTTCATTATGTGATTCATGATAAGAAGTGTTATTACCTATTAACTGTTGTTTTCCTAGTTCAACTTGAATCGTGTGTAGGTTTGTTTACGAGTTTCATGATAAGAGTGTGATGTATGTTTGTGATTTTTGTTGGTCTCTGTTTTAATCTCTTGTTTAATTTTTTGTTGGTTTTAGTTGGTATATCTAAGAGTTTGATGTATGTTTATGGTTTTTGTTGGCCTCTGTTTTAATCTTTGGTTTAATTTTTTGTTAGTTTTAGTTGGTATATCTAAGACTGTGATGTATGTTTGTGATTTTTGTTGGTCTTTTTTTAATCTTTTGTTTAATTTTTGGTTAGTTTTAGTTGGTATATCTAAGAGTGTGATGTATGTTTGTGGTTTTTGTTGGTCTCTGTTTTAATCTTTTGTTTAATTTTTGGTTAGTTTTAGTTGGTATATCTAAGAGTGTGATGTATGTTTGTGGTTTTTGTTGGTCTCTGTTTTAATCGTTGGTTTAATTTTTTGTTAGTTTTAGTTGGTATATCTAAAGTGTGATGTATGTTTGTGGTTTTTGTTGGTCTTTGTTTTAATCGTTGGTTTAATTTTTTGTTAGTTTTAGTTGGTATATCTAAAGTGTGATGTATGTTTGTGGTTTTTGTTGGTCTCTGTTTTAATCGTTGTTTTAATTTTTTGTTAGTTTTAGTTGGTATATCTAAGAGTCTAATGTATGTTTTTGGGATTTTGTTGGTCTCTGTTTTAATCTTTGGTTTAGAAAGAAAAATGGAAAATGGAGAGTCTTCAGACCGGAAGAAATTAATGAAAAAGGGCGACGAGAGTAAAAAAAGAAAAATGGAAAAAGGTGAGTGTTCAAAAGGAAAAAAAGAGAAAAAAAACCTACTAAAAGTGTGCAAAACAATGAGGTAAGTACATATGTTTAAGATATACTTTTGAAATATTTGAAAAATTACTAAATTCATTGTTTATGGAATATTGATATACTACATGTTTTGTTTTGTACTTTAACAGGAGAATATATCTTGGAACCTAGGCCAAAAGGTTTTGTACTATTCTAAACTGGAGGTTTTAGATAACATAGTAAAAACTCTCACGCCTGACCAGTTAGAGATGTTCAAATTAGGACCATTTGGACACTTTTTAGGTTTTGGAGTTAAAAAGTGTCAAGCTCAACTATTAGTCCACTTGATTAGAAGGATATCTGACACTAGCACTGATGACACACACAGATCTTTCACATAGAAGGCCACATAGCCAAATTTGGCTTAAGGGAATTTTGTTTATTAACTGGTCTTAATTGTAATCCATTCCCCAAAACCATGGAGATCAAACAAAAAGAATCAAAACTTCAATTGAGAAATGCTTTATTTAAAAATCGTGAAAGCATTGAAAGGAAAGATGTAATGGCTGCATTTACAATAGGTTCAACAGATGATCAACTAATGGTCAAAATTGCAAATCTGTACATTTTTTAATGTTTCCTATACAGTAAACAATACCACAATAAGGTGGATTGGAAACACTTAGAGTTGATAGACAATGACGATGCACTTTTGACCTATCCCTGGGGTAGATTGATTTTCAACTTGACAATAGAATATTTTAGGAAGGCGGTCAATCATAAAACTTCAAACTTTCATTACAAGGCTTTCCACATATCCTTCTTTGTTGGGCTTATGAGATAATTCCAAAACTTTCTGAGCCACCAAATGGGATATCAATCCAAATTTGTCAAGAATGCCCTAGGATGTTAAGTTGGCAATCTCACAAGCAGACAGATTGGAATTATCTGCAAGAAAGTATTTTTTCAGCGAGCAATGTAAGTTTGCTACTTATTCAATGTTTCTTAATTGATATATTTCATTTTAGGTATATTACTTAACTGATATAGCCAAATGAAGTATATCAATAACATATTAAGTATATCATCGATTTGATATACTATCATTTTTGGTATATCAGTGATATACCTATACCTAAAAAGAAGTATATTGATATACAGAGTGATATACCAAAAATTGATAGTATATTGATATATTGATATACTTCGATATACTGAATTGATATACTGAAAATGCAGTATATCAGTGATATACTATTTCATTTAAGACATTTAGTTTTTGGTAGGTAAACTTGACTTAATTAACTTCATTCTGTTATTCCAGTTTTCAGTTGTTCCTTTTACACCCAATGAGGATGATTTCACTGCAAGTTACTTCCAACAGTTTGTCAATGATCCAGTGCAATAA

