IVF0015994 (gene) Melon (IVF77) v1

Overview


Name	IVF0015994
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Polyprotein
Location	chr01: 15396278 .. 15396637 (-)
RNA-Seq Expression	IVF0015994
Synteny	IVF0015994

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGTCAATCTAGAACGGTCTTCCATGACGGTTCCCAAACTTCTAGACTGGAGCCAGCTAACTCGTAATCCAGTTTGGACTATCGAGCACGTAACTACTCCTAGAACAAGGAAAAGCAGCACGGCTCAGATAACCGAATATGATGATGGGCATGTTGAAGTTCAATTTCAAGAAGAACCCCATCATCCTCCAATCCGAGAAATATATAATGGACGGTCCAGTGTTTCAGAGTATCAACCAACCACTAGGGAAAGACCAATTCCTAGGTCTAATTCAATGAGGATGTCAGTGGATTTTGAACAATTCATTCCAGACGTTCAGTATGAGAAGTCTGAGGGATCTTTGTCACCCACTTAA

mRNA sequence

ATGGAAGTCAATCTAGAACGGTCTTCCATGACGGTTCCCAAACTTCTAGACTGGAGCCAGCTAACTCGTAATCCAGTTTGGACTATCGAGCACGTAACTACTCCTAGAACAAGGAAAAGCAGCACGGCTCAGATAACCGAATATGATGATGGGCATGTTGAAGTTCAATTTCAAGAAGAACCCCATCATCCTCCAATCCGAGAAATATATAATGGACGGTCCAGTGTTTCAGAGTATCAACCAACCACTAGGGAAAGACCAATTCCTAGGTCTAATTCAATGAGGATGTCAGTGGATTTTGAACAATTCATTCCAGACGTTCAGTATGAGAAGTCTGAGGGATCTTTGTCACCCACTTAA

Coding sequence (CDS)

ATGGAAGTCAATCTAGAACGGTCTTCCATGACGGTTCCCAAACTTCTAGACTGGAGCCAGCTAACTCGTAATCCAGTTTGGACTATCGAGCACGTAACTACTCCTAGAACAAGGAAAAGCAGCACGGCTCAGATAACCGAATATGATGATGGGCATGTTGAAGTTCAATTTCAAGAAGAACCCCATCATCCTCCAATCCGAGAAATATATAATGGACGGTCCAGTGTTTCAGAGTATCAACCAACCACTAGGGAAAGACCAATTCCTAGGTCTAATTCAATGAGGATGTCAGTGGATTTTGAACAATTCATTCCAGACGTTCAGTATGAGAAGTCTGAGGGATCTTTGTCACCCACTTAA

Protein sequence

MEVNLERSSMTVPKLLDWSQLTRNPVWTIEHVTTPRTRKSSTAQITEYDDGHVEVQFQEEPHHPPIREIYNGRSSVSEYQPTTRERPIPRSNSMRMSVDFEQFIPDVQYEKSEGSLSPT

Homology

[Close]

BLAST of IVF0015994 vs. ExPASy TrEMBL
Match: A0A5D3CLG3 (Polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold106G00900 PE=4 SV=1)

HSP 1 Score: 222.2 bits (565), Expect = 1.1e-54
Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = 0


Query: 1   MEVNLERSSMTVPKLLDWSQLTRNPVWTIEHVTTPRTRKSSTAQITEYDDGHVEVQFQEE 60
           MEVNLERSSMTVPKLLDWSQLTRNPVWTIEHVTTPRTRKSSTAQITEYDDGHVEVQFQEE
Sbjct: 3   MEVNLERSSMTVPKLLDWSQLTRNPVWTIEHVTTPRTRKSSTAQITEYDDGHVEVQFQEE 62

Query: 61  PHHPPIREIYNGRSSVSEYQPTTRERPIPRSNSMRMSVDFEQFIPDVQ 109
           PHHPPIREIYNGRSSVSEYQPTTRERPIPRSNSMRMSVDFEQFIPDVQ
Sbjct: 63  PHHPPIREIYNGRSSVSEYQPTTRERPIPRSNSMRMSVDFEQFIPDVQ 110

