Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTTAATGCTTCCAACGAGTGGCGAACGCTCGTCCGGTGTCAGAAACCACTGGAAATGCCCTTGCAGCGAAGGAAACGAGCTGAGCTCGAGGAATTCCGGTGCTCGTCCCAAGAAAACGTGAGCGAGAATGCCCCGGACTCAGTTTTCTCGTCCTGGGGTAAAAAGCGGTCCTCCGACGGTTTCTTCCCTTTGCTCCGTATTGGTAATATGTCTTTCGATCTTCGGGGCTCGTGCTCCAAGGAATTCAACCCACACTCCTGGCATGCTCCCTAA
mRNA sequence
ATGGTTAATGCTTCCAACGAGTGGCGAACGCTCGTCCGGTGTCAGAAACCACTGGAAATGCCCTTGCAGCGAAGGAAACGAGCTGAGCTCGAGGAATTCCGGTGCTCGTCCCAAGAAAACGTGAGCGAGAATGCCCCGGACTCAGTTTTCTCGTCCTGGGGTAAAAAGCGGTCCTCCGACGGTTTCTTCCCTTTGCTCCGTATTGGTAATATGTCTTTCGATCTTCGGGGCTCGTGCTCCAAGGAATTCAACCCACACTCCTGGCATGCTCCCTAA
Coding sequence (CDS)
ATGGTTAATGCTTCCAACGAGTGGCGAACGCTCGTCCGGTGTCAGAAACCACTGGAAATGCCCTTGCAGCGAAGGAAACGAGCTGAGCTCGAGGAATTCCGGTGCTCGTCCCAAGAAAACGTGAGCGAGAATGCCCCGGACTCAGTTTTCTCGTCCTGGGGTAAAAAGCGGTCCTCCGACGGTTTCTTCCCTTTGCTCCGTATTGGTAATATGTCTTTCGATCTTCGGGGCTCGTGCTCCAAGGAATTCAACCCACACTCCTGGCATGCTCCCTAA
Protein sequence
MVNASNEWRTLVRCQKPLEMPLQRRKRAELEEFRCSSQENVSENAPDSVFSSWGKKRSSDGFFPLLRIGNMSFDLRGSCSKEFNPHSWHAP
Homology
BLAST of IVF0019553 vs. ExPASy TrEMBL
Match:
A0A5A7UVV0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold43054G00020 PE=4 SV=1)
HSP 1 Score: 142.1 bits (357), Expect = 1.1e-30
Identity = 67/90 (74.44%), Postives = 77/90 (85.56%), Query Frame = 0
Query: 1 MVNASNEWRTLVRCQKPLEMPLQRRKRAELEEFRCSSQENVSENAPDSVFSSWGKKRSSD 60
M NASNEW+TLVRCQKPLEM LQRRK+ EL++F CSSQEN S+NAPDS FSSWGKKRS
Sbjct: 1 MANASNEWQTLVRCQKPLEMYLQRRKQTELKDFWCSSQENASDNAPDSAFSSWGKKRSPY 60
Query: 61 GFFPLLRIGNMSFDLRGSCSKEFNPHSWHA 91
GFF LLRIG+ SFDL+GS ++FN HSWH+
Sbjct: 61 GFFHLLRIGHKSFDLQGSYYEDFNRHSWHS 90
BLAST of IVF0019553 vs. ExPASy TrEMBL
Match:
A0A5D3DFP2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold387G00220 PE=4 SV=1)
HSP 1 Score: 130.6 bits (327), Expect = 3.4e-27
Identity = 63/72 (87.50%), Postives = 65/72 (90.28%), Query Frame = 0
Query: 1 MVNASNEWRTLVRCQKPLEMPLQRRKRAELEEFRCSSQENVSENAPDSVFSSWGKKRSSD 60
M NASNEWR LVRCQKPLEM LQRRKR ELE+FRCSSQENVSENAPDS FSSWGKKRS D
Sbjct: 165 MANASNEWRMLVRCQKPLEMHLQRRKRVELEDFRCSSQENVSENAPDSAFSSWGKKRSPD 224
Query: 61 GFFPLLRIGNMS 73
GFFPLLRIG+ S
Sbjct: 225 GFFPLLRIGHKS 236
BLAST of IVF0019553 vs. ExPASy TrEMBL
Match:
A0A5D3CGX3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold315G00560 PE=4 SV=1)
HSP 1 Score: 120.9 bits (302), Expect = 2.7e-24
Identity = 65/100 (65.00%), Postives = 73/100 (73.00%), Query Frame = 0
Query: 3 NASNEWRTLVRCQKPLEMPLQRRKRAELEE---------------FRCSSQENVSENAPD 62
NAS EWRTLVRCQKPL+M LQ+RK AELE+ FRCSS EN SENA D
Sbjct: 286 NASKEWRTLVRCQKPLKMHLQQRKWAELEDFWCSSQQRKRVELDVFRCSSLENASENALD 345
Query: 63 SVFSSWGKKRSSDGFFPLLRIGNMSFDLRGSCSKEFNPHS 88
SVFSS G+K+ D FFPLLRIG+ SFDLRGS S++FNPHS
