IVF0017305 (gene) Melon (IVF77) v1

Overview
NameIVF0017305
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionProtein MNN4-like
Locationchr04: 9846719 .. 9846943 (-)
RNA-Seq ExpressionIVF0017305
SyntenyIVF0017305
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGGAAACAAAGCTAAGGGAGCTGAAAAAGCTCCTTAGTCAGGTTGAGAAAGTAGCCCTCTCCGTGGAGAAAGGCAAAGACAAAGAAAATAATTTTGACGAGCATTGCGAGGAGTTTAAGAAAGAGATTGAGGAGTTAAGTCCTTTGCTGGACGAGATGGTAAGACCCGCCAAAAAGAGAAAAGTTGCGATGAAGAAGAAGACTTTAAGAGCGCAATTTTAG

mRNA sequence

ATGAAGGAAACAAAGCTAAGGGAGCTGAAAAAGCTCCTTAGTCAGGTTGAGAAAGTAGCCCTCTCCGTGGAGAAAGGCAAAGACAAAGAAAATAATTTTGACGAGCATTGCGAGGAGTTTAAGAAAGAGATTGAGGAGTTAAGTCCTTTGCTGGACGAGATGGTAAGACCCGCCAAAAAGAGAAAAGTTGCGATGAAGAAGAAGACTTTAAGAGCGCAATTTTAG

Coding sequence (CDS)

ATGAAGGAAACAAAGCTAAGGGAGCTGAAAAAGCTCCTTAGTCAGGTTGAGAAAGTAGCCCTCTCCGTGGAGAAAGGCAAAGACAAAGAAAATAATTTTGACGAGCATTGCGAGGAGTTTAAGAAAGAGATTGAGGAGTTAAGTCCTTTGCTGGACGAGATGGTAAGACCCGCCAAAAAGAGAAAAGTTGCGATGAAGAAGAAGACTTTAAGAGCGCAATTTTAG

Protein sequence

MKETKLRELKKLLSQVEKVALSVEKGKDKENNFDEHCEEFKKEIEELSPLLDEMVRPAKKRKVAMKKKTLRAQF
Homology
BLAST of IVF0017305 vs. ExPASy TrEMBL
Match: A0A5A7TTT3 (Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold543G00540 PE=4 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 6.6e-29
Identity = 74/74 (100.00%), Postives = 74/74 (100.00%), Query Frame = 0

Query: 1  MKETKLRELKKLLSQVEKVALSVEKGKDKENNFDEHCEEFKKEIEELSPLLDEMVRPAKK 60
          MKETKLRELKKLLSQVEKVALSVEKGKDKENNFDEHCEEFKKEIEELSPLLDEMVRPAKK
Sbjct: 1  MKETKLRELKKLLSQVEKVALSVEKGKDKENNFDEHCEEFKKEIEELSPLLDEMVRPAKK 60

Query: 61 RKVAMKKKTLRAQF 75
          RKVAMKKKTLRAQF
Sbjct: 61 RKVAMKKKTLRAQF 74

BLAST of IVF0017305 vs. ExPASy TrEMBL
Match: A0A5D3BF32 (Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1251G00380 PE=4 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 1.4e-18
Identity = 54/54 (100.00%), Postives = 54/54 (100.00%), Query Frame = 0

Query: 1  MKETKLRELKKLLSQVEKVALSVEKGKDKENNFDEHCEEFKKEIEELSPLLDEM 55
          MKETKLRELKKLLSQVEKVALSVEKGKDKENNFDEHCEEFKKEIEELSPLLDEM
Sbjct: 1  MKETKLRELKKLLSQVEKVALSVEKGKDKENNFDEHCEEFKKEIEELSPLLDEM 54

BLAST of IVF0017305 vs. ExPASy TrEMBL
Match: A0A5A7TGV4 (Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold32G00910 PE=4 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 3.3e-12
Identity = 47/74 (63.51%), Postives = 60/74 (81.08%), Query Frame = 0

