IVF0019909 (gene) Melon (IVF77) v1

Overview
NameIVF0019909
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionStress response protein NST1-like
Locationchr04: 18291509 .. 18291736 (-)
RNA-Seq ExpressionIVF0019909
SyntenyIVF0019909
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACCAAACTGGTGAAAATCCAAACCACCAAGGAAAAAAAACAAGAAATGCTCGCAGACCTGAGCGGGCAAGTGAAGAGTGTGGTAGTAAGAAATAAGGCTGCCAAAATGCAAAAGGTTGACTGCTTAGAGATTGTAGTGAAAGAGTTTGACAAAGAAATTGAGAAGATGAGCCATCTAGAGCCAAAACCACAACTTAAAGAGCAAGGGCTTGTCTATGTCGCATAA

mRNA sequence

ATGACCAAACTGGTGAAAATCCAAACCACCAAGGAAAAAAAACAAGAAATGCTCGCAGACCTGAGCGGGCAAGTGAAGAGTGTGGTAGTAAGAAATAAGGCTGCCAAAATGCAAAAGGTTGACTGCTTAGAGATTGTAGTGAAAGAGTTTGACAAAGAAATTGAGAAGATGAGCCATCTAGAGCCAAAACCACAACTTAAAGAGCAAGGGCTTGTCTATGTCGCATAA

Coding sequence (CDS)

ATGACCAAACTGGTGAAAATCCAAACCACCAAGGAAAAAAAACAAGAAATGCTCGCAGACCTGAGCGGGCAAGTGAAGAGTGTGGTAGTAAGAAATAAGGCTGCCAAAATGCAAAAGGTTGACTGCTTAGAGATTGTAGTGAAAGAGTTTGACAAAGAAATTGAGAAGATGAGCCATCTAGAGCCAAAACCACAACTTAAAGAGCAAGGGCTTGTCTATGTCGCATAA

Protein sequence

MTKLVKIQTTKEKKQEMLADLSGQVKSVVVRNKAAKMQKVDCLEIVVKEFDKEIEKMSHLEPKPQLKEQGLVYVA
Homology
BLAST of IVF0019909 vs. ExPASy TrEMBL
Match: A0A5A7TBU7 (Stress response protein NST1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold279G00120 PE=4 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 1.4e-10
Identity = 41/73 (56.16%), Postives = 58/73 (79.45%), Query Frame = 0

Query: 2   TKLVKIQTTKEKKQEMLADLSGQVKSVVVRNKAAKMQKVDCLEIVVKEFDKEIEKMSHLE 61
           TKL +IQTTK+KKQE LA LS QV+SVV R+K A+ Q+VD ++++V+EF +EIE MS L 
Sbjct: 154 TKLAEIQTTKKKKQETLASLSEQVESVVTRSKVAEHQEVDRVDVMVEEFSREIEGMSPLG 213

Query: 62  PKPQLKEQGLVYV 75
           P+P+ +E+GL  +
Sbjct: 214 PRPRPEEKGLTNI 226

BLAST of IVF0019909 vs. ExPASy TrEMBL
Match: A0A5D3DQE7 (Stress response protein NST1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold862G00740 PE=4 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 1.4e-10
Identity = 41/73 (56.16%), Postives = 58/73 (79.45%), Query Frame = 0

Query: 2   TKLVKIQTTKEKKQEMLADLSGQVKSVVVRNKAAKMQKVDCLEIVVKEFDKEIEKMSHLE 61
           TKL +IQTTK+KKQE LA LS QV+SVV R+K A+ Q+VD ++++V+EF +EIE MS L 
Sbjct: 123 TKLAEIQTTKKKKQETLASLSEQVESVVTRSKVAEHQEVDRVDVMVEEFSREIEGMSPLG 182

Query: 62  PKPQLKEQGLVYV 75
           P+P+ +E+GL  +
Sbjct: 183 PRPRPEEKGLTNI 195

BLAST of IVF0019909 vs. ExPASy TrEMBL
Match: A0A5D3BXZ2 (Stress response protein NST1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold675G00240 PE=4 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 1.8e-10
Identity = 43/74 (58.11%), Postives = 57/74 (77.03%), Query Frame = 0

