IVF0015808 (gene) Melon (IVF77) v1

Overview


Name	IVF0015808
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	40S ribosomal protein S23-1
Location	chr05: 22392196 .. 22395839 (+)
RNA-Seq Expression	IVF0015808
Synteny	IVF0015808

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAAAAGTAATTTCTCAACGAGAAGGTAAAGAAGGGAAGGAACCCCACTCTCTCCTTCGTACGTCTCCTCTGAATTCAAACCTCAAATCTGTAACCGGCGGCGGGGCGCCGGCGAACACTTGTGGTTATCGCCTCGAGCAATTGGTCTGTGTTTTTTCTCGCCCGCATTTCTTTCGGTATCATATACCTTCTTTCTTATCTTTCTTTTATTTCAATCTCTCTGCCTTCATGATTCATTATTGTTGAAGTCTCTTAGTGATTGTTAGTAATTTCTTGCAAATCGAAAATCTGAACCCAGAAATCATAATTGGAATCCCTTTATACTTTATGTAAGTAAAACACAAATCTTCTAATTTGAAGAAGCCACACTCAGAATATGAAATGTCACAGTTAAGACAAGTGACTTTTGTTGCATTGTTAATTCTGTTAGAATCTTCCTTTGTAGAATCAAGTATTGTTTCTTGCCTTTAGAACAATCTAGCAGTGGGAATTAGAATCGAATCATCTTTAGAATCTTGATTTAGTGAAGTGATATGATAATTGATGAGTGCAAAGTTTTTACCCTTCATTGTCCATAGTCTTTATGTTTGATCGTACATGTTTTCTATCGATGGTTTCATTTTGAATTGAGGTGTATGCTCATGGTAATTTCAGGATTAGCTCGTATTCTTTAGAGAAAAAAAAGCCTCAAAAGCTCATTTAGCCTCTAAAATTGTTATACCCTAATTCTAAGGATCTCATGATATCATTTCTGTTGATATTACAAGGTCATGATTAACGTTAGGAACATTGACTCAACTATTTTGGATTGGGTTTGCATTCATTTTATTGTTCCAATGACTGAATTCTGGGTTCTGGACAACCAACAATTGTTCTAAGCTTAGTTTATGAAATTGCCAATTTTTATCTGGCCCAGGAAATTAGCAGATGGCACTTAGACGATTGTTAGGCTTTTCAGATGGCGAGATCATGAGATCAGATGCTAAGCCTTGTTCACAGTTGATGAAACAGACTGCTGGGTTATGTTCTGTTGAAGGAGCACTTGGATTCTGGGTTCTTTGTAGATTACATTATGGTCTGTCAAGTATTCTTTTCAGCTTATTTGGTTTGATGTGCATATCAAGTTTCGTGTCTTTCCTTTTTCCTGAACAACTTCTAGTGAACTCAAATGGCACTTCAATCAATAATTGTTTTCTAATAGATTCTACTATATTTACTTACTCCATTGAATAGAAAACACAACGTTCTAGAATTGTCTTTAGATGTACATGGATTAAGTTGAAGCAGTTTTTGGACCAACATGAAAATCCGGGTTGGTTAGGTTAGCAACCCAAAAGAGGAAAATAGGGTCTCCAACCCCACCACTAAATTTCGGGTTGGGTCCAAAAGAACAGTTGAGTGGGAGTTGAGGGAAAAAAAAATGAAATCAAGATTAGGATTGTGAAGACTGAAAAAGAAAGGTAGTTGAAAAAAAGGGGAGATGAGAGATTGAGAAAAATAAGGGGGGATGAGAGAGATATGAATGCTACACAAAGATGGAGAGGTTGAGATGGAGAGACTTTGAATGAAACGAGGAGAGACGAGAGAGAGATAGAAATAAGGAACGTATGATTCAAGATGGAGAGAGATGGGGGAGATGTGAGAAGAGAATTGAGAAGTAGACGGGTTTGAGATGGAGAGAAAAAACATGAATGAACCCTAGAAATTTCTCGACTCAAAAACTGAACCAAATTCCGATTCTTCAAAAATCCAACCAATGCAAACTCAAAGAAATTCTAACTCAACCCATCCCAAACCCAAAAATAAAAAATCTAACCCAAACTACTTTGGGTTGGGTAGCCTGGTTTGCTCGAGTTCTTGTTCTTGGGTCATTTGAACACCCTGGAGTTTTGTTAGTATCATGACTAAGTTTACCAAGTATGAGTATCTCTGGAAGTACTTTTAAAACAGAAGTTTTTAAAAAATGTCTTTAATTACAACCACCTCAGAAAAATGAAGTGCTTAATTATCAAACATCTGTGTTTGGTTCTGCATTCTTATTTGTACTTTTAGATTCTTTCTCATCAAGCACTTGGTTCAACTAAATGCACTTTATTAGTGTTTCTCACGAAACATTTAAGTGTTCTGGACTTTGTTACTTTCAAACTCGTGCTAGTAATCTGTGCTAGAAGCACTCTCATATAGCATATGCATGATAGTTCGCTGACATTTCTCACCTAACTTTTCATCCACGGCTTTTTGGCTGCAGTACTAGGAAATTGAAACATTTTTCATGTTCTTTGAAAATAGAAAACAATTGTGACTTTGTTTAAATCAAAACCAATATTTATCCACCCTTTCCTTTTAAAGTGGATTGCCGTCATCCTAGGGGATTTTATACTGTACTCGTAAGATGCACATACATCAAACTACTTTTTTTCGCATATAAATGCATTTAACTTATTTACTTTAAATTTCAGAGATGTCCATTCCAAAGTCCAAAACTCTTAAAAATGACATGGCACTATGTTTATATTGTATCCATATCCATGCTTCTTTACTCATAGTTAAGCTTGTGTTGTGTGATAGGTCCAAGAATTACAGTACCTAGGAGTCTTCGTTGGGCAGCTTGTGGAGCAGCATCAATGAGTGCAACCTCGGCTTTGCTTGTCCGATTGTTTAGTCCAGAATGTGAACCCCAGAATATAGCTGCTTATGACAGAGGAAAGTTGTAAGGTAATTGACATTTATAGATTAATAACCTTATTGTATCATTAAACACTGTTATTCAGATGTTTCCTTATTAGGAGCTAACTGATGTAATTAGTTTTGGTTAGTTTATGCTCTTGTTATTGTTATGTTTTGTTGACTCTTATCAAGCCAAGGTCCATGTTTAGATTGTATGCGTGGCTTCATGCCATAAAACTAAAAAGGAGCGTTAGGCCTACCTTTGTATTCTTTTTTCTCAATAAAAGTTAGTTTATGAGAAGAAAAAATGCTTCTAGTCATGTAACAAAGAGCAAATTTCTAATTTGATTGAATTGGTGAATATTATGTTAACTTTTTTGCTTTCTTTATAGACTTAGCGTTTTGATGAACAAATTTAGGTTAACTTACTTTTTTCATCCCATGGTTTGGACGTTTGTGTATGTTTGTTTGAGCTCATATTTAGATGTTTGTTTTTGTCCAACTTATAAATGGTTCCAAATCCTTATTTTCTCCACTTAAAACTTATCATTTTTCTCTTTATATATATTACTTGATCTTAAACTCTGATTCGAACTATCGCAGCAGTGAAGGTTTCACTAAATGATAGGGAGCTTAAATGGAACAAACCGAACTACATAGATGAAAAGGAACGAAGTAAAGTAGAGATTGAAAGACCTAATAATTAGGAAGCTATTTATACATGAGTAAGATGTCACTGAAATATCTCATGAGTCGAGTGGAGAAAGAGAGGAAGATGATATGGAAACCATATATTATATATTGCTTTTTAGGGGCAGTTCTGGAATTATCTTTAAAGCAACTTCAATTCCATTTGTCGATTAGACATTTTTTTTGTAATGTTCTAAACAATATATCTCTCTTTCCAACCCATACATTAGTTGGGCACATATCAAATATCCTTTTATTTATGCAAATATGAACCATGGACACACCCTC

