Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGGAGCTTCGCTAAGTTAAGTGAGAGAGTTAAGGATATGGCAGCAAAGAACAAGGCCACCGAAAAACAAGAAGTAGACTGCCTTGAGGTTGTGGCGAAAGAATTCACAGAAGAAATTGAGAATATGAGTCTATTAGAGACAAGGCTATCGCCTGAAGAACCTAAACTAAGAGAAGCCGCCCAACCTAAGAAAATCGAAAGCAAGTCTGGGACATCAAGACCTAGGGATGCCTAG
mRNA sequence
ATGGGGAGCTTCGCTAAGTTAAGTGAGAGAGTTAAGGATATGGCAGCAAAGAACAAGGCCACCGAAAAACAAGAAGTAGACTGCCTTGAGGTTGTGGCGAAAGAATTCACAGAAGAAATTGAGAATATGAGTCTATTAGAGACAAGGCTATCGCCTGAAGAACCTAAACTAAGAGAAGCCGCCCAACCTAAGAAAATCGAAAGCAAGTCTGGGACATCAAGACCTAGGGATGCCTAG
Coding sequence (CDS)
ATGGGGAGCTTCGCTAAGTTAAGTGAGAGAGTTAAGGATATGGCAGCAAAGAACAAGGCCACCGAAAAACAAGAAGTAGACTGCCTTGAGGTTGTGGCGAAAGAATTCACAGAAGAAATTGAGAATATGAGTCTATTAGAGACAAGGCTATCGCCTGAAGAACCTAAACTAAGAGAAGCCGCCCAACCTAAGAAAATCGAAAGCAAGTCTGGGACATCAAGACCTAGGGATGCCTAG
Protein sequence
MGSFAKLSERVKDMAAKNKATEKQEVDCLEVVAKEFTEEIENMSLLETRLSPEEPKLREAAQPKKIESKSGTSRPRDA
Homology
BLAST of IVF0017571 vs. ExPASy TrEMBL
Match:
A0A5A7TQ54 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold335G00290 PE=4 SV=1)
HSP 1 Score: 83.2 bits (204), Expect = 5.3e-13
Identity = 47/72 (65.28%), Postives = 58/72 (80.56%), Query Frame = 0
Query: 7 LSERVKDMAAKNKATEKQEVDCLEVVAKEFTEEIENMSLLETRLSPEEPKLREAAQPKKI 66
LSE+V+D A + KATE Q+VD LEVVA+EF++EIE MS LE RLSP EP+L+E QPKK
Sbjct: 73 LSEKVEDQATRYKATENQKVDHLEVVAEEFSKEIERMSPLEPRLSPNEPRLKEVVQPKKK 132
Query: 67 ESKSGTSRPRDA 79
+SK+GTSR DA
Sbjct: 133 KSKAGTSRLEDA 144
BLAST of IVF0017571 vs. ExPASy TrEMBL
Match:
A0A5A7VMZ4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold138G001080 PE=4 SV=1)
HSP 1 Score: 72.0 bits (175), Expect = 1.2e-09
Identity = 42/54 (77.78%), Postives = 46/54 (85.19%), Query Frame = 0
Query: 20 ATEKQEVDCLEVVAKEFTEEIENMSLLETRLSPEEPKLREAAQPKKIESKSGTS 74
ATEKQEVD LEVVA+EFT+EIENMS LE RLSP+E LREA QPKKI+SK TS
Sbjct: 2 ATEKQEVDHLEVVAEEFTKEIENMSQLEPRLSPDEHGLREAPQPKKIKSKPKTS 55
BLAST of IVF0017571 vs. ExPASy TrEMBL
Match:
A0A5D3BXZ2 (Stress response protein NST1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold675G00240 PE=4 SV=1)
HSP 1 Score: 71.2 bits (173), Expect = 2.1e-09
Identity = 41/75 (54.67%), Postives = 54/75 (72.00%), Query Frame = 0
Query: 3 SFAKLSERVKDMAAKNKATEKQEVDCLEVVAKEFTEEIENMSLLETRLSPEEPKLREAAQ 62
+ A LSE+ + +A KNKA +QEV+ LEVV +EF++EI+ MS LE RL P+E L AQ
Sbjct: 131 TLANLSEQAESVATKNKAVARQEVNHLEVVVEEFSQEIKRMSSLEPRLRPKETGLVSVAQ 190
Query: 63 PKKIESKSGTSRPRD 78
PKK ++K GTSRP D
Sbjct: 191 PKKGKNKEGTSRPED 205
BLAST of IVF0017571 vs. ExPASy TrEMBL
Match:
