IVF0012299 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTGACGTATGCATTGCGTTGGAAAAAAGAGGCATTCCCGACGCCGCAAGGTGCATCGACATAAGGTGCGTCGGGAAAGAGGTATTCCCAATGCCACCTTTGTCGACGTGTATATTGGCGTCGGGAGAAGCTTTCCCGACGTCGTACCAACACGGCGTTGGGAAAGCCTCTCCCGACGTTCTTTTTGACGTCGTGATGTACGTCGGGATATTCTTTCTCGACGTATTTTTCATTTTCGCCGATGTTTTTTGGCATCGGGAGTACCTCGTCTCTTGTAGTGCTTCTTATCTATAG ATGGCTGACGTATGCATTGCGTTGGAAAAAAGAGGCATTCCCGACGCCGCAAGGTGCATCGACATAAGGTGCGTCGGGAAAGAGGTATTCCCAATGCCACCTTTGTCGACGTGTATATTGGCGTCGGGAGAAGCTTTCCCGACGTCGTACCAACACGGCGTTGGGAAAGCCTCTCCCGACGTTCTTTTTGACGTCGTGATGTACGTCGGGATATTCTTTCTCGACGTATTTTTCATTTTCGCCGATGTTTTTTGGCATCGGGAGTACCTCGTCTCTTGTAGTGCTTCTTATCTATAG ATGGCTGACGTATGCATTGCGTTGGAAAAAAGAGGCATTCCCGACGCCGCAAGGTGCATCGACATAAGGTGCGTCGGGAAAGAGGTATTCCCAATGCCACCTTTGTCGACGTGTATATTGGCGTCGGGAGAAGCTTTCCCGACGTCGTACCAACACGGCGTTGGGAAAGCCTCTCCCGACGTTCTTTTTGACGTCGTGATGTACGTCGGGATATTCTTTCTCGACGTATTTTTCATTTTCGCCGATGTTTTTTGGCATCGGGAGTACCTCGTCTCTTGTAGTGCTTCTTATCTATAG MADVCIALEKRGIPDAARCIDIRCVGKEVFPMPPLSTCILASGEAFPTSYQHGVGKASPDVLFDVVMYVGIFFLDVFFIFADVFWHREYLVSCSASYL Homology
BLAST of IVF0012299 vs. ExPASy TrEMBL
Match: A0A5D3DDA9 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold275G00450 PE=4 SV=1) HSP 1 Score: 85.5 bits (210), Expect = 1.3e-13 Identity = 44/80 (55.00%), Postives = 51/80 (63.75%), Query Frame = 0
BLAST of IVF0012299 vs. ExPASy TrEMBL
Match: A0A5A7T2X5 (NBS-LRR type resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold56G001030 PE=4 SV=1) HSP 1 Score: 81.6 bits (200), Expect = 1.9e-12 Identity = 39/55 (70.91%), Postives = 42/55 (76.36%), Query Frame = 0
BLAST of IVF0012299 vs. ExPASy TrEMBL
Match: A0A5D3DH90 (Zinc finger protein ZPR1-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold142G00380 PE=4 SV=1) HSP 1 Score: 80.5 bits (197), Expect = 4.3e-12 Identity = 36/51 (70.59%), Postives = 39/51 (76.47%), Query Frame = 0
BLAST of IVF0012299 vs. ExPASy TrEMBL
Match: A0A5A7U9S0 (Tetraspanin-3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold60G003740 PE=4 SV=1) HSP 1 Score: 67.0 bits (162), Expect = 5.0e-08 Identity = 42/79 (53.16%), Postives = 44/79 (55.70%), Query Frame = 0
BLAST of IVF0012299 vs. ExPASy TrEMBL
Match: A0A5D3CLR9 (Tetraspanin-3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold769G00500 PE=4 SV=1) HSP 1 Score: 63.9 bits (154), Expect = 4.2e-07 Identity = 41/79 (51.90%), Postives = 43/79 (54.43%), Query Frame = 0
BLAST of IVF0012299 vs. NCBI nr
Match: TYK21553.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 85.5 bits (210), Expect = 7.23e-17 Identity = 44/80 (55.00%), Postives = 51/80 (63.75%), Query Frame = 0
BLAST of IVF0012299 vs. NCBI nr
Match: KAA0035927.1 (NBS-LRR type resistance protein [Cucumis melo var. makuwa]) HSP 1 Score: 82.0 bits (201), Expect = 7.56e-17 Identity = 39/55 (70.91%), Postives = 42/55 (76.36%), Query Frame = 0
BLAST of IVF0012299 vs. NCBI nr
Match: KAA0049798.1 (zinc finger protein ZPR1-like protein [Cucumis melo var. makuwa] >TYK23067.1 zinc finger protein ZPR1-like protein [Cucumis melo var. makuwa]) HSP 1 Score: 80.9 bits (198), Expect = 2.25e-16 Identity = 36/51 (70.59%), Postives = 39/51 (76.47%), Query Frame = 0
BLAST of IVF0012299 vs. NCBI nr
Match: KAA0051920.1 (tetraspanin-3-like [Cucumis melo var. makuwa]) HSP 1 Score: 67.0 bits (162), Expect = 8.14e-11 Identity = 42/79 (53.16%), Postives = 44/79 (55.70%), Query Frame = 0
BLAST of IVF0012299 vs. NCBI nr
Match: TYK12242.1 (tetraspanin-3-like [Cucumis melo var. makuwa]) HSP 1 Score: 63.9 bits (154), Expect = 1.16e-09 Identity = 41/79 (51.90%), Postives = 43/79 (54.43%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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