Query: 2   TKLVKIQTTKEKKQEMLADLSGQVKSVVVRNKAAKMQKVDCLEIVVKEFDKEIEKMSHLE 61
           TKL +IQT K+KKQE LA+LS Q +SV  +NKA   Q+V+ LE+VV+EF +EI++MS LE
Sbjct: 116 TKLSEIQTAKKKKQETLANLSEQAESVATKNKAVARQEVNHLEVVVEEFSQEIKRMSSLE 175

Query: 62  PKPQLKEQGLVYVA 76
           P+ + KE GLV VA
Sbjct: 176 PRLRPKETGLVSVA 189

BLAST of IVF0019909 vs. ExPASy TrEMBL
Match: A0A5A7UBY9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold428G00710 PE=4 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 6.9e-10
Identity = 42/71 (59.15%), Postives = 53/71 (74.65%), Query Frame = 0

Query: 2   TKLVKIQTTKEKKQEMLADLSGQVKSVVVRNKAAKMQKVDCLEIVVKEFDKEIEKMSHLE 61
           TKL KIQT+K+KKQE L  LS QV SV  R K AK +KVDC+++VV+E ++EIE MS LE
Sbjct: 97  TKLAKIQTSKKKKQEKLTGLSEQVDSVAARCKVAKHEKVDCMDVVVEELNREIEGMSPLE 156

Query: 62  PKPQLKEQGLV 73
           P+ + KE  LV
Sbjct: 157 PRLRPKEPRLV 167

BLAST of IVF0019909 vs. ExPASy TrEMBL
Match: A0A5D3CVJ5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold637G00630 PE=4 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 1.2e-09
Identity = 43/71 (60.56%), Postives = 52/71 (73.24%), Query Frame = 0

Query: 2   TKLVKIQTTKEKKQEMLADLSGQVKSVVVRNKAAKMQKVDCLEIVVKEFDKEIEKMSHLE 61
           TKL KIQT+K+KKQE L  LS QV SV  R K AK +KVDCL+ VV+E ++EIE MS LE
Sbjct: 97  TKLAKIQTSKKKKQEKLTGLSEQVDSVAARCKVAKHEKVDCLDAVVEELNREIEGMSPLE 156

Query: 62  PKPQLKEQGLV 73
           P+ + KE  LV
Sbjct: 157 PRLRPKEPRLV 167

BLAST of IVF0019909 vs. NCBI nr
Match: KAA0052868.1 (stress response protein NST1-like [Cucumis melo var. makuwa] >TYK04357.1 stress response protein NST1-like [Cucumis melo var. makuwa])

HSP 1 Score: 74.7 bits (182), Expect = 3.01e-14
Identity = 43/74 (58.11%), Postives = 57/74 (77.03%), Query Frame = 0

Query: 2   TKLVKIQTTKEKKQEMLADLSGQVKSVVVRNKAAKMQKVDCLEIVVKEFDKEIEKMSHLE 61
           TKL +IQT K+KKQE LA+LS Q +SV  +NKA   Q+V+ LE+VV+EF +EI++MS LE
Sbjct: 116 TKLSEIQTAKKKKQETLANLSEQAESVATKNKAVARQEVNHLEVVVEEFSQEIKRMSSLE 175

Query: 62  PKPQLKEQGLVYVA 75
           P+ + KE GLV VA
Sbjct: 176 PRLRPKETGLVSVA 189

BLAST of IVF0019909 vs. NCBI nr
Match: KAA0053403.1 (hypothetical protein E6C27_scaffold428G00710 [Cucumis melo var. makuwa])

HSP 1 Score: 73.2 bits (178), Expect = 7.96e-14
Identity = 42/71 (59.15%), Postives = 53/71 (74.65%), Query Frame = 0

Query: 2   TKLVKIQTTKEKKQEMLADLSGQVKSVVVRNKAAKMQKVDCLEIVVKEFDKEIEKMSHLE 61
           TKL KIQT+K+KKQE L  LS QV SV  R K AK +KVDC+++VV+E ++EIE MS LE
Sbjct: 97  TKLAKIQTSKKKKQEKLTGLSEQVDSVAARCKVAKHEKVDCMDVVVEELNREIEGMSPLE 156

