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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGAGAGCAAAGGAGGACGAAGAGGCACGTTACAAGAAATGTGATGAGGAGGAAAGGCGAAGGAAAAAGGAATTGAAGAAACAAGGGAAAAACGAACAATCTTCCTTTCCTGTCACCTCAACTGAGTTTGAAAGGGTCATGAGAAAGGCCCAAGGGAAGAAAGAGAAGGTAGCATATAGCCTTCTCAAAATGAAAGTCACGGTGTAA mRNA sequence ATGAGAGCAAAGGAGGACGAAGAGGCACGTTACAAGAAATGTGATGAGGAGGAAAGGCGAAGGAAAAAGGAATTGAAGAAACAAGGGAAAAACGAACAATCTTCCTTTCCTGTCACCTCAACTGAGTTTGAAAGGGTCATGAGAAAGGCCCAAGGGAAGAAAGAGAAGGTAGCATATAGCCTTCTCAAAATGAAAGTCACGGTGTAA Coding sequence (CDS) ATGAGAGCAAAGGAGGACGAAGAGGCACGTTACAAGAAATGTGATGAGGAGGAAAGGCGAAGGAAAAAGGAATTGAAGAAACAAGGGAAAAACGAACAATCTTCCTTTCCTGTCACCTCAACTGAGTTTGAAAGGGTCATGAGAAAGGCCCAAGGGAAGAAAGAGAAGGTAGCATATAGCCTTCTCAAAATGAAAGTCACGGTGTAA Protein sequence MRAKEDEEARYKKCDEEERRRKKELKKQGKNEQSSFPVTSTEFERVMRKAQGKKEKVAYSLLKMKVTV
Homology
BLAST of IVF0018904 vs. ExPASy TrEMBL
Match: A0A5D3BNL6 (Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1923G00100 PE=4 SV=1) HSP 1 Score: 67.8 bits (164), Expect = 2.0e-08 Identity = 47/69 (68.12%), Postives = 52/69 (75.36%), Query Frame = 0
Query: 2 RAKEDEEARYKKCDEEERRRKKELKKQGKNE--QSSFPVTSTEFERVMRKAQGKKEKVAY 61
+AKE E+ R KK +EEERRRK+ELKKQGK E QSS + TEFERV RKAQ KKEKV
Sbjct: 51 KAKEKEKERRKKRNEEERRRKEELKKQGKKEKVQSSPSIAPTEFERVARKAQKKKEKVVS 110
Query: 62 SLLKMKVTV 69
LLKMKV V
Sbjct: 111 GLLKMKVIV 119
BLAST of IVF0018904 vs. NCBI nr
Match: TYK00332.1 (protein MNN4-like [Cucumis melo var. makuwa]) HSP 1 Score: 67.0 bits (162), Expect = 1.19e-11 Identity = 47/68 (69.12%), Postives = 51/68 (75.00%), Query Frame = 0
Query: 3 AKEDEEARYKKCDEEERRRKKELKKQGKNE--QSSFPVTSTEFERVMRKAQGKKEKVAYS 62
AKE E+ R KK +EEERRRK+ELKKQGK E QSS + TEFERV RKAQ KKEKV
Sbjct: 52 AKEKEKERRKKRNEEERRRKEELKKQGKKEKVQSSPSIAPTEFERVARKAQKKKEKVVSG 111
Query: 63 LLKMKVTV 68
LLKMKV V
Sbjct: 112 LLKMKVIV 119
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A5D3BNL6 | 2.0e-08 | 68.12 | Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1923G0... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| TYK00332.1 | 1.19e-11 | 69.12 | protein MNN4-like [Cucumis melo var. makuwa] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
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| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1..30 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1..41 |
Relationships
The following mRNA feature(s) are a part of this gene:
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