mRNA sequence

ATGTTTTCCCACTTTTCATGTAGAGATCGAGAGCTCCCGATGCTTGATACACTGCCAACGTCTGCTAAAAGTTCTAGATCAAGCTCCAGTACGTGGGTGGAGTTGTACAGTTATTTTCCAAACCGAGTTATGTCAGGACTGCACCTCATATTCAACGTTTCAGGAGGGTCAACGGGTATCGTTAGAGGAGGACGATGTCCATTGGCTTCACGCCATCTTTTGACTAAGCTAGCAGGTGGTCCGGGAGGGGGGGAACAATCATGTGCCTGCAACAAAAGGGAACTGAGCACTGGTGTGGTGCTAAGCCACACACACTTTGATGCCCAAATCCCTTTAATTGACCATTACGAGTCTACAACCGTCGTTGGACTTGTTTTCACTGGATTTAGAGAAGGTCGATGCGGTGTCTCATCCGAAATGCTTAGAGTCGGACCCTGGCATTTGAAGAGTGAGAGAGAAGATATCAAGGAGCTCCTAAAGACTACATTCTGCCATCCTAATTTGGAGAATATATCTTGGAACCTAGGCCAAAAGGTTTTGTACTATTCTAAACTGGAGTTTTCAGTTGTTCCTTTTACACCCAATGAGGATGATTTCACTGCAAGTTACTTCCAACAGTTTGTCAATGATCCAGTGCAATAA

Coding sequence (CDS)

ATGTTTTCCCACTTTTCATGTAGAGATCGAGAGCTCCCGATGCTTGATACACTGCCAACGTCTGCTAAAAGTTCTAGATCAAGCTCCAGTACGTGGGTGGAGTTGTACAGTTATTTTCCAAACCGAGTTATGTCAGGACTGCACCTCATATTCAACGTTTCAGGAGGGTCAACGGGTATCGTTAGAGGAGGACGATGTCCATTGGCTTCACGCCATCTTTTGACTAAGCTAGCAGGTGGTCCGGGAGGGGGGGAACAATCATGTGCCTGCAACAAAAGGGAACTGAGCACTGGTGTGGTGCTAAGCCACACACACTTTGATGCCCAAATCCCTTTAATTGACCATTACGAGTCTACAACCGTCGTTGGACTTGTTTTCACTGGATTTAGAGAAGGTCGATGCGGTGTCTCATCCGAAATGCTTAGAGTCGGACCCTGGCATTTGAAGAGTGAGAGAGAAGATATCAAGGAGCTCCTAAAGACTACATTCTGCCATCCTAATTTGGAGAATATATCTTGGAACCTAGGCCAAAAGGTTTTGTACTATTCTAAACTGGAGTTTTCAGTTGTTCCTTTTACACCCAATGAGGATGATTTCACTGCAAGTTACTTCCAACAGTTTGTCAATGATCCAGTGCAATAA

Protein sequence

MFSHFSCRDRELPMLDTLPTSAKSSRSSSSTWVELYSYFPNRVMSGLHLIFNVSGGSTGIVRGGRCPLASRHLLTKLAGGPGGGEQSCACNKRELSTGVVLSHTHFDAQIPLIDHYESTTVVGLVFTGFREGRCGVSSEMLRVGPWHLKSEREDIKELLKTTFCHPNLENISWNLGQKVLYYSKLEFSVVPFTPNEDDFTASYFQQFVNDPVQ
Homology
[Close]
BLAST of Lag0000333 vs. NCBI nr
Match: TYK05620.1 (uncharacterized protein E5676_scaffold98G00770 [Cucumis melo var. makuwa])

HSP 1 Score: 85.5 bits (210), Expect = 6.1e-13
Identity = 49/85 (57.65%), Postives = 56/85 (65.88%), Query Frame = 0 

Query: 11 ELPMLDTLPTSAKSSRSSSSTWVELY-----------SYFPNRVMSGLHLIFNVSGGSTG 70
          ELP+ DTLPTSA+SS S S+TW+ELY             F N+VM GLHL+FNVS GSTG
Sbjct: 10 ELPVPDTLPTSAESSGSKSNTWLELYFESVHVEIFCKVIFANQVMLGLHLMFNVSVGSTG 69