Sbjct: 346 SVFSSCGEKQFFDDFFPLLRIGHQSFDLRGSYSEDFNPHS 385
BLAST of IVF0019553 vs. ExPASy TrEMBL
Match:
A0A5D3E5W4 (NBS-LRR type resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G002550 PE=4 SV=1)
HSP 1 Score: 116.3 bits (290), Expect = 6.6e-23
Identity = 58/75 (77.33%), Postives = 64/75 (85.33%), Query Frame = 0
Query: 1 MVNASNEWRTLVRCQKPLEMPLQRRKRAELEEFRCSSQENVSENAPDSVFSSWGKKRSSD 60
MV+ASNEWRTLVRCQKPLEM LQ+RKRAELE+F SQEN SENA + VFSSWGKK S +
Sbjct: 1 MVDASNEWRTLVRCQKPLEMHLQKRKRAELEDFWSLSQENTSENALNPVFSSWGKKGSPN 60
Query: 61 GFFPLLRIGNMSFDL 76
GFFPL RIG+ SFDL
Sbjct: 61 GFFPLFRIGHKSFDL 75
BLAST of IVF0019553 vs. ExPASy TrEMBL
Match:
A0A5A7V5J2 (Non-LTR retroelement reverse transcriptase-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold387G00210 PE=4 SV=1)
HSP 1 Score: 113.2 bits (282), Expect = 5.6e-22
Identity = 52/70 (74.29%), Postives = 61/70 (87.14%), Query Frame = 0
Query: 22 LQRRKRAELEEFRCSSQENVSENAPDSVFSSWGKKRSSDGFFPLLRIGNMSFDLRGSCSK 81
++RR RA+L++FRCSSQEN SEN DSVFSSW KK + DGFFPLLRIG+ SFDLRGS S+
Sbjct: 1017 VERRNRADLKDFRCSSQENASENDSDSVFSSWCKKWTPDGFFPLLRIGHKSFDLRGSYSE 1076
Query: 82 EFNPHSWHAP 92
+FNPHSWHAP
Sbjct: 1077 DFNPHSWHAP 1086
BLAST of IVF0019553 vs. NCBI nr
Match:
KAA0057641.1 (hypothetical protein E6C27_scaffold43054G00020 [Cucumis melo var. makuwa])
HSP 1 Score: 142 bits (357), Expect = 6.76e-37
Identity = 67/90 (74.44%), Postives = 77/90 (85.56%), Query Frame = 0
Query: 1 MVNASNEWRTLVRCQKPLEMPLQRRKRAELEEFRCSSQENVSENAPDSVFSSWGKKRSSD 60
M NASNEW+TLVRCQKPLEM LQRRK+ EL++F CSSQEN S+NAPDS FSSWGKKRS
Sbjct: 1 MANASNEWQTLVRCQKPLEMYLQRRKQTELKDFWCSSQENASDNAPDSAFSSWGKKRSPY 60
Query: 61 GFFPLLRIGNMSFDLRGSCSKEFNPHSWHA 90
GFF LLRIG+ SFDL+GS ++FN HSWH+
Sbjct: 61 GFFHLLRIGHKSFDLQGSYYEDFNRHSWHS 90
BLAST of IVF0019553 vs. NCBI nr
Match:
TYK22521.1 (uncharacterized protein E5676_scaffold387G00220 [Cucumis melo var. makuwa])
HSP 1 Score: 129 bits (325), Expect = 1.21e-32
Identity = 63/72 (87.50%), Postives = 65/72 (90.28%), Query Frame = 0
Query: 1 MVNASNEWRTLVRCQKPLEMPLQRRKRAELEEFRCSSQENVSENAPDSVFSSWGKKRSSD 60
M NASNEWR LVRCQKPLEM LQRRKR ELE+FRCSSQENVSENAPDS FSSWGKKRS D
Sbjct: 165 MANASNEWRMLVRCQKPLEMHLQRRKRVELEDFRCSSQENVSENAPDSAFSSWGKKRSPD 224
Query: 61 GFFPLLRIGNMS 72
GFFPLLRIG+ S
Sbjct: 225 GFFPLLRIGHKS 236
BLAST of IVF0019553 vs. NCBI nr
Match:
KAA0040927.1 (hypothetical protein E6C27_scaffold125G00720 [Cucumis melo var. makuwa] >TYK10610.1 hypothetical protein E5676_scaffold315G00560 [Cucumis melo var. makuwa])
HSP 1 Score: 120 bits (301), Expect = 3.11e-30
Identity = 65/100 (65.00%), Postives = 73/100 (73.00%), Query Frame = 0
Query: 3 NASNEWRTLVRCQKPLEMPLQRRKRAELEEF---------------RCSSQENVSENAPD 62
NAS EWRTLVRCQKPL+M LQ+RK AELE+F RCSS EN SENA D
