IVF0025787 (gene) Melon (IVF77) v1

Overview


Name	IVF0025787
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	thioredoxin H-type-like
Location	chr10: 7673341 .. 7674706 (-)
RNA-Seq Expression	IVF0025787
Synteny	IVF0025787

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAGAAATGGGGAAAGTTATTTCTTGCCACACTGTTTCTTCATGGAAGCAGCACCTACTCAAGGCCGAACAATACAACAAGCTGGTATATATATCTCTACTTTTTGTTTATTTAATTTCCAAACTCAAATCCGTTTGATATTTTTTTGCTTTTGAAGTAGGGTTTTATAATACCACATGAAACACTTATTTTCTCTTTTAATAATTCTAAAAACAATAACAAATATTTGAAAACTAACATTTCCAATAATTTATTTTTGTCGTTTTAAAAGTTTCGTCAAGAACTCAAGTATTTCCTCACCAAATGTATAAATCATAATATAAAATTTAAGAGAAAACAAACATAATTTTTTTTGAGAAAAAATAAATTTAAAACATATGATTACAAATTATAACCGATAATAAAAATTAGCTCTGTTGATATAAATGACATTTAAGCCAAAAATAATAAAATACACGACACAATGATAAAATAATAGAATTTTTAAAAGTCTAAAAAATCAACATGAACCCTTTGTTTTTTTTTTTCCGAGTTTTTTAAATTAAAAATTATCACTAATAGCTGCTATCATCGATAGTTGCTATGAGTTGTTATCACTGTTAGTTATAGTTTTCTATTTTGCACCATTATGAGTGCTTCTAATTGGTTTCTAAAAAACCTATCATCAATAGTAGTGTTGTTGATGATAACAATTGATAGATACTACCGCTGATAGCCTTCAATTTGAGAAATGTATGCTATCAGTTACTATCATTGACATCAACTATCATTGATAACGATTCTATTAGTGATAGTTAAGAGCATACTTGATGTTAAAAAATATTACCAACTATTGGTCGGTCAACATTTGCTATGTTTGTAAATATATATATATATATATATATATATATATTTTGATATTTTTATGTTAATTTTTAAATTGTGCTCTTAAAAATTATTATGAAAACGAGACTGTAGCTAACAATTGCACTATTCTAATTGGTAGGTGGTTGTGAACTTCACAGCTTCATGGTGTGGCCCATGTCGTTTCATGGCTCCAATTCTTGAAGAGTTGGCAAAGAAAATGAGTAATAATGTCATATTCTTGAAAGTTGATATTGATGAACTGATGGTGAGTTAAAAAGAAAAAGAAAAAGAAAAAGAAAAAGAAATTATTCGATCACATGCTTTTGCTGATGCAATTTTGTTAATTAGAATTGAGATTTAATTTTAGTACTGTATTTTACAGAGTATTGCAAAGGAGTTTGGAGTAAGTTCGGTTCCTTCATTTCAATTCTTAAAGAATGGAAAACTGGTGGACAAGTTCGTGGGTGCAAAGAAAAATTTACTCCAAAGCACTATTTCCAAACATTCAGCCAAGTGA

mRNA sequence

ATGGCAGAAATGGGGAAAGTTATTTCTTGCCACACTGTTTCTTCATGGAAGCAGCACCTACTCAAGGCCGAACAATACAACAAGCTGGTGGTTGTGAACTTCACAGCTTCATGGTGTGGCCCATGTCGTTTCATGGCTCCAATTCTTGAAGAGTTGGCAAAGAAAATGAGTAATAATGTCATATTCTTGAAAGTTGATATTGATGAACTGATGAGTATTGCAAAGGAGTTTGGAGTAAGTTCGGTTCCTTCATTTCAATTCTTAAAGAATGGAAAACTGGTGGACAAGTTCGTGGGTGCAAAGAAAAATTTACTCCAAAGCACTATTTCCAAACATTCAGCCAAGTGA

Coding sequence (CDS)

