IVF0017872 (gene) Melon (IVF77) v1

Overview


Name	IVF0017872
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Chaperone protein dnaJ 8
Location	chr04: 24225475 .. 24227285 (+)
RNA-Seq Expression	IVF0017872
Synteny	IVF0017872

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCGACGATCTCGGCCCTCCACACCCTCCCAATTCCGAATCTTCTATTTATTTCCCTTCCCTTTCCCATTCCATTTCCCCCTTACTCATTCCAAAATTTAACTACACTTCCTTCTTCTCCTCCTCTTTAATGGCGTCCGTCGCTACTGCTGGATTCATCGCACGATCTTCCTCTTCTTCCTCTTCCTCTTCCTGTATTCGCAATACGAATCGTCCGAAGAAGAATCGGACTTCCTCTAATCAACTTAGGGTTTCTTGTTCTTCTTCTTCTTCCGTCGCCGATCCTTATCGAACTCTTCGGATTCAACCCGGTGCCTCTGAATCCGAAGTCAAAAAAGCCTTCCGACATCTCGCTCTTCAGGTTTGGTCTATTCTTTCTTTCCATTTCTTTATATTACAGGATTTGTTCGATCGCCTGGTTCTTACGATTTCGTTGATACTTCTTTTTTTCCAGTATCATCCTGATGTTTGTAGAGGGAGTAATTGTGGCGTGCAGTTTCATCAAATCAACGAAGCTTACGATGTACGTGATCATACCCTTTTTTTTCAATTTTTTACTAAAATTAGGATCAATTATTGAAACGATGAATTGTTTCTCTCTCTCTCTCTCTCTCTCTTAAAATAATAATAATTGTGCAGCTATTGCAATTACCAATTTTCTTTTCTTCCGCACATAAGTACGAATTAAATATATGCATATTTAGAGGGAATAGTTTGAATTTCACTATATTTAGCGTGTGAAATTGAGTGTTTGGTTAGGTTTATGTCGGTTTCATAGTGTTTTCGATCATTCTAATATTGAATTTCCTATACCTATTTGTCGTATATCATGTTAGGTTAAATTATATATATACACACACTTGGACTTTGTCTTTTGCTTTTGTTGGGTCCCAGATTGACCCAAAATTGGTTTATCCTTTTTATGTAAATTGCAAATTTGATCCTAGCGCTGTGTTAGTTATCATAGCTTGGGTGATATGAAGTTGGGTCCCAAACACCTCCACCGTGTTTGTCTTATACATAATTTCTACTGTTGGCAAAGGACTAAATTCTAACTTTTTCTTGAAGTAAATGGATCAAATTTGTATGTTAAATGAATTCTTGCAGCAGTTCTGAGCTATGAAGATTAGTTTGAATTTTGCTAACGAGGTAATTTTTGATTTGGTGAAACAGATTGTGATGAATAACTTAAGAGGTATATCAACGCCAATAGAGACATATGAAACAATATATGATGAAGGGATTGATGAACCGATGAGAGGAATGGGGGATCCAGATTGGGACTTATGGGAAGAATGGATGGGATGGGAAGGAGCAGGAATTCGTGATTATTCATCTCATATTAATCCCTATATTTAAAACCCAAAAACAAAAAGTTAAAAATCAGTTATGAGTTGTTCATAGAATTGGTCTTTAATCTATCAACATCAGCAACAACCAACGGTTGTGATGATTTGGTTTGGCTTGTATATATGGTGGGAAAAGAGGGGAGGTTGAAATTGGTATTAATTCATTATTGTGTGTACCCTTTTTCAAGAGGTGTTTGTTGTACATATGGTCAAGAACAGAGCCTTTTGGGTCTTTTAATAATATGAAAAGGCTTTGAAGAATGGCCTATCAAAGTTGTGGTGGGACATTAGTGTTTTATCTTTTAACTCTTTATCTTGTTGTTTGCCCGATTGGACGTGGTGCTTTTTTGTCTACTCGTTTCTGTCCAATATTATCCGTTTCTTGAATAAAATTAAAAAGGTGGGGATAGGAATGACTATTACCTTTGTTCAGTTTTATTTTAATGGAAAGGAATTGCCTTCCG

