Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGTCAATCTAGAACGGTCTTCCATGACGGTTCCCAAACTTCTAGACTGGAGCCAGCTAACTCGTAATCCAGTTTGGACTATCGAGCACGTAACTACTCCTAGAACAAGGAAAAGCAGCACGGCTCAGATAACCGAATATGATGATGGGCATGTTGAAGTTCAATTTCAAGAAGAACCCCATCATCCTCCAATCCGAGAAATATATAATGGACGGTCCAGTGTTTCAGAGTATCAACCAACCACTAGGGAAAGACCAATTCCTAGGTCTAATTCAATGAGGATGTCAGTGGATTTTGAACAATTCATTCCAGACGTTCAGTATGAGAAGTCTGAGGGATCTTTGTCACCCACTTAA
mRNA sequence
ATGGAAGTCAATCTAGAACGGTCTTCCATGACGGTTCCCAAACTTCTAGACTGGAGCCAGCTAACTCGTAATCCAGTTTGGACTATCGAGCACGTAACTACTCCTAGAACAAGGAAAAGCAGCACGGCTCAGATAACCGAATATGATGATGGGCATGTTGAAGTTCAATTTCAAGAAGAACCCCATCATCCTCCAATCCGAGAAATATATAATGGACGGTCCAGTGTTTCAGAGTATCAACCAACCACTAGGGAAAGACCAATTCCTAGGTCTAATTCAATGAGGATGTCAGTGGATTTTGAACAATTCATTCCAGACGTTCAGTATGAGAAGTCTGAGGGATCTTTGTCACCCACTTAA
Coding sequence (CDS)
ATGGAAGTCAATCTAGAACGGTCTTCCATGACGGTTCCCAAACTTCTAGACTGGAGCCAGCTAACTCGTAATCCAGTTTGGACTATCGAGCACGTAACTACTCCTAGAACAAGGAAAAGCAGCACGGCTCAGATAACCGAATATGATGATGGGCATGTTGAAGTTCAATTTCAAGAAGAACCCCATCATCCTCCAATCCGAGAAATATATAATGGACGGTCCAGTGTTTCAGAGTATCAACCAACCACTAGGGAAAGACCAATTCCTAGGTCTAATTCAATGAGGATGTCAGTGGATTTTGAACAATTCATTCCAGACGTTCAGTATGAGAAGTCTGAGGGATCTTTGTCACCCACTTAA
Protein sequence
MEVNLERSSMTVPKLLDWSQLTRNPVWTIEHVTTPRTRKSSTAQITEYDDGHVEVQFQEEPHHPPIREIYNGRSSVSEYQPTTRERPIPRSNSMRMSVDFEQFIPDVQYEKSEGSLSPT
Homology
BLAST of IVF0015994 vs. ExPASy TrEMBL
Match:
A0A5D3CLG3 (Polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold106G00900 PE=4 SV=1)
HSP 1 Score: 222.2 bits (565), Expect = 1.1e-54
Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = 0
Query: 1 MEVNLERSSMTVPKLLDWSQLTRNPVWTIEHVTTPRTRKSSTAQITEYDDGHVEVQFQEE 60
MEVNLERSSMTVPKLLDWSQLTRNPVWTIEHVTTPRTRKSSTAQITEYDDGHVEVQFQEE
Sbjct: 3 MEVNLERSSMTVPKLLDWSQLTRNPVWTIEHVTTPRTRKSSTAQITEYDDGHVEVQFQEE 62
Query: 61 PHHPPIREIYNGRSSVSEYQPTTRERPIPRSNSMRMSVDFEQFIPDVQ 109
PHHPPIREIYNGRSSVSEYQPTTRERPIPRSNSMRMSVDFEQFIPDVQ
Sbjct: 63 PHHPPIREIYNGRSSVSEYQPTTRERPIPRSNSMRMSVDFEQFIPDVQ 110
BLAST of IVF0015994 vs. ExPASy TrEMBL
Match:
A0A5D3CBV5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1737G00910 PE=4 SV=1)
HSP 1 Score: 204.1 bits (518), Expect = 3.2e-49
Identity = 100/119 (84.03%), Postives = 108/119 (90.76%), Query Frame = 0
Query: 1 MEVNLERSSMTVPKLLDWSQLTRNPVWTIEHVTTPRTRKSSTAQITEYDDGHVEVQFQEE 60