ATGGCAGAAATGGGGAAAGTTATTTCTTGCCACACTGTTTCTTCATGGAAGCAGCACCTACTCAAGGCCGAACAATACAACAAGCTGGTGGTTGTGAACTTCACAGCTTCATGGTGTGGCCCATGTCGTTTCATGGCTCCAATTCTTGAAGAGTTGGCAAAGAAAATGAGTAATAATGTCATATTCTTGAAAGTTGATATTGATGAACTGATGAGTATTGCAAAGGAGTTTGGAGTAAGTTCGGTTCCTTCATTTCAATTCTTAAAGAATGGAAAACTGGTGGACAAGTTCGTGGGTGCAAAGAAAAATTTACTCCAAAGCACTATTTCCAAACATTCAGCCAAGTGA

Protein sequence

MAEMGKVISCHTVSSWKQHLLKAEQYNKLVVVNFTASWCGPCRFMAPILEELAKKMSNNVIFLKVDIDELMSIAKEFGVSSVPSFQFLKNGKLVDKFVGAKKNLLQSTISKHSAK

Homology

[Close]

BLAST of IVF0025787 vs. ExPASy Swiss-Prot
Match: Q43636 (Thioredoxin H-type OS=Ricinus communis OX=3988 PE=3 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 2.7e-34
Identity = 69/113 (61.06%), Postives = 86/113 (76.11%), Query Frame = 0


Query: 2   AEMGKVISCHTVSSWKQHLLKAEQYNKLVVVNFTASWCGPCRFMAPILEELAKKMSNNVI 61
           AE G+VI CHTV +W + L K      L+VV+FTASWCGPCRF+AP L ELAKK+  NV 
Sbjct: 3   AEEGQVIGCHTVEAWNEQLQKGNDTKGLIVVDFTASWCGPCRFIAPFLAELAKKLP-NVT 62

Query: 62  FLKVDIDELMSIAKEFGVSSVPSFQFLKNGKLVDKFVGAKKNLLQSTISKHSA 115
           FLKVD+DEL ++A E+ V S+P+F FLK GK++DK VGAKK+ LQ TI+KH A
Sbjct: 63  FLKVDVDELKTVAHEWAVESMPTFMFLKEGKIMDKVVGAKKDELQQTIAKHMA 114

[Close]

BLAST of IVF0025787 vs. ExPASy Swiss-Prot
Match: P29448 (Thioredoxin H1 OS=Arabidopsis thaliana OX=3702 GN=TRX1 PE=1 SV=1)

HSP 1 Score: 145.2 bits (365), Expect = 4.6e-34
Identity = 67/113 (59.29%), Postives = 89/113 (78.76%), Query Frame = 0


Query: 2   AEMGKVISCHTVSSWKQHLLKAEQYNKLVVVNFTASWCGPCRFMAPILEELAKKMSNNVI 61
           +E G+VI+CHTV +W + L KA +   LVVV+FTASWCGPCRF+AP   +LAKK+  NV+
Sbjct: 3   SEEGQVIACHTVETWNEQLQKANESKTLVVVDFTASWCGPCRFIAPFFADLAKKLP-NVL 62

Query: 62  FLKVDIDELMSIAKEFGVSSVPSFQFLKNGKLVDKFVGAKKNLLQSTISKHSA 115
           FLKVD DEL S+A ++ + ++P+F FLK GK++DK VGAKK+ LQSTI+KH A
Sbjct: 63  FLKVDTDELKSVASDWAIQAMPTFMFLKEGKILDKVVGAKKDELQSTIAKHLA 114

[Close]

BLAST of IVF0025787 vs. ExPASy Swiss-Prot
Match: Q07090 (Thioredoxin H-type 2 OS=Nicotiana tabacum OX=4097 PE=3 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 2.5e-32
Identity = 67/112 (59.82%), Postives = 84/112 (75.00%), Query Frame = 0


Query: 1   MAEMGKVISCHTVSSWKQHLLKAEQYNKLVVVNFTASWCGPCRFMAPILEELAKKMSNNV 60
           MAE G+VI  HTV +W +HL K     KL+VV+FTASWCGPC+F+A    ELAKKM   V
Sbjct: 1   MAEEGQVIGVHTVDAWNEHLQKGIDDKKLIVVDFTASWCGPCKFIASFYAELAKKMP-TV 60