mRNA sequence

CCGACGATCTCGGCCCTCCACACCCTCCCAATTCCGAATCTTCTATTTATTTCCCTTCCCTTTCCCATTCCATTTCCCCCTTACTCATTCCAAAATTTAACTACACTTCCTTCTTCTCCTCCTCTTTAATGGCGTCCGTCGCTACTGCTGGATTCATCGCACGATCTTCCTCTTCTTCCTCTTCCTCTTCCTGTATTCGCAATACGAATCGTCCGAAGAAGAATCGGACTTCCTCTAATCAACTTAGGGTTTCTTGTTCTTCTTCTTCTTCCGTCGCCGATCCTTATCGAACTCTTCGGATTCAACCCGGTGCCTCTGAATCCGAAGTCAAAAAAGCCTTCCGACATCTCGCTCTTCAGTATCATCCTGATGTTTGTAGAGGGAGTAATTGTGGCGTGCAGTTTCATCAAATCAACGAAGCTTACGATATTGTGATGAATAACTTAAGAGGTATATCAACGCCAATAGAGACATATGAAACAATATATGATGAAGGGATTGATGAACCGATGAGAGGAATGGGGGATCCAGATTGGGACTTATGGGAAGAATGGATGGGATGGGAAGGAGCAGGAATTCGTGATTATTCATCTCATATTAATCCCTATATTTAAAACCCAAAAACAAAAAGTTAAAAATCAGTTATGAGTTGTTCATAGAATTGGTCTTTAATCTATCAACATCAGCAACAACCAACGGTTGTGATGATTTGGTTTGGCTTGTATATATGGTGGGAAAAGAGGGGAGGTTGAAATTGGTATTAATTCATTATTGTGTGTACCCTTTTTCAAGAGGTGTTTGTTGTACATATGGTCAAGAACAGAGCCTTTTGGGTCTTTTAATAATATGAAAAGGCTTTGAAGAATGGCCTATCAAAGTTGTGGTGGGACATTAGTGTTTTATCTTTTAACTCTTTATCTTGTTGTTTGCCCGATTGGACGTGGTGCTTTTTTGTCTACTCGTTTCTGTCCAATATTATCCGTTTCTTGAATAAAATTAAAAAGGTGGGGATAGGAATGACTATTACCTTTGTTCAGTTTTATTTTAATGGAAAGGAATTGCCTTCCG

Coding sequence (CDS)

ATGGCGTCCGTCGCTACTGCTGGATTCATCGCACGATCTTCCTCTTCTTCCTCTTCCTCTTCCTGTATTCGCAATACGAATCGTCCGAAGAAGAATCGGACTTCCTCTAATCAACTTAGGGTTTCTTGTTCTTCTTCTTCTTCCGTCGCCGATCCTTATCGAACTCTTCGGATTCAACCCGGTGCCTCTGAATCCGAAGTCAAAAAAGCCTTCCGACATCTCGCTCTTCAGTATCATCCTGATGTTTGTAGAGGGAGTAATTGTGGCGTGCAGTTTCATCAAATCAACGAAGCTTACGATATTGTGATGAATAACTTAAGAGGTATATCAACGCCAATAGAGACATATGAAACAATATATGATGAAGGGATTGATGAACCGATGAGAGGAATGGGGGATCCAGATTGGGACTTATGGGAAGAATGGATGGGATGGGAAGGAGCAGGAATTCGTGATTATTCATCTCATATTAATCCCTATATTTAA

Protein sequence

MASVATAGFIARSSSSSSSSSCIRNTNRPKKNRTSSNQLRVSCSSSSSVADPYRTLRIQPGASESEVKKAFRHLALQYHPDVCRGSNCGVQFHQINEAYDIVMNNLRGISTPIETYETIYDEGIDEPMRGMGDPDWDLWEEWMGWEGAGIRDYSSHINPYI

Homology

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BLAST of IVF0017872 vs. ExPASy Swiss-Prot
Match: Q9SAG8 (Chaperone protein dnaJ 8, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ATJ8 PE=2 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 1.0e-44
Identity = 93/149 (62.42%), Postives = 109/149 (73.15%), Query Frame = 0


Query: 14  SSSSSSSSCIRNTNRPKKNRTSSNQLRVSCSSSSSVADPYRTLRIQPGASESEVKKAFRH 73
           SS SSSSS  R  N  +KN    N+ +V CSSSSSV DPY+TL+I+P +SE EVKKAFR 
Sbjct: 18  SSFSSSSSSFRLKNSRRKNTKMLNRSKVVCSSSSSVMDPYKTLKIRPDSSEYEVKKAFRQ 77

Query: 74  LALQYHPDVCRGSNCGVQFHQINEAYDIVMNNLRGISTPIETYE--TIYDEGIDEPMRGM 133
           LA +YHPDVCRGSNCGVQF  INEAYDIV+  ++      E +E   +YDEG++    GM
Sbjct: 78  LAKKYHPDVCRGSNCGVQFQTINEAYDIVLKQIKNQMEGTEEFEPFDVYDEGLN----GM 137

Query: 134 GDPDWDLWEEWMGWEGAGIRDYSSHINPY 161
            DPD D WEEWMGWEGAG RDYSSH+NPY
Sbjct: 138 NDPDCDTWEEWMGWEGAGTRDYSSHVNPY 162

[Close]

BLAST of IVF0017872 vs. ExPASy Swiss-Prot
Match: Q8G6C6 (Chaperone protein DnaJ OS=Bifidobacterium longum (strain NCC 2705) OX=206672 GN=dnaJ PE=3 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 3.2e-09
Identity = 38/108 (35.19%), Postives = 55/108 (50.93%), Query Frame = 0