A0A5D3C3I9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1085G00100 PE=4 SV=1)
HSP 1 Score: 65.5 bits (158), Expect = 1.1e-07
Identity = 39/71 (54.93%), Postives = 49/71 (69.01%), Query Frame = 0
Query: 7 LSERVKDMAAKNKATEKQEVDCLEVVAKEFTEEIENMSLLETRLSPEEPKLREAAQPKKI 66
LSE+V+ +AA+NK E QE D ++VV K F+ EIE MS LE L PEEP+L + KK
Sbjct: 22 LSEQVESVAARNKLAEHQEGDRVDVVVKTFSREIEGMSPLEPGLRPEEPRLVKVQLQKKS 81
Query: 67 ESKSGTSRPRD 78
+SK GTSRP D
Sbjct: 82 KSKEGTSRPED 92
BLAST of IVF0017571 vs. ExPASy TrEMBL
Match:
A0A5A7VGG5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold757G00360 PE=4 SV=1)
HSP 1 Score: 65.5 bits (158), Expect = 1.1e-07
Identity = 34/71 (47.89%), Postives = 55/71 (77.46%), Query Frame = 0
Query: 7 LSERVKDMAAKNKATEKQEVDCLEVVAKEFTEEIENMSLLETRLSPEEPKLREAAQPKKI 66
+SERV+++A +NKA E QEV L+++ +EF + ++N+SLLE L +EP L+EA Q KK+
Sbjct: 1 MSERVENVAVRNKAVEYQEVGHLKLIVEEFMKRLDNISLLEPGLLSDEPGLKEAIQQKKL 60
Query: 67 ESKSGTSRPRD 78
++K+G S+P+D
Sbjct: 61 KAKAGISKPKD 71
BLAST of IVF0017571 vs. NCBI nr
Match:
KAA0043535.1 (hypothetical protein E6C27_scaffold335G00290 [Cucumis melo var. makuwa])
HSP 1 Score: 82.8 bits (203), Expect = 2.12e-17
Identity = 47/72 (65.28%), Postives = 58/72 (80.56%), Query Frame = 0
Query: 7 LSERVKDMAAKNKATEKQEVDCLEVVAKEFTEEIENMSLLETRLSPEEPKLREAAQPKKI 66
LSE+V+D A + KATE Q+VD LEVVA+EF++EIE MS LE RLSP EP+L+E QPKK
Sbjct: 73 LSEKVEDQATRYKATENQKVDHLEVVAEEFSKEIERMSPLEPRLSPNEPRLKEVVQPKKK 132
Query: 67 ESKSGTSRPRDA 78
+SK+GTSR DA
Sbjct: 133 KSKAGTSRLEDA 144
BLAST of IVF0017571 vs. NCBI nr
Match:
KAA0067936.1 (hypothetical protein E6C27_scaffold138G001080 [Cucumis melo var. makuwa])
HSP 1 Score: 71.6 bits (174), Expect = 1.44e-14
Identity = 42/54 (77.78%), Postives = 46/54 (85.19%), Query Frame = 0
Query: 20 ATEKQEVDCLEVVAKEFTEEIENMSLLETRLSPEEPKLREAAQPKKIESKSGTS 73
ATEKQEVD LEVVA+EFT+EIENMS LE RLSP+E LREA QPKKI+SK TS
Sbjct: 2 ATEKQEVDHLEVVAEEFTKEIENMSQLEPRLSPDEHGLREAPQPKKIKSKPKTS 55
BLAST of IVF0017571 vs. NCBI nr
Match:
KAA0052868.1 (stress response protein NST1-like [Cucumis melo var. makuwa] >TYK04357.1 stress response protein NST1-like [Cucumis melo var. makuwa])
HSP 1 Score: 70.9 bits (172), Expect = 1.01e-12
Identity = 41/75 (54.67%), Postives = 54/75 (72.00%), Query Frame = 0
Query: 3 SFAKLSERVKDMAAKNKATEKQEVDCLEVVAKEFTEEIENMSLLETRLSPEEPKLREAAQ 62
+ A LSE+ + +A KNKA +QEV+ LEVV +EF++EI+ MS LE RL P+E L AQ
Sbjct: 131 TLANLSEQAESVATKNKAVARQEVNHLEVVVEEFSQEIKRMSSLEPRLRPKETGLVSVAQ 190
Query: 63 PKKIESKSGTSRPRD 77