Sbjct: 286 NASKEWRTLVRCQKPLKMHLQQRKWAELEDFWCSSQQRKRVELDVFRCSSLENASENALD 345
Query: 63 SVFSSWGKKRSSDGFFPLLRIGNMSFDLRGSCSKEFNPHS 87
SVFSS G+K+ D FFPLLRIG+ SFDLRGS S++FNPHS
Sbjct: 346 SVFSSCGEKQFFDDFFPLLRIGHQSFDLRGSYSEDFNPHS 385
BLAST of IVF0019553 vs. NCBI nr
Match:
KAA0035524.1 (NBS-LRR type resistance protein [Cucumis melo var. makuwa] >TYK31010.1 NBS-LRR type resistance protein [Cucumis melo var. makuwa])
HSP 1 Score: 115 bits (289), Expect = 1.18e-28
Identity = 59/81 (72.84%), Postives = 65/81 (80.25%), Query Frame = 0
Query: 1 MVNASNEWRTLVRCQKPLEMPLQRRKRAELEEFRCSSQENVSENAPDSVFSSWGKKRSSD 60
MV+ASNEWRTLVRCQKPLEM LQ+RKRAELE+F SQEN SENA + VFSSWGKK S +
Sbjct: 1 MVDASNEWRTLVRCQKPLEMHLQKRKRAELEDFWSLSQENTSENALNPVFSSWGKKGSPN 60
Query: 61 GFFPLLRIGNMSFDLRGSCSK 81
GFFPL RIG+ SFDL K
Sbjct: 61 GFFPLFRIGHKSFDLEDHTLK 81
BLAST of IVF0019553 vs. NCBI nr
Match:
KAA0062888.1 (non-LTR retroelement reverse transcriptase-like protein [Cucumis melo var. makuwa] >TYK22520.1 non-LTR retroelement reverse transcriptase-like protein [Cucumis melo var. makuwa])
HSP 1 Score: 114 bits (285), Expect = 4.28e-27
Identity = 52/70 (74.29%), Postives = 61/70 (87.14%), Query Frame = 0
Query: 22 LQRRKRAELEEFRCSSQENVSENAPDSVFSSWGKKRSSDGFFPLLRIGNMSFDLRGSCSK 81
++RR RA+L++FRCSSQEN SEN DSVFSSW KK + DGFFPLLRIG+ SFDLRGS S+
Sbjct: 1017 VERRNRADLKDFRCSSQENASENDSDSVFSSWCKKWTPDGFFPLLRIGHKSFDLRGSYSE 1076
Query: 82 EFNPHSWHAP 91
+FNPHSWHAP
Sbjct: 1077 DFNPHSWHAP 1086
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5A7UVV0 | 1.1e-30 | 74.44 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
A0A5D3DFP2 | 3.4e-27 | 87.50 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A5D3CGX3 | 2.7e-24 | 65.00 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A5D3E5W4 | 6.6e-23 | 77.33 | NBS-LRR type resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_... | [more] |
A0A5A7V5J2 | 5.6e-22 | 74.29 | Non-LTR retroelement reverse transcriptase-like protein OS=Cucumis melo var. mak... | [more] |
Match Name | E-value | Identity | Description | |
KAA0057641.1 | 6.76e-37 | 74.44 | hypothetical protein E6C27_scaffold43054G00020 [Cucumis melo var. makuwa] | [more] |
TYK22521.1 | 1.21e-32 | 87.50 | uncharacterized protein E5676_scaffold387G00220 [Cucumis melo var. makuwa] | [more] |
KAA0040927.1 | 3.11e-30 | 65.00 | hypothetical protein E6C27_scaffold125G00720 [Cucumis melo var. makuwa] >TYK1061... | [more] |
KAA0035524.1 | 1.18e-28 | 72.84 | NBS-LRR type resistance protein [Cucumis melo var. makuwa] >TYK31010.1 NBS-LRR t... | [more] |
KAA0062888.1 | 4.28e-27 | 74.29 | non-LTR retroelement reverse transcriptase-like protein [Cucumis melo var. makuw... | [more] |
Match Name | E-value | Identity | Description | |