Query: 49  VADPYRTLRIQPGASESEVKKAFRHLALQYHPDVCRGSNCGVQFHQINEAYDIVMNNLRG 108
           +AD Y TL ++ GAS+ E+KKA+R L+ +YHPD+  G     +F ++N AYD++ N    
Sbjct: 1   MADYYETLGVERGASDDEIKKAYRKLSRKYHPDIA-GPEFEDKFKEVNNAYDVLSN---- 60

Query: 109 ISTPIETYETIYDEGID--EPMRGMGDPDWDLWEEWMGWEGAGIRDYS 155
                     +YD G+D   P  G G           G+ GAG  D S
Sbjct: 61  -----PDKRRMYDSGVDPNNPNAGAG-----------GFSGAGFGDMS 87

[Close]

BLAST of IVF0017872 vs. ExPASy Swiss-Prot
Match: O66921 (Chaperone protein DnaJ 2 OS=Aquifex aeolicus (strain VF5) OX=224324 GN=dnaJ2 PE=3 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 3.5e-08
Identity = 25/58 (43.10%), Postives = 38/58 (65.52%), Query Frame = 0


Query: 45  SSSSVADPYRTLRIQPGASESEVKKAFRHLALQYHPDVCRGSNCGVQFHQINEAYDIV 103
           +SS+  D Y  L +   AS+ E+KKA+R L  +YHPD+C+   C  +F +INEAY ++
Sbjct: 2   ASSTKKDYYEILGVPRNASQEEIKKAYRRLVRKYHPDICKKPECEEKFKEINEAYQVL 59

[Close]

BLAST of IVF0017872 vs. ExPASy Swiss-Prot
Match: A7NS65 (Chaperone protein DnaJ OS=Roseiflexus castenholzii (strain DSM 13941 / HLO8) OX=383372 GN=dnaJ PE=3 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 3.5e-08
Identity = 26/52 (50.00%), Postives = 36/52 (69.23%), Query Frame = 0


Query: 51  DPYRTLRIQPGASESEVKKAFRHLALQYHPDVCRGSNCGVQFHQINEAYDIV 103
           D Y  L +Q  AS+ E+KKAFR LA QYHPDV +  +   +F +INEAY+++
Sbjct: 6   DYYEVLGVQRNASQDEIKKAFRRLARQYHPDVNKAPDAEAKFKEINEAYEVL 57

[Close]

BLAST of IVF0017872 vs. ExPASy Swiss-Prot
Match: A5UYW4 (Chaperone protein DnaJ OS=Roseiflexus sp. (strain RS-1) OX=357808 GN=dnaJ PE=3 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 3.5e-08
Identity = 26/52 (50.00%), Postives = 36/52 (69.23%), Query Frame = 0


Query: 51  DPYRTLRIQPGASESEVKKAFRHLALQYHPDVCRGSNCGVQFHQINEAYDIV 103
           D Y  L +Q  AS+ E+KKAFR LA QYHPDV +  +   +F +INEAY+++
Sbjct: 6   DYYEVLGVQRNASQDEIKKAFRRLARQYHPDVNKAPDAEAKFKEINEAYEVL 57

[Close]

BLAST of IVF0017872 vs. ExPASy TrEMBL
Match: A0A5D3DUL4 (Chaperone protein dnaJ 8 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold901G00100 PE=4 SV=1)

HSP 1 Score: 326.6 bits (836), Expect = 5.7e-86
Identity = 161/161 (100.00%), Postives = 161/161 (100.00%), Query Frame = 0


Query: 1   MASVATAGFIARSSSSSSSSSCIRNTNRPKKNRTSSNQLRVSCSSSSSVADPYRTLRIQP 60
           MASVATAGFIARSSSSSSSSSCIRNTNRPKKNRTSSNQLRVSCSSSSSVADPYRTLRIQP
Sbjct: 1   MASVATAGFIARSSSSSSSSSCIRNTNRPKKNRTSSNQLRVSCSSSSSVADPYRTLRIQP 60

Query: 61  GASESEVKKAFRHLALQYHPDVCRGSNCGVQFHQINEAYDIVMNNLRGISTPIETYETIY 120
           GASESEVKKAFRHLALQYHPDVCRGSNCGVQFHQINEAYDIVMNNLRGISTPIETYETIY
Sbjct: 61  GASESEVKKAFRHLALQYHPDVCRGSNCGVQFHQINEAYDIVMNNLRGISTPIETYETIY 120

Query: 121 DEGIDEPMRGMGDPDWDLWEEWMGWEGAGIRDYSSHINPYI 162
           DEGIDEPMRGMGDPDWDLWEEWMGWEGAGIRDYSSHINPYI
Sbjct: 121 DEGIDEPMRGMGDPDWDLWEEWMGWEGAGIRDYSSHINPYI 161

[Close]

