IVF0017651 (gene) Melon (IVF77) v1

Overview
NameIVF0017651
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionVQ domain-containing protein
Locationchr08: 979190 .. 979498 (+)
RNA-Seq ExpressionIVF0017651
SyntenyIVF0017651
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGAAACCCTAAGAAGACGGCGGAAGTGAGGGTGGTGCTAATTGAGTACCACCACATTCAAACCGACGCTTCCAACTTCAAGTCCGTCGTTCAAAGTCTCACCGGAAAGCATTCCTCCACAGCAGAGGACGGAGGTGAAATCTGCAGGAAGAGGCAGAGAGTGGTGGCTCGGAATAATAATGAGAGTATAATTAATATTAATCAAAGTGTTAAGATGATCCATACCGCGTCGTTTAAGGACTTGGATCGCTTGCTCTCCCTTGAACTTCCTTCCATGGAAGATCTTGACTGGATTCTCACTGATTAA

mRNA sequence

ATGGGAAACCCTAAGAAGACGGCGGAAGTGAGGGTGGTGCTAATTGAGTACCACCACATTCAAACCGACGCTTCCAACTTCAAGTCCGTCGTTCAAAGTCTCACCGGAAAGCATTCCTCCACAGCAGAGGACGGAGGTGAAATCTGCAGGAAGAGGCAGAGAGTGGTGGCTCGGAATAATAATGAGAGTATAATTAATATTAATCAAAGTGTTAAGATGATCCATACCGCGTCGTTTAAGGACTTGGATCGCTTGCTCTCCCTTGAACTTCCTTCCATGGAAGATCTTGACTGGATTCTCACTGATTAA

Coding sequence (CDS)

ATGGGAAACCCTAAGAAGACGGCGGAAGTGAGGGTGGTGCTAATTGAGTACCACCACATTCAAACCGACGCTTCCAACTTCAAGTCCGTCGTTCAAAGTCTCACCGGAAAGCATTCCTCCACAGCAGAGGACGGAGGTGAAATCTGCAGGAAGAGGCAGAGAGTGGTGGCTCGGAATAATAATGAGAGTATAATTAATATTAATCAAAGTGTTAAGATGATCCATACCGCGTCGTTTAAGGACTTGGATCGCTTGCTCTCCCTTGAACTTCCTTCCATGGAAGATCTTGACTGGATTCTCACTGATTAA

Protein sequence

MGNPKKTAEVRVVLIEYHHIQTDASNFKSVVQSLTGKHSSTAEDGGEICRKRQRVVARNNNESIININQSVKMIHTASFKDLDRLLSLELPSMEDLDWILTD
Homology
BLAST of IVF0017651 vs. ExPASy TrEMBL
Match: A0A5D3CN21 (VQ motif-containing protein 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G009060 PE=4 SV=1)

HSP 1 Score: 201.4 bits (511), Expect = 1.8e-48
Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 0

Query: 1   MGNPKKTAEVRVVLIEYHHIQTDASNFKSVVQSLTGKHSSTAEDGGEICRKRQRVVARNN 60
           MGNPKKTAEVRVVLIEYHHIQTDASNFKSVVQSLTGKHSSTAEDGGEICRKRQRVVARNN
Sbjct: 1   MGNPKKTAEVRVVLIEYHHIQTDASNFKSVVQSLTGKHSSTAEDGGEICRKRQRVVARNN 60

Query: 61  NESIININQSVKMIHTASFKDLDRLLSLELPSMEDLDWILTD 103
           NESIININQSVKMIHTASFKDLDRLLSLELPSMEDLDWILTD
Sbjct: 61  NESIININQSVKMIHTASFKDLDRLLSLELPSMEDLDWILTD 102

BLAST of IVF0017651 vs. ExPASy TrEMBL
Match: A0A0A0KNW8 (VQ domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G523420 PE=4 SV=1)