Query: 61  IFLKVDIDELMSIAKEFGVSSVPSFQFLKNGKLVDKFVGAKKNLLQSTISKH 113
            FLKVD+DEL S+A ++ V ++P+F FLK GK+VDK VGAKK+ LQ TI+KH
Sbjct: 61  TFLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVGAKKDELQQTIAKH 111

[Close]

BLAST of IVF0025787 vs. ExPASy Swiss-Prot
Match: Q39239 (Thioredoxin H4 OS=Arabidopsis thaliana OX=3702 GN=TRX4 PE=1 SV=2)

HSP 1 Score: 139.4 bits (350), Expect = 2.5e-32
Identity = 64/112 (57.14%), Postives = 84/112 (75.00%), Query Frame = 0


Query: 2   AEMGKVISCHTVSSWKQHLLKAEQYNKLVVVNFTASWCGPCRFMAPILEELAKKMSNNVI 61
           AE G+VI CHT   W   L KA++ NKL+V++FTASWC PCR +API  +LAKK  ++ I
Sbjct: 3   AEEGQVIGCHTNDVWTVQLDKAKESNKLIVIDFTASWCPPCRMIAPIFNDLAKKFMSSAI 62

Query: 62  FLKVDIDELMSIAKEFGVSSVPSFQFLKNGKLVDKFVGAKKNLLQSTISKHS 114
           F KVD+DEL S+AKEFGV ++P+F F+K G++VDK VGA K  LQ+ I KH+
Sbjct: 63  FFKVDVDELQSVAKEFGVEAMPTFVFIKAGEVVDKLVGANKEDLQAKIVKHT 114

[Close]

BLAST of IVF0025787 vs. ExPASy Swiss-Prot
Match: P29449 (Thioredoxin H-type 1 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 9.5e-32
Identity = 64/113 (56.64%), Postives = 86/113 (76.11%), Query Frame = 0


Query: 2   AEMGKVISCHTVSSWKQHLLKAEQYNKLVVVNFTASWCGPCRFMAPILEELAKKMSNNVI 61
           +E G+V  CH V  W ++  K  +  KLVVV+FTASWCGPCRF+APIL ++AKKM  +VI
Sbjct: 9   SEEGQVFGCHKVEEWNEYFKKGVETKKLVVVDFTASWCGPCRFIAPILADIAKKMP-HVI 68

Query: 62  FLKVDIDELMSIAKEFGVSSVPSFQFLKNGKLVDKFVGAKKNLLQSTISKHSA 115
           FLKVD+DEL +++ E+ V ++P+F F+K+GK VD+ VGAKK  LQ TI KH+A
Sbjct: 69  FLKVDVDELKTVSAEWSVEAMPTFVFIKDGKEVDRVVGAKKEELQQTIVKHAA 120

[Close]

BLAST of IVF0025787 vs. ExPASy TrEMBL
Match: A0A1S3CMJ1 (thioredoxin H-type-like OS=Cucumis melo OX=3656 GN=LOC103502659 PE=4 SV=1)

HSP 1 Score: 232.6 bits (592), Expect = 8.0e-58
Identity = 115/115 (100.00%), Postives = 115/115 (100.00%), Query Frame = 0


Query: 1   MAEMGKVISCHTVSSWKQHLLKAEQYNKLVVVNFTASWCGPCRFMAPILEELAKKMSNNV 60
           MAEMGKVISCHTVSSWKQHLLKAEQYNKLVVVNFTASWCGPCRFMAPILEELAKKMSNNV
Sbjct: 1   MAEMGKVISCHTVSSWKQHLLKAEQYNKLVVVNFTASWCGPCRFMAPILEELAKKMSNNV 60

Query: 61  IFLKVDIDELMSIAKEFGVSSVPSFQFLKNGKLVDKFVGAKKNLLQSTISKHSAK 116
           IFLKVDIDELMSIAKEFGVSSVPSFQFLKNGKLVDKFVGAKKNLLQSTISKHSAK
Sbjct: 61  IFLKVDIDELMSIAKEFGVSSVPSFQFLKNGKLVDKFVGAKKNLLQSTISKHSAK 115

[Close]