BLAST of IVF0017872 vs. ExPASy TrEMBL
Match: A0A1S3CPN7 (chaperone protein dnaJ 8, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103502812 PE=4 SV=1)

HSP 1 Score: 326.6 bits (836), Expect = 5.7e-86
Identity = 161/161 (100.00%), Postives = 161/161 (100.00%), Query Frame = 0


Query: 1   MASVATAGFIARSSSSSSSSSCIRNTNRPKKNRTSSNQLRVSCSSSSSVADPYRTLRIQP 60
           MASVATAGFIARSSSSSSSSSCIRNTNRPKKNRTSSNQLRVSCSSSSSVADPYRTLRIQP
Sbjct: 1   MASVATAGFIARSSSSSSSSSCIRNTNRPKKNRTSSNQLRVSCSSSSSVADPYRTLRIQP 60

Query: 61  GASESEVKKAFRHLALQYHPDVCRGSNCGVQFHQINEAYDIVMNNLRGISTPIETYETIY 120
           GASESEVKKAFRHLALQYHPDVCRGSNCGVQFHQINEAYDIVMNNLRGISTPIETYETIY
Sbjct: 61  GASESEVKKAFRHLALQYHPDVCRGSNCGVQFHQINEAYDIVMNNLRGISTPIETYETIY 120

Query: 121 DEGIDEPMRGMGDPDWDLWEEWMGWEGAGIRDYSSHINPYI 162
           DEGIDEPMRGMGDPDWDLWEEWMGWEGAGIRDYSSHINPYI
Sbjct: 121 DEGIDEPMRGMGDPDWDLWEEWMGWEGAGIRDYSSHINPYI 161

[Close]

BLAST of IVF0017872 vs. ExPASy TrEMBL
Match: A0A6J1GC69 (chaperone protein dnaJ 8, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111452806 PE=4 SV=1)

HSP 1 Score: 257.7 bits (657), Expect = 3.3e-65
Identity = 135/164 (82.32%), Postives = 144/164 (87.80%), Query Frame = 0


Query: 1   MASVATAGFIARSSSSSSSSSCIRNTNRPKK-NRTSSNQLRVSCS--SSSSVADPYRTLR 60
           MASV+TAGFIAR    + SSS IR  NR  K +R+S NQ+R S S  SSSS+ADPYRTLR
Sbjct: 1   MASVSTAGFIAR----TGSSSWIRQRNRANKLHRSSRNQVRASYSSYSSSSMADPYRTLR 60

Query: 61  IQPGASESEVKKAFRHLALQYHPDVCRGSNCGVQFHQINEAYDIVMNNLRGISTPIETYE 120
           IQPGASESEVKKAFR LALQYHPDVC+GSNCGVQFHQINEAYDIVMNNLRGIS PIETY+
Sbjct: 61  IQPGASESEVKKAFRQLALQYHPDVCKGSNCGVQFHQINEAYDIVMNNLRGISMPIETYD 120

Query: 121 TIYDEGIDEPMRGMGDPDWDLWEEWMGWEGAGIRDYSSHINPYI 162
           T YD+G DEPMRGMGDPDWDLWEEWMGWEGAGIRDYSSHINPYI
Sbjct: 121 T-YDDGGDEPMRGMGDPDWDLWEEWMGWEGAGIRDYSSHINPYI 159

[Close]

BLAST of IVF0017872 vs. ExPASy TrEMBL
Match: A0A6J1DIS3 (chaperone protein dnaJ 8, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111020908 PE=4 SV=1)

HSP 1 Score: 253.4 bits (646), Expect = 6.1e-64
Identity = 131/163 (80.37%), Postives = 140/163 (85.89%), Query Frame = 0


Query: 1   MASVATAGFIARSSSSSSSSSCIRNTNRPKKNRTSSNQLRVSCSSSSS--VADPYRTLRI 60
           MAS ATAG + R  ++SSSSS IR  NR K +RTS N LRVSCSSSSS  + DPY+TLRI
Sbjct: 1   MASAATAGILGR--NASSSSSWIRQRNRQKNDRTSRNSLRVSCSSSSSSYLTDPYQTLRI 60

Query: 61  QPGASESEVKKAFRHLALQYHPDVCRGSNCGVQFHQINEAYDIVMNNLRGISTPIETYET 120
           QPGASESEVKKAFR LALQYHPDVCRGSNCGVQFHQINEAYD+VMNNLRGISTPIETY+ 
Sbjct: 61  QPGASESEVKKAFRRLALQYHPDVCRGSNCGVQFHQINEAYDMVMNNLRGISTPIETYDE 120

Query: 121 IYDEGIDEPMRGMGDPDWDLWEEWMGWEGAGIRDYSSHINPYI 162
            Y E   EPMRGM DPDWD+WEEWMGWEGAGIRDYSSHINPYI
Sbjct: 121 SYAE---EPMRGMEDPDWDMWEEWMGWEGAGIRDYSSHINPYI 158

[Close]

