IVF0024332 (gene) Melon (IVF77) v1

Overview


Name	IVF0024332
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Omega-protein
Location	chr04: 2391945 .. 2398965 (-)
RNA-Seq Expression	IVF0024332
Synteny	IVF0024332

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGGAGCTAGGGATTGGAAGACCTTCCACATATGCAACCACACTAAAAGTTTTAAAGGTTACTTTCTATCATCTCAACTGTTAAATTTGAACTTGTATCTTCATTGTCTTTTTCTGTGTTTGAAATGTCTGAATATGATGGATGATTACATTCTGTCACATTGAGTAGTATCCCGCTCTGGGTTTTATATGTGTGTGTGTAGATATATATCCCACTCAGGGATTGCTTCCTTTCTTTCGTATCAATCATATCAACAAAATCTTGTATCTCACAGAGAAATTATGTTGAGAAATAGCTCAAAATATAAGTATTATGAAAAAAACAGTACTTTTGCTACCATAACTTCAAAATTGAATGTCGAGACTGCTTTCCATTCTTGTACAAAATATGATTCGTTTCATTTCTACCTTTTTAAATTGAAGTGACTGTGAAGATTTCTTAAACTGAACCGTTTTTGCTCTCAACTATGTGTGGGGTGTATGATTTTAGTCGTCTTTGACAAGTATTCGAACGTAGTGGTAGCCTTTGGGTACCCTCATGGCTCCTACCGAATGAAACTAGCATAGAACTGCAATTACATTTTGCAAGTGTTCCTGGAACTTGTTGCTTGGATGCATGTTAAATTTCCTACAAACTGAGGACTTATTTCATACCTTGATTGTGTTGACGGTGTCTTTTGCATGGCATGATATACCTGTTGTGTATTTATTAATCATTTTGTCTATTGCCGTCCAGAGTGATTGATTACATCGTAGTGTAAGGTGATTAAGAACATTACTTGTATCTCTTTTTCAGGTCTGTCTGCAATAATGTCTATGACACTTGTATTGATTCTGACCTGCCTTTTCACAATTTGTTGACAACTAAATGATGATATTTCATATACTTTTAACTATTTGATTTATTTTACTTTCAGGACAGGAAATACGTGTCAGTGAAAAGTCGTGTTCTACATCCAGAGTTTCGTGGGCGCATGGTATGTGTGTAACTCTTAATTACATTGAATTTCCAATTCTTCAAGATTTAATTCCAGTGCTATTTTAAAATCATAGCTGCATATAGGATGTAAAGACTTGCATCTTCTGAACATGTCATTTTTTAACTTTTTGGCTGGCATCATAGAAAGTACAAAGTACGTAAGACAAAATATTATTAAGGAAAAGAATAAAGATTGCACTTGATATTATCTTTCTGCATTATTTAATAGCTGCATTTTCCTAGGTGTGTTTCTCTGAACTCATGGGTTTTTCTTTTTTTGGTTTTTTTTGCTTCAATCAAATACTTATTTCTTGAAACGAGAAAACTTAGTCTCAGCGAATGTCATTGTGATGATTCTAATGAATCTACGACTTTAAAGGCATTTAAGTTTACTGTGAATGGAATTATAATAGGCACTATATATTGATATTCATAATTCCAAGGTATGGGTATGAACAGATGGGGTAAAATCTTTTTTCTTGATTATGTCAACATTCTGTCAACAATAATGTCCATGATATATCCATATACGTTATATGCAGACAGATCTTTGTTTATGTTGATATTTCTGTAATTTCTCAGATTTTCGTTATCTTGGGATTTGGTGTTTTTGTTAAGATACTAAACCTGAAACTCAGAAAGATCTCAATAATAGGGAGAAAACAGAAACAGTACTCAGCAGTTGTATATTAATAAAATGATCCAAGGTTCTCAAACACACAAGAATACAAAGTAACAAGTAACAAAAGCAACACATGATAGAAATAGTAAAAGAACACCCAGCTCTCTTGCATTTCTTCAGCTAAATGTTCCACACTCTTCTTTAGTCCGAGTATGATTTCCTTGAGATCTATAATCTCCCTTTCACTTGATTCCATTCTTTCTTGAAGCTGTTTTTGAGCCATGGAACGTGTCCTCCCCAAGATGAGTGGCTCTAATACCAATTTGTTAAGATCTTTCTAAACTTGAAACTTTGAAAGATCTCAACAATAGGACGAAAACAGAGACAGTACTCTACAGTAGTATATTAATTAAATGATCCAATGTTCTCAAACACACAAGAATACAAAATAACAAGTAATAAAAGAAATAGATGATTGAAATAGTAAAAGAACACCCAGCTCCTTCGAGCATAGCTGGCGACTTCTCCTAAAAGCCTATGATGGCGTCCACCAAAATCAAGACCTTCTTTCCCACCCCTAAAAAACATTTCTTATTTATATACATGTCACCAGTGGGTCTTGAGGTGTTTCTTTCCCTCTCTCCTCGGCTCTCCCTTGGCATATTCTGTGAAGTCCCCTTTCTACCCTTTCTTTAATATGTATGAAGGACTGGAGGCCTATCAGTTTGATAATGTCAACATCCTATCGACAACATTGTCCCTCTCCATTTGAAGAAACCTTTGAAATTTCTACCTGGGGATTTCCTCTTTTTAGGATGTAAGAGATGACAAAGTTTGGCCTTTGGATAATCAAATTTTTTGTATTTATCTGAATGGTGTAGTGATAGTTCCTTTTGATCGAGTCCATTAGTTGGGATTTATTTTGTTGGTTTTCTTCCCACCAACTTTGTCCATGAAAGCGCAATTTTTTATTTAAAAAATTCATATGTGATTCGTTGTTTTTAGTCAAAAAACAATAGTACCGTATCACTGCAAACTGCTTTTACAATGTGCAAATTTTGATGAGTCCTATTATAATTCTAATTTTCCTCTTTCTATCTTTTTAATTTAAGGTATCGGCATTTCTTTCTCATCATTTCTCTGAGGTCACCGATTATAGTTTTACTGCAGACATGGAAAATGAGGTGAGTCGCAATCACAAACTTTCTGTGTTCGCTCACAGTTTGTCTATTGGGTATGGTTGACATCTACAGAAGTTATCTATTACTCAAGCACAGAATACCTCATTACAACATTACCTTTATGGGAAATCTCAAATTTTAACAAATGTTCTACTTTAAAAACCAAATCTACTTTCTTTCTTCAGCTTGATAATGTCTCGGCTGGTTTAACTGAATGGAAAGGCCTCCTAAGAGATTATTGGACCCGGTTCAGCTCATATTTTGAACGTGTTAATAGTGTTCATATTCATCAGGTAACACACCTTTTTGTTTAAGAGGTGGTTTTGGATACAAAAAATGGTGTATTATATAATTAACAGTCTCCTTCGCATCACCAAGAAGGAAACGAGAACAGTTGTAATACTTCATCTGTTTGATATTTCAGGTGGAAAAGATGTTGGAGAAGAAATATGGGGACTTCTTATTTTCTTTTCTTCCTGATAATTCCAGAGCATGTCCAAGGTATGTGTTATGGCTATCTTTCATCCATTTTATCGTCAGGTTTTGGTCTCTTTTAAAAGAACACTATAATGTAGAAAAGGGACTCTTTTGTTGAAAGAAAATTCTCCTATTCATTCAGGAAGAATAGGGAATCGGGGCGTTTAATACTTGAAATGTACTACGCCATCCTGTTGTAAAGAATTGAACACAATATCTTGTTGTCTTTAGTGTCAGTTTGTTGGCCTTTTGTGAGCACTTCTGGATTTTATAATCAATATAAATATAGCAGAGTACTGTCTCTGTTCTTCATCTTTGTTGGGATTTTTCTGAGTTTCAGGGAAGGAGTCTTAACGGCTCCCTTCCTTCATTTGCACGATATCAGTCTAACGCCACATATTCGGAACTGATAGTTAACTTCTTTGCTTTGGTCAATTTGTGAATCTAGAAGTATTGATCTGCCCCAAACAACCAGGAATTCGGATCCATTCCATTGAATATCGGCATTTCAACTTTCTTAAGCTTACTTCTTCCCACTCTCGTTTTTCCCGCTCCTTATTGCAATGCTTCATTCAAAGCCGCTGTCGAATCATCCATTGGCTCCTTCCTTTCTTACTTCCACTGGATTTCTCTACTTCAGTAGTTCCAGATTGATGAAATCTTGTTTGTGCAATCTCGGTCGACACATTCGATAACAGTTGCTTCATCTCTTTAGAACTTCGTTGTTGAATTTCTCCTTGTATATTTAATCGCTCAATGCTTTTTGCTAACATTCCATTGTTTCTTCCATTTTTGGCAACTTCTGAATCTCCACTCCGACTGCCAAGATCCACTTTATTAGCCTCGATCTTCTCTTCCAAACAATTCTTGCGATTTTCGATAAGTTTCCCAGGTTTGAAGCTCTAATGCCAAGATGATTGCCTCTACCCACAACCTCTCCTCTCGAGAAGGTTTCTACACAGGAACTCCCTCCCTCCCTCCTACCTCCCTCCTACCTCCCTCCCTAAAACTTTCTATTTTTATTCATCCATTCTAGTGGTCCCCTCCCTTGACAACTTCTCTCCCCAAAATACCCTTACCTCTCCTATGATATTGATGTATAATTGGGAGTCTAACAGGCTCCCTCAGTAGAAGAAAGATGGAAATCTGAATTAACATTTATTCTTCAATATTTGTTGAATTAAGACAGAATTTTTCATTGAAATAGTGAACAGATACGAATGCTGAAACGATATGAACTCTACAGAGGAGTGAAATAAAACCATAAAAGATAACAAAACTTGGAATTGCAAGGGAACAATATATACATATAACTTCATAAACAGAGCACTTGAAAAATTTCCGACAATAAACTAATCTATGAAGAATAGTTTATGTACTATCCTAGAGTATTGGACTAGCTCCTTGTAACTATTTCTTGATAGGACCTTAGTCAAAACCATTTCACTGATAATAGTTTATCTGCTATCAATGAAATAGTTTTGTTTCCTATCGAACGTGAAGAATAGTGGTCTATAAGTATTCCGTTTCTAAGGATTAGGTTCGTTAACTATTTAAGGGCTTTTCTGTAACCCATTTAGCTGCCAGGGTTTGGTTTTTGCTCCACATTTCATTGATCTAATAAAATGTCTTGGTTCCTCAAAAAGTTAGTTAAGATTGCAGAAATATTCTTGAAAAGGTCAATGGCACAAATTGTGTATTGTCTTTTTTTGCATGTTAAAACTTGTCTCTTCGAAGTATTATGCTAACTTTTAGTTATTTTTCTTTCAGTTGTCAGGAGGGCACTCTGATCTTCAAACTTAGTCGGTTTGGTCCTGGCTATTTCATAGGTTGTGATCAACACCCAAGATGCAAGTAAGTTTGAAATAGGATAACATAGTTATAACTTCTTCACTTTAGTTTGAATGACTTTTTCCTTGTCCTTTCTCCACGCCACCGTTCAGGCATCCAGTGGAGAATTTGTTGCTTTCGCCACTGTCCTTTAAAGTTCATCCAAGTAATATATTCCTAAACAGACTGAATGATACACAACTTTCCTGTTGCCATTAGGCATATTGCAAAAACGTTACATGGTGAGGATGAAGACAATGACAACAGTTTTAAAGAGCCAAAATTGCTTGGTCTTCATCCAGATTTGAACGAAAAGGTTGTCCTTATGGCTCAATTTTTTTCACTCATTTGTTCATTCTATATGATTTTGTTAATTATAAGAATGTTCCCTTTCAGATTCTTTTGAAGAAAGGTCCATTTGGGTTTTATGTACAACTTGGCGAGGACAGGAAAGGGTTCTTGCCCAAAAGAGCCTCTCTTTCCCAGGTATGATGTTTCCTTTTCTATTATCGGATGGATATATATTGAAAGACATTGTTTTGGAATATCTAAAACTTGGTTTACTTCATCCAAATTTCTTAGGAAATTTCTTCTGAAGTTTGTTTTGTTTGTTTTGTTTTTGTTCTTTTTCTCGTTTGATGAAACTGGAATTGCTATTTCTTTTATAATTTTAAATTTATGACCTTGTTGTCTTTCTTTCCTAAGTATGTCAGAATCTTTACCTCATTTACTCTTTTCAGCTTTTACTCTATATATTAGTTGTCAGGTCTAGAGATGTCTGAAACAGGGAAAGAAATTCCATTAAATACACCCAGTTTCTTAATCTTCAAATTTATTTTCAATTACTCTTGTATCCCGAAGCACCTTGAAATTTTGTGCATTGCTTCAAAGTCTTAGGACCTACTGTATGTATAAATCTCCCTTTGCGCCCATAAGGTTTCTTTTCTTTATTTTATTACGAAATTCACCTATTATTTCAGATCAGAATGCAATTTATTTATTTTTGTTAATGTTTGTGAAAATCTATGGGATTCGTTGTCTTTTCATTAGCATAAAATGAACAAAATGATTACATATTCCTTCCATTTTATGTGAGTTGATATTTTTCTCTATATAGACTTATTTGGTTGAGTGCTTGTGTCCACTGAAGAACCAATCTCTTTTGGTACCGATGTACTCAGATTGAACTATAGATACCTATATAATTCCATTCCCGATGAGAAAATTATATCAATTGTCAAATATGTCTGAAGAGTTGGAAAAAAAATTCACTTTATGCTACCCGGAAGCAAGGGTTCTGTCTACGGGATAAAAGTTTATGCAACTCTCTAATTTCTTATGAATTCTGAATCAAGAGTGCATTATTGTGTCTTCCAGATAAAGGACGTGAGTTCTATTACTCTCGAGGATGCTGTTGAACGTTTATGCTACCCGGTTACTTTGGTATATTTACATTCTCTGAACGCATGGTATATTTTCTTTTCATTTTCAATACATTTCTACTCATTTTTGTTGAATACTTCGTGACAGGGAAAACATCCAAAGGATGGCGAACCAGTGATAATAAAGATGGCAAGAGTTGGATTCGCAGTTGGACATCGACGCACGACAGCTTCCATTCCTGAGGTCTTTTTTTTTGTTTCCTCCCATTTTCAGTTTTGCTATCAAATTCCTTAGGGTGGTTAACTCGTAATTTAAAGAGAAAATAATCATCCCTTGTTTTAATTATTTCAAACGAGAAGAATTAAACTAGTTGAAATTAATCCATTTTATTTGTTTTGTTCAAGCTAAGGGTGTAAGTTAAAATTATTTTTGACAGAATCTGAAGCCAAACGACATCGATTTAGCGAAAGCGTTGGAGCTTCTGTCTAGTAGCAGTATTAGGAGGTCTGGGCGATCTAAAAGCAACCCCAAGGTTGCAAGCTGTTGA