BLAST of IVF0025787 vs. ExPASy TrEMBL
Match: A0A0A0KLS7 (Thioredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G190490 PE=4 SV=1)

HSP 1 Score: 224.2 bits (570), Expect = 2.8e-55
Identity = 111/114 (97.37%), Postives = 112/114 (98.25%), Query Frame = 0


Query: 1   MAEMGKVISCHTVSSWKQHLLKAEQYNKLVVVNFTASWCGPCRFMAPILEELAKKMSNNV 60
           MAEMGKVISCHTVSSWKQHLLKAEQ NKLVVVNFTASWCGPCRFMAPILEELAKKMSNNV
Sbjct: 1   MAEMGKVISCHTVSSWKQHLLKAEQCNKLVVVNFTASWCGPCRFMAPILEELAKKMSNNV 60

Query: 61  IFLKVDIDELMSIAKEFGVSSVPSFQFLKNGKLVDKFVGAKKNLLQSTISKHSA 115
           IFLKVDIDELMSIAKEFGVSSVPSFQFLKNGKLVDKFVGAKK LLQ+TISKHSA
Sbjct: 61  IFLKVDIDELMSIAKEFGVSSVPSFQFLKNGKLVDKFVGAKKTLLQNTISKHSA 114

[Close]

BLAST of IVF0025787 vs. ExPASy TrEMBL
Match: A0A5D3DCH1 (Thioredoxin H1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold101G00270 PE=4 SV=1)

HSP 1 Score: 186.8 bits (473), Expect = 5.0e-44
Identity = 85/114 (74.56%), Postives = 101/114 (88.60%), Query Frame = 0


Query: 1   MAEMGKVISCHTVSSWKQHLLKAEQYNKLVVVNFTASWCGPCRFMAPILEELAKKMSNNV 60
           M +MGKV+SCHTV SWKQ LLKA+QYNKLVVVNFTA+WC PCR MAP+L++LA KMSNNV
Sbjct: 1   MNDMGKVVSCHTVGSWKQQLLKAKQYNKLVVVNFTATWCAPCRGMAPVLKDLANKMSNNV 60

Query: 61  IFLKVDIDELMSIAKEFGVSSVPSFQFLKNGKLVDKFVGAKKNLLQSTISKHSA 115
           I LKVD+DELMS+A E+GV ++PSFQF KNGKLVDKFVGA+K++L  T+SKH A
Sbjct: 61  IVLKVDVDELMSVANEYGVGALPSFQFFKNGKLVDKFVGARKDVLHKTVSKHVA 114

[Close]

BLAST of IVF0025787 vs. ExPASy TrEMBL
Match: A0A1S3CMM6 (thioredoxin H1-like OS=Cucumis melo OX=3656 GN=LOC103502660 PE=4 SV=1)

HSP 1 Score: 186.8 bits (473), Expect = 5.0e-44
Identity = 85/114 (74.56%), Postives = 101/114 (88.60%), Query Frame = 0


Query: 1   MAEMGKVISCHTVSSWKQHLLKAEQYNKLVVVNFTASWCGPCRFMAPILEELAKKMSNNV 60
           M +MGKV+SCHTV SWKQ LLKA+QYNKLVVVNFTA+WC PCR MAP+L++LA KMSNNV
Sbjct: 1   MNDMGKVVSCHTVGSWKQQLLKAKQYNKLVVVNFTATWCAPCRGMAPVLKDLANKMSNNV 60

Query: 61  IFLKVDIDELMSIAKEFGVSSVPSFQFLKNGKLVDKFVGAKKNLLQSTISKHSA 115
           I LKVD+DELMS+A E+GV ++PSFQF KNGKLVDKFVGA+K++L  T+SKH A
Sbjct: 61  IVLKVDVDELMSVANEYGVGALPSFQFFKNGKLVDKFVGARKDVLHKTVSKHVA 114

[Close]

BLAST of IVF0025787 vs. ExPASy TrEMBL
Match: A0A5A7U8S0 (Thioredoxin H1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold174G00820 PE=4 SV=1)

HSP 1 Score: 186.0 bits (471), Expect = 8.6e-44
Identity = 109/199 (54.77%), Postives = 112/199 (56.28%), Query Frame = 0