HSP 1 Score: 173.7 bits (439), Expect = 3.9e-40
Identity = 92/104 (88.46%), Postives = 96/104 (92.31%), Query Frame = 0

Query: 1   MGNPKKTAEVRVVLIEYHHIQTDASNFKSVVQSLTGKHSSTAE-DGGEICRKRQRVVARN 60
           MGN KKTAEVRVVLIEYHHIQTDASNFKSVVQSLTGKHS  AE DGGEICRKRQRVV++N
Sbjct: 21  MGNSKKTAEVRVVLIEYHHIQTDASNFKSVVQSLTGKHSPAAEDDGGEICRKRQRVVSQN 80

Query: 61  NN-ESIININQSVKMIHTASFKDLDRLLSLELPSMEDLDWILTD 103
           NN ESI NINQ VKMIHT SFKDLDRLL+LELPSMEDL+WILTD
Sbjct: 81  NNHESITNINQRVKMIHTKSFKDLDRLLALELPSMEDLNWILTD 124

BLAST of IVF0017651 vs. ExPASy TrEMBL
Match: A0A6J1CYB0 (uncharacterized protein LOC111015700 OS=Momordica charantia OX=3673 GN=LOC111015700 PE=4 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 1.1e-15
Identity = 56/107 (52.34%), Postives = 70/107 (65.42%), Query Frame = 0

Query: 6   KTAEVRVVLIEYHHIQTDASNFKSVVQSLTG--KHSSTA------EDGGEICRKRQRVVA 65
           K+A V+VVLIEYHH+QTD SNFKSVVQSLTG  K SS+A        G    R+R+ + +
Sbjct: 3   KSAPVKVVLIEYHHVQTDVSNFKSVVQSLTGNAKRSSSALPDTSFPAGDTTKRRRRDLDS 62

Query: 66  RNNNESIININQSVKM--IHTASFKDLDRLLSLELPSMEDLDWILTD 103
              N++II    +     +HT SFKDLDRLL   LPS++DLDWI  D
Sbjct: 63  AAANQTIIQTTATTTPFDLHTMSFKDLDRLLKFNLPSVQDLDWIWAD 109

BLAST of IVF0017651 vs. ExPASy TrEMBL
Match: A0A6J1KT83 (VQ motif-containing protein 10 OS=Cucurbita maxima OX=3661 GN=LOC111497400 PE=4 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 3.1e-13
Identity = 53/111 (47.75%), Postives = 65/111 (58.56%), Query Frame = 0

Query: 1   MGNPKKTAEVRVVLIEYHHIQTDASNFKSVVQSLTGKHSSTAEDGGEICRKRQRV----- 60
           M N K    V+VV IEYHHIQTD SNFKSVVQ+LTG +S+     G   RK+ RV     
Sbjct: 1   MANSKAAGPVKVVFIEYHHIQTDVSNFKSVVQTLTGMNST----AGGNTRKKPRVDENII 60

Query: 61  ---VARNNNESIININQSVKMIHTASFKDLD-RLLSLELPSMEDLDWILTD 103
               AR    ++     +   + + SF+DLD  LL LELPSMEDL+WI  D
Sbjct: 61  DVRSARFEESTVSCETDTTSSVQSTSFEDLDPLLLKLELPSMEDLNWIWAD 107

BLAST of IVF0017651 vs. ExPASy TrEMBL
Match: A0A6J1EF02 (VQ motif-containing protein 10-like OS=Cucurbita moschata OX=3662 GN=LOC111433561 PE=4 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 2.6e-12
Identity = 52/111 (46.85%), Postives = 65/111 (58.56%), Query Frame = 0

Query: 1   MGNPKKTAEVRVVLIEYHHIQTDASNFKSVVQSLTGKHSSTAEDGGEICRKRQRV----- 60
           M N K    V+VV IEYHHIQTD +NFKSVVQ+LTG +S+     G   RK++RV     
Sbjct: 1   MANSKAAGPVKVVFIEYHHIQTDVTNFKSVVQTLTGMNST----AGGNTRKKRRVDENII 60