mRNA sequence

ATGGAGGAGCTAGGGATTGGAAGACCTTCCACATATGCAACCACACTAAAAGTTTTAAAGGACAGGAAATACGTGTCAGTGAAAAGTCGTGTTCTACATCCAGAGTTTCGTGGGCGCATGGTATCGGCATTTCTTTCTCATCATTTCTCTGAGGTCACCGATTATAGTTTTACTGCAGACATGGAAAATGAGCTTGATAATGTCTCGGCTGGTTTAACTGAATGGAAAGGCCTCCTAAGAGATTATTGGACCCGGTTCAGCTCATATTTTGAACGTGTTAATAGTGTTCATATTCATCAGGTGGAAAAGATGTTGGAGAAGAAATATGGGGACTTCTTATTTTCTTTTCTTCCTGATAATTCCAGAGCATGTCCAAGTTGTCAGGAGGGCACTCTGATCTTCAAACTTAGTCGGTTTGGTCCTGGCTATTTCATAGGTTGTGATCAACACCCAAGATGCAAGCATATTGCAAAAACGTTACATGGTGAGGATGAAGACAATGACAACAGTTTTAAAGAGCCAAAATTGCTTGGTCTTCATCCAGATTTGAACGAAAAGATTCTTTTGAAGAAAGGTCCATTTGGGTTTTATGTACAACTTGGCGAGGACAGGAAAGGGTTCTTGCCCAAAAGAGCCTCTCTTTCCCAGATAAAGGACGTGAGTTCTATTACTCTCGAGGATGCTGTTGAACGTTTATGCTACCCGGTTACTTTGGGAAAACATCCAAAGGATGGCGAACCAGTGATAATAAAGATGGCAAGAGTTGGATTCGCAGTTGGACATCGACGCACGACAGCTTCCATTCCTGAGAATCTGAAGCCAAACGACATCGATTTAGCGAAAGCGTTGGAGCTTCTGTCTAGTAGCAGTATTAGGAGGTCTGGGCGATCTAAAAGCAACCCCAAGGTTGCAAGCTGTTGA