Query: 1   MAEMGKVISCHTVSSWKQHLLKAEQYNKL------------------------------- 60
           M +MGKV+SCHTV SWKQ LLKA+QYNKL                               
Sbjct: 1   MNDMGKVVSCHTVGSWKQQLLKAKQYNKLVVVNFTATWCAPCRGMAPVLKDLANKMSNNV 60

Query: 61  -----------------------------------------------------VVVNFTA 116
                                                                VVVNFTA
Sbjct: 61  IVLKVDVDELMSVANEYGVGALPSFQFFKNGKLVDKFVGARKDVLHKTVSKHVVVVNFTA 120

[Close]

BLAST of IVF0025787 vs. NCBI nr
Match: XP_008464899.1 (PREDICTED: thioredoxin H-type-like [Cucumis melo])

HSP 1 Score: 232 bits (591), Expect = 9.41e-77
Identity = 115/115 (100.00%), Postives = 115/115 (100.00%), Query Frame = 0


Query: 1   MAEMGKVISCHTVSSWKQHLLKAEQYNKLVVVNFTASWCGPCRFMAPILEELAKKMSNNV 60
           MAEMGKVISCHTVSSWKQHLLKAEQYNKLVVVNFTASWCGPCRFMAPILEELAKKMSNNV
Sbjct: 1   MAEMGKVISCHTVSSWKQHLLKAEQYNKLVVVNFTASWCGPCRFMAPILEELAKKMSNNV 60

Query: 61  IFLKVDIDELMSIAKEFGVSSVPSFQFLKNGKLVDKFVGAKKNLLQSTISKHSAK 115
           IFLKVDIDELMSIAKEFGVSSVPSFQFLKNGKLVDKFVGAKKNLLQSTISKHSAK
Sbjct: 61  IFLKVDIDELMSIAKEFGVSSVPSFQFLKNGKLVDKFVGAKKNLLQSTISKHSAK 115

[Close]

BLAST of IVF0025787 vs. NCBI nr
Match: XP_004149944.1 (thioredoxin H-type [Cucumis sativus])

HSP 1 Score: 223 bits (569), Expect = 2.14e-73
Identity = 111/114 (97.37%), Postives = 112/114 (98.25%), Query Frame = 0


Query: 1   MAEMGKVISCHTVSSWKQHLLKAEQYNKLVVVNFTASWCGPCRFMAPILEELAKKMSNNV 60
           MAEMGKVISCHTVSSWKQHLLKAEQ NKLVVVNFTASWCGPCRFMAPILEELAKKMSNNV
Sbjct: 1   MAEMGKVISCHTVSSWKQHLLKAEQCNKLVVVNFTASWCGPCRFMAPILEELAKKMSNNV 60

Query: 61  IFLKVDIDELMSIAKEFGVSSVPSFQFLKNGKLVDKFVGAKKNLLQSTISKHSA 114
           IFLKVDIDELMSIAKEFGVSSVPSFQFLKNGKLVDKFVGAKK LLQ+TISKHSA
Sbjct: 61  IFLKVDIDELMSIAKEFGVSSVPSFQFLKNGKLVDKFVGAKKTLLQNTISKHSA 114

[Close]

BLAST of IVF0025787 vs. NCBI nr
Match: KAE8648009.1 (hypothetical protein Csa_021401 [Cucumis sativus])

HSP 1 Score: 223 bits (569), Expect = 5.20e-73
Identity = 111/114 (97.37%), Postives = 112/114 (98.25%), Query Frame = 0


Query: 1   MAEMGKVISCHTVSSWKQHLLKAEQYNKLVVVNFTASWCGPCRFMAPILEELAKKMSNNV 60
           MAEMGKVISCHTVSSWKQHLLKAEQ NKLVVVNFTASWCGPCRFMAPILEELAKKMSNNV
Sbjct: 28  MAEMGKVISCHTVSSWKQHLLKAEQCNKLVVVNFTASWCGPCRFMAPILEELAKKMSNNV 87