MEVNLER SM VPKLLDWS+LTRN VW+IEH T PRTR+S+TAQI EYDDGHVEVQFQEE
Sbjct: 3 MEVNLERFSMMVPKLLDWSELTRNSVWSIEHATAPRTRQSNTAQIIEYDDGHVEVQFQEE 62
Query: 61 PHHPPIREIYNGRSSVSEYQPTTRERPIPRSNSMRMSVDFEQFIPDVQYEKSEGSLSPT 120
PH PPIREIY+GRSSVSEY+PTTRERPI S SMRM+VDFEQ IPDVQYEKS+GSLSPT
Sbjct: 63 PHQPPIREIYSGRSSVSEYRPTTRERPILMSTSMRMAVDFEQSIPDVQYEKSKGSLSPT 121
BLAST of IVF0015994 vs. ExPASy TrEMBL
Match:
A0A5A7U9B4 (Polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold180G001110 PE=4 SV=1)
HSP 1 Score: 177.2 bits (448), Expect = 4.1e-41
Identity = 89/110 (80.91%), Postives = 96/110 (87.27%), Query Frame = 0
Query: 10 MTVPKLLDWSQLTRNPVWTIEHVTTPRTRKSSTAQITEYDDGHVEVQFQEEPHHPPIREI 69
MTV KLL+WS+LT NPVWTIEH T PRTR+SST QI EY DGHVEVQFQEEPH PP REI
Sbjct: 1 MTVLKLLNWSELTCNPVWTIEHATVPRTRQSSTTQIIEY-DGHVEVQFQEEPHQPPNREI 60
Query: 70 YNGRSSVSEYQPTTRERPIPRSNSMRMSVDFEQFIPDVQYEKSEGSLSPT 120
+GRSS+SEY+PTTRERPI +SNSMRM VDFEQ IPD QYEKSEGSLSPT
Sbjct: 61 CSGRSSISEYRPTTRERPITKSNSMRMLVDFEQSIPDEQYEKSEGSLSPT 109
BLAST of IVF0015994 vs. ExPASy TrEMBL
Match:
A0A5D3C908 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1737G001150 PE=4 SV=1)
HSP 1 Score: 159.8 bits (403), Expect = 6.8e-36
Identity = 77/99 (77.78%), Postives = 87/99 (87.88%), Query Frame = 0
Query: 1 MEVNLERSSMTVPKLLDWSQLTRNPVWTIEHVTTPRTRKSSTAQITEYDDGHVEVQFQEE 60
MEVNLERSSMT+PKLLDWS+LTRN +W+IEH T RTR+SS AQITEYDDGHVEVQFQEE
Sbjct: 3 MEVNLERSSMTIPKLLDWSELTRNSIWSIEHATVFRTRQSSMAQITEYDDGHVEVQFQEE 62
Query: 61 PHHPPIREIYNGRSSVSEYQPTTRERPIPRSNSMRMSVD 100
H PPIREIY+GRSSVS+YQPTTRERP+P+S +S D
Sbjct: 63 SHQPPIREIYSGRSSVSKYQPTTRERPLPQSVCEGLSFD 101
BLAST of IVF0015994 vs. ExPASy TrEMBL
Match:
A0A5A7SRU6 (Polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold49G00880 PE=4 SV=1)
HSP 1 Score: 144.8 bits (364), Expect = 2.3e-31
Identity = 69/83 (83.13%), Postives = 76/83 (91.57%), Query Frame = 0
Query: 1 MEVNLERSSMTVPKLLDWSQLTRNPVWTIEHVTTPRTRKSSTAQITEYDDGHVEVQFQEE 60
M+VNLERSSM V KLLDWS+LTRNP+W+IEH TTPRTR+SST QITEYDDGHVEVQFQEE
Sbjct: 236 MKVNLERSSMMVLKLLDWSELTRNPIWSIEHATTPRTRQSSTTQITEYDDGHVEVQFQEE 295
Query: 61 PHHPPIREIYNGRSSVSEYQPTT 84
H PPIREIY+G SSVSEY+PTT
Sbjct: 296 SHEPPIREIYSGWSSVSEYRPTT 318
BLAST of IVF0015994 vs. NCBI nr
Match:
KAA0049723.1 (polyprotein [Cucumis melo var. makuwa] >TYK12152.1 polyprotein [Cucumis melo var. makuwa])
HSP 1 Score: 222 bits (566), Expect = 3.56e-70
Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = 0
Query: 1 MEVNLERSSMTVPKLLDWSQLTRNPVWTIEHVTTPRTRKSSTAQITEYDDGHVEVQFQEE 60
MEVNLERSSMTVPKLLDWSQLTRNPVWTIEHVTTPRTRKSSTAQITEYDDGHVEVQFQEE
Sbjct: 3 MEVNLERSSMTVPKLLDWSQLTRNPVWTIEHVTTPRTRKSSTAQITEYDDGHVEVQFQEE 62
Query: 61 PHHPPIREIYNGRSSVSEYQPTTRERPIPRSNSMRMSVDFEQFIPDVQ 108
PHHPPIREIYNGRSSVSEYQPTTRERPIPRSNSMRMSVDFEQFIPDVQ
Sbjct: 63 PHHPPIREIYNGRSSVSEYQPTTRERPIPRSNSMRMSVDFEQFIPDVQ 110
BLAST of IVF0015994 vs. NCBI nr
Match:
KAA0050634.1 (hypothetical protein E6C27_scaffold673G001010 [Cucumis melo var. makuwa] >TYK07799.1 hypothetical protein E5676_scaffold1737G00910 [Cucumis melo var. makuwa])
HSP 1 Score: 205 bits (521), Expect = 7.62e-65
Identity = 100/119 (84.03%), Postives = 108/119 (90.76%), Query Frame = 0
Query: 1 MEVNLERSSMTVPKLLDWSQLTRNPVWTIEHVTTPRTRKSSTAQITEYDDGHVEVQFQEE 60
MEVNLER SM VPKLLDWS+LTRN VW+IEH T PRTR+S+TAQI EYDDGHVEVQFQEE
Sbjct: 3 MEVNLERFSMMVPKLLDWSELTRNSVWSIEHATAPRTRQSNTAQIIEYDDGHVEVQFQEE 62
Query: 61 PHHPPIREIYNGRSSVSEYQPTTRERPIPRSNSMRMSVDFEQFIPDVQYEKSEGSLSPT 119
PH PPIREIY+GRSSVSEY+PTTRERPI S SMRM+VDFEQ IPDVQYEKS+GSLSPT
Sbjct: 63 PHQPPIREIYSGRSSVSEYRPTTRERPILMSTSMRMAVDFEQSIPDVQYEKSKGSLSPT 121
BLAST of IVF0015994 vs. NCBI nr
Match:
KAA0050195.1 (polyprotein [Cucumis melo var. makuwa] >TYJ98214.1 polyprotein [Cucumis melo var. makuwa])
HSP 1 Score: 178 bits (451), Expect = 8.97e-53
Identity = 89/110 (80.91%), Postives = 96/110 (87.27%), Query Frame = 0
Query: 10 MTVPKLLDWSQLTRNPVWTIEHVTTPRTRKSSTAQITEYDDGHVEVQFQEEPHHPPIREI 69
MTV KLL+WS+LT NPVWTIEH T PRTR+SST QI EYD GHVEVQFQEEPH PP REI
Sbjct: 1 MTVLKLLNWSELTCNPVWTIEHATVPRTRQSSTTQIIEYD-GHVEVQFQEEPHQPPNREI 60
Query: 70 YNGRSSVSEYQPTTRERPIPRSNSMRMSVDFEQFIPDVQYEKSEGSLSPT 119
+GRSS+SEY+PTTRERPI +SNSMRM VDFEQ IPD QYEKSEGSLSPT
Sbjct: 61 CSGRSSISEYRPTTRERPITKSNSMRMLVDFEQSIPDEQYEKSEGSLSPT 109
BLAST of IVF0015994 vs. NCBI nr
Match:
KAA0050620.1 (hypothetical protein E6C27_scaffold673G00840 [Cucumis melo var. makuwa] >TYK07820.1 hypothetical protein E5676_scaffold1737G001150 [Cucumis melo var. makuwa])
HSP 1 Score: 160 bits (404), Expect = 2.56e-48
Identity = 77/99 (77.78%), Postives = 87/99 (87.88%), Query Frame = 0
