Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGTTTTGAAGTCGCAAGACGACGGATTGTGTCTAGAGGCTCTAATCTGGTAAGGTTTAGAAGACTCTATTCATTTTCTTTTGGCGTATGTGATGTATATACAAATTTGTATCGGTATGTGGAATTTGTCTGATGTTTGTAATGCTTTCATTTTAGTTTTTTGTGCAATATTTGCAGGGCATTCGACCTTCCATTTCTGCAGTAGGAGTCTGTTCTAATGCTAAGAAAGAGGTAGTTGCATTTTCTGAAGTTTTGCTCTCCTTGTGTGCTTTGTCTGAAGATGGTTTTTAG
mRNA sequence
ATGAGTTTTGAAGTCGCAAGACGACGGATTGTGTCTAGAGGCTCTAATCTGTTTTTTGTGCAATATTTGCAGGGCATTCGACCTTCCATTTCTGCAGTAGGAGTCTGTTCTAATGCTAAGAAAGAGGTAGTTGCATTTTCTGAAGTTTTGCTCTCCTTGTGTGCTTTGTCTGAAGATGGTTTTTAG
Coding sequence (CDS)
ATGAGTTTTGAAGTCGCAAGACGACGGATTGTGTCTAGAGGCTCTAATCTGTTTTTTGTGCAATATTTGCAGGGCATTCGACCTTCCATTTCTGCAGTAGGAGTCTGTTCTAATGCTAAGAAAGAGGTAGTTGCATTTTCTGAAGTTTTGCTCTCCTTGTGTGCTTTGTCTGAAGATGGTTTTTAG
Protein sequence
MSFEVARRRIVSRGSNLFFVQYLQGIRPSISAVGVCSNAKKEVVAFSEVLLSLCALSEDGF
Homology
BLAST of IVF0015468 vs. ExPASy TrEMBL
Match:
A0A0A0K780 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G212630 PE=4 SV=1)
HSP 1 Score: 86.3 bits (212), Expect = 4.9e-14
Identity = 48/61 (78.69%), Postives = 50/61 (81.97%), Query Frame = 0
Query: 1 MSFEVARRRIVSRGSNLFFVQYLQGIRPSISAVGVCSNAKKEVVAFSEVLLSLCALSEDG 60
MSF V RRRI S GSNLF QYL+GIRPSISA V S A+KEVVAFSEVLLSLCALS DG
Sbjct: 1 MSFGVVRRRIASGGSNLFSAQYLRGIRPSISAGRVRSVAEKEVVAFSEVLLSLCALSGDG 60
Query: 61 F 62
F
Sbjct: 61 F 61
BLAST of IVF0015468 vs. ExPASy TrEMBL
Match:
A0A5A7SHN5 (Dihydrolipoyllysine-residue succinyltransferase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold124G00450 PE=3 SV=1)
HSP 1 Score: 57.4 bits (137), Expect = 2.4e-05
Identity = 31/44 (70.45%), Postives = 34/44 (77.27%), Query Frame = 0
Query: 1 MSFEVARRRIVSRGSNLFFVQYLQGIRPSISAVGVCSNAKKEVV 45
MSF V RRRI S GSNLF QYLQGIRPSISA V S A+KE++
Sbjct: 1 MSFGVVRRRIASGGSNLFSAQYLQGIRPSISAGRVRSVAEKEIL 44
BLAST of IVF0015468 vs. ExPASy TrEMBL
Match:
A0A5D3DHP6 (Dihydrolipoyllysine-residue succinyltransferase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold142G00850 PE=3 SV=1)
HSP 1 Score: 57.4 bits (137), Expect = 2.4e-05
Identity = 31/44 (70.45%), Postives = 34/44 (77.27%), Query Frame = 0
Query: 1 MSFEVARRRIVSRGSNLFFVQYLQGIRPSISAVGVCSNAKKEVV 45
MSF V RRRI S GSNLF QYLQGIRPSISA V S A+KE++
Sbjct: 1 MSFGVVRRRIASGGSNLFSAQYLQGIRPSISAGRVRSVAEKEIL 44
BLAST of IVF0015468 vs. ExPASy TrEMBL
Match:
A0A1S3BHH7 (Dihydrolipoyllysine-residue succinyltransferase OS=Cucumis melo OX=3656 GN=LOC103490134 PE=3 SV=1)
HSP 1 Score: 57.4 bits (137), Expect = 2.4e-05
Identity = 31/44 (70.45%), Postives = 34/44 (77.27%), Query Frame = 0
Query: 1 MSFEVARRRIVSRGSNLFFVQYLQGIRPSISAVGVCSNAKKEVV 45
MSF V RRRI S GSNLF QYLQGIRPSISA V S A+KE++
Sbjct: 1 MSFGVVRRRIASGGSNLFSAQYLQGIRPSISAGRVRSVAEKEIL 44
BLAST of IVF0015468 vs. ExPASy TrEMBL
Match:
A0A6J1IE26 (Dihydrolipoyllysine-residue succinyltransferase OS=Cucurbita maxima OX=3661 GN=LOC111476401 PE=3 SV=1)
HSP 1 Score: 55.8 bits (133), Expect = 7.1e-05
Identity = 30/44 (68.18%), Postives = 34/44 (77.27%), Query Frame = 0
Query: 1 MSFEVARRRIVSRGSNLFFVQYLQGIRPSISAVGVCSNAKKEVV 45
MSF V RRRI S GSNLF QYL+GIRPSISA V S A+KE++
Sbjct: 1 MSFGVVRRRIASGGSNLFSAQYLRGIRPSISAGRVRSVAEKEIL 44
BLAST of IVF0015468 vs. NCBI nr
Match:
KAG6585877.1 (Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex 2, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 63.9 bits (154), Expect = 6.32e-10