Query: 61  ---VARNNNESIININQSVKMIHTASFKDLD-RLLSLELPSMEDLDWILTD 103
               AR    +      +   + + SF+DLD  LL LELPSMEDL+WI  D
Sbjct: 61  DARSARFEESTESCETDTTSSLQSTSFEDLDPLLLKLELPSMEDLNWIWAD 107

BLAST of IVF0017651 vs. NCBI nr
Match: KAA0052539.1 (VQ motif-containing protein 1-like [Cucumis melo var. makuwa] >TYK13287.1 VQ motif-containing protein 1-like [Cucumis melo var. makuwa])

HSP 1 Score: 203 bits (516), Expect = 1.00e-65
Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 0

Query: 1   MGNPKKTAEVRVVLIEYHHIQTDASNFKSVVQSLTGKHSSTAEDGGEICRKRQRVVARNN 60
           MGNPKKTAEVRVVLIEYHHIQTDASNFKSVVQSLTGKHSSTAEDGGEICRKRQRVVARNN
Sbjct: 1   MGNPKKTAEVRVVLIEYHHIQTDASNFKSVVQSLTGKHSSTAEDGGEICRKRQRVVARNN 60

Query: 61  NESIININQSVKMIHTASFKDLDRLLSLELPSMEDLDWILTD 102
           NESIININQSVKMIHTASFKDLDRLLSLELPSMEDLDWILTD
Sbjct: 61  NESIININQSVKMIHTASFKDLDRLLSLELPSMEDLDWILTD 102

BLAST of IVF0017651 vs. NCBI nr
Match: KGN49401.1 (hypothetical protein Csa_003856 [Cucumis sativus])

HSP 1 Score: 175 bits (444), Expect = 1.93e-54
Identity = 92/104 (88.46%), Postives = 96/104 (92.31%), Query Frame = 0

Query: 1   MGNPKKTAEVRVVLIEYHHIQTDASNFKSVVQSLTGKHSSTAED-GGEICRKRQRVVARN 60
           MGN KKTAEVRVVLIEYHHIQTDASNFKSVVQSLTGKHS  AED GGEICRKRQRVV++N
Sbjct: 21  MGNSKKTAEVRVVLIEYHHIQTDASNFKSVVQSLTGKHSPAAEDDGGEICRKRQRVVSQN 80

Query: 61  NN-ESIININQSVKMIHTASFKDLDRLLSLELPSMEDLDWILTD 102
           NN ESI NINQ VKMIHT SFKDLDRLL+LELPSMEDL+WILTD
Sbjct: 81  NNHESITNINQRVKMIHTKSFKDLDRLLALELPSMEDLNWILTD 124

BLAST of IVF0017651 vs. NCBI nr
Match: XP_038881537.1 (VQ motif-containing protein 10-like [Benincasa hispida])

HSP 1 Score: 149 bits (377), Expect = 2.09e-44
Identity = 84/112 (75.00%), Postives = 89/112 (79.46%), Query Frame = 0

Query: 1   MGNPKKTA--EVRVVLIEYHHIQTDASNFKSVVQSLTGKHSSTAEDGGEICRKRQRVVAR 60
           MGN KKTA  EVRVV+IEYHHIQTD SNFKSVVQSLTGKHSS  E GGE C+KRQRVVA 
Sbjct: 1   MGNSKKTATAEVRVVVIEYHHIQTDVSNFKSVVQSLTGKHSSAVEGGGESCKKRQRVVAE 60

Query: 61  NNNESIININ--------QSVKMIHTASFKDLDRLLSLELPSMEDLDWILTD 102
           NN ESIINI+        +S KMI T SFKDLDRLLSL LPSMEDL+WI TD
Sbjct: 61  NN-ESIINIDFNDGRRYEESRKMIPTTSFKDLDRLLSLHLPSMEDLNWIWTD 111