mRNA sequence

CAAAAGTAATTTCTCAACGAGAAGGTAAAGAAGGGAAGGAACCCCACTCTCTCCTTCGTACGTCTCCTCTGAATTCAAACCTCAAATCTGTAACCGGCGGCGGGGCGCCGGCGAACACTTGTGGTTATCGCCTCGAGCAATTGGAAATTAGCAGATGGCACTTAGACGATTGTTAGGCTTTTCAGATGGCGAGATCATGAGATCAGATGCTAAGCCTTGTTCACAGTTGATGAAACAGACTGCTGGGTTATGTTCTGTTGAAGGAGCACTTGGATTCTGGGTTCTTTGTAGATTACATTATGGTCCAAGAATTACAGTACCTAGGAGTCTTCGTTGGGCAGCTTGTGGAGCAGCATCAATGAGTGCAACCTCGGCTTTGCTTGTCCGATTGTTTAGTCCAGAATGTGAACCCCAGAATATAGCTGCTTATGACAGAGGAAAGTTGTAAGCAGTGAAGGTTTCACTAAATGATAGGGAGCTTAAATGGAACAAACCGAACTACATAGATGAAAAGGAACGAAGTAAAGTAGAGATTGAAAGACCTAATAATTAGGAAGCTATTTATACATGAGTAAGATGTCACTGAAATATCTCATGAGTCGAGTGGAGAAAGAGAGGAAGATGATATGGAAACCATATATTATATATTGCTTTTTAGGGGCAGTTCTGGAATTATCTTTAAAGCAACTTCAATTCCATTTGTCGATTAGACATTTTTTTTGTAATGTTCTAAACAATATATCTCTCTTTCCAACCCATACATTAGTTGGGCACATATCAAATATCCTTTTATTTATGCAAATATGAACCATGGACACACCCTC

Coding sequence (CDS)

ATGGCACTTAGACGATTGTTAGGCTTTTCAGATGGCGAGATCATGAGATCAGATGCTAAGCCTTGTTCACAGTTGATGAAACAGACTGCTGGGTTATGTTCTGTTGAAGGAGCACTTGGATTCTGGGTTCTTTGTAGATTACATTATGGTCCAAGAATTACAGTACCTAGGAGTCTTCGTTGGGCAGCTTGTGGAGCAGCATCAATGAGTGCAACCTCGGCTTTGCTTGTCCGATTGTTTAGTCCAGAATGTGAACCCCAGAATATAGCTGCTTATGACAGAGGAAAGTTGTAA

Protein sequence

MALRRLLGFSDGEIMRSDAKPCSQLMKQTAGLCSVEGALGFWVLCRLHYGPRITVPRSLRWAACGAASMSATSALLVRLFSPECEPQNIAAYDRGKL

Homology

[Close]

BLAST of IVF0015808 vs. ExPASy TrEMBL
Match: A0A1S3BWM4 (uncharacterized protein LOC103493937 OS=Cucumis melo OX=3656 GN=LOC103493937 PE=4 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 1.3e-48
Identity = 97/97 (100.00%), Postives = 97/97 (100.00%), Query Frame = 0


Query: 1  MALRRLLGFSDGEIMRSDAKPCSQLMKQTAGLCSVEGALGFWVLCRLHYGPRITVPRSLR 60
          MALRRLLGFSDGEIMRSDAKPCSQLMKQTAGLCSVEGALGFWVLCRLHYGPRITVPRSLR
Sbjct: 1  MALRRLLGFSDGEIMRSDAKPCSQLMKQTAGLCSVEGALGFWVLCRLHYGPRITVPRSLR 60