Query: 71 IVRGGRCPLASRHLLTKLAGGPGGG 85
          IVRG    L    L TK+ GGPGGG
Sbjct: 70 IVRGDDVWLIHAVLRTKITGGPGGG 94

[Close]
BLAST of Lag0000333 vs. NCBI nr
Match: KAA0051980.1 (DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa] >TYK04577.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 85.5 bits (210), Expect = 6.1e-13
Identity = 48/83 (57.83%), Postives = 55/83 (66.27%), Query Frame = 0 

Query: 11  ELPMLDTLPTSAKSSRSSSSTW---------VELYSYFPNRVMSGLHLIFNVSGGSTGIV 70
           ELP+ DTLPTSA+SS S+SSTW         VE++ YF N+VMSGLHL+FNVS GST IV
Sbjct: 67  ELPVPDTLPTSAESSGSNSSTWLELNFEFVHVEIFYYFTNQVMSGLHLVFNVSVGSTRIV 126

Query: 71  RGGRCPLASRHLLTKLAGGPGGG 85
           RG            K AGGPGGG
Sbjct: 127 RGDNVCWLHAVFWAKTAGGPGGG 149

[Close]
BLAST of Lag0000333 vs. NCBI nr
Match: KAA0040577.1 (uncharacterized protein E6C27_scaffold262G001470 [Cucumis melo var. makuwa])

HSP 1 Score: 85.5 bits (210), Expect = 6.1e-13
Identity = 49/85 (57.65%), Postives = 56/85 (65.88%), Query Frame = 0 

Query: 11 ELPMLDTLPTSAKSSRSSSSTWVELY-----------SYFPNRVMSGLHLIFNVSGGSTG 70
          ELP+ DTLPTSA+SS S S+TW+ELY             F N+VM GLHL+FNVS GSTG
Sbjct: 10 ELPVPDTLPTSAESSGSKSNTWLELYFESVHVEIFCKVIFANQVMLGLHLMFNVSVGSTG 69

Query: 71 IVRGGRCPLASRHLLTKLAGGPGGG 85
          IVRG    L    L TK+ GGPGGG
Sbjct: 70 IVRGDDVWLIHAVLRTKITGGPGGG 94

[Close]
BLAST of Lag0000333 vs. NCBI nr
Match: KAA0062409.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 81.3 bits (199), Expect = 1.1e-11
Identity = 46/83 (55.42%), Postives = 53/83 (63.86%), Query Frame = 0 

Query: 11  ELPMLDTLPTSAKSSRSSSSTWVELY---------SYFPNRVMSGLHLIFNVSGGSTGIV 70
           ELP+ DTLPTSA+SS S+SSTW+ELY          YF N+VMS LHL+F+V  GSTGIV
Sbjct: 97  ELPVPDTLPTSAESSESNSSTWLELYFESVHVEMFCYFTNQVMSRLHLVFSVLVGSTGIV 156

Query: 71  RGGRCPLASRHLLTKLAGGPGGG 85
           RG            K  GGPGGG
Sbjct: 157 RGDDVCWLHAVFRAKTVGGPGGG 179

[Close]
BLAST of Lag0000333 vs. NCBI nr
Match: TYK11835.1 (uncharacterized protein E5676_scaffold152G00520 [Cucumis melo var. makuwa])

HSP 1 Score: 81.3 bits (199), Expect = 1.1e-11
Identity = 47/83 (56.63%), Postives = 53/83 (63.86%), Query Frame = 0 

Query: 11  ELPMLDTLPTSAKSSRSSSSTWVELY---------SYFPNRVMSGLHLIFNVSGGSTGIV 70
           ELP+ DTLPTSA+SS S+SSTW+ELY           F N+VMS LHL+FNVS GSTGIV
Sbjct: 97  ELPVPDTLPTSAESSGSNSSTWLELYFESVHVEMFCSFTNQVMSELHLVFNVSVGSTGIV 156

Query: 71  RGGRCPLASRHLLTKLAGGPGGG 85
           RG            K  GGPGGG
Sbjct: 157 RGDDVCWLHAVFRAKTVGGPGGG 179

[Close]
BLAST of Lag0000333 vs. ExPASy Swiss-Prot
Match: Q69SV0 (Probable L-ascorbate peroxidase 8, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=APX8 PE=1 SV=2)

HSP 1 Score: 45.4 bits (106), Expect = 9.1e-04
Identity = 18/42 (42.86%), Postives = 27/42 (64.29%), Query Frame = 0 

