IVF0013250 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTTGCCCTTACGTCGATGCTGGTATGGCGACAGCCGACGCCGCACCACCGAGGCAGAGACGGCCGATGGCTGGCCGTGCACGCGGAACCCAGAAGAAGAACGGTCGGGGACGGCTGTCGCTGTGGCTTCCCGTCGGTGAGGTGCGGATGGAGAAAAACGGGCGGTCGTCGAAGGCGTACGGATGGCGTCTGTGTTCGTCGGGTGAAGAAGCCGAAGAGAAGAAGAAGAAGAAGAGATGGCGGCGGCGCTTCGTGAAGGCGGTGGAGAAGGAAGCCTCGGGGTCGTGCGGCGGCGCAAGGAAGAAAGCGAAAATGGATGGGCTTGCGCGGTAG ATGGCTTGCCCTTACGTCGATGCTGGTATGGCGACAGCCGACGCCGCACCACCGAGGCAGAGACGGCCGATGGCTGGCCGTGCACGCGGAACCCAGAAGAAGAACGGTCGGGGACGGCTGTCGCTGTGGCTTCCCGTCGGTGAGGTGCGGATGGAGAAAAACGGGCGGTCGTCGAAGGCGTACGGATGGCGTCTGTGTTCGTCGGGTGAAGAAGCCGAAGAGAAGAAGAAGAAGAAGAGATGGCGGCGGCGCTTCGTGAAGGCGGTGGAGAAGGAAGCCTCGGGGTCGTGCGGCGGCGCAAGGAAGAAAGCGAAAATGGATGGGCTTGCGCGGTAG ATGGCTTGCCCTTACGTCGATGCTGGTATGGCGACAGCCGACGCCGCACCACCGAGGCAGAGACGGCCGATGGCTGGCCGTGCACGCGGAACCCAGAAGAAGAACGGTCGGGGACGGCTGTCGCTGTGGCTTCCCGTCGGTGAGGTGCGGATGGAGAAAAACGGGCGGTCGTCGAAGGCGTACGGATGGCGTCTGTGTTCGTCGGGTGAAGAAGCCGAAGAGAAGAAGAAGAAGAAGAGATGGCGGCGGCGCTTCGTGAAGGCGGTGGAGAAGGAAGCCTCGGGGTCGTGCGGCGGCGCAAGGAAGAAAGCGAAAATGGATGGGCTTGCGCGGTAG MACPYVDAGMATADAAPPRQRRPMAGRARGTQKKNGRGRLSLWLPVGEVRMEKNGRSSKAYGWRLCSSGEEAEEKKKKKRWRRRFVKAVEKEASGSCGGARKKAKMDGLAR Homology
BLAST of IVF0013250 vs. ExPASy TrEMBL
Match: A0A5A7VN13 (NBS-LRR type resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold138G001400 PE=4 SV=1) HSP 1 Score: 70.5 bits (171), Expect = 5.1e-09 Identity = 37/44 (84.09%), Postives = 38/44 (86.36%), Query Frame = 0
BLAST of IVF0013250 vs. ExPASy TrEMBL
Match: A0A5A7VD11 (Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold21G002580 PE=4 SV=1) HSP 1 Score: 68.9 bits (167), Expect = 1.5e-08 Identity = 33/34 (97.06%), Postives = 34/34 (100.00%), Query Frame = 0
BLAST of IVF0013250 vs. ExPASy TrEMBL
Match: A0A5D3D2P4 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold306G002650 PE=4 SV=1) HSP 1 Score: 53.9 bits (128), Expect = 4.9e-04 Identity = 28/38 (73.68%), Postives = 29/38 (76.32%), Query Frame = 0
BLAST of IVF0013250 vs. NCBI nr
Match: KAA0067956.1 (NBS-LRR type resistance protein [Cucumis melo var. makuwa]) HSP 1 Score: 68.2 bits (165), Expect = 8.48e-12 Identity = 37/44 (84.09%), Postives = 38/44 (86.36%), Query Frame = 0
BLAST of IVF0013250 vs. NCBI nr
Match: KAA0066232.1 (transposase [Cucumis melo var. makuwa]) HSP 1 Score: 66.2 bits (160), Expect = 3.70e-11 Identity = 33/34 (97.06%), Postives = 34/34 (100.00%), Query Frame = 0
BLAST of IVF0013250 vs. NCBI nr
Match: TYK17960.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]) HSP 1 Score: 51.6 bits (122), Expect = 5.25e-05 Identity = 28/38 (73.68%), Postives = 29/38 (76.32%), Query Frame = 0
BLAST of IVF0013250 vs. NCBI nr
Match: KAA0031930.1 (NBS-LRR type resistance protein [Cucumis melo var. makuwa]) HSP 1 Score: 48.9 bits (115), Expect = 4.24e-04 Identity = 30/42 (71.43%), Postives = 31/42 (73.81%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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