Query: 61 WAACGAASMSATSALLVRLFSPECEPQNIAAYDRGKL 98
          WAACGAASMSATSALLVRLFSPECEPQNIAAYDRGKL
Sbjct: 61 WAACGAASMSATSALLVRLFSPECEPQNIAAYDRGKL 97

[Close]

BLAST of IVF0015808 vs. ExPASy TrEMBL
Match: A0A5D3BBN9 (40S ribosomal protein S23-1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold546G00620 PE=4 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 1.3e-48
Identity = 97/97 (100.00%), Postives = 97/97 (100.00%), Query Frame = 0


Query: 1  MALRRLLGFSDGEIMRSDAKPCSQLMKQTAGLCSVEGALGFWVLCRLHYGPRITVPRSLR 60
          MALRRLLGFSDGEIMRSDAKPCSQLMKQTAGLCSVEGALGFWVLCRLHYGPRITVPRSLR
Sbjct: 1  MALRRLLGFSDGEIMRSDAKPCSQLMKQTAGLCSVEGALGFWVLCRLHYGPRITVPRSLR 60

Query: 61 WAACGAASMSATSALLVRLFSPECEPQNIAAYDRGKL 98
          WAACGAASMSATSALLVRLFSPECEPQNIAAYDRGKL
Sbjct: 61 WAACGAASMSATSALLVRLFSPECEPQNIAAYDRGKL 97

[Close]

BLAST of IVF0015808 vs. ExPASy TrEMBL
Match: A0A0A0LH12 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G034810 PE=4 SV=1)

HSP 1 Score: 193.0 bits (489), Expect = 5.9e-46
Identity = 93/97 (95.88%), Postives = 94/97 (96.91%), Query Frame = 0


Query: 1  MALRRLLGFSDGEIMRSDAKPCSQLMKQTAGLCSVEGALGFWVLCRLHYGPRITVPRSLR 60
          MALRRLLGFSDGEIMRSDAKPCSQLMKQTAGLCSVEGALGFW+LCRLHYGPRITV RSLR
Sbjct: 1  MALRRLLGFSDGEIMRSDAKPCSQLMKQTAGLCSVEGALGFWILCRLHYGPRITVRRSLR 60

Query: 61 WAACGAASMSATSALLVRLFSPECEPQNIAAYDRGKL 98
          WAACGAASMSATSALLVRLFSPECEPQNIAAYD  KL
Sbjct: 61 WAACGAASMSATSALLVRLFSPECEPQNIAAYDNRKL 97

[Close]

BLAST of IVF0015808 vs. ExPASy TrEMBL
Match: A0A6J1I1J3 (uncharacterized protein LOC111468599 OS=Cucurbita maxima OX=3661 GN=LOC111468599 PE=4 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 3.3e-44
Identity = 87/96 (90.62%), Postives = 91/96 (94.79%), Query Frame = 0


Query: 1  MALRRLLGFSDGEIMRSDAKPCSQLMKQTAGLCSVEGALGFWVLCRLHYGPRITVPRSLR 60
          MALRR  GFSDGE+MRSDAKPCSQLMKQTAGLC+V G L FW+LCRLHYGPRITVPRSLR
Sbjct: 1  MALRRFFGFSDGELMRSDAKPCSQLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLR 60

Query: 61 WAACGAASMSATSALLVRLFSPECEPQNIAAYDRGK 97
          WAACGAASMSATSALLVRLFSPECEPQNIAAYD+GK
Sbjct: 61 WAACGAASMSATSALLVRLFSPECEPQNIAAYDKGK 96

[Close]

BLAST of IVF0015808 vs. ExPASy TrEMBL
Match: A0A6J1FAF1 (uncharacterized protein LOC111443868 OS=Cucurbita moschata OX=3662 GN=LOC111443868 PE=4 SV=1)

HSP 1 Score: 185.7 bits (470), Expect = 9.5e-44
Identity = 86/96 (89.58%), Postives = 91/96 (94.79%), Query Frame = 0