Query: 61  IFLKVDIDELMSIAKEFGVSSVPSFQFLKNGKLVDKFVGAKKNLLQSTISKHSA 114
           IFLKVDIDELMSIAKEFGVSSVPSFQFLKNGKLVDKFVGAKK LLQ+TISKHSA
Sbjct: 88  IFLKVDIDELMSIAKEFGVSSVPSFQFLKNGKLVDKFVGAKKTLLQNTISKHSA 141

[Close]

BLAST of IVF0025787 vs. NCBI nr
Match: XP_038893093.1 (thioredoxin H1-like [Benincasa hispida])

HSP 1 Score: 196 bits (497), Expect = 1.92e-62
Identity = 96/114 (84.21%), Postives = 108/114 (94.74%), Query Frame = 0


Query: 1   MAEMGKVISCHTVSSWKQHLLKAEQYNKLVVVNFTASWCGPCRFMAPILEELAKKMSNNV 60
           MAEMGKVISCHTVSSW Q LLKA+Q NKLVVVNFTA+WCGPCR MAPI+EEL+KKMSN V
Sbjct: 1   MAEMGKVISCHTVSSWNQQLLKAKQCNKLVVVNFTATWCGPCRAMAPIVEELSKKMSN-V 60

Query: 61  IFLKVDIDELMSIAKEFGVSSVPSFQFLKNGKLVDKFVGAKKNLLQSTISKHSA 114
           IFLKVDIDELMSIAKE GVSS+PSFQF+KNGK+VDKFVGAKK+LL+ST++KH+A
Sbjct: 61  IFLKVDIDELMSIAKELGVSSIPSFQFIKNGKVVDKFVGAKKDLLKSTVAKHAA 113

[Close]

BLAST of IVF0025787 vs. NCBI nr
Match: XP_038893273.1 (thioredoxin H1-like [Benincasa hispida])

HSP 1 Score: 187 bits (476), Expect = 3.48e-59
Identity = 87/113 (76.99%), Postives = 102/113 (90.27%), Query Frame = 0


Query: 1   MAEMGKVISCHTVSSWKQHLLKAEQYNKLVVVNFTASWCGPCRFMAPILEELAKKMSNN- 60
           MA+MGKV+SCHTV SWKQ LLKA+QYNKLVVVNFTA+WCGPCR MAP+LE+LA KM NN 
Sbjct: 1   MADMGKVVSCHTVGSWKQQLLKAKQYNKLVVVNFTATWCGPCRTMAPVLEDLASKMRNND 60

Query: 61  VIFLKVDIDELMSIAKEFGVSSVPSFQFLKNGKLVDKFVGAKKNLLQSTISKH 112
           V+FLKVD+DELMS+A E GV ++PSFQF KNGKLVDKFVGA+K++L ST+SKH
Sbjct: 61  VLFLKVDVDELMSVANELGVGALPSFQFFKNGKLVDKFVGARKDVLHSTVSKH 113

[Close]

BLAST of IVF0025787 vs. TAIR 10
Match: AT3G51030.1 (thioredoxin H-type 1 )

HSP 1 Score: 145.2 bits (365), Expect = 3.2e-35
Identity = 67/113 (59.29%), Postives = 89/113 (78.76%), Query Frame = 0


Query: 2   AEMGKVISCHTVSSWKQHLLKAEQYNKLVVVNFTASWCGPCRFMAPILEELAKKMSNNVI 61
           +E G+VI+CHTV +W + L KA +   LVVV+FTASWCGPCRF+AP   +LAKK+  NV+
Sbjct: 3   SEEGQVIACHTVETWNEQLQKANESKTLVVVDFTASWCGPCRFIAPFFADLAKKLP-NVL 62

Query: 62  FLKVDIDELMSIAKEFGVSSVPSFQFLKNGKLVDKFVGAKKNLLQSTISKHSA 115
           FLKVD DEL S+A ++ + ++P+F FLK GK++DK VGAKK+ LQSTI+KH A
Sbjct: 63  FLKVDTDELKSVASDWAIQAMPTFMFLKEGKILDKVVGAKKDELQSTIAKHLA 114

[Close]

BLAST of IVF0025787 vs. TAIR 10
Match: AT1G19730.1 (Thioredoxin superfamily protein )