Identity = 37/60 (61.67%), Postives = 42/60 (70.00%), Query Frame = 0
Query: 1 MSFEVARRRIVSRGSNLFFVQYLQGIRPSISAVGVCSNAKKEVVAFSEVLLSLCALSEDG 60
MSF V RRRI S GSNL YL+ IRPSISA V + A+KEVV FS+V +SLC LS G
Sbjct: 75 MSFGVVRRRIASGGSNL----YLRAIRPSISAGRVRTVAEKEVVTFSDVFVSLCTLSGGG 130
BLAST of IVF0015468 vs. NCBI nr
Match:
KAG6607794.1 (Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex 2, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 63.9 bits (154), Expect = 6.34e-10
Identity = 37/60 (61.67%), Postives = 42/60 (70.00%), Query Frame = 0
Query: 1 MSFEVARRRIVSRGSNLFFVQYLQGIRPSISAVGVCSNAKKEVVAFSEVLLSLCALSEDG 60
MSF V RRRI S GSNL YL+ IRPSISA V + A+KEVV FS+V +SLC LS G
Sbjct: 75 MSFGVVRRRIASGGSNL----YLRAIRPSISAGRVRTVAEKEVVTFSDVFVSLCTLSGGG 130
BLAST of IVF0015468 vs. NCBI nr
Match:
KAA0025144.1 (dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex 1 [Cucumis melo var. makuwa])
HSP 1 Score: 58.5 bits (140), Expect = 5.03e-08
Identity = 31/44 (70.45%), Postives = 34/44 (77.27%), Query Frame = 0
Query: 1 MSFEVARRRIVSRGSNLFFVQYLQGIRPSISAVGVCSNAKKEVV 44
MSF V RRRI S GSNLF QYLQGIRPSISA V S A+KE++
Sbjct: 1 MSFGVVRRRIASGGSNLFSAQYLQGIRPSISAGRVRSVAEKEIL 44
BLAST of IVF0015468 vs. NCBI nr
Match:
XP_008447731.1 (PREDICTED: dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex 1, mitochondrial [Cucumis melo])
HSP 1 Score: 58.5 bits (140), Expect = 5.03e-08
Identity = 31/44 (70.45%), Postives = 34/44 (77.27%), Query Frame = 0
Query: 1 MSFEVARRRIVSRGSNLFFVQYLQGIRPSISAVGVCSNAKKEVV 44
MSF V RRRI S GSNLF QYLQGIRPSISA V S A+KE++
Sbjct: 1 MSFGVVRRRIASGGSNLFSAQYLQGIRPSISAGRVRSVAEKEIL 44
BLAST of IVF0015468 vs. NCBI nr
Match:
TYK23103.1 (dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex 1 [Cucumis melo var. makuwa])
HSP 1 Score: 58.5 bits (140), Expect = 5.03e-08
Identity = 31/44 (70.45%), Postives = 34/44 (77.27%), Query Frame = 0
Query: 1 MSFEVARRRIVSRGSNLFFVQYLQGIRPSISAVGVCSNAKKEVV 44
MSF V RRRI S GSNLF QYLQGIRPSISA V S A+KE++
Sbjct: 1 MSFGVVRRRIASGGSNLFSAQYLQGIRPSISAGRVRSVAEKEIL 44
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A0A0K780 | 4.9e-14 | 78.69 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G212630 PE=4 SV=1 | [more] |
A0A5A7SHN5 | 2.4e-05 | 70.45 | Dihydrolipoyllysine-residue succinyltransferase OS=Cucumis melo var. makuwa OX=1... | [more] |
A0A5D3DHP6 | 2.4e-05 | 70.45 | Dihydrolipoyllysine-residue succinyltransferase OS=Cucumis melo var. makuwa OX=1... | [more] |
A0A1S3BHH7 | 2.4e-05 | 70.45 | Dihydrolipoyllysine-residue succinyltransferase OS=Cucumis melo OX=3656 GN=LOC10... | [more] |
A0A6J1IE26 | 7.1e-05 | 68.18 | Dihydrolipoyllysine-residue succinyltransferase OS=Cucurbita maxima OX=3661 GN=L... | [more] |
Match Name | E-value | Identity | Description | |
KAG6585877.1 | 6.32e-10 | 61.67 | Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehy... | [more] |
KAG6607794.1 | 6.34e-10 | 61.67 | Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehy... | [more] |
KAA0025144.1 | 5.03e-08 | 70.45 | dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehy... | [more] |
XP_008447731.1 | 5.03e-08 | 70.45 | PREDICTED: dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglu... | [more] |
TYK23103.1 | 5.03e-08 | 70.45 | dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehy... | [more] |
Match Name | E-value | Identity | Description | |