BLAST of IVF0017872 vs. ExPASy TrEMBL
Match: A0A6J1F1M8 (chaperone protein dnaJ 8, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111441378 PE=4 SV=1)

HSP 1 Score: 251.1 bits (640), Expect = 3.0e-63
Identity = 132/163 (80.98%), Postives = 145/163 (88.96%), Query Frame = 0


Query: 1   MASVATAGF-IARSSSSSSSSS-CIRNTNRPKKNRTSSNQLRVSCSSSSSVADPYRTLRI 60
           MASVATAG  IAR+ SSSSSSS  IR+ NR  K+R+S N++RV+C  SSS+ DPY+TLRI
Sbjct: 1   MASVATAGISIARTGSSSSSSSFWIRHRNRSNKDRSSRNRVRVTC--SSSLLDPYQTLRI 60

Query: 61  QPGASESEVKKAFRHLALQYHPDVCRGSNCGVQFHQINEAYDIVMNNLRGISTPIETYET 120
           QPGASESEVKKAFR LALQYHPDVCRGSNCGVQFHQINEAYDIVMNNLRGISTPIET E+
Sbjct: 61  QPGASESEVKKAFRRLALQYHPDVCRGSNCGVQFHQINEAYDIVMNNLRGISTPIETRES 120

Query: 121 IYDEGIDEPMRGMGDPDWDLWEEWMGWEGAGIRDYSSHINPYI 162
             +EG+DE MRGM DPDW+LWEEWMGWEGAGIRDYSSHINPYI
Sbjct: 121 C-EEGVDEEMRGMDDPDWELWEEWMGWEGAGIRDYSSHINPYI 160

[Close]

BLAST of IVF0017872 vs. NCBI nr
Match: XP_008465135.1 (PREDICTED: chaperone protein dnaJ 8, chloroplastic [Cucumis melo] >TYK27005.1 chaperone protein dnaJ 8 [Cucumis melo var. makuwa])

HSP 1 Score: 325 bits (833), Expect = 3.62e-112
Identity = 161/161 (100.00%), Postives = 161/161 (100.00%), Query Frame = 0


Query: 1   MASVATAGFIARSSSSSSSSSCIRNTNRPKKNRTSSNQLRVSCSSSSSVADPYRTLRIQP 60
           MASVATAGFIARSSSSSSSSSCIRNTNRPKKNRTSSNQLRVSCSSSSSVADPYRTLRIQP
Sbjct: 1   MASVATAGFIARSSSSSSSSSCIRNTNRPKKNRTSSNQLRVSCSSSSSVADPYRTLRIQP 60

Query: 61  GASESEVKKAFRHLALQYHPDVCRGSNCGVQFHQINEAYDIVMNNLRGISTPIETYETIY 120
           GASESEVKKAFRHLALQYHPDVCRGSNCGVQFHQINEAYDIVMNNLRGISTPIETYETIY
Sbjct: 61  GASESEVKKAFRHLALQYHPDVCRGSNCGVQFHQINEAYDIVMNNLRGISTPIETYETIY 120

Query: 121 DEGIDEPMRGMGDPDWDLWEEWMGWEGAGIRDYSSHINPYI 161
           DEGIDEPMRGMGDPDWDLWEEWMGWEGAGIRDYSSHINPYI
Sbjct: 121 DEGIDEPMRGMGDPDWDLWEEWMGWEGAGIRDYSSHINPYI 161

[Close]

BLAST of IVF0017872 vs. NCBI nr
Match: XP_038906426.1 (chaperone protein dnaJ 8, chloroplastic [Benincasa hispida])

HSP 1 Score: 286 bits (732), Expect = 9.76e-97
Identity = 148/165 (89.70%), Postives = 154/165 (93.33%), Query Frame = 0


Query: 1   MASVATAGFIARSSSSSSSSSCIRNTNRPKKNRTSSNQLRVSCSSSSS----VADPYRTL 60
           MASVATAGFIARS SSSSSS  IR+ NRPKK+++S+NQLRVSCSSSSS    V DPYRTL
Sbjct: 1   MASVATAGFIARSGSSSSSS-WIRHRNRPKKDQSSTNQLRVSCSSSSSSPSSVVDPYRTL 60

Query: 61  RIQPGASESEVKKAFRHLALQYHPDVCRGSNCGVQFHQINEAYDIVMNNLRGISTPIETY 120
           RIQPGASESEVKKAFRHLALQYHPDVCRGSNCGVQFHQINEAYDIVMNNLRGISTPIETY
Sbjct: 61  RIQPGASESEVKKAFRHLALQYHPDVCRGSNCGVQFHQINEAYDIVMNNLRGISTPIETY 120

Query: 121 ETIYDEGIDEPMRGMGDPDWDLWEEWMGWEGAGIRDYSSHINPYI 161
           ET YDEG+DEPMRGM DPDWDLWEEWMGWEGAGIRDYSSHINPYI
Sbjct: 121 ET-YDEGVDEPMRGMEDPDWDLWEEWMGWEGAGIRDYSSHINPYI 163