Query: 62  PKPQLKEQGLV 72
           P+ + KE  LV
Sbjct: 157 PRLRPKEPRLV 167

BLAST of IVF0019909 vs. NCBI nr
Match: TYK25768.1 (stress response protein NST1-like [Cucumis melo var. makuwa])

HSP 1 Score: 75.1 bits (183), Expect = 1.29e-13
Identity = 41/73 (56.16%), Postives = 58/73 (79.45%), Query Frame = 0

Query: 2   TKLVKIQTTKEKKQEMLADLSGQVKSVVVRNKAAKMQKVDCLEIVVKEFDKEIEKMSHLE 61
           TKL +IQTTK+KKQE LA LS QV+SVV R+K A+ Q+VD ++++V+EF +EIE MS L 
Sbjct: 123 TKLAEIQTTKKKKQETLASLSEQVESVVTRSKVAEHQEVDRVDVMVEEFSREIEGMSPLG 182

Query: 62  PKPQLKEQGLVYV 74
           P+P+ +E+GL  +
Sbjct: 183 PRPRPEEKGLTNI 195

BLAST of IVF0019909 vs. NCBI nr
Match: KAA0038829.1 (stress response protein NST1-like [Cucumis melo var. makuwa])

HSP 1 Score: 75.1 bits (183), Expect = 1.31e-13
Identity = 41/73 (56.16%), Postives = 58/73 (79.45%), Query Frame = 0

Query: 2   TKLVKIQTTKEKKQEMLADLSGQVKSVVVRNKAAKMQKVDCLEIVVKEFDKEIEKMSHLE 61
           TKL +IQTTK+KKQE LA LS QV+SVV R+K A+ Q+VD ++++V+EF +EIE MS L 
Sbjct: 154 TKLAEIQTTKKKKQETLASLSEQVESVVTRSKVAEHQEVDRVDVMVEEFSREIEGMSPLG 213

Query: 62  PKPQLKEQGLVYV 74
           P+P+ +E+GL  +
Sbjct: 214 PRPRPEEKGLTNI 226

BLAST of IVF0019909 vs. NCBI nr
Match: TYK15883.1 (hypothetical protein E5676_scaffold637G00630 [Cucumis melo var. makuwa])

HSP 1 Score: 72.4 bits (176), Expect = 1.58e-13
Identity = 43/71 (60.56%), Postives = 52/71 (73.24%), Query Frame = 0

Query: 2   TKLVKIQTTKEKKQEMLADLSGQVKSVVVRNKAAKMQKVDCLEIVVKEFDKEIEKMSHLE 61
           TKL KIQT+K+KKQE L  LS QV SV  R K AK +KVDCL+ VV+E ++EIE MS LE
Sbjct: 97  TKLAKIQTSKKKKQEKLTGLSEQVDSVAARCKVAKHEKVDCLDAVVEELNREIEGMSPLE 156

Query: 62  PKPQLKEQGLV 72
           P+ + KE  LV
Sbjct: 157 PRLRPKEPRLV 167

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7TBU71.4e-1056.16Stress response protein NST1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2... [more]
A0A5D3DQE71.4e-1056.16Stress response protein NST1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E567... [more]
A0A5D3BXZ21.8e-1058.11Stress response protein NST1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E567... [more]
A0A5A7UBY96.9e-1059.15Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5D3CVJ51.2e-0960.56Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
Match NameE-valueIdentityDescription
KAA0052868.13.01e-1458.11stress response protein NST1-like [Cucumis melo var. makuwa] >TYK04357.1 stress ... [more]
KAA0053403.17.96e-1459.15hypothetical protein E6C27_scaffold428G00710 [Cucumis melo var. makuwa][more]
TYK25768.11.29e-1356.16stress response protein NST1-like [Cucumis melo var. makuwa][more]
KAA0038829.11.31e-1356.16stress response protein NST1-like [Cucumis melo var. makuwa][more]
TYK15883.11.58e-1360.56hypothetical protein E5676_scaffold637G00630 [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0019909.2IVF0019909.2mRNA