HSP 1 Score: 139.4 bits (350), Expect = 1.8e-33
Identity = 64/112 (57.14%), Postives = 84/112 (75.00%), Query Frame = 0


Query: 2   AEMGKVISCHTVSSWKQHLLKAEQYNKLVVVNFTASWCGPCRFMAPILEELAKKMSNNVI 61
           AE G+VI CHT   W   L KA++ NKL+V++FTASWC PCR +API  +LAKK  ++ I
Sbjct: 3   AEEGQVIGCHTNDVWTVQLDKAKESNKLIVIDFTASWCPPCRMIAPIFNDLAKKFMSSAI 62

Query: 62  FLKVDIDELMSIAKEFGVSSVPSFQFLKNGKLVDKFVGAKKNLLQSTISKHS 114
           F KVD+DEL S+AKEFGV ++P+F F+K G++VDK VGA K  LQ+ I KH+
Sbjct: 63  FFKVDVDELQSVAKEFGVEAMPTFVFIKAGEVVDKLVGANKEDLQAKIVKHT 114

[Close]

BLAST of IVF0025787 vs. TAIR 10
Match: AT1G45145.1 (thioredoxin H-type 5 )

HSP 1 Score: 126.3 bits (316), Expect = 1.6e-29
Identity = 53/112 (47.32%), Postives = 82/112 (73.21%), Query Frame = 0


Query: 1   MAEMGKVISCHTVSSWKQHLLKAEQYNKLVVVNFTASWCGPCRFMAPILEELAKKMSNNV 60
           MA  G+VI+CHT+  W + +  A +  KL+V++FTASWC PCRF+AP+  E+AKK + NV
Sbjct: 1   MAGEGEVIACHTLEVWNEKVKDANESKKLIVIDFTASWCPPCRFIAPVFAEMAKKFT-NV 60

Query: 61  IFLKVDIDELMSIAKEFGVSSVPSFQFLKNGKLVDKFVGAKKNLLQSTISKH 113
           +F K+D+DEL ++A+EF V ++P+F F+K G ++D+ VGA K+ +   + KH
Sbjct: 61  VFFKIDVDELQAVAQEFKVEAMPTFVFMKEGNIIDRVVGAAKDEINEKLMKH 111

[Close]

BLAST of IVF0025787 vs. TAIR 10
Match: AT5G42980.1 (thioredoxin 3 )

HSP 1 Score: 119.0 bits (297), Expect = 2.5e-27
Identity = 53/112 (47.32%), Postives = 80/112 (71.43%), Query Frame = 0


Query: 1   MAEMGKVISCHTVSSWKQHLLKAEQYNKLVVVNFTASWCGPCRFMAPILEELAKKMSNNV 60
           MA  G+VI+CHTV  W + L  A +  KL+V++FTA+WC PCRF+AP+  +LAKK   +V
Sbjct: 1   MAAEGEVIACHTVEDWTEKLKAANESKKLIVIDFTATWCPPCRFIAPVFADLAKK-HLDV 60

Query: 61  IFLKVDIDELMSIAKEFGVSSVPSFQFLKNGKLVDKFVGAKKNLLQSTISKH 113
           +F KVD+DEL ++A+EF V ++P+F F+K G++ +  VGA K  + + + KH
Sbjct: 61  VFFKVDVDELNTVAEEFKVQAMPTFIFMKEGEIKETVVGAAKEEIIANLEKH 111

[Close]

BLAST of IVF0025787 vs. TAIR 10
Match: AT3G17880.1 (tetraticopeptide domain-containing thioredoxin )

HSP 1 Score: 106.7 bits (265), Expect = 1.3e-23
Identity = 50/110 (45.45%), Postives = 78/110 (70.91%), Query Frame = 0


Query: 5   GKVISCHTVSSWKQHLLKAEQYNKLVVVNFTASWCGPCRFMAPILEELAKKMSNNVIFLK 64
           G+VIS H+ S  +     A++ ++L+++ FTA+WCGPCR+M+P+   LA + S  V+FLK
Sbjct: 270 GEVISIHSTSELEAKTKAAKKASRLLILYFTATWCGPCRYMSPLYSNLATQHS-RVVFLK 329