[Close]

BLAST of IVF0017872 vs. NCBI nr
Match: XP_023525914.1 (chaperone protein dnaJ 8, chloroplastic-like [Cucurbita pepo subsp. pepo] >KAG6606847.1 Chaperone protein dnaJ 8, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia] >KAG7036551.1 Chaperone protein dnaJ 8, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 257 bits (656), Expect = 3.27e-85
Identity = 136/164 (82.93%), Postives = 144/164 (87.80%), Query Frame = 0


Query: 1   MASVATAGFIARSSSSSSSSSCIRNTNRPKK-NRTSSNQLRVSCSS--SSSVADPYRTLR 60
           MASV+TAGFIAR+ SSS     IR  NR  K +R+S NQ+R S SS  SSS+ADPYRTLR
Sbjct: 1   MASVSTAGFIARTGSSS----WIRQRNRANKLHRSSRNQVRASYSSYSSSSMADPYRTLR 60

Query: 61  IQPGASESEVKKAFRHLALQYHPDVCRGSNCGVQFHQINEAYDIVMNNLRGISTPIETYE 120
           IQPGASESEVKKAFR LALQYHPDVC+GSNCGVQFHQINEAYDIVMNNLRGIS PIETYE
Sbjct: 61  IQPGASESEVKKAFRQLALQYHPDVCKGSNCGVQFHQINEAYDIVMNNLRGISMPIETYE 120

Query: 121 TIYDEGIDEPMRGMGDPDWDLWEEWMGWEGAGIRDYSSHINPYI 161
           T YD+G DEPMRGMGDPDWDLWEEWMGWEGAGIRDYSSHINPYI
Sbjct: 121 T-YDDGGDEPMRGMGDPDWDLWEEWMGWEGAGIRDYSSHINPYI 159

[Close]

BLAST of IVF0017872 vs. NCBI nr
Match: XP_022949473.1 (chaperone protein dnaJ 8, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 256 bits (653), Expect = 9.36e-85
Identity = 135/164 (82.32%), Postives = 144/164 (87.80%), Query Frame = 0


Query: 1   MASVATAGFIARSSSSSSSSSCIRNTNRPKK-NRTSSNQLRVSCSS--SSSVADPYRTLR 60
           MASV+TAGFIAR+ SSS     IR  NR  K +R+S NQ+R S SS  SSS+ADPYRTLR
Sbjct: 1   MASVSTAGFIARTGSSS----WIRQRNRANKLHRSSRNQVRASYSSYSSSSMADPYRTLR 60

Query: 61  IQPGASESEVKKAFRHLALQYHPDVCRGSNCGVQFHQINEAYDIVMNNLRGISTPIETYE 120
           IQPGASESEVKKAFR LALQYHPDVC+GSNCGVQFHQINEAYDIVMNNLRGIS PIETY+
Sbjct: 61  IQPGASESEVKKAFRQLALQYHPDVCKGSNCGVQFHQINEAYDIVMNNLRGISMPIETYD 120

Query: 121 TIYDEGIDEPMRGMGDPDWDLWEEWMGWEGAGIRDYSSHINPYI 161
           T YD+G DEPMRGMGDPDWDLWEEWMGWEGAGIRDYSSHINPYI
Sbjct: 121 T-YDDGGDEPMRGMGDPDWDLWEEWMGWEGAGIRDYSSHINPYI 159

[Close]

BLAST of IVF0017872 vs. NCBI nr
Match: XP_022153397.1 (chaperone protein dnaJ 8, chloroplastic [Momordica charantia])

HSP 1 Score: 251 bits (642), Expect = 4.29e-83
Identity = 131/163 (80.37%), Postives = 140/163 (85.89%), Query Frame = 0


Query: 1   MASVATAGFIARSSSSSSSSSCIRNTNRPKKNRTSSNQLRVSCSSSSS--VADPYRTLRI 60
           MAS ATAG + R++SSSSS   IR  NR K +RTS N LRVSCSSSSS  + DPY+TLRI
Sbjct: 1   MASAATAGILGRNASSSSS--WIRQRNRQKNDRTSRNSLRVSCSSSSSSYLTDPYQTLRI 60

Query: 61  QPGASESEVKKAFRHLALQYHPDVCRGSNCGVQFHQINEAYDIVMNNLRGISTPIETYET 120
           QPGASESEVKKAFR LALQYHPDVCRGSNCGVQFHQINEAYD+VMNNLRGISTPIETY+ 
Sbjct: 61  QPGASESEVKKAFRRLALQYHPDVCRGSNCGVQFHQINEAYDMVMNNLRGISTPIETYDE 120

Query: 121 IYDEGIDEPMRGMGDPDWDLWEEWMGWEGAGIRDYSSHINPYI 161
            Y E   EPMRGM DPDWD+WEEWMGWEGAGIRDYSSHINPYI
Sbjct: 121 SYAE---EPMRGMEDPDWDMWEEWMGWEGAGIRDYSSHINPYI 158