Query: 133 RCGVSSEMLRVGPWHLKSEREDIKELLKTTFCHPNLENISWN 175
           RC  ++ +       LKS REDI+E+LKTT+CHP +  + W+
Sbjct: 76  RCMAAAAVAASDAAQLKSAREDIREILKTTYCHPIMVRLGWH 117

[Close]
BLAST of Lag0000333 vs. ExPASy TrEMBL
Match: A0A5A7U9X4 (DNA/RNA polymerases superfamily protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold409G002130 PE=4 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 2.9e-13
Identity = 48/83 (57.83%), Postives = 55/83 (66.27%), Query Frame = 0 

Query: 11  ELPMLDTLPTSAKSSRSSSSTW---------VELYSYFPNRVMSGLHLIFNVSGGSTGIV 70
           ELP+ DTLPTSA+SS S+SSTW         VE++ YF N+VMSGLHL+FNVS GST IV
Sbjct: 67  ELPVPDTLPTSAESSGSNSSTWLELNFEFVHVEIFYYFTNQVMSGLHLVFNVSVGSTRIV 126

Query: 71  RGGRCPLASRHLLTKLAGGPGGG 85
           RG            K AGGPGGG
Sbjct: 127 RGDNVCWLHAVFWAKTAGGPGGG 149

[Close]
BLAST of Lag0000333 vs. ExPASy TrEMBL
Match: A0A5D3C2P9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold98G00770 PE=4 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 2.9e-13
Identity = 49/85 (57.65%), Postives = 56/85 (65.88%), Query Frame = 0 

Query: 11 ELPMLDTLPTSAKSSRSSSSTWVELY-----------SYFPNRVMSGLHLIFNVSGGSTG 70
          ELP+ DTLPTSA+SS S S+TW+ELY             F N+VM GLHL+FNVS GSTG
Sbjct: 10 ELPVPDTLPTSAESSGSKSNTWLELYFESVHVEIFCKVIFANQVMLGLHLMFNVSVGSTG 69

Query: 71 IVRGGRCPLASRHLLTKLAGGPGGG 85
          IVRG    L    L TK+ GGPGGG
Sbjct: 70 IVRGDDVWLIHAVLRTKITGGPGGG 94

[Close]
BLAST of Lag0000333 vs. ExPASy TrEMBL
Match: A0A5A7TG84 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold262G001470 PE=4 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 2.9e-13
Identity = 49/85 (57.65%), Postives = 56/85 (65.88%), Query Frame = 0 

Query: 11 ELPMLDTLPTSAKSSRSSSSTWVELY-----------SYFPNRVMSGLHLIFNVSGGSTG 70
          ELP+ DTLPTSA+SS S S+TW+ELY             F N+VM GLHL+FNVS GSTG
Sbjct: 10 ELPVPDTLPTSAESSGSKSNTWLELYFESVHVEIFCKVIFANQVMLGLHLMFNVSVGSTG 69

Query: 71 IVRGGRCPLASRHLLTKLAGGPGGG 85
          IVRG    L    L TK+ GGPGGG
Sbjct: 70 IVRGDDVWLIHAVLRTKITGGPGGG 94

[Close]
BLAST of Lag0000333 vs. ExPASy TrEMBL
Match: A0A5D3CJX3 (CCHC-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold152G00520 PE=4 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 5.5e-12
Identity = 47/83 (56.63%), Postives = 53/83 (63.86%), Query Frame = 0 

Query: 11  ELPMLDTLPTSAKSSRSSSSTWVELY---------SYFPNRVMSGLHLIFNVSGGSTGIV 70
           ELP+ DTLPTSA+SS S+SSTW+ELY           F N+VMS LHL+FNVS GSTGIV
Sbjct: 97  ELPVPDTLPTSAESSGSNSSTWLELYFESVHVEMFCSFTNQVMSELHLVFNVSVGSTGIV 156

Query: 71  RGGRCPLASRHLLTKLAGGPGGG 85
           RG            K  GGPGGG
Sbjct: 157 RGDDVCWLHAVFRAKTVGGPGGG 179

[Close]
BLAST of Lag0000333 vs. ExPASy TrEMBL
Match: A0A5A7V9N3 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold154G002110 PE=4 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 5.5e-12
Identity = 46/83 (55.42%), Postives = 53/83 (63.86%), Query Frame = 0 