Coding sequence (CDS)

ATGGAGGAGCTAGGGATTGGAAGACCTTCCACATATGCAACCACACTAAAAGTTTTAAAGGACAGGAAATACGTGTCAGTGAAAAGTCGTGTTCTACATCCAGAGTTTCGTGGGCGCATGGTATCGGCATTTCTTTCTCATCATTTCTCTGAGGTCACCGATTATAGTTTTACTGCAGACATGGAAAATGAGCTTGATAATGTCTCGGCTGGTTTAACTGAATGGAAAGGCCTCCTAAGAGATTATTGGACCCGGTTCAGCTCATATTTTGAACGTGTTAATAGTGTTCATATTCATCAGGTGGAAAAGATGTTGGAGAAGAAATATGGGGACTTCTTATTTTCTTTTCTTCCTGATAATTCCAGAGCATGTCCAAGTTGTCAGGAGGGCACTCTGATCTTCAAACTTAGTCGGTTTGGTCCTGGCTATTTCATAGGTTGTGATCAACACCCAAGATGCAAGCATATTGCAAAAACGTTACATGGTGAGGATGAAGACAATGACAACAGTTTTAAAGAGCCAAAATTGCTTGGTCTTCATCCAGATTTGAACGAAAAGATTCTTTTGAAGAAAGGTCCATTTGGGTTTTATGTACAACTTGGCGAGGACAGGAAAGGGTTCTTGCCCAAAAGAGCCTCTCTTTCCCAGATAAAGGACGTGAGTTCTATTACTCTCGAGGATGCTGTTGAACGTTTATGCTACCCGGTTACTTTGGGAAAACATCCAAAGGATGGCGAACCAGTGATAATAAAGATGGCAAGAGTTGGATTCGCAGTTGGACATCGACGCACGACAGCTTCCATTCCTGAGAATCTGAAGCCAAACGACATCGATTTAGCGAAAGCGTTGGAGCTTCTGTCTAGTAGCAGTATTAGGAGGTCTGGGCGATCTAAAAGCAACCCCAAGGTTGCAAGCTGTTGA

Protein sequence

MEELGIGRPSTYATTLKVLKDRKYVSVKSRVLHPEFRGRMVSAFLSHHFSEVTDYSFTADMENELDNVSAGLTEWKGLLRDYWTRFSSYFERVNSVHIHQVEKMLEKKYGDFLFSFLPDNSRACPSCQEGTLIFKLSRFGPGYFIGCDQHPRCKHIAKTLHGEDEDNDNSFKEPKLLGLHPDLNEKILLKKGPFGFYVQLGEDRKGFLPKRASLSQIKDVSSITLEDAVERLCYPVTLGKHPKDGEPVIIKMARVGFAVGHRRTTASIPENLKPNDIDLAKALELLSSSSIRRSGRSKSNPKVASC

Homology

[Close]

BLAST of IVF0024332 vs. ExPASy Swiss-Prot
Match: Q4UM42 (DNA topoisomerase 1 OS=Rickettsia felis (strain ATCC VR-1525 / URRWXCal2) OX=315456 GN=topA PE=3 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 1.1e-50
Identity = 114/297 (38.38%), Postives = 167/297 (56.23%), Query Frame = 0


Query: 1   MEELGIGRPSTYATTLKVLKDRKYVSVKSRVLHPEFRGRMVSAFLSHHFSEVTDYSFTAD 60
           +EELGIGRPSTYA+ L VL+DRKYVS++ +   PE  GR+V+ FL   F +  +Y FTA 
Sbjct: 478 LEELGIGRPSTYASILSVLQDRKYVSLEKKRFMPEELGRLVTVFLVGFFKKYVEYDFTAG 537

Query: 61  MENELDNVSAGLTEWKGLLRDYWTRFSSYFERVNSVHIHQVEKMLEKKYGDFLFSFLPDN 120
           +ENELD ++AG  EWK  L ++W+ F+   E VN   I ++   ++K     LFS   + 
Sbjct: 538 LENELDEIAAGKLEWKAALNNFWSGFNHNIESVNEQKITEIISYVQKALDYHLFSENKE- 597

Query: 121 SRACPSCQEGTLIFKLSRFGPGYFIGCDQHPRCKHIAKTLHGED-EDNDNSF----KEPK 180
           S+ACPSC+ G L  KL +FG   F+ C  +P C      + G D  +ND        E K
Sbjct: 598 SKACPSCKTGELSLKLGKFGA--FLACSNYPECTFRKSIVSGNDNNENDGDLAATPNENK 657

Query: 181 LLGLHPDLNEKILLKKGPFGFYVQLGEDRKGFLPKRASLSQIKDVSSITLEDAVERLCYP 240
           +LG   D   +I LKKGP+G YVQLGE      PKR+ +    + + ITLE A++ L  P
Sbjct: 658 VLGTDKD-GIEIYLKKGPYGPYVQLGEQEGKVKPKRSPVPASLNQNDITLEMALKLLSLP 717

Query: 241 VTLGKHPKDGEPVIIKMARVGFAVGHRRTTASIPENLKPNDIDLAKALELLSSSSIR 293
           + +G H   GE ++I   + G  + +     SIP+     ++ L  A++L+  +  +
Sbjct: 718 LKIGIHKDSGEEIMIGYGKFGPYIKYMGKFISIPKKYDFLNLSLDDAMKLIEDNKAK 770

[Close]

BLAST of IVF0024332 vs. ExPASy Swiss-Prot
Match: Q9ZDK2 (DNA topoisomerase 1 OS=Rickettsia prowazekii (strain Madrid E) OX=272947 GN=topA PE=3 SV=1)

HSP 1 Score: 196.8 bits (499), Expect = 3.5e-49
Identity = 110/297 (37.04%), Postives = 162/297 (54.55%), Query Frame = 0


Query: 1   MEELGIGRPSTYATTLKVLKDRKYVSVKSRVLHPEFRGRMVSAFLSHHFSEVTDYSFTAD 60
           +EELGIGRPSTYA+ L VL+DRKYV+++ +   PE  GR+V+ FL   F +  +Y FTA 
Sbjct: 478 LEELGIGRPSTYASILSVLQDRKYVALEKKRFIPEELGRLVTVFLVGFFKKYVEYDFTAG 537

Query: 61  MENELDNVSAGLTEWKGLLRDYWTRFSSYFERVNSVHIHQVEKMLEKKYGDFLFSFLPDN 120
           +ENELD ++AG  EWK  L ++W  F+   E VN   I ++   L+K     LF      
Sbjct: 538 LENELDEIAAGKLEWKTALNNFWRGFNHNIESVNEQKITEIINYLQKALDYHLFG-EDKE 597

Query: 121 SRACPSCQEGTLIFKLSRFGPGYFIGCDQHPRCKHIAKTLHGEDEDNDNS-----FKEPK 180
           S+ CPSC+ G L  KL +FG   F+ C  +P C      + G D + D         + K
Sbjct: 598 SKVCPSCKTGQLSLKLGKFGA--FLACSNYPECTFKKSIVSGNDNNEDEGDPSTILNDNK 657

Query: 181 LLGLHPDLNEKILLKKGPFGFYVQLGEDRKGFLPKRASLSQIKDVSSITLEDAVERLCYP 240
           +LG   D   +I LKKGP+G Y+QLGE      PKR  +      S ITLE A++ L  P
Sbjct: 658 ILGTDQD-GVEIYLKKGPYGPYIQLGEQCGKVKPKRTPVPANLKQSEITLEIALKLLNLP 717

Query: 241 VTLGKHPKDGEPVIIKMARVGFAVGHRRTTASIPENLKPNDIDLAKALELLSSSSIR 293
           + +G H   GE +II  ++ G  + +     S+P+     ++ L  A++L+ ++  +
Sbjct: 718 LKIGIHKDSGEEIIIGYSKFGPYIKYMCKFISVPKKYDFLNLSLNDAMKLIQNNKAK 770

[Close]

BLAST of IVF0024332 vs. ExPASy Swiss-Prot
Match: Q68X45 (DNA topoisomerase 1 OS=Rickettsia typhi (strain ATCC VR-144 / Wilmington) OX=257363 GN=topA PE=3 SV=1)

HSP 1 Score: 196.4 bits (498), Expect = 4.6e-49
Identity = 110/304 (36.18%), Postives = 168/304 (55.26%), Query Frame = 0