Query: 2   KETKLRELKKLLSQVEKVALSVEKGKDKENNFDEHCEEFKKEIEELSPLLDEMV-RPAKK 61
           KE KLR+ ++LL++V+K+ALSVEKGK+KE  F+E  +EF+KEI+E SPL D +V RPAKK
Sbjct: 42  KEIKLRQPEELLNKVDKLALSVEKGKEKEKTFEEFYKEFEKEIDEFSPLEDNVVERPAKK 101

Query: 62  RKVAMKKKTLRAQF 75
           R V MKKK LR QF
Sbjct: 102 RNVTMKKKVLRDQF 115

BLAST of IVF0017305 vs. ExPASy TrEMBL
Match: A0A5D3C2J1 (Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold572G00380 PE=4 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 3.3e-12
Identity = 44/73 (60.27%), Postives = 56/73 (76.71%), Query Frame = 0

Query: 2   KETKLRELKKLLSQVEKVALSVEKGKDKENNFDEHCEEFKKEIEELSPLLDEMVRPAKKR 61
           KE +LRE ++LL +VEKVA+  EKGK +E  F+EH EEF+KEI EL PL D+ +RPA KR
Sbjct: 72  KEIRLREQEELLGKVEKVAIFAEKGKGEEKTFEEHYEEFEKEINELIPLEDKAIRPATKR 131

Query: 62  KVAMKKKTLRAQF 75
           K+ MKKK LR +F
Sbjct: 132 KIMMKKKALREKF 144

BLAST of IVF0017305 vs. ExPASy TrEMBL
Match: A0A5A7SUZ4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1032G00150 PE=4 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 7.3e-12
Identity = 44/73 (60.27%), Postives = 57/73 (78.08%), Query Frame = 0

Query: 2   KETKLRELKKLLSQVEKVALSVEKGKDKENNFDEHCEEFKKEIEELSPLLDEMVRPAKKR 61
           KETKLRE ++LL +V+ VALS EK K +E NF+ H EEF+KEI++L PL ++++RPAKKR
Sbjct: 200 KETKLREREELLGKVDNVALSAEKDKCEEKNFEVHYEEFEKEIDKLCPLEEKVIRPAKKR 259

Query: 62  KVAMKKKTLRAQF 75
              MKKK LR QF
Sbjct: 260 TFTMKKKALRKQF 272

BLAST of IVF0017305 vs. NCBI nr
Match: KAA0046474.1 (protein MNN4-like [Cucumis melo var. makuwa])

HSP 1 Score: 134 bits (338), Expect = 1.94e-39
Identity = 74/74 (100.00%), Postives = 74/74 (100.00%), Query Frame = 0

Query: 1  MKETKLRELKKLLSQVEKVALSVEKGKDKENNFDEHCEEFKKEIEELSPLLDEMVRPAKK 60
          MKETKLRELKKLLSQVEKVALSVEKGKDKENNFDEHCEEFKKEIEELSPLLDEMVRPAKK
Sbjct: 1  MKETKLRELKKLLSQVEKVALSVEKGKDKENNFDEHCEEFKKEIEELSPLLDEMVRPAKK 60

Query: 61 RKVAMKKKTLRAQF 74
          RKVAMKKKTLRAQF
Sbjct: 61 RKVAMKKKTLRAQF 74

BLAST of IVF0017305 vs. NCBI nr
Match: TYJ97737.1 (protein MNN4-like [Cucumis melo var. makuwa])

HSP 1 Score: 100 bits (249), Expect = 7.33e-24
Identity = 54/54 (100.00%), Postives = 54/54 (100.00%), Query Frame = 0

Query: 1  MKETKLRELKKLLSQVEKVALSVEKGKDKENNFDEHCEEFKKEIEELSPLLDEM 54
          MKETKLRELKKLLSQVEKVALSVEKGKDKENNFDEHCEEFKKEIEELSPLLDEM
Sbjct: 1  MKETKLRELKKLLSQVEKVALSVEKGKDKENNFDEHCEEFKKEIEELSPLLDEM 54

BLAST of IVF0017305 vs. NCBI nr
Match: KAA0041276.1 (protein MNN4-like [Cucumis melo var. makuwa] >TYK16072.1 protein MNN4-like [Cucumis melo var. makuwa])