Query: 1  MALRRLLGFSDGEIMRSDAKPCSQLMKQTAGLCSVEGALGFWVLCRLHYGPRITVPRSLR 60
          MALRR  GFSDGE+MRSDAKPCSQLMKQTAGLC+V G L FW+LCRLHYGPRITVPRSLR
Sbjct: 1  MALRRFFGFSDGELMRSDAKPCSQLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLR 60

Query: 61 WAACGAASMSATSALLVRLFSPECEPQNIAAYDRGK 97
          WAACGAASMSATSALLVRLFSPECEPQNIAAYD+G+
Sbjct: 61 WAACGAASMSATSALLVRLFSPECEPQNIAAYDKGQ 96

[Close]

BLAST of IVF0015808 vs. NCBI nr
Match: XP_008453135.1 (PREDICTED: uncharacterized protein LOC103493937 [Cucumis melo] >XP_008453144.1 PREDICTED: uncharacterized protein LOC103493937 [Cucumis melo] >XP_008453150.1 PREDICTED: uncharacterized protein LOC103493937 [Cucumis melo] >KAA0056088.1 40S ribosomal protein S23-1 [Cucumis melo var. makuwa] >TYJ96429.1 40S ribosomal protein S23-1 [Cucumis melo var. makuwa])

HSP 1 Score: 199 bits (507), Expect = 1.64e-64
Identity = 97/97 (100.00%), Postives = 97/97 (100.00%), Query Frame = 0


Query: 1  MALRRLLGFSDGEIMRSDAKPCSQLMKQTAGLCSVEGALGFWVLCRLHYGPRITVPRSLR 60
          MALRRLLGFSDGEIMRSDAKPCSQLMKQTAGLCSVEGALGFWVLCRLHYGPRITVPRSLR
Sbjct: 1  MALRRLLGFSDGEIMRSDAKPCSQLMKQTAGLCSVEGALGFWVLCRLHYGPRITVPRSLR 60

Query: 61 WAACGAASMSATSALLVRLFSPECEPQNIAAYDRGKL 97
          WAACGAASMSATSALLVRLFSPECEPQNIAAYDRGKL
Sbjct: 61 WAACGAASMSATSALLVRLFSPECEPQNIAAYDRGKL 97

[Close]

BLAST of IVF0015808 vs. NCBI nr
Match: XP_004144737.1 (uncharacterized protein LOC101221073 [Cucumis sativus] >KGN61028.1 hypothetical protein Csa_021335 [Cucumis sativus])

HSP 1 Score: 191 bits (484), Expect = 5.30e-61
Identity = 93/97 (95.88%), Postives = 94/97 (96.91%), Query Frame = 0


Query: 1  MALRRLLGFSDGEIMRSDAKPCSQLMKQTAGLCSVEGALGFWVLCRLHYGPRITVPRSLR 60
          MALRRLLGFSDGEIMRSDAKPCSQLMKQTAGLCSVEGALGFW+LCRLHYGPRITV RSLR
Sbjct: 1  MALRRLLGFSDGEIMRSDAKPCSQLMKQTAGLCSVEGALGFWILCRLHYGPRITVRRSLR 60

Query: 61 WAACGAASMSATSALLVRLFSPECEPQNIAAYDRGKL 97
          WAACGAASMSATSALLVRLFSPECEPQNIAAYD  KL
Sbjct: 61 WAACGAASMSATSALLVRLFSPECEPQNIAAYDNRKL 97

[Close]

BLAST of IVF0015808 vs. NCBI nr
Match: XP_022969628.1 (uncharacterized protein LOC111468599 [Cucurbita maxima])

HSP 1 Score: 185 bits (469), Expect = 1.10e-58
Identity = 87/96 (90.62%), Postives = 91/96 (94.79%), Query Frame = 0