Query: 1   MEELGIGRPSTYATTLKVLKDRKYVSVKSRVLHPEFRGRMVSAFLSHHFSEVTDYSFTAD 60
           +EELGIGRPSTYA+ L VL+DRKYV+++ +   PE  GR+V+ FL   F +  +Y FTA 
Sbjct: 478 LEELGIGRPSTYASILSVLQDRKYVTLEKKRFIPEELGRLVTVFLVGFFKKYVEYDFTAG 537

Query: 61  MENELDNVSAGLTEWKGLLRDYWTRFSSYFERVNSVHIHQVEKMLEKKYGDFLFSFLPDN 120
           +ENELD ++AG  EWK  L ++W+ F++  E VN   I ++   L+K     LF    + 
Sbjct: 538 LENELDEIAAGKLEWKTSLNNFWSGFNNNIESVNEQKITEIINYLQKALDYHLFGENKE- 597

Query: 121 SRACPSCQEGTLIFKLSRFGPGYFIGCDQHPRCKHIAKTLHGEDEDNDNS-----FKEPK 180
           S+ CPSC+ G L  KL +FG   F+ C  +P C      + G D + D         + K
Sbjct: 598 SKVCPSCKTGQLSLKLGKFGA--FLACSNYPECTFKKSIVSGNDNNEDEGNLSTILNDNK 657

Query: 181 LLGLHPDLNEKILLKKGPFGFYVQLGEDRKGFLPKRASLSQIKDVSSITLEDAVERLCYP 240
           +LG   D   +I LK GP+G Y+QLGE      PKR  +      S ITLE A++ L  P
Sbjct: 658 ILGTDKD-GVEIYLKTGPYGPYIQLGEQCGKVKPKRTPVPTNLKQSEITLEVALKLLSLP 717

Query: 241 VTLGKHPKDGEPVIIKMARVGFAVGHRRTTASIPENLKPNDIDLAKALELLSSSSIRRSG 300
           + +G H   GE +II  ++ G  + +     S+P+     +++L  A++L+ ++  +   
Sbjct: 718 LKIGIHKDSGEEIIIGYSKFGPYIKYMCKFISVPKKYDFLNLNLDDAIKLIENNKAKLEK 777

[Close]

BLAST of IVF0024332 vs. ExPASy Swiss-Prot
Match: Q1RIM1 (DNA topoisomerase 1 OS=Rickettsia bellii (strain RML369-C) OX=336407 GN=topA PE=3 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 4.3e-47
Identity = 108/293 (36.86%), Postives = 164/293 (55.97%), Query Frame = 0


Query: 1   MEELGIGRPSTYATTLKVLKDRKYVSVKSRVLHPEFRGRMVSAFLSHHFSEVTDYSFTAD 60
           +EELGIGRPSTYAT L VL+DRKYV+++ +   PE  GR+V+ FL   F +  +Y FTA 
Sbjct: 478 LEELGIGRPSTYATILSVLQDRKYVTLEKKRFIPEELGRLVTVFLVGFFKKYVEYDFTAG 537

Query: 61  MENELDNVSAGLTEWKGLLRDYWTRFSSYFERVNSVHIHQVEKMLEKKYGDFLFSFLPDN 120
           +ENELD ++AG  EWK  L ++W  F+   E VN  +I ++   +++     +F    D 
Sbjct: 538 LENELDEIAAGKLEWKSALGNFWNGFNHNIESVNKQNITEIISYVQQALDYHIFGENKD- 597

Query: 121 SRACPSCQEGTLIFKLSRFGPGYFIGCDQHPRCKHIAKTLHGEDEDNDNS-----FKEPK 180
           S+ CPSC+ G L  KL +FG   F+ C  +P C      + G D +  +        E K
Sbjct: 598 SKVCPSCKTGELSLKLGKFGA--FLACSNYPECNFRKSIVSGNDNNEADGEAKDIVNENK 657

Query: 181 LLGLHPDLNEKILLKKGPFGFYVQLGE--DRKGFLPKRASLSQIKDVSSITLEDAVERLC 240
           +LG   +   +I LKKGP+G Y+Q GE  D K   PKR+ L    + + ITL+ A++ L 
Sbjct: 658 VLGKDKE-GIEIYLKKGPYGPYIQYGEQVDSK-IKPKRSPLPAGLNQNDITLDMALKLLS 717

Query: 241 YPVTLGKHPKDGEPVIIKMARVGFAVGHRRTTASIPENLKPNDIDLAKALELL 287
            P+ +G H + GE V++   + G  + +     SIP+     ++ L  A++L+
Sbjct: 718 LPLKIGNHKESGEEVLVGYGKFGPYIKYMGKFISIPKKYDFLNLSLDDAMKLI 765

[Close]

BLAST of IVF0024332 vs. ExPASy Swiss-Prot
Match: Q92IH1 (DNA topoisomerase 1 OS=Rickettsia conorii (strain ATCC VR-613 / Malish 7) OX=272944 GN=topA PE=3 SV=1)

HSP 1 Score: 185.7 bits (470), Expect = 8.1e-46
Identity = 105/298 (35.23%), Postives = 164/298 (55.03%), Query Frame = 0


Query: 1   MEELGIGRPSTYATTLKVLKDRKYVSVKSRVLHPEFRGRMVSAFLSHHFSEVTDYSFTAD 60
           +EELGIGRPSTYA+ L VL+DRKYV+++ +   PE  GR+V+ FL   F +  +Y FTA 
Sbjct: 478 LEELGIGRPSTYASILSVLQDRKYVALEKKRFIPEELGRLVTVFLVGFFKKYVEYDFTAG 537

Query: 61  MENELDNVSAGLTEWKGLLRDYWTRFSSYFERVNSVHIHQVEKMLEKKYGDFLFSFLPDN 120
           +ENELD ++AG  EWK  L ++W+ F+   E VN   I ++   ++K     LF    + 
Sbjct: 538 LENELDAIAAGKLEWKAALNNFWSGFNHNIESVNEQKITEIISYVQKALDYHLFGENKE- 597

Query: 121 SRACPSCQEGTLIFKLSRFGPGYFIGCDQHPRCKHIAKTLHGEDEDNDNSFK------EP 180
           S+ CPSC  G L  KL +FG   F+ C  +P C      + G D +N+N  +      E 
Sbjct: 598 SKICPSCNTGELSLKLGKFGA--FLACSNYPECTFRKSIVSGND-NNENEGEPAAMPNEN 657

Query: 181 KLLGLHPDLNEKILLKKGPFGFYVQLGEDRKGFLPKRASLSQIKDVSSITLEDAVERLCY 240
           K+LG   D   +I LKKGP+G Y+QLG+      PKR+ +    + + ITL+ A++ L  
Sbjct: 658 KVLGTDKD-GVEIYLKKGPYGPYIQLGKQEGKVKPKRSPVPASLNQNDITLDIALKLLSL 717

Query: 241 PVTLGKHPKDGEPVIIKMARVGFAVGHRRTTASIPENLKPNDIDLAKALELLSSSSIR 293
           P+ +G H    E ++I   + G  + +     S+ +     ++ L  A++L+  +  +
Sbjct: 718 PLKIGIHKDSDEEIMIGYGKFGPYIKYMGQFISVQKKYDFLNLSLDDAMKLIEENKAK 770

[Close]

BLAST of IVF0024332 vs. ExPASy TrEMBL
Match: A0A5A7TAX8 (Omega-protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G006510 PE=3 SV=1)

HSP 1 Score: 629.0 bits (1621), Expect = 1.0e-176
Identity = 306/306 (100.00%), Postives = 306/306 (100.00%), Query Frame = 0


Query: 1    MEELGIGRPSTYATTLKVLKDRKYVSVKSRVLHPEFRGRMVSAFLSHHFSEVTDYSFTAD 60
            MEELGIGRPSTYATTLKVLKDRKYVSVKSRVLHPEFRGRMVSAFLSHHFSEVTDYSFTAD
Sbjct: 784  MEELGIGRPSTYATTLKVLKDRKYVSVKSRVLHPEFRGRMVSAFLSHHFSEVTDYSFTAD 843

Query: 61   MENELDNVSAGLTEWKGLLRDYWTRFSSYFERVNSVHIHQVEKMLEKKYGDFLFSFLPDN 120
            MENELDNVSAGLTEWKGLLRDYWTRFSSYFERVNSVHIHQVEKMLEKKYGDFLFSFLPDN
Sbjct: 844  MENELDNVSAGLTEWKGLLRDYWTRFSSYFERVNSVHIHQVEKMLEKKYGDFLFSFLPDN 903