[Close]

BLAST of IVF0017872 vs. TAIR 10
Match: AT1G80920.1 (Chaperone DnaJ-domain superfamily protein )

HSP 1 Score: 181.0 bits (458), Expect = 7.5e-46
Identity = 93/149 (62.42%), Postives = 109/149 (73.15%), Query Frame = 0


Query: 14  SSSSSSSSCIRNTNRPKKNRTSSNQLRVSCSSSSSVADPYRTLRIQPGASESEVKKAFRH 73
           SS SSSSS  R  N  +KN    N+ +V CSSSSSV DPY+TL+I+P +SE EVKKAFR 
Sbjct: 18  SSFSSSSSSFRLKNSRRKNTKMLNRSKVVCSSSSSVMDPYKTLKIRPDSSEYEVKKAFRQ 77

Query: 74  LALQYHPDVCRGSNCGVQFHQINEAYDIVMNNLRGISTPIETYE--TIYDEGIDEPMRGM 133
           LA +YHPDVCRGSNCGVQF  INEAYDIV+  ++      E +E   +YDEG++    GM
Sbjct: 78  LAKKYHPDVCRGSNCGVQFQTINEAYDIVLKQIKNQMEGTEEFEPFDVYDEGLN----GM 137

Query: 134 GDPDWDLWEEWMGWEGAGIRDYSSHINPY 161
            DPD D WEEWMGWEGAG RDYSSH+NPY
Sbjct: 138 NDPDCDTWEEWMGWEGAGTRDYSSHVNPY 162

[Close]

BLAST of IVF0017872 vs. TAIR 10
Match: AT1G72070.1 (Chaperone DnaJ-domain superfamily protein )

HSP 1 Score: 62.4 bits (150), Expect = 3.9e-10
Identity = 37/95 (38.95%), Postives = 52/95 (54.74%), Query Frame = 0


Query: 53  YRTLRIQPGASESEVKKAFRHLALQYHPDVCRGSNCGVQFHQINEAYDIVMNNLRGISTP 112
           Y  L + P AS++EVK+AF+ LAL+YHPDV +G +    F +I  AY+ +M   +     
Sbjct: 41  YTVLGLTPLASQTEVKRAFKRLALKYHPDVHKGQD--KDFKEIKSAYECLMQKFKKEEEE 100

Query: 113 IETYETIYDEGIDEPMRGMGDPDWDLWEEWMGWEG 148
           +E  E             MG  + D WEEWMG+EG
Sbjct: 101 MEITE-------------MG--EIDEWEEWMGFEG 118

[Close]

BLAST of IVF0017872 vs. TAIR 10
Match: AT5G59610.1 (Chaperone DnaJ-domain superfamily protein )

HSP 1 Score: 60.5 bits (145), Expect = 1.5e-09
Identity = 37/127 (29.13%), Postives = 63/127 (49.61%), Query Frame = 0


Query: 31  KNRTSSNQLRVSCSSSSSVADPYRTLRIQPGASESEVKKAFRHLALQYHPDVCRGSNCGV 90
           K R+S  + R     + + + PY  L + P A+  ++K+A+R LAL+YHPDV + +N   
Sbjct: 53  KRRSSIQRRRNRIFVTRARSSPYEILGVSPSATPQDIKRAYRKLALKYHPDVNKEANAQE 112

Query: 91  QFHQINEAYDIVMN---------NLRGISTPIETYETIYDEGIDEPMRGMGDPDWDLWEE 149
           +F +I  AY  ++N         + R   +         +  ++E   G+GD   DL EE
Sbjct: 113 KFLKIKHAYTTLINSDSRRKYGSDSRATGSSTGQTSRKGNSQVEEDFYGLGDFFKDLQEE 172

[Close]

BLAST of IVF0017872 vs. TAIR 10
Match: AT3G05345.1 (Chaperone DnaJ-domain superfamily protein )

HSP 1 Score: 52.4 bits (124), Expect = 4.0e-07
Identity = 26/61 (42.62%), Postives = 37/61 (60.66%), Query Frame = 0


Query: 48  SVADPYRTLRIQPGASESEVKKAFRHLALQYHPDVCR-GSNCGVQFHQINEAYDIVMNNL 107
           S + PY  L ++P  S SE+K AFR    QYHPDV + GSN  +   +I +AY+++ N  
Sbjct: 41  SSSSPYSILGVEPSCSSSELKAAFRAKVKQYHPDVNKDGSNSDIMIRRIIQAYEMLTNYS 100

[Close]

BLAST of IVF0017872 vs. TAIR 10
Match: AT5G59610.2 (Chaperone DnaJ-domain superfamily protein )

HSP 1 Score: 52.4 bits (124), Expect = 4.0e-07
Identity = 26/75 (34.67%), Postives = 45/75 (60.00%), Query Frame = 0