HSP 1 Score: 79.3 bits (194), Expect = 2.38e-16
Identity = 47/74 (63.51%), Postives = 60/74 (81.08%), Query Frame = 0

Query: 2   KETKLRELKKLLSQVEKVALSVEKGKDKENNFDEHCEEFKKEIEELSPLLDEMV-RPAKK 61
           KE KLR+ ++LL++V+K+ALSVEKGK+KE  F+E  +EF+KEI+E SPL D +V RPAKK
Sbjct: 42  KEIKLRQPEELLNKVDKLALSVEKGKEKEKTFEEFYKEFEKEIDEFSPLEDNVVERPAKK 101

Query: 62  RKVAMKKKTLRAQF 74
           R V MKKK LR QF
Sbjct: 102 RNVTMKKKVLRDQF 115

BLAST of IVF0017305 vs. NCBI nr
Match: KAA0066500.1 (protein MNN4-like [Cucumis melo var. makuwa] >TYK06141.1 protein MNN4-like [Cucumis melo var. makuwa])

HSP 1 Score: 79.3 bits (194), Expect = 2.59e-16
Identity = 44/73 (60.27%), Postives = 56/73 (76.71%), Query Frame = 0

Query: 2   KETKLRELKKLLSQVEKVALSVEKGKDKENNFDEHCEEFKKEIEELSPLLDEMVRPAKKR 61
           KE +LRE ++LL +VEKVA+  EKGK +E  F+EH EEF+KEI EL PL D+ +RPA KR
Sbjct: 72  KEIRLREQEELLGKVEKVAIFAEKGKGEEKTFEEHYEEFEKEINELIPLEDKAIRPATKR 131

Query: 62  KVAMKKKTLRAQF 74
           K+ MKKK LR +F
Sbjct: 132 KIMMKKKALREKF 144

BLAST of IVF0017305 vs. NCBI nr
Match: KAA0033147.1 (hypothetical protein E6C27_scaffold269G002910 [Cucumis melo var. makuwa] >TYK17087.1 hypothetical protein E5676_scaffold1032G00150 [Cucumis melo var. makuwa])

HSP 1 Score: 78.2 bits (191), Expect = 3.92e-15
Identity = 44/73 (60.27%), Postives = 57/73 (78.08%), Query Frame = 0

Query: 2   KETKLRELKKLLSQVEKVALSVEKGKDKENNFDEHCEEFKKEIEELSPLLDEMVRPAKKR 61
           KETKLRE ++LL +V+ VALS EK K +E NF+ H EEF+KEI++L PL ++++RPAKKR
Sbjct: 200 KETKLREREELLGKVDNVALSAEKDKCEEKNFEVHYEEFEKEIDKLCPLEEKVIRPAKKR 259

Query: 62  KVAMKKKTLRAQF 74
              MKKK LR QF
Sbjct: 260 TFTMKKKALRKQF 272

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7TTT36.6e-29100.00Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold543G00... [more]
A0A5D3BF321.4e-18100.00Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1251G0... [more]
A0A5A7TGV43.3e-1263.51Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold32G009... [more]
A0A5D3C2J13.3e-1260.27Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold572G00... [more]
A0A5A7SUZ47.3e-1260.27Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
Match NameE-valueIdentityDescription
KAA0046474.11.94e-39100.00protein MNN4-like [Cucumis melo var. makuwa][more]
TYJ97737.17.33e-24100.00protein MNN4-like [Cucumis melo var. makuwa][more]
KAA0041276.12.38e-1663.51protein MNN4-like [Cucumis melo var. makuwa] >TYK16072.1 protein MNN4-like [Cucu... [more]
KAA0066500.12.59e-1660.27protein MNN4-like [Cucumis melo var. makuwa] >TYK06141.1 protein MNN4-like [Cucu... [more]
KAA0033147.13.92e-1560.27hypothetical protein E6C27_scaffold269G002910 [Cucumis melo var. makuwa] >TYK170... [more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0017305.2IVF0017305.2mRNA