Query: 121  SRACPSCQEGTLIFKLSRFGPGYFIGCDQHPRCKHIAKTLHGEDEDNDNSFKEPKLLGLH 180
            SRACPSCQEGTLIFKLSRFGPGYFIGCDQHPRCKHIAKTLHGEDEDNDNSFKEPKLLGLH
Sbjct: 904  SRACPSCQEGTLIFKLSRFGPGYFIGCDQHPRCKHIAKTLHGEDEDNDNSFKEPKLLGLH 963

Query: 181  PDLNEKILLKKGPFGFYVQLGEDRKGFLPKRASLSQIKDVSSITLEDAVERLCYPVTLGK 240
            PDLNEKILLKKGPFGFYVQLGEDRKGFLPKRASLSQIKDVSSITLEDAVERLCYPVTLGK
Sbjct: 964  PDLNEKILLKKGPFGFYVQLGEDRKGFLPKRASLSQIKDVSSITLEDAVERLCYPVTLGK 1023

Query: 241  HPKDGEPVIIKMARVGFAVGHRRTTASIPENLKPNDIDLAKALELLSSSSIRRSGRSKSN 300
            HPKDGEPVIIKMARVGFAVGHRRTTASIPENLKPNDIDLAKALELLSSSSIRRSGRSKSN
Sbjct: 1024 HPKDGEPVIIKMARVGFAVGHRRTTASIPENLKPNDIDLAKALELLSSSSIRRSGRSKSN 1083

Query: 301  PKVASC 307
            PKVASC
Sbjct: 1084 PKVASC 1089

[Close]

BLAST of IVF0024332 vs. ExPASy TrEMBL
Match: A0A1S4E5M8 (Omega-protein OS=Cucumis melo OX=3656 GN=LOC103503742 PE=3 SV=1)

HSP 1 Score: 629.0 bits (1621), Expect = 1.0e-176
Identity = 306/306 (100.00%), Postives = 306/306 (100.00%), Query Frame = 0


Query: 1    MEELGIGRPSTYATTLKVLKDRKYVSVKSRVLHPEFRGRMVSAFLSHHFSEVTDYSFTAD 60
            MEELGIGRPSTYATTLKVLKDRKYVSVKSRVLHPEFRGRMVSAFLSHHFSEVTDYSFTAD
Sbjct: 910  MEELGIGRPSTYATTLKVLKDRKYVSVKSRVLHPEFRGRMVSAFLSHHFSEVTDYSFTAD 969

Query: 61   MENELDNVSAGLTEWKGLLRDYWTRFSSYFERVNSVHIHQVEKMLEKKYGDFLFSFLPDN 120
            MENELDNVSAGLTEWKGLLRDYWTRFSSYFERVNSVHIHQVEKMLEKKYGDFLFSFLPDN
Sbjct: 970  MENELDNVSAGLTEWKGLLRDYWTRFSSYFERVNSVHIHQVEKMLEKKYGDFLFSFLPDN 1029

Query: 121  SRACPSCQEGTLIFKLSRFGPGYFIGCDQHPRCKHIAKTLHGEDEDNDNSFKEPKLLGLH 180
            SRACPSCQEGTLIFKLSRFGPGYFIGCDQHPRCKHIAKTLHGEDEDNDNSFKEPKLLGLH
Sbjct: 1030 SRACPSCQEGTLIFKLSRFGPGYFIGCDQHPRCKHIAKTLHGEDEDNDNSFKEPKLLGLH 1089

Query: 181  PDLNEKILLKKGPFGFYVQLGEDRKGFLPKRASLSQIKDVSSITLEDAVERLCYPVTLGK 240
            PDLNEKILLKKGPFGFYVQLGEDRKGFLPKRASLSQIKDVSSITLEDAVERLCYPVTLGK
Sbjct: 1090 PDLNEKILLKKGPFGFYVQLGEDRKGFLPKRASLSQIKDVSSITLEDAVERLCYPVTLGK 1149

Query: 241  HPKDGEPVIIKMARVGFAVGHRRTTASIPENLKPNDIDLAKALELLSSSSIRRSGRSKSN 300
            HPKDGEPVIIKMARVGFAVGHRRTTASIPENLKPNDIDLAKALELLSSSSIRRSGRSKSN
Sbjct: 1150 HPKDGEPVIIKMARVGFAVGHRRTTASIPENLKPNDIDLAKALELLSSSSIRRSGRSKSN 1209

Query: 301  PKVASC 307
            PKVASC
Sbjct: 1210 PKVASC 1215

[Close]

BLAST of IVF0024332 vs. ExPASy TrEMBL
Match: A0A6J1CSY4 (Omega-protein OS=Momordica charantia OX=3673 GN=LOC111013976 PE=3 SV=1)

HSP 1 Score: 519.2 bits (1336), Expect = 1.1e-143
Identity = 252/307 (82.08%), Postives = 274/307 (89.25%), Query Frame = 0


Query: 1    MEELGIGRPSTYATTLKVLKDRKYVSVKSRVLHPEFRGRMVSAFLSHHFSEVTDYSFTAD 60
            MEELGIGRPSTYATTLKVL+DR YVSVKSRVLHPEFRGRMVSAFL HHFSEVTDYSFTAD
Sbjct: 847  MEELGIGRPSTYATTLKVLQDRNYVSVKSRVLHPEFRGRMVSAFLCHHFSEVTDYSFTAD 906

Query: 61   MENELDNVSAGLTEWKGLLRDYWTRFSSYFERVNSVHIHQVEKMLEKKYGDFLFSFLPDN 120
            ME ELDNVSAGLTEWKGLLRDYWTRFSSY E  NSVHIHQVEKMLEKK+GDFLFSFLPDN
Sbjct: 907  METELDNVSAGLTEWKGLLRDYWTRFSSYCELANSVHIHQVEKMLEKKFGDFLFSFLPDN 966

Query: 121  SRACPSCQEGTLIFKLSRFGPGYFIGCDQHPRCKHIAKTLHGEDED----NDNSFKEPKL 180
             R CPSC EGTLIFK+SRFG GYFIGCDQHP+CK+IAKTL+GEDE+    N+NS +EPKL
Sbjct: 967  CRTCPSCLEGTLIFKVSRFGAGYFIGCDQHPKCKYIAKTLYGEDEEVTPQNNNSVEEPKL 1026

Query: 181  LGLHPDLNEKILLKKGPFGFYVQLGEDRKGFLPKRASLSQIKDVSSITLEDAVERLCYPV 240
            LGLHP  NEKILLK GP+GFYVQLGEDRKG+LPKRAS+SQIK V SITLEDA+E L YP+
Sbjct: 1027 LGLHPVSNEKILLKSGPYGFYVQLGEDRKGYLPKRASVSQIKHVDSITLEDALELLRYPI 1086

Query: 241  TLGKHPKDGEPVIIKMARVGFAVGHRRTTASIPENLKPNDIDLAKALELLSSSSIRRSGR 300
            TLG HPKDG+PVIIK+A+ GF+V HRRT A+IP+NLKPN I L KALELLSS+ +RR GR
Sbjct: 1087 TLGNHPKDGQPVIIKIAKAGFSVRHRRTIATIPKNLKPNGITLEKALELLSSNDVRRCGR 1146

Query: 301  SKSNPKV 304
             KS PKV
Sbjct: 1147 PKSKPKV 1153

[Close]

BLAST of IVF0024332 vs. ExPASy TrEMBL
Match: A0A6J1IF86 (Omega-protein OS=Cucurbita maxima OX=3661 GN=LOC111476696 PE=3 SV=1)

HSP 1 Score: 513.8 bits (1322), Expect = 4.8e-142
Identity = 246/308 (79.87%), Postives = 272/308 (88.31%), Query Frame = 0


Query: 1    MEELGIGRPSTYATTLKVLKDRKYVSVKSRVLHPEFRGRMVSAFLSHHFSEVTDYSFTAD 60
            MEELGIGRPSTYA+TLKVL+DR Y+SVKSRVLHPEFRGRMVSAFL HHFSEVTDYSFTAD
Sbjct: 848  MEELGIGRPSTYASTLKVLQDRNYLSVKSRVLHPEFRGRMVSAFLCHHFSEVTDYSFTAD 907

Query: 61   MENELDNVSAGLTEWKGLLRDYWTRFSSYFERVNSVHIHQVEKMLEKKYGDFLFSFLPDN 120
            MENELDNVSAGLTEWKGLLRDYWTRFS+Y ER N+VHIHQVEKMLEKKY DFLFSFLPDN
Sbjct: 908  MENELDNVSAGLTEWKGLLRDYWTRFSTYCERANNVHIHQVEKMLEKKYEDFLFSFLPDN 967