BLAST of IVF0017651 vs. NCBI nr
Match: KAG7034723.1 (hypothetical protein SDJN02_04453, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 109 bits (273), Expect = 1.00e-28
Identity = 56/104 (53.85%), Postives = 71/104 (68.27%), Query Frame = 0

Query: 1   MGNPKKTAE--VRVVLIEYHHIQTDASNFKSVVQSLTGKHSSTAEDGGEICRKRQRVVAR 60
           M + K T    V+VVLIEYHH+ TD S+FKSVVQ+LTGKHSS  E GG  CRKR RV   
Sbjct: 1   MADSKNTPAGGVKVVLIEYHHVHTDVSSFKSVVQTLTGKHSSAVEGGGGTCRKRPRVEVE 60

Query: 61  NNNESIININQSVKMIHTASFKDLDRLLSLELPSMEDLDWILTD 102
            +      +N++   +H+ SFKDLDR L+L LP++EDL+WI  D
Sbjct: 61  KS-----YMNRTASFLHSTSFKDLDRFLNLHLPALEDLNWIWAD 99

BLAST of IVF0017651 vs. NCBI nr
Match: KAG6581431.1 (hypothetical protein SDJN03_21433, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 108 bits (271), Expect = 2.02e-28
Identity = 56/104 (53.85%), Postives = 70/104 (67.31%), Query Frame = 0

Query: 1   MGNPKKTAE--VRVVLIEYHHIQTDASNFKSVVQSLTGKHSSTAEDGGEICRKRQRVVAR 60
           M + K T    V+VVLIEYHH+ TD SNFKSVVQ+LTGKHSS  E GG  C KR RV   
Sbjct: 1   MADSKNTPAGGVKVVLIEYHHVHTDVSNFKSVVQTLTGKHSSAVEGGGGTCGKRPRVEVE 60

Query: 61  NNNESIININQSVKMIHTASFKDLDRLLSLELPSMEDLDWILTD 102
            +      +N++   +H+ SFKDLDR L+L LP++EDL+WI  D
Sbjct: 61  KS-----YMNRTASFLHSTSFKDLDRFLNLHLPALEDLNWIWAD 99

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5D3CN211.8e-48100.00VQ motif-containing protein 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E56... [more]
A0A0A0KNW83.9e-4088.46VQ domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G523420 PE=4 SV=... [more]
A0A6J1CYB01.1e-1552.34uncharacterized protein LOC111015700 OS=Momordica charantia OX=3673 GN=LOC111015... [more]
A0A6J1KT833.1e-1347.75VQ motif-containing protein 10 OS=Cucurbita maxima OX=3661 GN=LOC111497400 PE=4 ... [more]
A0A6J1EF022.6e-1246.85VQ motif-containing protein 10-like OS=Cucurbita moschata OX=3662 GN=LOC11143356... [more]
Match NameE-valueIdentityDescription
KAA0052539.11.00e-65100.00VQ motif-containing protein 1-like [Cucumis melo var. makuwa] >TYK13287.1 VQ mot... [more]
KGN49401.11.93e-5488.46hypothetical protein Csa_003856 [Cucumis sativus][more]
XP_038881537.12.09e-4475.00VQ motif-containing protein 10-like [Benincasa hispida][more]
KAG7034723.11.00e-2853.85hypothetical protein SDJN02_04453, partial [Cucurbita argyrosperma subsp. argyro... [more]
KAG6581431.12.02e-2853.85hypothetical protein SDJN03_21433, partial [Cucurbita argyrosperma subsp. sorori... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008889VQPFAMPF05678VQcoord: 20..39
e-value: 5.2E-9
score: 35.4
IPR039608VQ motif-containing protein 1/10PANTHERPTHR34777VQ MOTIF-CONTAINING PROTEIN 10coord: 5..101
NoneNo IPR availablePANTHERPTHR34777:SF1VQ MOTIF-CONTAINING PROTEIN 10coord: 5..101

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0017651.2IVF0017651.2mRNA