Query: 1 MEVNLERSSMTVPKLLDWSQLTRNPVWTIEHVTTPRTRKSSTAQITEYDDGHVEVQFQEE 60
MEVNLERSSMT+PKLLDWS+LTRN +W+IEH T RTR+SS AQITEYDDGHVEVQFQEE
Sbjct: 3 MEVNLERSSMTIPKLLDWSELTRNSIWSIEHATVFRTRQSSMAQITEYDDGHVEVQFQEE 62
Query: 61 PHHPPIREIYNGRSSVSEYQPTTRERPIPRSNSMRMSVD 99
H PPIREIY+GRSSVS+YQPTTRERP+P+S +S D
Sbjct: 63 SHQPPIREIYSGRSSVSKYQPTTRERPLPQSVCEGLSFD 101
BLAST of IVF0015994 vs. NCBI nr
Match:
KAA0033914.1 (polyprotein [Cucumis melo var. makuwa] >TYK01296.1 polyprotein [Cucumis melo var. makuwa])
HSP 1 Score: 144 bits (364), Expect = 4.75e-39
Identity = 69/83 (83.13%), Postives = 76/83 (91.57%), Query Frame = 0
Query: 1 MEVNLERSSMTVPKLLDWSQLTRNPVWTIEHVTTPRTRKSSTAQITEYDDGHVEVQFQEE 60
M+VNLERSSM V KLLDWS+LTRNP+W+IEH TTPRTR+SST QITEYDDGHVEVQFQEE
Sbjct: 236 MKVNLERSSMMVLKLLDWSELTRNPIWSIEHATTPRTRQSSTTQITEYDDGHVEVQFQEE 295
Query: 61 PHHPPIREIYNGRSSVSEYQPTT 83
H PPIREIY+G SSVSEY+PTT
Sbjct: 296 SHEPPIREIYSGWSSVSEYRPTT 318
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5D3CLG3 | 1.1e-54 | 100.00 | Polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold106G00900 PE... | [more] |
A0A5D3CBV5 | 3.2e-49 | 84.03 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A5A7U9B4 | 4.1e-41 | 80.91 | Polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold180G001110 P... | [more] |
A0A5D3C908 | 6.8e-36 | 77.78 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A5A7SRU6 | 2.3e-31 | 83.13 | Polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold49G00880 PE=... | [more] |
Match Name | E-value | Identity | Description | |
KAA0049723.1 | 3.56e-70 | 100.00 | polyprotein [Cucumis melo var. makuwa] >TYK12152.1 polyprotein [Cucumis melo var... | [more] |
KAA0050634.1 | 7.62e-65 | 84.03 | hypothetical protein E6C27_scaffold673G001010 [Cucumis melo var. makuwa] >TYK077... | [more] |
KAA0050195.1 | 8.97e-53 | 80.91 | polyprotein [Cucumis melo var. makuwa] >TYJ98214.1 polyprotein [Cucumis melo var... | [more] |
KAA0050620.1 | 2.56e-48 | 77.78 | hypothetical protein E6C27_scaffold673G00840 [Cucumis melo var. makuwa] >TYK0782... | [more] |
KAA0033914.1 | 4.75e-39 | 83.13 | polyprotein [Cucumis melo var. makuwa] >TYK01296.1 polyprotein [Cucumis melo var... | [more] |
Match Name | E-value | Identity | Description | |