Query: 121  SRACPSCQEGTLIFKLSRFGPGYFIGCDQHPRCKHIAKTLHGEDED-----NDNSFKEPK 180
             R CPSC EGTLIFK+SR+G GYFIGCDQHPRCK+IAKTL+GEDE+     N+ S +EPK
Sbjct: 968  CRTCPSCLEGTLIFKVSRYGAGYFIGCDQHPRCKYIAKTLYGEDEEEVTPQNNQSVEEPK 1027

Query: 181  LLGLHPDLNEKILLKKGPFGFYVQLGEDRKGFLPKRASLSQIKDVSSITLEDAVERLCYP 240
            LLGLHP  +EKILLK GP+GFYVQLGEDRKG++PKR S+SQIKDV SITLEDA+E L YP
Sbjct: 1028 LLGLHPVSSEKILLKSGPYGFYVQLGEDRKGYMPKRTSVSQIKDVGSITLEDALELLRYP 1087

Query: 241  VTLGKHPKDGEPVIIKMARVGFAVGHRRTTASIPENLKPNDIDLAKALELLSSSSIRRSG 300
            +TLG HPKDG  V+IK+ + GF V HRRT AS+P+NLKPND+DLAKALELLSS  +RR G
Sbjct: 1088 ITLGNHPKDGHRVLIKITKAGFTVRHRRTIASVPKNLKPNDVDLAKALELLSSKDVRRCG 1147

Query: 301  RSKSNPKV 304
            R KS PKV
Sbjct: 1148 RPKSKPKV 1155

[Close]

BLAST of IVF0024332 vs. ExPASy TrEMBL
Match: A0A6J1IMZ7 (Omega-protein OS=Cucurbita maxima OX=3661 GN=LOC111476696 PE=3 SV=1)

HSP 1 Score: 513.8 bits (1322), Expect = 4.8e-142
Identity = 246/308 (79.87%), Postives = 272/308 (88.31%), Query Frame = 0


Query: 1    MEELGIGRPSTYATTLKVLKDRKYVSVKSRVLHPEFRGRMVSAFLSHHFSEVTDYSFTAD 60
            MEELGIGRPSTYA+TLKVL+DR Y+SVKSRVLHPEFRGRMVSAFL HHFSEVTDYSFTAD
Sbjct: 818  MEELGIGRPSTYASTLKVLQDRNYLSVKSRVLHPEFRGRMVSAFLCHHFSEVTDYSFTAD 877

Query: 61   MENELDNVSAGLTEWKGLLRDYWTRFSSYFERVNSVHIHQVEKMLEKKYGDFLFSFLPDN 120
            MENELDNVSAGLTEWKGLLRDYWTRFS+Y ER N+VHIHQVEKMLEKKY DFLFSFLPDN
Sbjct: 878  MENELDNVSAGLTEWKGLLRDYWTRFSTYCERANNVHIHQVEKMLEKKYEDFLFSFLPDN 937

Query: 121  SRACPSCQEGTLIFKLSRFGPGYFIGCDQHPRCKHIAKTLHGEDED-----NDNSFKEPK 180
             R CPSC EGTLIFK+SR+G GYFIGCDQHPRCK+IAKTL+GEDE+     N+ S +EPK
Sbjct: 938  CRTCPSCLEGTLIFKVSRYGAGYFIGCDQHPRCKYIAKTLYGEDEEEVTPQNNQSVEEPK 997

Query: 181  LLGLHPDLNEKILLKKGPFGFYVQLGEDRKGFLPKRASLSQIKDVSSITLEDAVERLCYP 240
            LLGLHP  +EKILLK GP+GFYVQLGEDRKG++PKR S+SQIKDV SITLEDA+E L YP
Sbjct: 998  LLGLHPVSSEKILLKSGPYGFYVQLGEDRKGYMPKRTSVSQIKDVGSITLEDALELLRYP 1057

Query: 241  VTLGKHPKDGEPVIIKMARVGFAVGHRRTTASIPENLKPNDIDLAKALELLSSSSIRRSG 300
            +TLG HPKDG  V+IK+ + GF V HRRT AS+P+NLKPND+DLAKALELLSS  +RR G
Sbjct: 1058 ITLGNHPKDGHRVLIKITKAGFTVRHRRTIASVPKNLKPNDVDLAKALELLSSKDVRRCG 1117

Query: 301  RSKSNPKV 304
            R KS PKV
Sbjct: 1118 RPKSKPKV 1125

[Close]

BLAST of IVF0024332 vs. NCBI nr
Match: KAA0038737.1 (DNA topoisomerase 1 isoform X2 [Cucumis melo var. makuwa] >TYK31350.1 DNA topoisomerase 1 isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 624 bits (1610), Expect = 1.81e-214
Identity = 306/306 (100.00%), Postives = 306/306 (100.00%), Query Frame = 0


Query: 1    MEELGIGRPSTYATTLKVLKDRKYVSVKSRVLHPEFRGRMVSAFLSHHFSEVTDYSFTAD 60
            MEELGIGRPSTYATTLKVLKDRKYVSVKSRVLHPEFRGRMVSAFLSHHFSEVTDYSFTAD
Sbjct: 784  MEELGIGRPSTYATTLKVLKDRKYVSVKSRVLHPEFRGRMVSAFLSHHFSEVTDYSFTAD 843

Query: 61   MENELDNVSAGLTEWKGLLRDYWTRFSSYFERVNSVHIHQVEKMLEKKYGDFLFSFLPDN 120
            MENELDNVSAGLTEWKGLLRDYWTRFSSYFERVNSVHIHQVEKMLEKKYGDFLFSFLPDN
Sbjct: 844  MENELDNVSAGLTEWKGLLRDYWTRFSSYFERVNSVHIHQVEKMLEKKYGDFLFSFLPDN 903

Query: 121  SRACPSCQEGTLIFKLSRFGPGYFIGCDQHPRCKHIAKTLHGEDEDNDNSFKEPKLLGLH 180
            SRACPSCQEGTLIFKLSRFGPGYFIGCDQHPRCKHIAKTLHGEDEDNDNSFKEPKLLGLH
Sbjct: 904  SRACPSCQEGTLIFKLSRFGPGYFIGCDQHPRCKHIAKTLHGEDEDNDNSFKEPKLLGLH 963

Query: 181  PDLNEKILLKKGPFGFYVQLGEDRKGFLPKRASLSQIKDVSSITLEDAVERLCYPVTLGK 240
            PDLNEKILLKKGPFGFYVQLGEDRKGFLPKRASLSQIKDVSSITLEDAVERLCYPVTLGK
Sbjct: 964  PDLNEKILLKKGPFGFYVQLGEDRKGFLPKRASLSQIKDVSSITLEDAVERLCYPVTLGK 1023

Query: 241  HPKDGEPVIIKMARVGFAVGHRRTTASIPENLKPNDIDLAKALELLSSSSIRRSGRSKSN 300
            HPKDGEPVIIKMARVGFAVGHRRTTASIPENLKPNDIDLAKALELLSSSSIRRSGRSKSN
Sbjct: 1024 HPKDGEPVIIKMARVGFAVGHRRTTASIPENLKPNDIDLAKALELLSSSSIRRSGRSKSN 1083

Query: 301  PKVASC 306
            PKVASC
Sbjct: 1084 PKVASC 1089

[Close]

BLAST of IVF0024332 vs. NCBI nr
Match: XP_016903546.1 (PREDICTED: DNA topoisomerase 1 isoform X2 [Cucumis melo])

HSP 1 Score: 624 bits (1610), Expect = 5.73e-213
Identity = 306/306 (100.00%), Postives = 306/306 (100.00%), Query Frame = 0


Query: 1    MEELGIGRPSTYATTLKVLKDRKYVSVKSRVLHPEFRGRMVSAFLSHHFSEVTDYSFTAD 60
            MEELGIGRPSTYATTLKVLKDRKYVSVKSRVLHPEFRGRMVSAFLSHHFSEVTDYSFTAD
Sbjct: 910  MEELGIGRPSTYATTLKVLKDRKYVSVKSRVLHPEFRGRMVSAFLSHHFSEVTDYSFTAD 969

Query: 61   MENELDNVSAGLTEWKGLLRDYWTRFSSYFERVNSVHIHQVEKMLEKKYGDFLFSFLPDN 120
            MENELDNVSAGLTEWKGLLRDYWTRFSSYFERVNSVHIHQVEKMLEKKYGDFLFSFLPDN
Sbjct: 970  MENELDNVSAGLTEWKGLLRDYWTRFSSYFERVNSVHIHQVEKMLEKKYGDFLFSFLPDN 1029