[Close]

BLAST of IVF0015994 vs. ExPASy TrEMBL
Match: A0A5D3CBV5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1737G00910 PE=4 SV=1)

HSP 1 Score: 204.1 bits (518), Expect = 3.2e-49
Identity = 100/119 (84.03%), Postives = 108/119 (90.76%), Query Frame = 0


Query: 1   MEVNLERSSMTVPKLLDWSQLTRNPVWTIEHVTTPRTRKSSTAQITEYDDGHVEVQFQEE 60
           MEVNLER SM VPKLLDWS+LTRN VW+IEH T PRTR+S+TAQI EYDDGHVEVQFQEE
Sbjct: 3   MEVNLERFSMMVPKLLDWSELTRNSVWSIEHATAPRTRQSNTAQIIEYDDGHVEVQFQEE 62

Query: 61  PHHPPIREIYNGRSSVSEYQPTTRERPIPRSNSMRMSVDFEQFIPDVQYEKSEGSLSPT 120
           PH PPIREIY+GRSSVSEY+PTTRERPI  S SMRM+VDFEQ IPDVQYEKS+GSLSPT
Sbjct: 63  PHQPPIREIYSGRSSVSEYRPTTRERPILMSTSMRMAVDFEQSIPDVQYEKSKGSLSPT 121

[Close]

BLAST of IVF0015994 vs. ExPASy TrEMBL
Match: A0A5A7U9B4 (Polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold180G001110 PE=4 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 4.1e-41
Identity = 89/110 (80.91%), Postives = 96/110 (87.27%), Query Frame = 0


Query: 10  MTVPKLLDWSQLTRNPVWTIEHVTTPRTRKSSTAQITEYDDGHVEVQFQEEPHHPPIREI 69
           MTV KLL+WS+LT NPVWTIEH T PRTR+SST QI EY DGHVEVQFQEEPH PP REI
Sbjct: 1   MTVLKLLNWSELTCNPVWTIEHATVPRTRQSSTTQIIEY-DGHVEVQFQEEPHQPPNREI 60

Query: 70  YNGRSSVSEYQPTTRERPIPRSNSMRMSVDFEQFIPDVQYEKSEGSLSPT 120
            +GRSS+SEY+PTTRERPI +SNSMRM VDFEQ IPD QYEKSEGSLSPT
Sbjct: 61  CSGRSSISEYRPTTRERPITKSNSMRMLVDFEQSIPDEQYEKSEGSLSPT 109

[Close]

BLAST of IVF0015994 vs. ExPASy TrEMBL
Match: A0A5D3C908 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1737G001150 PE=4 SV=1)

HSP 1 Score: 159.8 bits (403), Expect = 6.8e-36
Identity = 77/99 (77.78%), Postives = 87/99 (87.88%), Query Frame = 0


Query: 1   MEVNLERSSMTVPKLLDWSQLTRNPVWTIEHVTTPRTRKSSTAQITEYDDGHVEVQFQEE 60
           MEVNLERSSMT+PKLLDWS+LTRN +W+IEH T  RTR+SS AQITEYDDGHVEVQFQEE
Sbjct: 3   MEVNLERSSMTIPKLLDWSELTRNSIWSIEHATVFRTRQSSMAQITEYDDGHVEVQFQEE 62

Query: 61  PHHPPIREIYNGRSSVSEYQPTTRERPIPRSNSMRMSVD 100
            H PPIREIY+GRSSVS+YQPTTRERP+P+S    +S D
Sbjct: 63  SHQPPIREIYSGRSSVSKYQPTTRERPLPQSVCEGLSFD 101

[Close]

BLAST of IVF0015994 vs. ExPASy TrEMBL
Match: A0A5A7SRU6 (Polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold49G00880 PE=4 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 2.3e-31
Identity = 69/83 (83.13%), Postives = 76/83 (91.57%), Query Frame = 0