Query: 11  ELPMLDTLPTSAKSSRSSSSTWVELY---------SYFPNRVMSGLHLIFNVSGGSTGIV 70
           ELP+ DTLPTSA+SS S+SSTW+ELY          YF N+VMS LHL+F+V  GSTGIV
Sbjct: 97  ELPVPDTLPTSAESSESNSSTWLELYFESVHVEMFCYFTNQVMSRLHLVFSVLVGSTGIV 156

Query: 71  RGGRCPLASRHLLTKLAGGPGGG 85
           RG            K  GGPGGG
Sbjct: 157 RGDDVCWLHAVFRAKTVGGPGGG 179

[Close]
BLAST of Lag0000333 vs. TAIR 10
Match: AT4G08390.1 (stromal ascorbate peroxidase )

HSP 1 Score: 43.1 bits (100), Expect = 3.2e-04
Identity = 18/30 (60.00%), Postives = 21/30 (70.00%), Query Frame = 0 

Query: 145 PWHLKSEREDIKELLKTTFCHPNLENISWN 175
           P  LK+ REDIKELL T FCHP L  + W+
Sbjct: 104 PDQLKNAREDIKELLSTKFCHPILVRLGWH 133

[Close]
BLAST of Lag0000333 vs. TAIR 10
Match: AT4G08390.2 (stromal ascorbate peroxidase )

HSP 1 Score: 43.1 bits (100), Expect = 3.2e-04
Identity = 18/30 (60.00%), Postives = 21/30 (70.00%), Query Frame = 0 

Query: 145 PWHLKSEREDIKELLKTTFCHPNLENISWN 175
           P  LK+ REDIKELL T FCHP L  + W+
Sbjct: 104 PDQLKNAREDIKELLSTKFCHPILVRLGWH 133

[Close]
BLAST of Lag0000333 vs. TAIR 10
Match: AT4G08390.3 (stromal ascorbate peroxidase )

HSP 1 Score: 43.1 bits (100), Expect = 3.2e-04
Identity = 18/30 (60.00%), Postives = 21/30 (70.00%), Query Frame = 0 

Query: 145 PWHLKSEREDIKELLKTTFCHPNLENISWN 175
           P  LK+ REDIKELL T FCHP L  + W+
Sbjct: 103 PDQLKNAREDIKELLSTKFCHPILVRLGWH 132

[Close]
BLAST of Lag0000333 vs. TAIR 10
Match: AT4G08390.4 (stromal ascorbate peroxidase )

HSP 1 Score: 43.1 bits (100), Expect = 3.2e-04
Identity = 18/30 (60.00%), Postives = 21/30 (70.00%), Query Frame = 0 

Query: 145 PWHLKSEREDIKELLKTTFCHPNLENISWN 175
           P  LK+ REDIKELL T FCHP L  + W+
Sbjct: 104 PDQLKNAREDIKELLSTKFCHPILVRLGWH 133

The following BLAST results are available for this feature:
BLAST of Lag0000333 vs. NCBI nr
Match NameE-valueIdentityDescription
TYK05620.16.1e-1357.65uncharacterized protein E5676_scaffold98G00770 [Cucumis melo var. makuwa][more]
KAA0051980.16.1e-1357.83DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa] >TYK04577.1 D... [more]
KAA0040577.16.1e-1357.65uncharacterized protein E6C27_scaffold262G001470 [Cucumis melo var. makuwa][more]
KAA0062409.11.1e-1155.42reverse transcriptase [Cucumis melo var. makuwa][more]
TYK11835.11.1e-1156.63uncharacterized protein E5676_scaffold152G00520 [Cucumis melo var. makuwa][more]
BLAST of Lag0000333 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q69SV09.1e-0442.86Probable L-ascorbate peroxidase 8, chloroplastic OS=Oryza sativa subsp. japonica... [more]
BLAST of Lag0000333 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7U9X42.9e-1357.83DNA/RNA polymerases superfamily protein OS=Cucumis melo var. makuwa OX=1194695 G... [more]
A0A5D3C2P92.9e-1357.65Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7TG842.9e-1357.65Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5D3CJX35.5e-1256.63CCHC-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5... [more]
A0A5A7V9N35.5e-1255.42Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold15... [more]
BLAST of Lag0000333 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G08390.13.2e-0460.00stromal ascorbate peroxidase [more]
AT4G08390.23.2e-0460.00stromal ascorbate peroxidase [more]
AT4G08390.33.2e-0460.00stromal ascorbate peroxidase [more]
AT4G08390.43.2e-0460.00stromal ascorbate peroxidase [more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0000333.1Lag0000333.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0090304 nucleic acid metabolic process
molecular_function GO:0003824 catalytic activity