Query: 121  SRACPSCQEGTLIFKLSRFGPGYFIGCDQHPRCKHIAKTLHGEDEDNDNSFKEPKLLGLH 180
            SRACPSCQEGTLIFKLSRFGPGYFIGCDQHPRCKHIAKTLHGEDEDNDNSFKEPKLLGLH
Sbjct: 1030 SRACPSCQEGTLIFKLSRFGPGYFIGCDQHPRCKHIAKTLHGEDEDNDNSFKEPKLLGLH 1089

Query: 181  PDLNEKILLKKGPFGFYVQLGEDRKGFLPKRASLSQIKDVSSITLEDAVERLCYPVTLGK 240
            PDLNEKILLKKGPFGFYVQLGEDRKGFLPKRASLSQIKDVSSITLEDAVERLCYPVTLGK
Sbjct: 1090 PDLNEKILLKKGPFGFYVQLGEDRKGFLPKRASLSQIKDVSSITLEDAVERLCYPVTLGK 1149

Query: 241  HPKDGEPVIIKMARVGFAVGHRRTTASIPENLKPNDIDLAKALELLSSSSIRRSGRSKSN 300
            HPKDGEPVIIKMARVGFAVGHRRTTASIPENLKPNDIDLAKALELLSSSSIRRSGRSKSN
Sbjct: 1150 HPKDGEPVIIKMARVGFAVGHRRTTASIPENLKPNDIDLAKALELLSSSSIRRSGRSKSN 1209

Query: 301  PKVASC 306
            PKVASC
Sbjct: 1210 PKVASC 1215

[Close]

BLAST of IVF0024332 vs. NCBI nr
Match: XP_031737510.1 (uncharacterized protein LOC101210581 isoform X2 [Cucumis sativus])

HSP 1 Score: 581 bits (1497), Expect = 3.90e-201
Identity = 279/306 (91.18%), Postives = 292/306 (95.42%), Query Frame = 0


Query: 1   MEELGIGRPSTYATTLKVLKDRKYVSVKSRVLHPEFRGRMVSAFLSHHFSEVTDYSFTAD 60
           MEELGIGRPSTYATT+KVL+DRKYVSVKSRVLHPEFRGRMVSAFL HHFSEVTDYSFTAD
Sbjct: 497 MEELGIGRPSTYATTIKVLQDRKYVSVKSRVLHPEFRGRMVSAFLCHHFSEVTDYSFTAD 556

Query: 61  MENELDNVSAGLTEWKGLLRDYWTRFSSYFERVNSVHIHQVEKMLEKKYGDFLFSFLPDN 120
           MENELDNVSAGLTEWKGLLRDYWTRFSSYFE VNSVHIHQVEKMLEKKYG F+FSFLPDN
Sbjct: 557 MENELDNVSAGLTEWKGLLRDYWTRFSSYFESVNSVHIHQVEKMLEKKYGSFIFSFLPDN 616

Query: 121 SRACPSCQEGTLIFKLSRFGPGYFIGCDQHPRCKHIAKTLHGEDEDNDNSFKEPKLLGLH 180
           SR CPSCQEGTL FKLSRFG GYF+GCDQHP+CK+IAKT HGEDEDNDNS KEPKLLGLH
Sbjct: 617 SRTCPSCQEGTLTFKLSRFGAGYFVGCDQHPKCKYIAKTSHGEDEDNDNSLKEPKLLGLH 676

Query: 181 PDLNEKILLKKGPFGFYVQLGEDRKGFLPKRASLSQIKDVSSITLEDAVERLCYPVTLGK 240
           PDLNEKILLKKGPFG YVQLGEDRKG+LPKRASLSQIKDV+SITLEDAVERLCYPVTLG 
Sbjct: 677 PDLNEKILLKKGPFGLYVQLGEDRKGYLPKRASLSQIKDVTSITLEDAVERLCYPVTLGN 736

Query: 241 HPKDGEPVIIKMARVGFAVGHRRTTASIPENLKPNDIDLAKALELLSSSSIRRSGRSKSN 300
           HPKDG+PVIIKMARVGFAVGH RT AS+PENLKPND+DLAKALELLSSS++RRSGRSK  
Sbjct: 737 HPKDGQPVIIKMARVGFAVGHGRTAASVPENLKPNDVDLAKALELLSSSNVRRSGRSKRK 796

Query: 301 PKVASC 306
           PKVASC
Sbjct: 797 PKVASC 802

[Close]

BLAST of IVF0024332 vs. NCBI nr
Match: XP_011652536.2 (uncharacterized protein LOC101210581 isoform X1 [Cucumis sativus])

HSP 1 Score: 581 bits (1497), Expect = 5.74e-197
Identity = 279/306 (91.18%), Postives = 292/306 (95.42%), Query Frame = 0


Query: 1    MEELGIGRPSTYATTLKVLKDRKYVSVKSRVLHPEFRGRMVSAFLSHHFSEVTDYSFTAD 60
            MEELGIGRPSTYATT+KVL+DRKYVSVKSRVLHPEFRGRMVSAFL HHFSEVTDYSFTAD
Sbjct: 829  MEELGIGRPSTYATTIKVLQDRKYVSVKSRVLHPEFRGRMVSAFLCHHFSEVTDYSFTAD 888

Query: 61   MENELDNVSAGLTEWKGLLRDYWTRFSSYFERVNSVHIHQVEKMLEKKYGDFLFSFLPDN 120
            MENELDNVSAGLTEWKGLLRDYWTRFSSYFE VNSVHIHQVEKMLEKKYG F+FSFLPDN
Sbjct: 889  MENELDNVSAGLTEWKGLLRDYWTRFSSYFESVNSVHIHQVEKMLEKKYGSFIFSFLPDN 948

Query: 121  SRACPSCQEGTLIFKLSRFGPGYFIGCDQHPRCKHIAKTLHGEDEDNDNSFKEPKLLGLH 180
            SR CPSCQEGTL FKLSRFG GYF+GCDQHP+CK+IAKT HGEDEDNDNS KEPKLLGLH
Sbjct: 949  SRTCPSCQEGTLTFKLSRFGAGYFVGCDQHPKCKYIAKTSHGEDEDNDNSLKEPKLLGLH 1008

Query: 181  PDLNEKILLKKGPFGFYVQLGEDRKGFLPKRASLSQIKDVSSITLEDAVERLCYPVTLGK 240
            PDLNEKILLKKGPFG YVQLGEDRKG+LPKRASLSQIKDV+SITLEDAVERLCYPVTLG 
Sbjct: 1009 PDLNEKILLKKGPFGLYVQLGEDRKGYLPKRASLSQIKDVTSITLEDAVERLCYPVTLGN 1068

Query: 241  HPKDGEPVIIKMARVGFAVGHRRTTASIPENLKPNDIDLAKALELLSSSSIRRSGRSKSN 300
            HPKDG+PVIIKMARVGFAVGH RT AS+PENLKPND+DLAKALELLSSS++RRSGRSK  
Sbjct: 1069 HPKDGQPVIIKMARVGFAVGHGRTAASVPENLKPNDVDLAKALELLSSSNVRRSGRSKRK 1128

Query: 301  PKVASC 306
            PKVASC
Sbjct: 1129 PKVASC 1134

[Close]

BLAST of IVF0024332 vs. NCBI nr
Match: XP_022144286.1 (uncharacterized protein LOC111013976 [Momordica charantia])

HSP 1 Score: 514 bits (1325), Expect = 5.22e-171
Identity = 252/307 (82.08%), Postives = 274/307 (89.25%), Query Frame = 0


Query: 1    MEELGIGRPSTYATTLKVLKDRKYVSVKSRVLHPEFRGRMVSAFLSHHFSEVTDYSFTAD 60
            MEELGIGRPSTYATTLKVL+DR YVSVKSRVLHPEFRGRMVSAFL HHFSEVTDYSFTAD
Sbjct: 847  MEELGIGRPSTYATTLKVLQDRNYVSVKSRVLHPEFRGRMVSAFLCHHFSEVTDYSFTAD 906

Query: 61   MENELDNVSAGLTEWKGLLRDYWTRFSSYFERVNSVHIHQVEKMLEKKYGDFLFSFLPDN 120
            ME ELDNVSAGLTEWKGLLRDYWTRFSSY E  NSVHIHQVEKMLEKK+GDFLFSFLPDN
Sbjct: 907  METELDNVSAGLTEWKGLLRDYWTRFSSYCELANSVHIHQVEKMLEKKFGDFLFSFLPDN 966

