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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGAGATATGAACATTCTCAGCGGTTTTCCACGCAATTTTCTTTTGCTCCTCTATTCTATTTATTTCCTCTTCTCTGCACATTGAATTTCGCGGCATTCTCTCGTTCGCTGATCACTTTTCATCTTTTTCTCAACAGTGAGCGCCTTCTTTCCTCTTCTGATTTATGCCATGTGTTCTTTATTGTTGTGATTTCTATACTTTTCTTGTATTCATTTGATAAATTCTGACTTGGGTGTGCTTTAAATCCTCGATGAATTGCAAAAGGTTTCAAATTGGGTCACTCTGTGATAAAAAATGGTGGGGAAAATTTGGGAAATTGATTGAATTTAATTTGCTCTTCTATTTGCAGTTGCCCATGTGCTAAATGTGAGGAAATAATTGAAATTTTAGAAGATGTTTCTCTTTGATGATCAATTTATCTTATTGTTTGGATTTTGCTTACCAATTTAAGCTTATGAACTTTCGCAATAATTGTTTGTGTTGTGTCTTATTGCATGTAATTTAAGAATTGGACAACTCTGACTTTTTCACATTTACCCCCAAATTTAATGTCTGCAGATCCTTCTTATTGA mRNA sequence ATGAGATATGAACATTCTCAGCGGTTTTCCACGCAATTTTCTTTTGCTCCTCTATTCTATTTATTTCCTCTTCTCTGCACATTGAATTTCGCGGCATTCTCTCGTTCGCTGATCACTTTTCATCTTTTTCTCAACAGTGAGCGCCTTCTTTCCTCTTCTGATTTATGCCATGTTTGCCCATGTGCTAAATATCCTTCTTATTGA Coding sequence (CDS) ATGAGATATGAACATTCTCAGCGGTTTTCCACGCAATTTTCTTTTGCTCCTCTATTCTATTTATTTCCTCTTCTCTGCACATTGAATTTCGCGGCATTCTCTCGTTCGCTGATCACTTTTCATCTTTTTCTCAACAGTGAGCGCCTTCTTTCCTCTTCTGATTTATGCCATGTTTGCCCATGTGCTAAATATCCTTCTTATTGA Protein sequence MRYEHSQRFSTQFSFAPLFYLFPLLCTLNFAAFSRSLITFHLFLNSERLLSSSDLCHVCPCAKYPSY
Homology
BLAST of IVF0018203 vs. ExPASy TrEMBL
Match: A0A0A0K9W7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G079770 PE=4 SV=1) HSP 1 Score: 77.0 bits (188), Expect = 3.3e-11 Identity = 42/66 (63.64%), Postives = 43/66 (65.15%), Query Frame = 0 Query: 2 RYEHSQRFSTQFSFAPLFYLFPLLCTLNFAAFSRSLITFHLFLNSERLLSSSDLCHVCPC 61 RYEHSQR ST+FSFA PLLCTLNFAAFS SLITFHLF CPC Sbjct: 13 RYEHSQRLSTRFSFATPILFIPLLCTLNFAAFSLSLITFHLFSQH------------CPC 66
Query: 62 AKYPSY 68 AKYPSY Sbjct: 73 AKYPSY 66
BLAST of IVF0018203 vs. NCBI nr
Match: KGN46283.1 (hypothetical protein Csa_005738 [Cucumis sativus]) HSP 1 Score: 75.1 bits (183), Expect = 5.18e-16 Identity = 43/66 (65.15%), Postives = 45/66 (68.18%), Query Frame = 0 Query: 2 RYEHSQRFSTQFSFAPLFYLFPLLCTLNFAAFSRSLITFHLFLNSERLLSSSDLCHVCPC 61 RYEHSQR ST+FSFA PLLCTLNFAAFS SLITFHLF S+ CPC Sbjct: 13 RYEHSQRLSTRFSFATPILFIPLLCTLNFAAFSLSLITFHLF--SQH----------CPC 66
Query: 62 AKYPSY 67 AKYPSY Sbjct: 73 AKYPSY 66
BLAST of IVF0018203 vs. NCBI nr
Match: XP_031743096.1 (UMP-CMP kinase 3 isoform X1 [Cucumis sativus]) HSP 1 Score: 65.1 bits (157), Expect = 2.05e-10 Identity = 35/50 (70.00%), Postives = 37/50 (74.00%), Query Frame = 0 Query: 2 RYEHSQRFSTQFSFAPLFYLFPLLCTLNFAAFSRSLITFHLFLNSERLLS 51 RYEHSQR ST+FSFA PLLCTLNFAAFS SLITFHLF LL+ Sbjct: 13 RYEHSQRLSTRFSFATPILFIPLLCTLNFAAFSLSLITFHLFSQQSFLLN 62
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A0A0K9W7 | 3.3e-11 | 63.64 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G079770 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
KGN46283.1 | 5.18e-16 | 65.15 | hypothetical protein Csa_005738 [Cucumis sativus] | [more] |
XP_031743096.1 | 2.05e-10 | 70.00 | UMP-CMP kinase 3 isoform X1 [Cucumis sativus] | [more] |
Match Name | E-value | Identity | Description | |
Relationships
The following mRNA feature(s) are a part of this gene:
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