IVF0022725 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTAGATGTGACAGCTGAGGCAACCATAGAAGAGATGGAGAGAAAAATAAATTTCCTAATGAAAGTTGTTGAGGAACGAGATCATGAAATCACAGCTTTGATGGAGCAGATGCAGACTCATGAAATTGCTGAGTCAAGTCAAACTCCTGTTGTCAAAGCTACTGATAAAGGGAAAAATGTGGTGTAA ATGGTAGATGTGACAGCTGAGGCAACCATAGAAGAGATGGAGAGAAAAATAAATTTCCTAATGAAAGTTGTTGAGGAACGAGATCATGAAATCACAGCTTTGATGGAGCAGATGCAGACTCATGAAATTGCTGAGTCAAGTCAAACTCCTGTTGTCAAAGCTACTGATAAAGGGAAAAATGTGGTGTAA ATGGTAGATGTGACAGCTGAGGCAACCATAGAAGAGATGGAGAGAAAAATAAATTTCCTAATGAAAGTTGTTGAGGAACGAGATCATGAAATCACAGCTTTGATGGAGCAGATGCAGACTCATGAAATTGCTGAGTCAAGTCAAACTCCTGTTGTCAAAGCTACTGATAAAGGGAAAAATGTGGTGTAA MVDVTAEATIEEMERKINFLMKVVEERDHEITALMEQMQTHEIAESSQTPVVKATDKGKNVV Homology
BLAST of IVF0022725 vs. ExPASy TrEMBL
Match: A0A5A7VEH1 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1827G00120 PE=4 SV=1) HSP 1 Score: 115.9 bits (289), Expect = 5.9e-23 Identity = 62/62 (100.00%), Postives = 62/62 (100.00%), Query Frame = 0
BLAST of IVF0022725 vs. ExPASy TrEMBL
Match: A0A5D3CLH2 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold227G001220 PE=4 SV=1) HSP 1 Score: 101.7 bits (252), Expect = 1.2e-18 Identity = 53/61 (86.89%), Postives = 58/61 (95.08%), Query Frame = 0
BLAST of IVF0022725 vs. ExPASy TrEMBL
Match: A0A5A7TYE9 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold236G00410 PE=4 SV=1) HSP 1 Score: 99.8 bits (247), Expect = 4.4e-18 Identity = 53/62 (85.48%), Postives = 56/62 (90.32%), Query Frame = 0
BLAST of IVF0022725 vs. ExPASy TrEMBL
Match: A0A5D3DK07 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold162G00460 PE=4 SV=1) HSP 1 Score: 99.4 bits (246), Expect = 5.7e-18 Identity = 53/62 (85.48%), Postives = 57/62 (91.94%), Query Frame = 0
BLAST of IVF0022725 vs. ExPASy TrEMBL
Match: A0A5A7UWX8 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold54G00740 PE=4 SV=1) HSP 1 Score: 99.0 bits (245), Expect = 7.5e-18 Identity = 51/62 (82.26%), Postives = 54/62 (87.10%), Query Frame = 0
BLAST of IVF0022725 vs. NCBI nr
Match: KAA0063929.1 (ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa] >TYK11304.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 117 bits (292), Expect = 1.08e-31 Identity = 62/62 (100.00%), Postives = 62/62 (100.00%), Query Frame = 0
BLAST of IVF0022725 vs. NCBI nr
Match: KAA0051467.1 (ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa] >TYK04154.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 97.8 bits (242), Expect = 4.22e-25 Identity = 49/62 (79.03%), Postives = 54/62 (87.10%), Query Frame = 0
BLAST of IVF0022725 vs. NCBI nr
Match: KAA0048603.1 (ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa] >TYK27187.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 100 bits (250), Expect = 4.47e-25 Identity = 53/62 (85.48%), Postives = 56/62 (90.32%), Query Frame = 0
BLAST of IVF0022725 vs. NCBI nr
Match: TYK11266.1 (ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 102 bits (255), Expect = 1.37e-24 Identity = 53/61 (86.89%), Postives = 58/61 (95.08%), Query Frame = 0
BLAST of IVF0022725 vs. NCBI nr
Match: KAA0041105.1 (ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 97.1 bits (240), Expect = 1.95e-24 Identity = 50/62 (80.65%), Postives = 56/62 (90.32%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
|