Query: 121  SRACPSCQEGTLIFKLSRFGPGYFIGCDQHPRCKHIAKTLHGEDED----NDNSFKEPKL 180
             R CPSC EGTLIFK+SRFG GYFIGCDQHP+CK+IAKTL+GEDE+    N+NS +EPKL
Sbjct: 967  CRTCPSCLEGTLIFKVSRFGAGYFIGCDQHPKCKYIAKTLYGEDEEVTPQNNNSVEEPKL 1026

Query: 181  LGLHPDLNEKILLKKGPFGFYVQLGEDRKGFLPKRASLSQIKDVSSITLEDAVERLCYPV 240
            LGLHP  NEKILLK GP+GFYVQLGEDRKG+LPKRAS+SQIK V SITLEDA+E L YP+
Sbjct: 1027 LGLHPVSNEKILLKSGPYGFYVQLGEDRKGYLPKRASVSQIKHVDSITLEDALELLRYPI 1086

Query: 241  TLGKHPKDGEPVIIKMARVGFAVGHRRTTASIPENLKPNDIDLAKALELLSSSSIRRSGR 300
            TLG HPKDG+PVIIK+A+ GF+V HRRT A+IP+NLKPN I L KALELLSS+ +RR GR
Sbjct: 1087 TLGNHPKDGQPVIIKIAKAGFSVRHRRTIATIPKNLKPNGITLEKALELLSSNDVRRCGR 1146

Query: 301  SKSNPKV 303
             KS PKV
Sbjct: 1147 PKSKPKV 1153

[Close]

BLAST of IVF0024332 vs. TAIR 10
Match: AT4G31210.1 (DNA topoisomerase, type IA, core )

HSP 1 Score: 428.3 bits (1100), Expect = 5.1e-120
Identity = 198/301 (65.78%), Postives = 248/301 (82.39%), Query Frame = 0


Query: 1    MEELGIGRPSTYATTLKVLKDRKYVSVKSRVLHPEFRGRMVSAFLSHHFSEVTDYSFTAD 60
            +EELGIGRPSTYA+  +VL+ RKYV++K+RVL+PEFR RMVSAFL+H+F+E+TDYSFTAD
Sbjct: 964  LEELGIGRPSTYASIFRVLQHRKYVTIKNRVLYPEFRARMVSAFLTHYFTEITDYSFTAD 1023

Query: 61   MENELDNVSAGLTEWKGLLRDYWTRFSSYFERVNSVHIHQVEKMLEKKYGDFLFSFLPDN 120
            ME ELDNVS G+TEWKGLLRDYWTRFS+Y +RV +V   QVEKMLEKKY D LFS LP  
Sbjct: 1024 METELDNVSGGVTEWKGLLRDYWTRFSAYCKRVENVQRSQVEKMLEKKYEDVLFSLLPYP 1083

Query: 121  SRACPSCQEGTLIFKLSRFGPGYFIGCDQHPRCKHIAKTLHGEDEDND-----NSFKEPK 180
            SR CPSC EGTL FK S+FG GYFIGCDQHP CK IAKTL+GEDED D     N  +EPK
Sbjct: 1084 SRTCPSCMEGTLSFKASKFGAGYFIGCDQHPSCKFIAKTLYGEDEDEDDPPKNNCVEEPK 1143

Query: 181  LLGLHPDLNEKILLKKGPFGFYVQLGEDRKGFLPKRASLSQIKDVSSITLEDAVERLCYP 240
            LLGLHP+ +EK++LK GP+G YVQLGED+KG  PKRA+ + IKDV+SITLE A+E L YP
Sbjct: 1144 LLGLHPNTSEKVILKCGPYGHYVQLGEDKKGHTPKRANAAHIKDVNSITLESALELLRYP 1203

Query: 241  VTLGKHPKDGEPVIIKMARVGFAVGHRRTTASIPENLKPNDIDLAKALELLSSSSIRRSG 297
            +TLG HP+DG+PV++K+++ GF + HRR  A++P+N +P ++ L +A++LLS  ++R+SG
Sbjct: 1204 LTLGTHPEDGQPVVLKLSKSGFTIKHRRNMATVPKNTEPGEVTLERAMKLLSGKNVRKSG 1263

The following BLAST results are available for this feature:

BLAST of IVF0024332 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q4UM42	1.1e-50	38.38	DNA topoisomerase 1 OS=Rickettsia felis (strain ATCC VR-1525 / URRWXCal2) OX=315...	[more]
Q9ZDK2	3.5e-49	37.04	DNA topoisomerase 1 OS=Rickettsia prowazekii (strain Madrid E) OX=272947 GN=topA...	[more]
Q68X45	4.6e-49	36.18	DNA topoisomerase 1 OS=Rickettsia typhi (strain ATCC VR-144 / Wilmington) OX=257...	[more]
Q1RIM1	4.3e-47	36.86	DNA topoisomerase 1 OS=Rickettsia bellii (strain RML369-C) OX=336407 GN=topA PE=...	[more]
Q92IH1	8.1e-46	35.23	DNA topoisomerase 1 OS=Rickettsia conorii (strain ATCC VR-613 / Malish 7) OX=272...	[more]

BLAST of IVF0024332 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TAX8	1.0e-176	100.00	Omega-protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G006510...	[more]
A0A1S4E5M8	1.0e-176	100.00	Omega-protein OS=Cucumis melo OX=3656 GN=LOC103503742 PE=3 SV=1	[more]
A0A6J1CSY4	1.1e-143	82.08	Omega-protein OS=Momordica charantia OX=3673 GN=LOC111013976 PE=3 SV=1	[more]
A0A6J1IF86	4.8e-142	79.87	Omega-protein OS=Cucurbita maxima OX=3661 GN=LOC111476696 PE=3 SV=1	[more]
A0A6J1IMZ7	4.8e-142	79.87	Omega-protein OS=Cucurbita maxima OX=3661 GN=LOC111476696 PE=3 SV=1	[more]

BLAST of IVF0024332 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0038737.1	1.81e-214	100.00	DNA topoisomerase 1 isoform X2 [Cucumis melo var. makuwa] >TYK31350.1 DNA topois...	[more]
XP_016903546.1	5.73e-213	100.00	PREDICTED: DNA topoisomerase 1 isoform X2 [Cucumis melo]	[more]
XP_031737510.1	3.90e-201	91.18	uncharacterized protein LOC101210581 isoform X2 [Cucumis sativus]	[more]
XP_011652536.2	5.74e-197	91.18	uncharacterized protein LOC101210581 isoform X1 [Cucumis sativus]	[more]
XP_022144286.1	5.22e-171	82.08	uncharacterized protein LOC111013976 [Momordica charantia]	[more]

BLAST of IVF0024332 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G31210.1	5.1e-120	65.78	DNA topoisomerase, type IA, core	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013498	DNA topoisomerase, type IA, zn finger	PFAM	PF01396	zf-C4_Topoisom	coord: 122..158 e-value: 1.1E-8 score: 34.7
None	No IPR available	GENE3D	3.30.65.10	Bacterial Topoisomerase I, domain 1	coord: 117..166 e-value: 1.5E-6 score: 29.9
None	No IPR available	PANTHER	PTHR42785:SF4	BNAA01G05990D PROTEIN	coord: 1..299
IPR025589	Topoisomerase C-terminal repeat	PFAM	PF13368	Toprim_C_rpt	coord: 180..238 e-value: 7.8E-12 score: 45.0 coord: 241..289 e-value: 6.5E-6 score: 26.0
IPR013824	DNA topoisomerase, type IA, central region, subdomain 1	GENE3D	1.10.460.10	Topoisomerase I, domain 2	coord: 1..98 e-value: 9.4E-28 score: 99.2
IPR013497	DNA topoisomerase, type IA, central	PFAM	PF01131	Topoisom_bac	coord: 1..78 e-value: 1.5E-19 score: 70.4
IPR000380	DNA topoisomerase, type IA	PANTHER	PTHR42785	DNA TOPOISOMERASE, TYPE IA, CORE	coord: 1..299
IPR023405	DNA topoisomerase, type IA, core domain	SUPERFAMILY	56712	Prokaryotic type I DNA topoisomerase	coord: 1..132

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0024332.1	IVF0024332.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006265	DNA topological change
cellular_component	GO:0005694	chromosome
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003917	DNA topoisomerase type I (single strand cut, ATP-independent) activity
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0003916	DNA topoisomerase activity