Query: 31  KNRTSSNQLRVSCSSSSSVADPYRTLRIQPGASESEVKKAFRHLALQYHPDVCRGSNCGV 90
           K R+S  + R     + + + PY  L + P A+  ++K+A+R LAL+YHPDV + +N   
Sbjct: 53  KRRSSIQRRRNRIFVTRARSSPYEILGVSPSATPQDIKRAYRKLALKYHPDVNKEANAQE 112

Query: 91  QFHQINEAYDIVMNN 106
           +F +I  AY  ++N+
Sbjct: 113 KFLKIKHAYTTLINS 127

The following BLAST results are available for this feature:

BLAST of IVF0017872 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SAG8	1.0e-44	62.42	Chaperone protein dnaJ 8, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ATJ8 ...	[more]
Q8G6C6	3.2e-09	35.19	Chaperone protein DnaJ OS=Bifidobacterium longum (strain NCC 2705) OX=206672 GN=...	[more]
O66921	3.5e-08	43.10	Chaperone protein DnaJ 2 OS=Aquifex aeolicus (strain VF5) OX=224324 GN=dnaJ2 PE=...	[more]
A7NS65	3.5e-08	50.00	Chaperone protein DnaJ OS=Roseiflexus castenholzii (strain DSM 13941 / HLO8) OX=...	[more]
A5UYW4	3.5e-08	50.00	Chaperone protein DnaJ OS=Roseiflexus sp. (strain RS-1) OX=357808 GN=dnaJ PE=3 S...	[more]

BLAST of IVF0017872 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DUL4	5.7e-86	100.00	Chaperone protein dnaJ 8 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
A0A1S3CPN7	5.7e-86	100.00	chaperone protein dnaJ 8, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103502812 ...	[more]
A0A6J1GC69	3.3e-65	82.32	chaperone protein dnaJ 8, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LO...	[more]
A0A6J1DIS3	6.1e-64	80.37	chaperone protein dnaJ 8, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111...	[more]
A0A6J1F1M8	3.0e-63	80.98	chaperone protein dnaJ 8, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LO...	[more]

BLAST of IVF0017872 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008465135.1	3.62e-112	100.00	PREDICTED: chaperone protein dnaJ 8, chloroplastic [Cucumis melo] >TYK27005.1 ch...	[more]
XP_038906426.1	9.76e-97	89.70	chaperone protein dnaJ 8, chloroplastic [Benincasa hispida]	[more]
XP_023525914.1	3.27e-85	82.93	chaperone protein dnaJ 8, chloroplastic-like [Cucurbita pepo subsp. pepo] >KAG66...	[more]
XP_022949473.1	9.36e-85	82.32	chaperone protein dnaJ 8, chloroplastic-like [Cucurbita moschata]	[more]
XP_022153397.1	4.29e-83	80.37	chaperone protein dnaJ 8, chloroplastic [Momordica charantia]	[more]

BLAST of IVF0017872 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G80920.1	7.5e-46	62.42	Chaperone DnaJ-domain superfamily protein	[more]
AT1G72070.1	3.9e-10	38.95	Chaperone DnaJ-domain superfamily protein	[more]
AT5G59610.1	1.5e-09	29.13	Chaperone DnaJ-domain superfamily protein	[more]
AT3G05345.1	4.0e-07	42.62	Chaperone DnaJ-domain superfamily protein	[more]
AT5G59610.2	4.0e-07	34.67	Chaperone DnaJ-domain superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001623	DnaJ domain	PRINTS	PR00625	JDOMAIN	coord: 71..86 score: 44.07 coord: 87..107 score: 23.18 coord: 53..71 score: 39.56
IPR001623	DnaJ domain	SMART	SM00271	dnaj_3	coord: 50..107 e-value: 1.6E-16 score: 70.9
IPR001623	DnaJ domain	PFAM	PF00226	DnaJ	coord: 51..104 e-value: 1.2E-14 score: 54.2
IPR001623	DnaJ domain	PROSITE	PS50076	DNAJ_2	coord: 51..124 score: 13.800029
IPR001623	DnaJ domain	CDD	cd06257	DnaJ	coord: 51..101 e-value: 3.59687E-16 score: 66.4149
IPR036869	Chaperone J-domain superfamily	GENE3D	1.10.287.110	DnaJ domain	coord: 20..108 e-value: 3.3E-18 score: 67.4
IPR036869	Chaperone J-domain superfamily	SUPERFAMILY	46565	Chaperone J-domain	coord: 48..148
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 13..41
None	No IPR available	PANTHER	PTHR24074:SF37	HEAT SHOCK PROTEIN BINDING PROTEIN	coord: 5..161
None	No IPR available	PANTHER	PTHR24074	CO-CHAPERONE PROTEIN DJLA	coord: 5..161

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0017872.1	IVF0017872.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009416	response to light stimulus
cellular_component	GO:0009570	chloroplast stroma
cellular_component	GO:0005634	nucleus