Query: 1  MALRRLLGFSDGEIMRSDAKPCSQLMKQTAGLCSVEGALGFWVLCRLHYGPRITVPRSLR 60
          MALRR  GFSDGE+MRSDAKPCSQLMKQTAGLC+V G L FW+LCRLHYGPRITVPRSLR
Sbjct: 1  MALRRFFGFSDGELMRSDAKPCSQLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLR 60

Query: 61 WAACGAASMSATSALLVRLFSPECEPQNIAAYDRGK 96
          WAACGAASMSATSALLVRLFSPECEPQNIAAYD+GK
Sbjct: 61 WAACGAASMSATSALLVRLFSPECEPQNIAAYDKGK 96

[Close]

BLAST of IVF0015808 vs. NCBI nr
Match: XP_038889141.1 (uncharacterized protein LOC120079031 [Benincasa hispida])

HSP 1 Score: 184 bits (467), Expect = 2.22e-58
Identity = 87/97 (89.69%), Postives = 92/97 (94.85%), Query Frame = 0


Query: 1  MALRRLLGFSDGEIMRSDAKPCSQLMKQTAGLCSVEGALGFWVLCRLHYGPRITVPRSLR 60
          MALRR LGFSDGE+MRSDAKPCSQLMKQTAGLC+V G L FW+LCRLHYGPRITVPRSLR
Sbjct: 1  MALRRFLGFSDGEVMRSDAKPCSQLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLR 60

Query: 61 WAACGAASMSATSALLVRLFSPECEPQNIAAYDRGKL 97
          WAACGAASMSATSALLVRLFSPECEPQNIAAYD+ K+
Sbjct: 61 WAACGAASMSATSALLVRLFSPECEPQNIAAYDKRKV 97

[Close]

BLAST of IVF0015808 vs. NCBI nr
Match: XP_023538321.1 (uncharacterized protein LOC111799138 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 184 bits (466), Expect = 3.15e-58
Identity = 86/96 (89.58%), Postives = 91/96 (94.79%), Query Frame = 0


Query: 1  MALRRLLGFSDGEIMRSDAKPCSQLMKQTAGLCSVEGALGFWVLCRLHYGPRITVPRSLR 60
          MALRR  GFSDG++MRSDAKPCSQLMKQTAGLC+V G L FW+LCRLHYGPRITVPRSLR
Sbjct: 1  MALRRFFGFSDGDLMRSDAKPCSQLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLR 60

Query: 61 WAACGAASMSATSALLVRLFSPECEPQNIAAYDRGK 96
          WAACGAASMSATSALLVRLFSPECEPQNIAAYD+GK
Sbjct: 61 WAACGAASMSATSALLVRLFSPECEPQNIAAYDKGK 96

[Close]

BLAST of IVF0015808 vs. TAIR 10
Match: AT1G57540.1 (unknown protein; Has 29 Blast hits to 29 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 29; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 162.5 bits (410), Expect = 1.7e-40
Identity = 75/96 (78.12%), Postives = 87/96 (90.62%), Query Frame = 0


Query: 1  MALRRLLGFSDGEIMRSDAKPCSQLMKQTAGLCSVEGALGFWVLCRLHYGPRITVPRSLR 60
          MALR+ LG+S+G++MRSDAKPCS+LMKQTA + +V GALGFWVLCRLHYGPRITVPRSLR
Sbjct: 1  MALRQKLGWSEGDLMRSDAKPCSRLMKQTAAIFTVGGALGFWVLCRLHYGPRITVPRSLR 60

Query: 61 WAACGAASMSATSALLVRLFSPECEPQNIAAYDRGK 97
          WA CGA S+S ++A+LVRLFSPECEPQNIAAYD  K
Sbjct: 61 WAGCGALSVSTSTAMLVRLFSPECEPQNIAAYDNIK 96

[Close]

BLAST of IVF0015808 vs. TAIR 10
Match: AT1G57540.2 (unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 162.5 bits (410), Expect = 1.7e-40
Identity = 75/96 (78.12%), Postives = 87/96 (90.62%), Query Frame = 0