PKK ++K GTSRP D
Sbjct: 191 PKKGKNKEGTSRPED 205
BLAST of IVF0017571 vs. NCBI nr
Match:
KAA0067452.1 (hypothetical protein E6C27_scaffold40G001180 [Cucumis melo var. makuwa] >TYK09553.1 hypothetical protein E5676_scaffold757G00360 [Cucumis melo var. makuwa])
HSP 1 Score: 64.7 bits (156), Expect = 1.36e-11
Identity = 34/71 (47.89%), Postives = 55/71 (77.46%), Query Frame = 0
Query: 7 LSERVKDMAAKNKATEKQEVDCLEVVAKEFTEEIENMSLLETRLSPEEPKLREAAQPKKI 66
+SERV+++A +NKA E QEV L+++ +EF + ++N+SLLE L +EP L+EA Q KK+
Sbjct: 1 MSERVENVAVRNKAVEYQEVGHLKLIVEEFMKRLDNISLLEPGLLSDEPGLKEAIQQKKL 60
Query: 67 ESKSGTSRPRD 77
++K+G S+P+D
Sbjct: 61 KAKAGISKPKD 71
BLAST of IVF0017571 vs. NCBI nr
Match:
KAA0037283.1 (hypothetical protein E6C27_scaffold68G00180 [Cucumis melo var. makuwa] >TYK05900.1 hypothetical protein E5676_scaffold1085G00100 [Cucumis melo var. makuwa])
HSP 1 Score: 64.7 bits (156), Expect = 1.98e-11
Identity = 39/71 (54.93%), Postives = 49/71 (69.01%), Query Frame = 0
Query: 7 LSERVKDMAAKNKATEKQEVDCLEVVAKEFTEEIENMSLLETRLSPEEPKLREAAQPKKI 66
LSE+V+ +AA+NK E QE D ++VV K F+ EIE MS LE L PEEP+L + KK
Sbjct: 22 LSEQVESVAARNKLAEHQEGDRVDVVVKTFSREIEGMSPLEPGLRPEEPRLVKVQLQKKS 81
Query: 67 ESKSGTSRPRD 77
+SK GTSRP D
Sbjct: 82 KSKEGTSRPED 92
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5A7TQ54 | 5.3e-13 | 65.28 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
A0A5A7VMZ4 | 1.2e-09 | 77.78 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
A0A5D3BXZ2 | 2.1e-09 | 54.67 | Stress response protein NST1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E567... | [more] |
A0A5D3C3I9 | 1.1e-07 | 54.93 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A5A7VGG5 | 1.1e-07 | 47.89 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
Match Name | E-value | Identity | Description | |
KAA0043535.1 | 2.12e-17 | 65.28 | hypothetical protein E6C27_scaffold335G00290 [Cucumis melo var. makuwa] | [more] |
KAA0067936.1 | 1.44e-14 | 77.78 | hypothetical protein E6C27_scaffold138G001080 [Cucumis melo var. makuwa] | [more] |
KAA0052868.1 | 1.01e-12 | 54.67 | stress response protein NST1-like [Cucumis melo var. makuwa] >TYK04357.1 stress ... | [more] |
KAA0067452.1 | 1.36e-11 | 47.89 | hypothetical protein E6C27_scaffold40G001180 [Cucumis melo var. makuwa] >TYK0955... | [more] |
KAA0037283.1 | 1.98e-11 | 54.93 | hypothetical protein E6C27_scaffold68G00180 [Cucumis melo var. makuwa] >TYK05900... | [more] |
Match Name | E-value | Identity | Description | |