Query: 65  VDIDELMSIAKEFGVSSVPSFQFLKNGKLVDKFVGAKKNLLQSTISKHSA 115
           VDID+   +A  + +SSVP+F F+++GK VDK VGA K  L+  I++HS+
Sbjct: 330 VDIDKANDVAASWNISSVPTFCFIRDGKEVDKVVGADKGSLEQKIAQHSS 378

The following BLAST results are available for this feature:

BLAST of IVF0025787 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q43636	2.7e-34	61.06	Thioredoxin H-type OS=Ricinus communis OX=3988 PE=3 SV=1	[more]
P29448	4.6e-34	59.29	Thioredoxin H1 OS=Arabidopsis thaliana OX=3702 GN=TRX1 PE=1 SV=1	[more]
Q07090	2.5e-32	59.82	Thioredoxin H-type 2 OS=Nicotiana tabacum OX=4097 PE=3 SV=1	[more]
Q39239	2.5e-32	57.14	Thioredoxin H4 OS=Arabidopsis thaliana OX=3702 GN=TRX4 PE=1 SV=2	[more]
P29449	9.5e-32	56.64	Thioredoxin H-type 1 OS=Nicotiana tabacum OX=4097 PE=2 SV=1	[more]

BLAST of IVF0025787 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CMJ1	8.0e-58	100.00	thioredoxin H-type-like OS=Cucumis melo OX=3656 GN=LOC103502659 PE=4 SV=1	[more]
A0A0A0KLS7	2.8e-55	97.37	Thioredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G190490...	[more]
A0A5D3DCH1	5.0e-44	74.56	Thioredoxin H1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold101G...	[more]
A0A1S3CMM6	5.0e-44	74.56	thioredoxin H1-like OS=Cucumis melo OX=3656 GN=LOC103502660 PE=4 SV=1	[more]
A0A5A7U8S0	8.6e-44	54.77	Thioredoxin H1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold174G...	[more]

BLAST of IVF0025787 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008464899.1	9.41e-77	100.00	PREDICTED: thioredoxin H-type-like [Cucumis melo]	[more]
XP_004149944.1	2.14e-73	97.37	thioredoxin H-type [Cucumis sativus]	[more]
KAE8648009.1	5.20e-73	97.37	hypothetical protein Csa_021401 [Cucumis sativus]	[more]
XP_038893093.1	1.92e-62	84.21	thioredoxin H1-like [Benincasa hispida]	[more]
XP_038893273.1	3.48e-59	76.99	thioredoxin H1-like [Benincasa hispida]	[more]

BLAST of IVF0025787 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G51030.1	3.2e-35	59.29	thioredoxin H-type 1	[more]
AT1G19730.1	1.8e-33	57.14	Thioredoxin superfamily protein	[more]
AT1G45145.1	1.6e-29	47.32	thioredoxin H-type 5	[more]
AT5G42980.1	2.5e-27	47.32	thioredoxin 3	[more]
AT3G17880.1	1.3e-23	45.45	tetraticopeptide domain-containing thioredoxin	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00421	THIOREDOXIN	coord: 38..47 score: 63.11 coord: 78..89 score: 32.45 coord: 30..38 score: 53.46
None	No IPR available	GENE3D	3.40.30.10	Glutaredoxin	coord: 1..115 e-value: 3.1E-38 score: 132.5
None	No IPR available	PANTHER	PTHR10438	THIOREDOXIN	coord: 1..113
None	No IPR available	PANTHER	PTHR10438:SF431	THIOREDOXIN	coord: 1..113
None	No IPR available	CDD	cd02947	TRX_family	coord: 14..100 e-value: 3.9191E-35 score: 114.192
IPR013766	Thioredoxin domain	PFAM	PF00085	Thioredoxin	coord: 10..110 e-value: 5.9E-29 score: 100.1
IPR013766	Thioredoxin domain	PROSITE	PS51352	THIOREDOXIN_2	coord: 1..114 score: 12.826132
IPR017937	Thioredoxin, conserved site	PROSITE	PS00194	THIOREDOXIN_1	coord: 31..49
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 4..113

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0025787.2	IVF0025787.2	mRNA