Query: 1  MALRRLLGFSDGEIMRSDAKPCSQLMKQTAGLCSVEGALGFWVLCRLHYGPRITVPRSLR 60
          MALR+ LG+S+G++MRSDAKPCS+LMKQTA + +V GALGFWVLCRLHYGPRITVPRSLR
Sbjct: 1  MALRQKLGWSEGDLMRSDAKPCSRLMKQTAAIFTVGGALGFWVLCRLHYGPRITVPRSLR 60

Query: 61 WAACGAASMSATSALLVRLFSPECEPQNIAAYDRGK 97
          WA CGA S+S ++A+LVRLFSPECEPQNIAAYD  K
Sbjct: 61 WAGCGALSVSTSTAMLVRLFSPECEPQNIAAYDNIK 96

[Close]

BLAST of IVF0015808 vs. TAIR 10
Match: AT1G57540.3 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 29 Blast hits to 29 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 29; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 162.5 bits (410), Expect = 1.7e-40
Identity = 75/96 (78.12%), Postives = 87/96 (90.62%), Query Frame = 0


Query: 1  MALRRLLGFSDGEIMRSDAKPCSQLMKQTAGLCSVEGALGFWVLCRLHYGPRITVPRSLR 60
          MALR+ LG+S+G++MRSDAKPCS+LMKQTA + +V GALGFWVLCRLHYGPRITVPRSLR
Sbjct: 1  MALRQKLGWSEGDLMRSDAKPCSRLMKQTAAIFTVGGALGFWVLCRLHYGPRITVPRSLR 60

Query: 61 WAACGAASMSATSALLVRLFSPECEPQNIAAYDRGK 97
          WA CGA S+S ++A+LVRLFSPECEPQNIAAYD  K
Sbjct: 61 WAGCGALSVSTSTAMLVRLFSPECEPQNIAAYDNIK 96

The following BLAST results are available for this feature:

BLAST of IVF0015808 vs.


Match Name	E-value	Identity	Description

BLAST of IVF0015808 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BWM4	1.3e-48	100.00	uncharacterized protein LOC103493937 OS=Cucumis melo OX=3656 GN=LOC103493937 PE=...	[more]
A0A5D3BBN9	1.3e-48	100.00	40S ribosomal protein S23-1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf...	[more]
A0A0A0LH12	5.9e-46	95.88	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G034810 PE=4 SV=1	[more]
A0A6J1I1J3	3.3e-44	90.63	uncharacterized protein LOC111468599 OS=Cucurbita maxima OX=3661 GN=LOC111468599...	[more]
A0A6J1FAF1	9.5e-44	89.58	uncharacterized protein LOC111443868 OS=Cucurbita moschata OX=3662 GN=LOC1114438...	[more]

BLAST of IVF0015808 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008453135.1	1.64e-64	100.00	PREDICTED: uncharacterized protein LOC103493937 [Cucumis melo] >XP_008453144.1 P...	[more]
XP_004144737.1	5.30e-61	95.88	uncharacterized protein LOC101221073 [Cucumis sativus] >KGN61028.1 hypothetical ...	[more]
XP_022969628.1	1.10e-58	90.63	uncharacterized protein LOC111468599 [Cucurbita maxima]	[more]
XP_038889141.1	2.22e-58	89.69	uncharacterized protein LOC120079031 [Benincasa hispida]	[more]
XP_023538321.1	3.15e-58	89.58	uncharacterized protein LOC111799138 [Cucurbita pepo subsp. pepo]	[more]

BLAST of IVF0015808 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G57540.1	1.7e-40	78.13	unknown protein; Has 29 Blast hits to 29 proteins in 11 species: Archae - 0; Bac...	[more]
AT1G57540.2	1.7e-40	78.13	unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae ...	[more]
AT1G57540.3	1.7e-40	78.13	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR36331	40S RIBOSOMAL PROTEIN	coord: 1..96

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0015808.1	IVF0015808.1	mRNA