Query: 1   MEVNLERSSMTVPKLLDWSQLTRNPVWTIEHVTTPRTRKSSTAQITEYDDGHVEVQFQEE 60
           M+VNLERSSM V KLLDWS+LTRNP+W+IEH TTPRTR+SST QITEYDDGHVEVQFQEE
Sbjct: 236 MKVNLERSSMMVLKLLDWSELTRNPIWSIEHATTPRTRQSSTTQITEYDDGHVEVQFQEE 295

Query: 61  PHHPPIREIYNGRSSVSEYQPTT 84
            H PPIREIY+G SSVSEY+PTT
Sbjct: 296 SHEPPIREIYSGWSSVSEYRPTT 318

[Close]

BLAST of IVF0015994 vs. NCBI nr
Match: KAA0049723.1 (polyprotein [Cucumis melo var. makuwa] >TYK12152.1 polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 222 bits (566), Expect = 3.56e-70
Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = 0


Query: 1   MEVNLERSSMTVPKLLDWSQLTRNPVWTIEHVTTPRTRKSSTAQITEYDDGHVEVQFQEE 60
           MEVNLERSSMTVPKLLDWSQLTRNPVWTIEHVTTPRTRKSSTAQITEYDDGHVEVQFQEE
Sbjct: 3   MEVNLERSSMTVPKLLDWSQLTRNPVWTIEHVTTPRTRKSSTAQITEYDDGHVEVQFQEE 62

Query: 61  PHHPPIREIYNGRSSVSEYQPTTRERPIPRSNSMRMSVDFEQFIPDVQ 108
           PHHPPIREIYNGRSSVSEYQPTTRERPIPRSNSMRMSVDFEQFIPDVQ
Sbjct: 63  PHHPPIREIYNGRSSVSEYQPTTRERPIPRSNSMRMSVDFEQFIPDVQ 110

[Close]

BLAST of IVF0015994 vs. NCBI nr
Match: KAA0050634.1 (hypothetical protein E6C27_scaffold673G001010 [Cucumis melo var. makuwa] >TYK07799.1 hypothetical protein E5676_scaffold1737G00910 [Cucumis melo var. makuwa])

HSP 1 Score: 205 bits (521), Expect = 7.62e-65
Identity = 100/119 (84.03%), Postives = 108/119 (90.76%), Query Frame = 0


Query: 1   MEVNLERSSMTVPKLLDWSQLTRNPVWTIEHVTTPRTRKSSTAQITEYDDGHVEVQFQEE 60
           MEVNLER SM VPKLLDWS+LTRN VW+IEH T PRTR+S+TAQI EYDDGHVEVQFQEE
Sbjct: 3   MEVNLERFSMMVPKLLDWSELTRNSVWSIEHATAPRTRQSNTAQIIEYDDGHVEVQFQEE 62

Query: 61  PHHPPIREIYNGRSSVSEYQPTTRERPIPRSNSMRMSVDFEQFIPDVQYEKSEGSLSPT 119
           PH PPIREIY+GRSSVSEY+PTTRERPI  S SMRM+VDFEQ IPDVQYEKS+GSLSPT
Sbjct: 63  PHQPPIREIYSGRSSVSEYRPTTRERPILMSTSMRMAVDFEQSIPDVQYEKSKGSLSPT 121

[Close]

BLAST of IVF0015994 vs. NCBI nr
Match: KAA0050195.1 (polyprotein [Cucumis melo var. makuwa] >TYJ98214.1 polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 178 bits (451), Expect = 8.97e-53
Identity = 89/110 (80.91%), Postives = 96/110 (87.27%), Query Frame = 0


Query: 10  MTVPKLLDWSQLTRNPVWTIEHVTTPRTRKSSTAQITEYDDGHVEVQFQEEPHHPPIREI 69
           MTV KLL+WS+LT NPVWTIEH T PRTR+SST QI EYD GHVEVQFQEEPH PP REI
Sbjct: 1   MTVLKLLNWSELTCNPVWTIEHATVPRTRQSSTTQIIEYD-GHVEVQFQEEPHQPPNREI 60

Query: 70  YNGRSSVSEYQPTTRERPIPRSNSMRMSVDFEQFIPDVQYEKSEGSLSPT 119
            +GRSS+SEY+PTTRERPI +SNSMRM VDFEQ IPD QYEKSEGSLSPT
Sbjct: 61  CSGRSSISEYRPTTRERPITKSNSMRMLVDFEQSIPDEQYEKSEGSLSPT 109

[Close]

BLAST of IVF0015994 vs. NCBI nr
Match: KAA0050620.1 (hypothetical protein E6C27_scaffold673G00840 [Cucumis melo var. makuwa] >TYK07820.1 hypothetical protein E5676_scaffold1737G001150 [Cucumis melo var. makuwa])

HSP 1 Score: 160 bits (404), Expect = 2.56e-48
Identity = 77/99 (77.78%), Postives = 87/99 (87.88%), Query Frame = 0


Query: 1   MEVNLERSSMTVPKLLDWSQLTRNPVWTIEHVTTPRTRKSSTAQITEYDDGHVEVQFQEE 60
           MEVNLERSSMT+PKLLDWS+LTRN +W+IEH T  RTR+SS AQITEYDDGHVEVQFQEE
Sbjct: 3   MEVNLERSSMTIPKLLDWSELTRNSIWSIEHATVFRTRQSSMAQITEYDDGHVEVQFQEE 62

Query: 61  PHHPPIREIYNGRSSVSEYQPTTRERPIPRSNSMRMSVD 99
            H PPIREIY+GRSSVS+YQPTTRERP+P+S    +S D
Sbjct: 63  SHQPPIREIYSGRSSVSKYQPTTRERPLPQSVCEGLSFD 101

[Close]

BLAST of IVF0015994 vs. NCBI nr
Match: KAA0033914.1 (polyprotein [Cucumis melo var. makuwa] >TYK01296.1 polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 144 bits (364), Expect = 4.75e-39
Identity = 69/83 (83.13%), Postives = 76/83 (91.57%), Query Frame = 0


Query: 1   MEVNLERSSMTVPKLLDWSQLTRNPVWTIEHVTTPRTRKSSTAQITEYDDGHVEVQFQEE 60
           M+VNLERSSM V KLLDWS+LTRNP+W+IEH TTPRTR+SST QITEYDDGHVEVQFQEE
Sbjct: 236 MKVNLERSSMMVLKLLDWSELTRNPIWSIEHATTPRTRQSSTTQITEYDDGHVEVQFQEE 295

Query: 61  PHHPPIREIYNGRSSVSEYQPTT 83
            H PPIREIY+G SSVSEY+PTT
Sbjct: 296 SHEPPIREIYSGWSSVSEYRPTT 318

The following BLAST results are available for this feature:

BLAST of IVF0015994 vs.


Match Name	E-value	Identity	Description

BLAST of IVF0015994 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CLG3	1.1e-54	100.00	Polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold106G00900 PE...	[more]
A0A5D3CBV5	3.2e-49	84.03	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7U9B4	4.1e-41	80.91	Polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold180G001110 P...	[more]
A0A5D3C908	6.8e-36	77.78	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7SRU6	2.3e-31	83.13	Polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold49G00880 PE=...	[more]

BLAST of IVF0015994 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0049723.1	3.56e-70	100.00	polyprotein [Cucumis melo var. makuwa] >TYK12152.1 polyprotein [Cucumis melo var...	[more]
KAA0050634.1	7.62e-65	84.03	hypothetical protein E6C27_scaffold673G001010 [Cucumis melo var. makuwa] >TYK077...	[more]
KAA0050195.1	8.97e-53	80.91	polyprotein [Cucumis melo var. makuwa] >TYJ98214.1 polyprotein [Cucumis melo var...	[more]
KAA0050620.1	2.56e-48	77.78	hypothetical protein E6C27_scaffold673G00840 [Cucumis melo var. makuwa] >TYK0782...	[more]
KAA0033914.1	4.75e-39	83.13	polyprotein [Cucumis melo var. makuwa] >TYK01296.1 polyprotein [Cucumis melo var...	[more]

BLAST of IVF0015994 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 73..94
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 59..94

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0015994.1	IVF0015994.1	mRNA